DK955147
Clone id TST39A01NGRL0022_F04
Library
Length 610
Definition Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0022_F04. 5' end sequence.
Accession
Tissue type prothallia with plantlets
Developmental stage gametophytes with sporophytes
Contig ID -
Sequence
AGCCAAGGTTGCAGCTATTCAGGATTCGCCACCTCTTAGGAACGTGTATGATATGCGTAG
TTTCTTGGGACTATGTTCTTAGTACAAAAGGTTCATTTTCAGATTTGCAAAAATTGCAGT
AGCTTTGCATCATTTGACCAAGAAAGGTGTTCCGTTTTCTTGGAAACAGACACAGATTAC
AGCTTTTGAGCGTCTGAAAGAAAAGCTTATGACTGGACCAATCTTTGTGCTTCCCAATTT
GCAAAAACCTTTTCAAGTGCATTGTGATGCATGTGGTAGCAGTTTAGGACGAGTTTTACA
ACAGGATGGTCATGTGATAGCCTATGAGAGCATATTATTTTCTAAGGCTGAGATAGTTGC
ACAAATTTATGAGAAGGAACTTCTTGGAGTAATTCATGCATTATCTACTTGGAAACATTA
CCTTCTTGTAGCTGATTTCATAGGTCATACTGATCATGAGAGTTTGAGATACTTCTTGTC
ACAACCGAAGCTGTCAGACAAACAGATGAGATGGGCAAATTTTTGTCTCTCTTTCATTTT
CAAATTGTTTATGTAGAGGGAAAGGAGAACGTGATTGCAGATGCCTTATCTCGCAAACCA
CAAATTCCAG
■■Homology search results ■■ -
sp_hit_id P20825
Definition sp|P20825|POL2_DROME Retrovirus-related Pol polyprotein from transposon 297 OS=Drosophila melanogaster
Align length 182
Score (bit) 101.0
E-value 3.0e-25
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK955147|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0022_F04, 5'
(610 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|P20825|POL2_DROME Retrovirus-related Pol polyprotein from tra... 101 3e-25
sp|P04323|POL3_DROME Retrovirus-related Pol polyprotein from tra... 98 1e-24
sp|Q8I7P9|POL5_DROME Retrovirus-related Pol polyprotein from tra... 91 3e-21
sp|P10394|POL4_DROME Retrovirus-related Pol polyprotein from tra... 84 9e-19
sp|P10401|POLY_DROME Retrovirus-related Pol polyprotein from tra... 90 8e-18
sp|Q9UR07|RTF23_SCHPO Retrotransposable element Tf2 155 kDa prot... 79 2e-14
sp|Q9C0R2|RTF22_SCHPO Retrotransposable element Tf2 155 kDa prot... 79 2e-14
sp|Q05654|RTF21_SCHPO Retrotransposable element Tf2 155 kDa prot... 79 2e-14
sp|Q7LHG5|YI31B_YEAST Transposon Ty3-I Gag-Pol polyprotein OS=Sa... 71 5e-12
sp|Q99315|YG31B_YEAST Transposon Ty3-G Gag-Pol polyprotein OS=Sa... 71 5e-12
sp|P31792|POL_FENV1 Pol polyprotein (Fragment) OS=Feline endogen... 67 6e-11
sp|P09523|POL_FMVD Enzymatic polyprotein OS=Figwort mosaic virus... 60 8e-11
sp|P10272|POL_BAEVM Pol polyprotein OS=Baboon endogenous virus (... 65 3e-10
sp|Q9TTC1|POL_KORV Pro-Pol polyprotein OS=Koala retrovirus GN=pr... 63 1e-09
sp|P11227|POL_MLVRD Pol polyprotein OS=Radiation murine leukemia... 61 4e-09
sp|P21414|POL_GALV Pol polyprotein OS=Gibbon ape leukemia virus ... 61 4e-09
sp|P03355|POL_MLVMO Pol polyprotein OS=Moloney murine leukemia v... 59 1e-08
sp|P03356|POL_MLVAV Pol polyprotein OS=AKV murine leukemia virus... 59 1e-08
sp|P26808|POL_MLVFP Pol polyprotein OS=Friend murine leukemia vi... 59 2e-08
sp|P26809|POL_MLVFF Pol polyprotein OS=Friend murine leukemia vi... 59 2e-08
sp|P26810|POL_MLVF5 Pol polyprotein OS=Friend murine leukemia vi... 59 2e-08
sp|P92523|M860_ARATH Uncharacterized mitochondrial protein AtMg0... 56 1e-07
sp|P05400|POL_CERV Enzymatic polyprotein OS=Carnation etched rin... 51 4e-06
sp|Q7M732|RTL1_MOUSE Retrotransposon-like protein 1 OS=Mus muscu... 49 2e-05
sp|Q02964|POL_CAMVE Enzymatic polyprotein OS=Cauliflower mosaic ... 46 1e-04
sp|P03556|POL_CAMVD Enzymatic polyprotein OS=Cauliflower mosaic ... 46 1e-04
sp|P03555|POL_CAMVC Enzymatic polyprotein OS=Cauliflower mosaic ... 46 1e-04
sp|P03554|POL_CAMVS Enzymatic polyprotein OS=Cauliflower mosaic ... 46 2e-04
sp|Q52QI2|RTL1_BOVIN Retrotransposon-like protein 1 OS=Bos tauru... 45 3e-04
sp|Q00962|POL_CAMVN Enzymatic polyprotein OS=Cauliflower mosaic ... 45 4e-04

>sp|P20825|POL2_DROME Retrovirus-related Pol polyprotein from
transposon 297 OS=Drosophila melanogaster GN=pol PE=4
SV=1
Length = 1059

Score = 101 bits (251), Expect(2) = 3e-25
Identities = 63/182 (34%), Positives = 97/182 (53%), Gaps = 1/182 (0%)
Frame = +2

Query: 5 KVAAIQDSPPLRNVYDMRSFLGLCS*YKRFIFRFAKIAVALHHLTKKGVPFSWKQTQ-IT 181
KV AI P ++R+FLGL Y++FI +A IA + KK ++ + I
Sbjct: 425 KVKAIVSYPIPTKDKEIRAFLGLTGYYRKFIPNYADIAKPMTSCLKKRTKIDTQKLEYIE 484

Query: 182 AFERLKEKLMTGPIFVLPNLQKPFQVHCDACGSSLGRVLQQDGHVIAYESILFSKAEIVA 361
AFE+LK ++ PI LP+ +K F + DA +LG VL Q+GH I++ S + E+
Sbjct: 485 AFEKLKALIIRDPILQLPDFEKKFVLTTDASNLALGAVLSQNGHPISFISRTLNDHELNY 544

