DK955161
Clone id TST39A01NGRL0022_F18
Library
Length 549
Definition Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0022_F18. 5' end sequence.
Accession
Tissue type prothallia with plantlets
Developmental stage gametophytes with sporophytes
Contig ID
Sequence
CCTGTTTTTCGGCATCTTCAGAGTCGACCAAAAGGCTCAGAAGGAAGCGAGTCCAGTGTT
TGCAAGACATCTTAATTCTCCTCCTTTGCCACTTAGCTCCATGGATTGCACATTTGCGGC
GCAGGCCTCTCCGCAAACAGCTGCGGCTCCCCTAGCAGCCCTCTCACACAAGTCTTCTGT
TCAGATCCCGCGGGGGGCTCTCCGCTCAAACTTCTGTGTGCAGACAGGTCTTTTAAAGTT
GGATATTCAGAGAGGGATAAAGTCAAGGTTGAGGAGAAACAGGGGCAGTGTCAAGTTGGC
AGTTGTTAGAGCAAGTGGTGATACTCAAGATAGTGGGTCTCCGATAGCTCCGTTCCAGCC
AGAGTCTCCTACCGGTCAGTACTTGGCACAGCTTCTTCAAAGCCATCCCCATCTTGTTCC
TGCTGCTGTTGAGCAAGAGCTTGAGAAGCTTGCTGAGAATCGTACTTTGCAGGATTCTTC
CACTGAGCCTAGCTCAAAGGGTTCCGAGCTTGTCCTCTACAGACGGATTGCTGAGCTCAA
AGAGCAGGA
■■Homology search results ■■ -
sp_hit_id Q8BI22
Definition sp|Q8BI22|CN145_MOUSE Uncharacterized protein C14orf145 homolog OS=Mus musculus
Align length 112
Score (bit) 31.2
E-value 3.4
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK955161|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0022_F18, 5'
(549 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q8BI22|CN145_MOUSE Uncharacterized protein C14orf145 homolog ... 31 3.4
sp|P10093|CALCB_RAT Calcitonin gene-related peptide 2 OS=Rattus ... 31 4.5
sp|P33653|YBL1_STRCI Uncharacterized 26.1 kDa protein in blaB 3'... 30 5.9
sp|Q8IZU2|WDR17_HUMAN WD repeat-containing protein 17 OS=Homo sa... 30 5.9
sp|Q1LIN6|SECA_RALME Protein translocase subunit secA OS=Ralston... 30 5.9
sp|Q32KP0|CI024_BOVIN Uncharacterized protein C9orf24 homolog OS... 30 5.9
sp|Q46X03|SECA_RALEJ Protein translocase subunit secA OS=Ralston... 30 7.7
sp|P15215|LAMC1_DROME Laminin subunit gamma-1 OS=Drosophila mela... 30 7.7

>sp|Q8BI22|CN145_MOUSE Uncharacterized protein C14orf145 homolog
OS=Mus musculus PE=2 SV=2
Length = 1102

Score = 31.2 bits (69), Expect = 3.4
Identities = 30/112 (26%), Positives = 50/112 (44%), Gaps = 12/112 (10%)
Frame = +2

Query: 227 GLLKLDIQRGIKS----RLRRNRGSVKLAVVRASGDTQDSGSPI--APFQPESPTGQYLA 388
G LK D+++ I RLRR+ G ++V S D G+ F P SP Y
Sbjct: 77 GQLKEDLEQSINQLRSQRLRRSSGGRSVSVTSLSASDLDGGAVTENLRFAPTSPLKDYDL 136

Query: 389 QLLQSHPHLVPAAVEQELEKLAE----NRTLQDSSTEPSSKGSEL--VLYRR 526
Q ++ + E + + + +++L+D S+E G +L L+RR
Sbjct: 137 QGIKRNRFRTGVRFVSETDDMVQLHTFHQSLRDLSSEQVRLGDDLNRELFRR 188


>sp|P10093|CALCB_RAT Calcitonin gene-related peptide 2 OS=Rattus
norvegicus GN=Calcb PE=2 SV=1
Length = 134

Score = 30.8 bits (68), Expect = 4.5
Identities = 18/53 (33%), Positives = 26/53 (49%)
Frame = +2

Query: 347 APFQPESPTGQYLAQLLQSHPHLVPAAVEQELEKLAENRTLQDSSTEPSSKGS 505
APF+ + L L HL+ AA+ Q+ E+ A ++ TE S KGS
Sbjct: 27 APFRSALESSLDLGTLSDQEKHLLLAALIQDYEQKARKLEQEEQETEGSRKGS 79