Query: 362 QIYEKELLGVIHALSTWKHYLLVADFIGHTDHESLRYFLSQPKLSDKQMRWANFCLSFIF 541
EKELL ++ A T++HYLL F+ +DH+ LR+ + + K RW + F
Sbjct: 545 SAIEKELLAIVWATKTFRHYLLGRQFLIASDHQPLRWLHNLKEPGAKLERWRVRLSEYQF 604

Query: 542 KL 547
K+
Sbjct: 605 KI 606



Score = 34.3 bits (77), Expect(2) = 3e-25
Identities = 15/24 (62%), Positives = 20/24 (83%)
Frame = +1

Query: 523 LSLFHFQIVYVEGKENVIADALSR 594
LS + F+I Y++GKEN +ADALSR
Sbjct: 599 LSEYQFKIDYIKGKENSVADALSR 622


>sp|P04323|POL3_DROME Retrovirus-related Pol polyprotein from
transposon 17.6 OS=Drosophila melanogaster GN=pol PE=4
SV=1
Length = 1058

Score = 97.8 bits (242), Expect(2) = 1e-24
Identities = 59/171 (34%), Positives = 89/171 (52%), Gaps = 1/171 (0%)
Frame = +2

Query: 5 KVAAIQDSPPLRNVYDMRSFLGLCS*YKRFIFRFAKIAVALHHLTKKGVPFSWKQTQI-T 181
K+ AIQ P ++++FLGL Y++FI FA IA + KK + + +
Sbjct: 426 KIEAIQKYPIPTKPKEIKAFLGLTGYYRKFIPNFADIAKPMTKCLKKNMKIDTTNPEYDS 485

Query: 182 AFERLKEKLMTGPIFVLPNLQKPFQVHCDACGSSLGRVLQQDGHVIAYESILFSKAEIVA 361
AF++LK + PI +P+ K F + DA +LG VL QDGH ++Y S ++ EI
Sbjct: 486 AFKKLKYLISEDPILKVPDFTKKFTLTTDASDVALGAVLSQDGHPLSYISRTLNEHEINY 545

Query: 362 QIYEKELLGVIHALSTWKHYLLVADFIGHTDHESLRYFLSQPKLSDKQMRW 514
EKELL ++ A T++HYLL F +DH+ L + + K RW
Sbjct: 546 STIEKELLAIVWATKTFRHYLLGRHFEISSDHQPLSWLYRMKDPNSKLTRW 596



Score = 35.4 bits (80), Expect(2) = 1e-24
Identities = 16/24 (66%), Positives = 19/24 (79%)
Frame = +1

Query: 523 LSLFHFQIVYVEGKENVIADALSR 594
LS F F I Y++GKEN +ADALSR
Sbjct: 600 LSEFDFDIKYIKGKENCVADALSR 623


>sp|Q8I7P9|POL5_DROME Retrovirus-related Pol polyprotein from
transposon opus OS=Drosophila melanogaster GN=pol PE=4
SV=1
Length = 1003

Score = 91.3 bits (225), Expect(2) = 3e-21
Identities = 63/186 (33%), Positives = 92/186 (49%), Gaps = 16/186 (8%)
Frame = +2

Query: 5 KVAAIQDSPPLRNVYDMRSFLGLCS*YKRFIFRFAKIAVALHHLTK-----------KGV 151
KV AI + PP +V +++ FLG+ S Y++FI +AK+A L +LT+ V
Sbjct: 342 KVRAISEMPPPTSVKELKRFLGMTSYYRKFIQDYAKVAKPLTNLTRGLYANIKSSQSSKV 401

Query: 152 PFSWKQTQITAFERLKEKLMTGPIFVLPNLQKPFQVHCDACGSSLGRVLQQD----GHVI 319
P + +T + +F LK L + I P KPF + DA ++G VL QD I
Sbjct: 402 PITLDETALQSFNDLKSILCSSEILAFPCFTKPFHLTTDASNWAIGAVLSQDDQGRDRPI 461

Query: 320 AYESILFSKAEIVAQIYEKELLGVIHALSTWKHYLLVADFIG-HTDHESLRYFLSQPKLS 496
AY S +K E EKE+L +I +L + YL A I +TDH+ L + L +
Sbjct: 462 AYISRSLNKTEENYATIEKEMLAIIWSLDNLRAYLYGAGTIKVYTDHQPLTFALGNRNFN 521

Query: 497 DKQMRW 514
K RW
Sbjct: 522 AKLKRW 527



Score = 30.8 bits (68), Expect(2) = 3e-21
Identities = 12/23 (52%), Positives = 18/23 (78%)
Frame = +1

Query: 532 FHFQIVYVEGKENVIADALSRKP 600
++ +++Y GK NV+ADALSR P
Sbjct: 534 YNCELIYKPGKSNVVADALSRIP 556


>sp|P10394|POL4_DROME Retrovirus-related Pol polyprotein from
transposon 412 OS=Drosophila melanogaster GN=POL PE=4
SV=1
Length = 1237

Score = 83.6 bits (205), Expect(2) = 9e-19
Identities = 57/173 (32%), Positives = 79/173 (45%), Gaps = 4/173 (2%)
Frame = +2

Query: 5 KVAAIQDSPPLRNVYDMRSFLGLCS*YKRFIFRFAKIAVALHHLTKKGVPFSWKQTQITA 184
K IQ+ P + R F+ C+ Y+RFI FA + + L KK VPF W A
Sbjct: 534 KYDVIQNYPVPHDADSARRFVAFCNYYRRFIKNFADYSRHITRLCKKNVPFEWTDECQKA 593

Query: 185 FERLKEKLMTGPIFVLPNLQKPFQVHCDACGSSLGRVLQQ--DGH--VIAYESILFSKAE 352
F LK +L+ + P+ K F + DA + G VL Q +GH +AY S F+K E
Sbjct: 594 FIHLKSQLINPTLLQYPDFSKEFCITTDASKQACGAVLTQNHNGHQLPVAYASRAFTKGE 653

Query: 353 IVAQIYEKELLGVIHALSTWKHYLLVADFIGHTDHESLRYFLSQPKLSDKQMR 511
E+EL + A+ ++ Y+ F TDH L Y S S K R
Sbjct: 654 SNKSTTEQELAAIHWAIIHFRPYIYGKHFTVKTDHRPLTYLFSMVNPSSKLTR 706



Score = 30.0 bits (66), Expect(2) = 9e-19
Identities = 12/24 (50%), Positives = 19/24 (79%)
Frame = +1

Query: 523 LSLFHFQIVYVEGKENVIADALSR 594
L ++F + Y++GK+N +ADALSR
Sbjct: 711 LEEYNFTVEYLKGKDNHVADALSR 734


>sp|P10401|POLY_DROME Retrovirus-related Pol polyprotein from
transposon gypsy OS=Drosophila melanogaster GN=pol PE=4
SV=1
Length = 1035

Score = 90.1 bits (222), Expect = 8e-18
Identities = 65/196 (33%), Positives = 100/196 (51%), Gaps = 14/196 (7%)
Frame = +2

Query: 5 KVAAIQDSPPLRNVYDMRSFLGLCS*YKRFIFRFAKIAVAL------------HHLTKKG 148
KV AIQ+ P VY +RSFLGL S Y+ FI FA IA + H++KK
Sbjct: 401 KVKAIQEYPEPDCVYKVRSFLGLASYYRVFIKDFAAIARPITDILKGENGSVSKHMSKK- 459

Query: 149 VPFSWKQTQITAFERLKEKLMTGPIFV-LPNLQKPFQVHCDACGSSLGRVLQQDGHVIAY 325
+P + +TQ AF+RL+ L + + + P+ +KPF + DA S +G VL Q+G I
Sbjct: 460 IPVEFNETQRNAFQRLRNILASEDVILKYPDFKKPFDLTTDASASGIGAVLSQEGRPITM 519

Query: 326 ESILFSKAEIVAQIYEKELLGVIHALSTWKHYLLVADFIG-HTDHESLRYFLSQPKLSDK 502
S + E E+ELL ++ AL +++L + I TDH+ L + ++ + K
Sbjct: 520 ISRTLKQPEQNYATNERELLAIVWALGKLQNFLYGSREINIFTDHQPLTFAVADRNTNAK 579

Query: 503 QMRWANFCLSFIFKLF 550
RW ++ K+F
Sbjct: 580 IKRWKSYIDQHNAKVF 595


>sp|Q9UR07|RTF23_SCHPO Retrotransposable element Tf2 155 kDa protein
type 3 OS=Schizosaccharomyces pombe GN=Tf2-11 PE=4 SV=1
Length = 1333

Score = 79.0 bits (193), Expect = 2e-14
Identities = 52/179 (29%), Positives = 90/179 (50%), Gaps = 9/179 (5%)
Frame = +2

Query: 38 RNVYDMRSFLGLCS*YKRFIFRFAKIAVALHHLTKKGVPFSWKQTQITAFERLKEKLMTG 217
+N ++R FLG + ++FI + +++ L++L KK V + W TQ A E +K+ L++
Sbjct: 637 KNRKELRQFLGSVNYLRKFIPKTSQLTHPLNNLLKKDVRWKWTPTQTQAIENIKQCLVSP 696

Query: 218 PIFVLPNLQKPFQVHCDACGSSLGRVLQQDG-----HVIAYESILFSKAEIVAQIYEKEL 382
P+ + K + DA ++G VL Q + + Y S SKA++ + +KE+
Sbjct: 697 PVLRHFDFSKKILLETDASDVAVGAVLSQKHDDDKYYPVGYYSAKMSKAQLNYSVSDKEM 756

Query: 383 LGVIHALSTWKHYL--LVADFIGHTDHESL--RYFLSQPKLSDKQMRWANFCLSFIFKL 547
L +I +L W+HYL + F TDH +L R + + RW F F F++
Sbjct: 757 LAIIKSLKHWRHYLESTIEPFKILTDHRNLIGRITNESEPENKRLARWQLFLQDFNFEI 815


>sp|Q9C0R2|RTF22_SCHPO Retrotransposable element Tf2 155 kDa protein
type 2 OS=Schizosaccharomyces pombe GN=Tf2-7 PE=2 SV=1
Length = 1333

Score = 79.0 bits (193), Expect = 2e-14
Identities = 52/179 (29%), Positives = 90/179 (50%), Gaps = 9/179 (5%)
Frame = +2

Query: 38 RNVYDMRSFLGLCS*YKRFIFRFAKIAVALHHLTKKGVPFSWKQTQITAFERLKEKLMTG 217
+N ++R FLG + ++FI + +++ L++L KK V + W TQ A E +K+ L++
Sbjct: 637 KNRKELRQFLGSVNYLRKFIPKTSQLTHPLNNLLKKDVRWKWTPTQTQAIENIKQCLVSP 696

Query: 218 PIFVLPNLQKPFQVHCDACGSSLGRVLQQDG-----HVIAYESILFSKAEIVAQIYEKEL 382
P+ + K + DA ++G VL Q + + Y S SKA++ + +KE+
Sbjct: 697 PVLRHFDFSKKILLETDASDVAVGAVLSQKHDDDKYYPVGYYSAKMSKAQLNYSVSDKEM 756

Query: 383 LGVIHALSTWKHYL--LVADFIGHTDHESL--RYFLSQPKLSDKQMRWANFCLSFIFKL 547
L +I +L W+HYL + F TDH +L R + + RW F F F++
Sbjct: 757 LAIIKSLKHWRHYLESTIEPFKILTDHRNLIGRITNESEPENKRLARWQLFLQDFNFEI 815


>sp|Q05654|RTF21_SCHPO Retrotransposable element Tf2 155 kDa protein
type 1 OS=Schizosaccharomyces pombe GN=Tf2-1 PE=2 SV=1
Length = 1333

Score = 79.0 bits (193), Expect = 2e-14
Identities = 52/179 (29%), Positives = 90/179 (50%), Gaps = 9/179 (5%)
Frame = +2

Query: 38 RNVYDMRSFLGLCS*YKRFIFRFAKIAVALHHLTKKGVPFSWKQTQITAFERLKEKLMTG 217
+N ++R FLG + ++FI + +++ L++L KK V + W TQ A E +K+ L++
Sbjct: 637 KNRKELRQFLGSVNYLRKFIPKTSQLTHPLNNLLKKDVRWKWTPTQTQAIENIKQCLVSP 696

Query: 218 PIFVLPNLQKPFQVHCDACGSSLGRVLQQDG-----HVIAYESILFSKAEIVAQIYEKEL 382
P+ + K + DA ++G VL Q + + Y S SKA++ + +KE+
Sbjct: 697 PVLRHFDFSKKILLETDASDVAVGAVLSQKHDDDKYYPVGYYSAKMSKAQLNYSVSDKEM 756

Query: 383 LGVIHALSTWKHYL--LVADFIGHTDHESL--RYFLSQPKLSDKQMRWANFCLSFIFKL 547
L +I +L W+HYL + F TDH +L R + + RW F F F++
Sbjct: 757 LAIIKSLKHWRHYLESTIEPFKILTDHRNLIGRITNESEPENKRLARWQLFLQDFNFEI 815