>sp|P33653|YBL1_STRCI Uncharacterized 26.1 kDa protein in blaB
3'region OS=Streptomyces cacaoi PE=4 SV=1
Length = 242

Score = 30.4 bits (67), Expect = 5.9
Identities = 18/57 (31%), Positives = 26/57 (45%)
Frame = +2

Query: 245 IQRGIKSRLRRNRGSVKLAVVRASGDTQDSGSPIAPFQPESPTGQYLAQLLQSHPHL 415
I+ G + LR G V L VV + QD PF + G + +L+ HPH+
Sbjct: 83 IEAGDRGELREELGDVLLQVVFHARIAQDDADE--PFAIDDVAGTLVTKLVHRHPHV 137


>sp|Q8IZU2|WDR17_HUMAN WD repeat-containing protein 17 OS=Homo sapiens
GN=WDR17 PE=2 SV=2
Length = 1322

Score = 30.4 bits (67), Expect = 5.9
Identities = 19/65 (29%), Positives = 31/65 (47%), Gaps = 8/65 (12%)
Frame = +2

Query: 377 QYLAQLLQSHPHLVPAAVEQELEKL--------AENRTLQDSSTEPSSKGSELVLYRRIA 532
+Y +QLL+ VP +E E+L + NR+L+DS P S ++ +
Sbjct: 1186 EYTSQLLKRREVSVPLKIEYLSEELDAWRACTQSTNRSLEDSPYTPPSDSQRMIYATLLK 1245

Query: 533 ELKEQ 547
LKE+
Sbjct: 1246 RLKEE 1250


>sp|Q1LIN6|SECA_RALME Protein translocase subunit secA OS=Ralstonia
metallidurans (strain CH34 / ATCC 43123 / DSM 2839)
GN=secA PE=3 SV=1
Length = 930

Score = 30.4 bits (67), Expect = 5.9
Identities = 24/79 (30%), Positives = 35/79 (44%), Gaps = 6/79 (7%)
Frame = +2

Query: 299 AVVRASGDTQDSGSPIAPFQPESPTGQYLAQLLQSH--PHLV----PAAVEQELEKLAEN 460
AVVR D D G P+ T +YL+ LL PH V A E E+ A
Sbjct: 440 AVVRDIRDCYDRGQPVLVGTTSIETSEYLSDLLNKEKLPHQVLNAKQHAREAEIVAQAGR 499

Query: 461 RTLQDSSTEPSSKGSELVL 517
+ +T + +G+++VL
Sbjct: 500 PKMVTIATNMAGRGTDIVL 518


>sp|Q32KP0|CI024_BOVIN Uncharacterized protein C9orf24 homolog
OS=Bos taurus PE=2 SV=1
Length = 304

Score = 30.4 bits (67), Expect = 5.9
Identities = 11/33 (33%), Positives = 20/33 (60%)
Frame = -3

Query: 337 PTILSITTCSNNCQLDTAPVSPQP*LYPSLNIQ 239
PT+ S++ C + + A ++PQP YP N++
Sbjct: 238 PTVRSVSPCEHRSGMQCAVITPQPSYYPCPNLR 270


>sp|Q46X03|SECA_RALEJ Protein translocase subunit secA OS=Ralstonia
eutropha (strain JMP134) GN=secA PE=3 SV=1
Length = 924

Score = 30.0 bits (66), Expect = 7.7
Identities = 24/79 (30%), Positives = 35/79 (44%), Gaps = 6/79 (7%)
Frame = +2

Query: 299 AVVRASGDTQDSGSPIAPFQPESPTGQYLAQLLQSH--PHLVPAAVEQELE----KLAEN 460
AVVR D D G P+ T +YL+ LL PH V A + E E A
Sbjct: 440 AVVRDIRDCYDRGQPVLVGTTSIETSEYLSDLLNKEKLPHQVLNAKQHEREAEIVAQAGR 499

Query: 461 RTLQDSSTEPSSKGSELVL 517
+ +T + +G+++VL
Sbjct: 500 PKMITIATNMAGRGTDIVL 518


>sp|P15215|LAMC1_DROME Laminin subunit gamma-1 OS=Drosophila
melanogaster GN=LanB2 PE=1 SV=2
Length = 1639

Score = 30.0 bits (66), Expect = 7.7
Identities = 16/36 (44%), Positives = 19/36 (52%)
Frame = -2