>sp|Q7LHG5|YI31B_YEAST Transposon Ty3-I Gag-Pol polyprotein
OS=Saccharomyces cerevisiae GN=TY3B-I PE=3 SV=2
Length = 1498

Score = 70.9 bits (172), Expect = 5e-12
Identities = 57/189 (30%), Positives = 90/189 (47%), Gaps = 8/189 (4%)
Frame = +2

Query: 5 KVAAIQDSPPLRNVYDMRSFLGLCS*YKRFIFRFAKIA--VALHHLTKKGVPFSWKQTQI 178
K AAI+D P + V + FLG+ + Y+RFI +KIA + L K W + Q
Sbjct: 834 KCAAIRDFPTPKTVKQAQRFLGMINYYRRFIPNCSKIAQPIQLFICDKS----QWTEKQD 889

Query: 179 TAFERLKEKLMTGPIFVLPNLQKPFQVHCDACGSSLGRVLQQDGH------VIAYESILF 340
A E+LK L P+ V N + +++ DA +G VL++ + V+ Y S
Sbjct: 890 KAIEKLKAALCNSPVLVPFNNKANYRLTTDASKDGIGAVLEEVDNKNKLVGVVGYFSKSL 949

Query: 341 SKAEIVAQIYEKELLGVIHALSTWKHYLLVADFIGHTDHESLRYFLSQPKLSDKQMRWAN 520
A+ E ELLG+I AL +++ L F TDH SL ++ + + + RW +
Sbjct: 950 ESAQKNYPAGELELLGIIKALHHFRYMLHGKHFTLRTDHISLLSLQNKNEPARRVQRWLD 1009

Query: 521 FCLSFIFKL 547
++ F L
Sbjct: 1010 DLATYDFTL 1018


>sp|Q99315|YG31B_YEAST Transposon Ty3-G Gag-Pol polyprotein
OS=Saccharomyces cerevisiae GN=TY3B-G PE=1 SV=3
Length = 1547

Score = 70.9 bits (172), Expect = 5e-12
Identities = 56/189 (29%), Positives = 91/189 (48%), Gaps = 8/189 (4%)
Frame = +2

Query: 5 KVAAIQDSPPLRNVYDMRSFLGLCS*YKRFIFRFAKIA--VALHHLTKKGVPFSWKQTQI 178
K AAI+D P + V + FLG+ + Y+RFI +KIA + L K W + Q
Sbjct: 808 KCAAIRDFPTPKTVKQAQRFLGMINYYRRFIPNCSKIAQPIQLFICDKS----QWTEKQD 863

Query: 179 TAFERLKEKLMTGPIFVLPNLQKPFQVHCDACGSSLGRVLQQDGH------VIAYESILF 340
A ++LK+ L P+ V N + +++ DA +G VL++ + V+ Y S
Sbjct: 864 KAIDKLKDALCNSPVLVPFNNKANYRLTTDASKDGIGAVLEEVDNKNKLVGVVGYFSKSL 923

Query: 341 SKAEIVAQIYEKELLGVIHALSTWKHYLLVADFIGHTDHESLRYFLSQPKLSDKQMRWAN 520
A+ E ELLG+I AL +++ L F TDH SL ++ + + + RW +
Sbjct: 924 ESAQKNYPAGELELLGIIKALHHFRYMLHGKHFTLRTDHISLLSLQNKNEPARRVQRWLD 983

Query: 521 FCLSFIFKL 547
++ F L
Sbjct: 984 DLATYDFTL 992


tr_hit_id Q0DJL7
Definition tr|Q0DJL7|Q0DJL7_ORYSJ Os05g0263200 protein OS=Oryza sativa subsp. japonica
Align length 178
Score (bit) 162.0
E-value 1.0e-42
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK955147|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0022_F04, 5'
(610 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|Q0DJL7|Q0DJL7_ORYSJ Os05g0263200 protein OS=Oryza sativa subs... 162 1e-42
tr|A4K7M3|A4K7M3_ORYSJ Putative polyprotein OS=Oryza sativa subs... 162 1e-42
tr|Q7XRT3|Q7XRT3_ORYSJ OSJNBa0042F21.10 protein OS=Oryza sativa ... 158 9e-41
tr|Q6UUN7|Q6UUN7_ORYSJ Putative gag-pol polyprotein OS=Oryza sat... 158 9e-41
tr|Q94I07|Q94I07_ORYSA Putative retroelement OS=Oryza sativa GN=... 157 1e-40
tr|Q7XG23|Q7XG23_ORYSJ Retrotransposon protein, putative, Ty3-gy... 157 1e-40
tr|Q7XRN3|Q7XRN3_ORYSJ OSJNBa0024J22.19 protein OS=Oryza sativa ... 157 1e-40
tr|Q01KW5|Q01KW5_ORYSA H0211A12.9 protein OS=Oryza sativa GN=H02... 157 1e-40
tr|Q7XR16|Q7XR16_ORYSJ OSJNBb0022F23.14 protein OS=Oryza sativa ... 157 2e-40
tr|B5G4Y0|B5G4Y0_TRIMO Putative gag-pol polyprotein OS=Triticum ... 155 3e-40
tr|Q7XRJ2|Q7XRJ2_ORYSJ OSJNBa0042D13.18 protein OS=Oryza sativa ... 155 5e-40
tr|Q6UUM9|Q6UUM9_ORYSJ Putative gag-pol polyprotein OS=Oryza sat... 156 1e-39
tr|Q2QRT1|Q2QRT1_ORYSJ Retrotransposon protein, putative, Ty3-gy... 155 2e-39
tr|Q8L7J3|Q8L7J3_MAIZE Gag-pol polyprotein OS=Zea mays PE=4 SV=1 153 3e-39
tr|Q6UUJ1|Q6UUJ1_ORYSJ Putative gag-pol polyprotein (Putative po... 152 4e-39
tr|Q93WG4|Q93WG4_ORYSA Putative retroelement OS=Oryza sativa GN=... 152 5e-39
tr|Q7XFI5|Q7XFI5_ORYSJ Retrotransposon protein, putative, Ty3-gy... 152 5e-39
tr|Q94BM2|Q94BM2_HORVU Gag-pol polyprotein OS=Hordeum vulgare PE... 152 7e-39
tr|Q94BM1|Q94BM1_HORVU Gag-pol polyprotein OS=Hordeum vulgare PE... 154 7e-39
tr|Q10IG2|Q10IG2_ORYSJ Retrotransposon protein, putative, Ty3-gy... 151 7e-39
tr|Q7XWN9|Q7XWN9_ORYSJ OSJNBa0032B23.3 protein OS=Oryza sativa s... 151 9e-39
tr|Q9SLQ0|Q9SLQ0_ORYSI Gag-pol polyprotein (Fragment) OS=Oryza s... 150 1e-38
tr|Q7XWZ0|Q7XWZ0_ORYSJ OSJNBb0072N21.12 protein OS=Oryza sativa ... 150 4e-38
tr|Q8LM42|Q8LM42_ORYSJ Putative retroelement OS=Oryza sativa sub... 148 5e-38
tr|Q339J2|Q339J2_ORYSJ Retrotransposon protein, putative, Ty3-gy... 148 5e-38
tr|Q8S6I8|Q8S6I8_ORYSA Putative retroelement OS=Oryza sativa GN=... 148 5e-38
tr|Q6UUF6|Q6UUF6_ORYSJ Putative gag-pol polyprotein OS=Oryza sat... 149 7e-38
tr|Q9ZPF9|Q9ZPF9_ARATH Putative polyprotein OS=Arabidopsis thali... 145 2e-37
tr|Q9LQH2|Q9LQH2_ARATH F15O4.13 OS=Arabidopsis thaliana PE=4 SV=1 144 6e-37
tr|Q8S8M1|Q8S8M1_ARATH Putative retroelement integrase OS=Arabid... 141 1e-35

>tr|Q0DJL7|Q0DJL7_ORYSJ Os05g0263200 protein OS=Oryza sativa subsp.
japonica GN=Os05g0263200 PE=4 SV=1
Length = 1820

Score = 162 bits (409), Expect(2) = 1e-42
Identities = 78/178 (43%), Positives = 112/178 (62%)
Frame = +2

Query: 2 AKVAAIQDSPPLRNVYDMRSFLGLCS*YKRFIFRFAKIAVALHHLTKKGVPFSWKQTQIT 181
+KV AI+D P NV ++SF GL Y+RF+ F+ IA L+ LTKKGV F W + Q
Sbjct: 934 SKVKAIKDWPTPENVSQVKSFRGLAGFYRRFVRGFSTIAAPLNELTKKGVAFQWGEPQEK 993

Query: 182 AFERLKEKLMTGPIFVLPNLQKPFQVHCDACGSSLGRVLQQDGHVIAYESILFSKAEIVA 361
AF+ LK++L GP+ VLP+ K F+V CDA G +G VL Q+G +AY S A++
Sbjct: 994 AFQELKKRLSEGPLLVLPDFTKTFEVECDASGIGIGGVLMQNGQPVAYFSEKLGGAQLNY 1053

Query: 362 QIYEKELLGVIHALSTWKHYLLVADFIGHTDHESLRYFLSQPKLSDKQMRWANFCLSF 535
+Y+KEL ++ AL TW+HYL +F+ H+DHE+L+Y Q KL+ + +W F +F
Sbjct: 1054 SVYDKELYALVRALETWQHYLWPKEFVIHSDHEALKYLKGQAKLNRRHAKWVEFIETF 1111



Score = 35.4 bits (80), Expect(2) = 1e-42
Identities = 14/27 (51%), Positives = 21/27 (77%)
Frame = +1

Query: 517 KFLSLFHFQIVYVEGKENVIADALSRK 597
+F+ F + + Y +GKEN++ADALSRK
Sbjct: 1106 EFIETFPYVVKYKKGKENIVADALSRK 1132


>tr|A4K7M3|A4K7M3_ORYSJ Putative polyprotein OS=Oryza sativa subsp.
japonica PE=4 SV=1
Length = 1713

Score = 162 bits (409), Expect(2) = 1e-42
Identities = 78/178 (43%), Positives = 112/178 (62%)
Frame = +2

Query: 2 AKVAAIQDSPPLRNVYDMRSFLGLCS*YKRFIFRFAKIAVALHHLTKKGVPFSWKQTQIT 181
+KV AI+D P NV ++SF GL Y+RF+ F+ IA L+ LTKKGV F W + Q
Sbjct: 934 SKVKAIKDWPTPENVSQVKSFRGLAGFYRRFVRGFSTIAAPLNELTKKGVAFQWGEPQEK 993

Query: 182 AFERLKEKLMTGPIFVLPNLQKPFQVHCDACGSSLGRVLQQDGHVIAYESILFSKAEIVA 361
AF+ LK++L GP+ VLP+ K F+V CDA G +G VL Q+G +AY S A++
Sbjct: 994 AFQELKKRLSEGPLLVLPDFTKTFEVECDASGIGIGGVLMQNGQPVAYFSEKLGGAQLNY 1053

Query: 362 QIYEKELLGVIHALSTWKHYLLVADFIGHTDHESLRYFLSQPKLSDKQMRWANFCLSF 535
+Y+KEL ++ AL TW+HYL +F+ H+DHE+L+Y Q KL+ + +W F +F
Sbjct: 1054 SVYDKELYALVRALETWQHYLWPKEFVIHSDHEALKYLKGQAKLNRRHAKWVEFIETF 1111



Score = 35.4 bits (80), Expect(2) = 1e-42
Identities = 14/27 (51%), Positives = 21/27 (77%)
Frame = +1

Query: 517 KFLSLFHFQIVYVEGKENVIADALSRK 597
+F+ F + + Y +GKEN++ADALSRK
Sbjct: 1106 EFIETFPYVVKYKKGKENIVADALSRK 1132


>tr|Q7XRT3|Q7XRT3_ORYSJ OSJNBa0042F21.10 protein OS=Oryza sativa
subsp. japonica GN=OSJNBa0042F21.10 PE=4 SV=2
Length = 2388

Score = 158 bits (399), Expect(2) = 9e-41
Identities = 81/178 (45%), Positives = 109/178 (61%)
Frame = +2

Query: 2 AKVAAIQDSPPLRNVYDMRSFLGLCS*YKRFIFRFAKIAVALHHLTKKGVPFSWKQTQIT 181
AKV AIQ P + V +RSFLGL Y+RF+ F+ IA L+ LTKKGVPF+W +Q
Sbjct: 767 AKVEAIQSWPTPKTVSQVRSFLGLAGFYRRFVQDFSTIAAPLNALTKKGVPFTWGTSQEN 826

Query: 182 AFERLKEKLMTGPIFVLPNLQKPFQVHCDACGSSLGRVLQQDGHVIAYESILFSKAEIVA 361
AF LK+KL P+ LP+ K F++ CDA G LG VL Q+G +AY S S +
Sbjct: 827 AFHMLKDKLTHAPLLQLPDFNKTFELECDASGIGLGGVLLQEGKPVAYFSEKLSGLVLNY 886