Query: 224 SAHRSLSGEPPAGSEQKTCVRGLLGEPQLFAERPAP 117
+AHR +G P EQ TC G LG+ F E AP
Sbjct: 694 TAHRGAAGHPATWIEQCTCPEGYLGQ---FCESCAP 726


tr_hit_id B8LPW2
Definition tr|B8LPW2|B8LPW2_PICSI Putative uncharacterized protein OS=Picea sitchensis
Align length 92
Score (bit) 100.0
E-value 7.0e-20
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK955161|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0022_F18, 5'
(549 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|B8LPW2|B8LPW2_PICSI Putative uncharacterized protein OS=Picea... 100 7e-20
tr|A7QTZ7|A7QTZ7_VITVI Chromosome undetermined scaffold_174, who... 100 9e-20
tr|A9PIE4|A9PIE4_POPTR Putative uncharacterized protein OS=Popul... 93 8e-18
tr|Q9LVJ0|Q9LVJ0_ARATH Gb|AAF02142.1 (Putative uncharacterized p... 90 9e-17
tr|Q8W4L9|Q8W4L9_ARATH Putative uncharacterized protein At3g1780... 90 9e-17
tr|Q0WNF6|Q0WNF6_ARATH Putative uncharacterized protein At3g1780... 90 9e-17
tr|A9PF86|A9PF86_POPTR Putative uncharacterized protein OS=Popul... 89 2e-16
tr|Q9LP80|Q9LP80_ARATH T1N15.6 (Putative uncharacterized protein... 87 4e-16
tr|Q2V4I1|Q2V4I1_ARATH Uncharacterized protein At1g48450.2 OS=Ar... 87 4e-16
tr|Q7X9D6|Q7X9D6_MARQU ABRH7 (Fragment) OS=Marsilea quadrifolia ... 87 7e-16
tr|A7PSL3|A7PSL3_VITVI Chromosome chr6 scaffold_28, whole genome... 82 1e-14
tr|B6TEU7|B6TEU7_MAIZE Putative uncharacterized protein OS=Zea m... 80 7e-14
tr|A7PC12|A7PC12_VITVI Chromosome chr2 scaffold_11, whole genome... 80 9e-14
tr|A5BNG8|A5BNG8_VITVI Putative uncharacterized protein OS=Vitis... 79 2e-13
tr|B7FJF5|B7FJF5_MEDTR Putative uncharacterized protein OS=Medic... 77 5e-13
tr|Q10DW0|Q10DW0_ORYSJ Os03g0717900 protein OS=Oryza sativa subs... 76 1e-12
tr|B4G0A9|B4G0A9_MAIZE Putative uncharacterized protein OS=Zea m... 76 1e-12
tr|A5BZ18|A5BZ18_VITVI Putative uncharacterized protein OS=Vitis... 76 1e-12
tr|A3AM41|A3AM41_ORYSJ Putative uncharacterized protein OS=Oryza... 76 1e-12
tr|A2XLF0|A2XLF0_ORYSI Putative uncharacterized protein OS=Oryza... 76 1e-12
tr|B6UFZ7|B6UFZ7_MAIZE Putative uncharacterized protein OS=Zea m... 73 1e-11
tr|Q7X6P4|Q7X6P4_ORYSA OSJNBa0006A01.21 protein (OSJNba0093F12.3... 72 1e-11
tr|Q0JAJ2|Q0JAJ2_ORYSJ Os04g0595100 protein OS=Oryza sativa subs... 72 1e-11
tr|B8ATK2|B8ATK2_ORYSI Putative uncharacterized protein OS=Oryza... 72 1e-11
tr|Q10DV9|Q10DV9_ORYSJ cDNA clone:001-023-C09, full insert seque... 68 3e-10
tr|Q9FVR1|Q9FVR1_ARATH Putative uncharacterized protein F3C3.6 (... 68 4e-10
tr|A4S3L6|A4S3L6_OSTLU Predicted protein OS=Ostreococcus lucimar... 54 5e-06
tr|A8IKK2|A8IKK2_CHLRE Predicted protein OS=Chlamydomonas reinha... 53 1e-05
tr|Q010E1|Q010E1_OSTTA Homology to unknown gene (Fragment) OS=Os... 51 5e-05
tr|B6TD75|B6TD75_MAIZE Putative uncharacterized protein OS=Zea m... 51 5e-05

>tr|B8LPW2|B8LPW2_PICSI Putative uncharacterized protein OS=Picea
sitchensis PE=2 SV=1
Length = 434