Query: 362 QIYEKELLGVIHALSTWKHYLLVADFIGHTDHESLRYFLSQPKLSDKQMRWANFCLSF 535
Y+KEL ++ L TW+HYL +F+ H+DHESL++ SQ KL+ + +W F SF
Sbjct: 887 STYDKELYALVRTLETWQHYLWPKEFVIHSDHESLKHIRSQGKLNRRHAKWVEFIESF 944



Score = 32.7 bits (73), Expect(2) = 9e-41
Identities = 14/27 (51%), Positives = 21/27 (77%)
Frame = +1

Query: 517 KFLSLFHFQIVYVEGKENVIADALSRK 597
+F+ F + I + +GKEN+IADALSR+
Sbjct: 939 EFIESFPYVIKHKKGKENIIADALSRR 965



Score = 136 bits (342), Expect(2) = 4e-32
Identities = 73/169 (43%), Positives = 99/169 (58%)
Frame = +2

Query: 8 VAAIQDSPPLRNVYDMRSFLGLCS*YKRFIFRFAKIAVALHHLTKKGVPFSWKQTQITAF 187
V A+ D + V +RSFLGL Y+RFI F+KIA + L KK F W AF
Sbjct: 1700 VTAVTDWKQPKTVTQIRSFLGLAGYYRRFIENFSKIARPMTQLLKKEEKFVWSPQCEKAF 1759

Query: 188 ERLKEKLMTGPIFVLPNLQKPFQVHCDACGSSLGRVLQQDGHVIAYESILFSKAEIVAQI 367
+ LKEKL++ P+ +LP+ +K F V+CDA LG VL QDGHV+AY S E
Sbjct: 1760 QTLKEKLVSSPVLILPDTRKDFMVYCDASRQGLGCVLMQDGHVVAYASRQLWPHEGNYPT 1819

Query: 368 YEKELLGVIHALSTWKHYLLVADFIGHTDHESLRYFLSQPKLSDKQMRW 514
++ EL V+HAL W+HYL+ +TDH+SL+Y +Q L+ +Q RW
Sbjct: 1820 HDLELAAVVHALKIWRHYLIGNRCEIYTDHKSLKYIFTQSDLNLRQRRW 1868



Score = 25.8 bits (55), Expect(2) = 4e-32
Identities = 12/18 (66%), Positives = 14/18 (77%)
Frame = +1

Query: 544 IVYVEGKENVIADALSRK 597
I Y GK NV+ADALS+K
Sbjct: 1879 IHYHPGKANVVADALSQK 1896


>tr|Q6UUN7|Q6UUN7_ORYSJ Putative gag-pol polyprotein OS=Oryza sativa
subsp. japonica GN=OSJNBa0095C12.8 PE=4 SV=1
Length = 1234

Score = 158 bits (399), Expect(2) = 9e-41
Identities = 81/178 (45%), Positives = 109/178 (61%)
Frame = +2

Query: 2 AKVAAIQDSPPLRNVYDMRSFLGLCS*YKRFIFRFAKIAVALHHLTKKGVPFSWKQTQIT 181
AKV AIQ P + V +RSFLGL Y+RF+ F+ IA L+ LTKKGVPF+W +Q
Sbjct: 747 AKVEAIQSWPTPKTVSQVRSFLGLAGFYRRFVQDFSTIAAPLNALTKKGVPFTWGTSQEN 806

Query: 182 AFERLKEKLMTGPIFVLPNLQKPFQVHCDACGSSLGRVLQQDGHVIAYESILFSKAEIVA 361
AF LK+KL P+ LP+ K F++ CDA G LG VL Q+G +AY S S +
Sbjct: 807 AFHMLKDKLTHAPLLQLPDFNKTFELECDASGIGLGGVLLQEGKPVAYFSEKLSGPVLNY 866

Query: 362 QIYEKELLGVIHALSTWKHYLLVADFIGHTDHESLRYFLSQPKLSDKQMRWANFCLSF 535
Y+KEL ++ L TW+HYL +F+ H+DHESL++ SQ KL+ + +W F SF
Sbjct: 867 STYDKELYALVRTLETWQHYLWPKEFVIHSDHESLKHIRSQGKLNRRHAKWVEFIESF 924



Score = 32.7 bits (73), Expect(2) = 9e-41
Identities = 14/27 (51%), Positives = 21/27 (77%)
Frame = +1

Query: 517 KFLSLFHFQIVYVEGKENVIADALSRK 597
+F+ F + I + +GKEN+IADALSR+
Sbjct: 919 EFIESFPYVIKHKKGKENIIADALSRR 945


>tr|Q94I07|Q94I07_ORYSA Putative retroelement OS=Oryza sativa
GN=OSJNBa0034E23.18 PE=4 SV=1
Length = 2447

Score = 157 bits (398), Expect(2) = 1e-40
Identities = 81/178 (45%), Positives = 109/178 (61%)
Frame = +2

Query: 2 AKVAAIQDSPPLRNVYDMRSFLGLCS*YKRFIFRFAKIAVALHHLTKKGVPFSWKQTQIT 181
AKV AIQ P + V +RSFLGL Y+RF+ F+ IA L+ LTKKGVPF+W +Q
Sbjct: 931 AKVEAIQSWPTPKTVSQVRSFLGLAGFYRRFVQDFSTIAAPLNVLTKKGVPFTWGTSQEN 990

Query: 182 AFERLKEKLMTGPIFVLPNLQKPFQVHCDACGSSLGRVLQQDGHVIAYESILFSKAEIVA 361
AF LK+KL P+ LP+ K F++ CDA G LG VL Q+G +AY S S +
Sbjct: 991 AFHMLKDKLTHAPLLQLPDFNKTFELECDASGIGLGGVLLQEGKPVAYFSEKLSGPVLNY 1050

Query: 362 QIYEKELLGVIHALSTWKHYLLVADFIGHTDHESLRYFLSQPKLSDKQMRWANFCLSF 535
Y+KEL ++ L TW+HYL +F+ H+DHESL++ SQ KL+ + +W F SF
Sbjct: 1051 STYDKELYALVRTLETWQHYLWPKEFVIHSDHESLKHIRSQGKLNRRHAKWVEFIESF 1108



Score = 32.7 bits (73), Expect(2) = 1e-40
Identities = 14/27 (51%), Positives = 21/27 (77%)
Frame = +1

Query: 517 KFLSLFHFQIVYVEGKENVIADALSRK 597
+F+ F + I + +GKEN+IADALSR+
Sbjct: 1103 EFIESFPYVIKHKKGKENIIADALSRR 1129



Score = 134 bits (338), Expect(2) = 4e-32
Identities = 72/169 (42%), Positives = 99/169 (58%)
Frame = +2

Query: 8 VAAIQDSPPLRNVYDMRSFLGLCS*YKRFIFRFAKIAVALHHLTKKGVPFSWKQTQITAF 187
V A+ D + V +RSFLGL Y+RFI F+KIA + L KK F W AF
Sbjct: 1725 VTAVTDWKQPKTVTQIRSFLGLAGYYRRFIENFSKIARPMTQLLKKEEKFVWSPQCEKAF 1784

Query: 188 ERLKEKLMTGPIFVLPNLQKPFQVHCDACGSSLGRVLQQDGHVIAYESILFSKAEIVAQI 367
+ LKEKL++ P+ +LP+ +K F V+CDA LG VL Q+GHV+AY S E
Sbjct: 1785 QTLKEKLVSSPVLILPDTRKDFMVYCDASPQGLGCVLMQEGHVVAYASRQLWPHEGNYPT 1844

Query: 368 YEKELLGVIHALSTWKHYLLVADFIGHTDHESLRYFLSQPKLSDKQMRW 514
++ EL V+HAL W+HYL+ +TDH+SL+Y +Q L+ +Q RW
Sbjct: 1845 HDLELAAVVHALKIWRHYLIGNRCEIYTDHKSLKYIFTQSDLNLRQRRW 1893



Score = 27.3 bits (59), Expect(2) = 4e-32
Identities = 13/18 (72%), Positives = 14/18 (77%)
Frame = +1

Query: 544 IVYVEGKENVIADALSRK 597
I Y GK NV+ADALSRK
Sbjct: 1904 IHYHPGKANVVADALSRK 1921


>tr|Q7XG23|Q7XG23_ORYSJ Retrotransposon protein, putative, Ty3-gypsy
subclass OS=Oryza sativa subsp. japonica
GN=LOC_Os10g16560 PE=4 SV=1
Length = 2447

Score = 157 bits (398), Expect(2) = 1e-40
Identities = 81/178 (45%), Positives = 109/178 (61%)
Frame = +2

Query: 2 AKVAAIQDSPPLRNVYDMRSFLGLCS*YKRFIFRFAKIAVALHHLTKKGVPFSWKQTQIT 181
AKV AIQ P + V +RSFLGL Y+RF+ F+ IA L+ LTKKGVPF+W +Q
Sbjct: 931 AKVEAIQSWPTPKTVSQVRSFLGLAGFYRRFVQDFSTIAAPLNVLTKKGVPFTWGTSQEN 990

Query: 182 AFERLKEKLMTGPIFVLPNLQKPFQVHCDACGSSLGRVLQQDGHVIAYESILFSKAEIVA 361
AF LK+KL P+ LP+ K F++ CDA G LG VL Q+G +AY S S +
Sbjct: 991 AFHMLKDKLTHAPLLQLPDFNKTFELECDASGIGLGGVLLQEGKPVAYFSEKLSGPVLNY 1050

Query: 362 QIYEKELLGVIHALSTWKHYLLVADFIGHTDHESLRYFLSQPKLSDKQMRWANFCLSF 535
Y+KEL ++ L TW+HYL +F+ H+DHESL++ SQ KL+ + +W F SF
Sbjct: 1051 STYDKELYALVRTLETWQHYLWPKEFVIHSDHESLKHIRSQGKLNRRHAKWVEFIESF 1108



Score = 32.7 bits (73), Expect(2) = 1e-40
Identities = 14/27 (51%), Positives = 21/27 (77%)
Frame = +1

Query: 517 KFLSLFHFQIVYVEGKENVIADALSRK 597
+F+ F + I + +GKEN+IADALSR+
Sbjct: 1103 EFIESFPYVIKHKKGKENIIADALSRR 1129



Score = 134 bits (338), Expect(2) = 4e-32
Identities = 72/169 (42%), Positives = 99/169 (58%)
Frame = +2

Query: 8 VAAIQDSPPLRNVYDMRSFLGLCS*YKRFIFRFAKIAVALHHLTKKGVPFSWKQTQITAF 187
V A+ D + V +RSFLGL Y+RFI F+KIA + L KK F W AF
Sbjct: 1725 VTAVTDWKQPKTVTQIRSFLGLAGYYRRFIENFSKIARPMTQLLKKEEKFVWSPQCEKAF 1784

Query: 188 ERLKEKLMTGPIFVLPNLQKPFQVHCDACGSSLGRVLQQDGHVIAYESILFSKAEIVAQI 367
+ LKEKL++ P+ +LP+ +K F V+CDA LG VL Q+GHV+AY S E
Sbjct: 1785 QTLKEKLVSSPVLILPDTRKDFMVYCDASPQGLGCVLMQEGHVVAYASRQLWPHEGNYPT 1844

Query: 368 YEKELLGVIHALSTWKHYLLVADFIGHTDHESLRYFLSQPKLSDKQMRW 514
++ EL V+HAL W+HYL+ +TDH+SL+Y +Q L+ +Q RW
Sbjct: 1845 HDLELAAVVHALKIWRHYLIGNRCEIYTDHKSLKYIFTQSDLNLRQRRW 1893



Score = 27.3 bits (59), Expect(2) = 4e-32
Identities = 13/18 (72%), Positives = 14/18 (77%)
Frame = +1

Query: 544 IVYVEGKENVIADALSRK 597
I Y GK NV+ADALSRK
Sbjct: 1904 IHYHPGKANVVADALSRK 1921


>tr|Q7XRN3|Q7XRN3_ORYSJ OSJNBa0024J22.19 protein OS=Oryza sativa
subsp. japonica GN=OSJNBa0024J22.19 PE=4 SV=2
Length = 1667

Score = 157 bits (398), Expect(2) = 1e-40
Identities = 81/178 (45%), Positives = 109/178 (61%)
Frame = +2

Query: 2 AKVAAIQDSPPLRNVYDMRSFLGLCS*YKRFIFRFAKIAVALHHLTKKGVPFSWKQTQIT 181
AKV AIQ P + V +RSFLGL Y+RF+ F+ IA L+ LTKKGVPF+W +Q
Sbjct: 854 AKVEAIQSWPTPKTVSQVRSFLGLAGFYRRFVQDFSTIAAPLNALTKKGVPFTWGTSQEN 913

Query: 182 AFERLKEKLMTGPIFVLPNLQKPFQVHCDACGSSLGRVLQQDGHVIAYESILFSKAEIVA 361
AF LK+KL P+ LP+ K F++ CDA G LG VL Q+G +AY S S +
Sbjct: 914 AFHMLKDKLTHAPLLQLPDFNKTFELECDASGIGLGGVLLQEGKPVAYFSEKLSGPVLNY 973

Query: 362 QIYEKELLGVIHALSTWKHYLLVADFIGHTDHESLRYFLSQPKLSDKQMRWANFCLSF 535
Y+KEL ++ L TW+HYL +F+ H+DHESL++ SQ KL+ + +W F SF
Sbjct: 974 STYDKELYALVRTLETWQHYLWPKEFVIHSDHESLKHIHSQGKLNRRHAKWVEFIESF 1031