Score = 100 bits (248), Expect = 7e-20
Identities = 53/92 (57%), Positives = 65/92 (70%)
Frame = +2

Query: 266 RLRRNRGSVKLAVVRASGDTQDSGSPIAPFQPESPTGQYLAQLLQSHPHLVPAAVEQELE 445
R RRN G VRA+G+ +S PIAP Q ESPTGQ+L+QLL+ HPHL+PAAVEQ+LE
Sbjct: 74 RSRRNFG------VRAAGNYDESSKPIAPLQLESPTGQFLSQLLKDHPHLLPAAVEQQLE 127

Query: 446 KLAENRTLQDSSTEPSSKGSELVLYRRIAELK 541
+L +R PSS +ELVLYRRIAE+K
Sbjct: 128 RLVADRDAAAQQDPPSSTSTELVLYRRIAEVK 159


>tr|A7QTZ7|A7QTZ7_VITVI Chromosome undetermined scaffold_174, whole
genome shotgun sequence OS=Vitis vinifera
GN=GSVIVT00006608001 PE=4 SV=1
Length = 362

Score = 99.8 bits (247), Expect = 9e-20
Identities = 52/88 (59%), Positives = 64/88 (72%), Gaps = 2/88 (2%)
Frame = +2

Query: 284 GSVKLAVVRASGDTQDSGS--PIAPFQPESPTGQYLAQLLQSHPHLVPAAVEQELEKLAE 457
G K +VRAS SGS PIAP Q ESP GQ+L+Q+L SHPHLVPAAVEQ+LE+L
Sbjct: 4 GCKKCTIVRASASADSSGSAAPIAPLQLESPIGQFLSQILISHPHLVPAAVEQQLEQLQT 63

Query: 458 NRTLQDSSTEPSSKGSELVLYRRIAELK 541
+R ++ E S+ G+ELVLYRRIAE+K
Sbjct: 64 DRDAEEHKEESSASGTELVLYRRIAEVK 91


>tr|A9PIE4|A9PIE4_POPTR Putative uncharacterized protein OS=Populus
trichocarpa PE=2 SV=1
Length = 417

Score = 93.2 bits (230), Expect = 8e-18
Identities = 49/90 (54%), Positives = 62/90 (68%), Gaps = 4/90 (4%)
Frame = +2

Query: 284 GSVKLAVVRASGDTQDSGS----PIAPFQPESPTGQYLAQLLQSHPHLVPAAVEQELEKL 451
GS + VRAS + S PIAP Q ESP GQ+L+Q+L SHPHLVPAAVEQ+LE+L
Sbjct: 59 GSRRCMAVRASSSSSSDSSGSIVPIAPLQLESPIGQFLSQILVSHPHLVPAAVEQQLEQL 118

Query: 452 AENRTLQDSSTEPSSKGSELVLYRRIAELK 541
+R + +PS+ G++LVLYRRIAE K
Sbjct: 119 QTDRDSEKQKEDPSATGTDLVLYRRIAEAK 148


>tr|Q9LVJ0|Q9LVJ0_ARATH Gb|AAF02142.1 (Putative uncharacterized
protein At3g17800) OS=Arabidopsis thaliana GN=At3g17800
PE=2 SV=1
Length = 421

Score = 89.7 bits (221), Expect = 9e-17
Identities = 49/87 (56%), Positives = 64/87 (73%), Gaps = 6/87 (6%)
Frame = +2

Query: 302 VVRASGDTQDSGS-----PIAPFQPESPTGQYLAQLLQSHPHLVPAAVEQELEKLAENRT 466
VVRAS + D+ S PIAP Q +SP GQ+L+Q+L SHPHLVPAAVEQ+LE+L +R
Sbjct: 73 VVRASSASNDASSGSSPKPIAPLQLQSPAGQFLSQILVSHPHLVPAAVEQQLEQLQTDRD 132

Query: 467 LQDSSTEPSS-KGSELVLYRRIAELKE 544
Q + + +S G+++VLYRRIAELKE
Sbjct: 133 SQGQNKDSASVPGTDIVLYRRIAELKE 159


>tr|Q8W4L9|Q8W4L9_ARATH Putative uncharacterized protein At3g17800;
MEB5.2 (Putative uncharacterized protein At3g17800)
OS=Arabidopsis thaliana GN=At3g17800/MEB5.2 PE=2 SV=1
Length = 421

Score = 89.7 bits (221), Expect = 9e-17
Identities = 49/87 (56%), Positives = 64/87 (73%), Gaps = 6/87 (6%)
Frame = +2