Score = 32.7 bits (73), Expect(2) = 1e-40
Identities = 14/27 (51%), Positives = 21/27 (77%)
Frame = +1

Query: 517 KFLSLFHFQIVYVEGKENVIADALSRK 597
+F+ F + I + +GKEN+IADALSR+
Sbjct: 1026 EFIESFPYVIKHKKGKENIIADALSRR 1052


>tr|Q01KW5|Q01KW5_ORYSA H0211A12.9 protein OS=Oryza sativa
GN=H0211A12.9 PE=4 SV=1
Length = 1667

Score = 157 bits (398), Expect(2) = 1e-40
Identities = 81/178 (45%), Positives = 109/178 (61%)
Frame = +2

Query: 2 AKVAAIQDSPPLRNVYDMRSFLGLCS*YKRFIFRFAKIAVALHHLTKKGVPFSWKQTQIT 181
AKV AIQ P + V +RSFLGL Y+RF+ F+ IA L+ LTKKGVPF+W +Q
Sbjct: 854 AKVEAIQSWPTPKTVSQVRSFLGLAGFYRRFVQDFSTIAAPLNALTKKGVPFTWGTSQEN 913

Query: 182 AFERLKEKLMTGPIFVLPNLQKPFQVHCDACGSSLGRVLQQDGHVIAYESILFSKAEIVA 361
AF LK+KL P+ LP+ K F++ CDA G LG VL Q+G +AY S S +
Sbjct: 914 AFHMLKDKLTHAPLLQLPDFNKTFELECDASGIGLGGVLLQEGKPVAYFSEKLSGPVLNY 973

Query: 362 QIYEKELLGVIHALSTWKHYLLVADFIGHTDHESLRYFLSQPKLSDKQMRWANFCLSF 535
Y+KEL ++ L TW+HYL +F+ H+DHESL++ SQ KL+ + +W F SF
Sbjct: 974 STYDKELYALVRTLETWQHYLWPKEFVIHSDHESLKHIHSQGKLNRRHAKWVEFIESF 1031



Score = 32.7 bits (73), Expect(2) = 1e-40
Identities = 14/27 (51%), Positives = 21/27 (77%)
Frame = +1

Query: 517 KFLSLFHFQIVYVEGKENVIADALSRK 597
+F+ F + I + +GKEN+IADALSR+
Sbjct: 1026 EFIESFPYVIKHKKGKENIIADALSRR 1052


>tr|Q7XR16|Q7XR16_ORYSJ OSJNBb0022F23.14 protein OS=Oryza sativa
subsp. japonica GN=OSJNBb0022F23.14 PE=4 SV=1
Length = 1431

Score = 157 bits (396), Expect(2) = 2e-40
Identities = 80/178 (44%), Positives = 109/178 (61%)
Frame = +2

Query: 2 AKVAAIQDSPPLRNVYDMRSFLGLCS*YKRFIFRFAKIAVALHHLTKKGVPFSWKQTQIT 181
AKV AIQ P + V +RSFLGL Y+RF+ F+ IA L+ LTKKGVPF+W +Q
Sbjct: 876 AKVEAIQSWPTPKTVSQVRSFLGLAGFYRRFVQDFSTIAAPLNALTKKGVPFTWGTSQEN 935

Query: 182 AFERLKEKLMTGPIFVLPNLQKPFQVHCDACGSSLGRVLQQDGHVIAYESILFSKAEIVA 361
AF LK+KL P+ LP+ K F++ CDA G LG VL Q+G +AY S + +
Sbjct: 936 AFHMLKDKLTHAPLLQLPDFNKTFELECDASGIGLGGVLLQEGKPVAYFSEKLTGPVLNY 995

Query: 362 QIYEKELLGVIHALSTWKHYLLVADFIGHTDHESLRYFLSQPKLSDKQMRWANFCLSF 535
Y+KEL ++ L TW+HYL +F+ H+DHESL++ SQ KL+ + +W F SF
Sbjct: 996 STYDKELYALVRTLETWQHYLWPKEFVIHSDHESLKHIRSQGKLNRRHAKWVEFIESF 1053



Score = 32.7 bits (73), Expect(2) = 2e-40
Identities = 14/27 (51%), Positives = 21/27 (77%)
Frame = +1

Query: 517 KFLSLFHFQIVYVEGKENVIADALSRK 597
+F+ F + I + +GKEN+IADALSR+
Sbjct: 1048 EFIESFPYVIKHKKGKENIIADALSRR 1074


>tr|B5G4Y0|B5G4Y0_TRIMO Putative gag-pol polyprotein OS=Triticum
monococcum subsp. aegilopoides GN=gag-pol PE=4 SV=1
Length = 1704

Score = 155 bits (393), Expect(2) = 3e-40
Identities = 79/178 (44%), Positives = 107/178 (60%)
Frame = +2

Query: 2 AKVAAIQDSPPLRNVYDMRSFLGLCS*YKRFIFRFAKIAVALHHLTKKGVPFSWKQTQIT 181
AK+ AI+ P + V +RSFLGL Y+RF+ F+ IA L+ +TKK VPF W Q
Sbjct: 975 AKIEAIESWPHPKTVTQVRSFLGLAGFYRRFVRDFSTIAAPLNEVTKKDVPFVWGTAQEE 1034

Query: 182 AFERLKEKLMTGPIFVLPNLQKPFQVHCDACGSSLGRVLQQDGHVIAYESILFSKAEIVA 361
AF LK+KL P+ LPN K F++ CDA G LG VL QDG +AY S FS +
Sbjct: 1035 AFTVLKDKLTYAPLLQLPNFNKTFELECDASGIGLGGVLLQDGKPVAYFSEKFSGPSLNY 1094

Query: 362 QIYEKELLGVIHALSTWKHYLLVADFIGHTDHESLRYFLSQPKLSDKQMRWANFCLSF 535
Y+KEL ++ L TW+HYL +F+ H+DHESL++ SQ KL+ + +W F +F
Sbjct: 1095 STYDKELYALVRTLETWQHYLWPKEFVIHSDHESLKHIKSQAKLNRRHAKWVEFIETF 1152



Score = 33.5 bits (75), Expect(2) = 3e-40
Identities = 15/27 (55%), Positives = 21/27 (77%)
Frame = +1

Query: 517 KFLSLFHFQIVYVEGKENVIADALSRK 597
+F+ F + I + +GKENVIADALSR+
Sbjct: 1147 EFIETFPYVIKHKKGKENVIADALSRR 1173