Query: 302 VVRASGDTQDSGS-----PIAPFQPESPTGQYLAQLLQSHPHLVPAAVEQELEKLAENRT 466
VVRAS + D+ S PIAP Q +SP GQ+L+Q+L SHPHLVPAAVEQ+LE+L +R
Sbjct: 73 VVRASSASNDASSGSSPKPIAPLQLQSPAGQFLSQILVSHPHLVPAAVEQQLEQLQTDRD 132

Query: 467 LQDSSTEPSS-KGSELVLYRRIAELKE 544
Q + + +S G+++VLYRRIAELKE
Sbjct: 133 SQGQNKDSASVPGTDIVLYRRIAELKE 159


>tr|Q0WNF6|Q0WNF6_ARATH Putative uncharacterized protein At3g17800
OS=Arabidopsis thaliana GN=At3g17800 PE=2 SV=1
Length = 421

Score = 89.7 bits (221), Expect = 9e-17
Identities = 49/87 (56%), Positives = 64/87 (73%), Gaps = 6/87 (6%)
Frame = +2

Query: 302 VVRASGDTQDSGS-----PIAPFQPESPTGQYLAQLLQSHPHLVPAAVEQELEKLAENRT 466
VVRAS + D+ S PIAP Q +SP GQ+L+Q+L SHPHLVPAAVEQ+LE+L +R
Sbjct: 73 VVRASSASNDASSGSSPKPIAPLQLQSPAGQFLSQILVSHPHLVPAAVEQQLEQLQTDRD 132

Query: 467 LQDSSTEPSS-KGSELVLYRRIAELKE 544
Q + + +S G+++VLYRRIAELKE
Sbjct: 133 SQGQNKDSASVPGTDIVLYRRIAELKE 159


>tr|A9PF86|A9PF86_POPTR Putative uncharacterized protein OS=Populus
trichocarpa PE=2 SV=1
Length = 401

Score = 89.0 bits (219), Expect = 2e-16
Identities = 44/81 (54%), Positives = 60/81 (74%)
Frame = +2

Query: 299 AVVRASGDTQDSGSPIAPFQPESPTGQYLAQLLQSHPHLVPAAVEQELEKLAENRTLQDS 478
A + +S D+ S + IAP Q ESP GQ+L+Q+L SHPHLVPAAVEQ+LE+L +R +
Sbjct: 68 ASLSSSSDSSGSIASIAPLQLESPVGQFLSQILISHPHLVPAAVEQQLEQLQTDRDAEKQ 127

Query: 479 STEPSSKGSELVLYRRIAELK 541
EPS+ ++LVLYR+IAE+K
Sbjct: 128 KEEPSATSTDLVLYRKIAEVK 148


>tr|Q9LP80|Q9LP80_ARATH T1N15.6 (Putative uncharacterized protein
At1g48450) (At1g48450/T1N15_5) OS=Arabidopsis thaliana
GN=At1g48450 PE=2 SV=1
Length = 423

Score = 87.4 bits (215), Expect = 4e-16
Identities = 46/83 (55%), Positives = 62/83 (74%), Gaps = 1/83 (1%)
Frame = +2

Query: 302 VVRASGDTQDSGSPIAPFQPESPTGQYLAQLLQSHPHLVPAAVEQELEKLAENRTLQDSS 481
VV+AS S IAP Q +SP GQ+L+Q+L SHPHLVPAAVEQ+LE+L +R ++ S
Sbjct: 69 VVKASASGDASTESIAPLQLKSPVGQFLSQILVSHPHLVPAAVEQQLEQLQIDRDAEEQS 128

Query: 482 TEPSS-KGSELVLYRRIAELKEQ 547
+ SS G+++VLYRRIAE+KE+
Sbjct: 129 KDASSVLGTDIVLYRRIAEVKEK 151


>tr|Q2V4I1|Q2V4I1_ARATH Uncharacterized protein At1g48450.2
OS=Arabidopsis thaliana GN=At1g48450 PE=4 SV=1
Length = 342

Score = 87.4 bits (215), Expect = 4e-16
Identities = 46/83 (55%), Positives = 62/83 (74%), Gaps = 1/83 (1%)
Frame = +2

Query: 302 VVRASGDTQDSGSPIAPFQPESPTGQYLAQLLQSHPHLVPAAVEQELEKLAENRTLQDSS 481
VV+AS S IAP Q +SP GQ+L+Q+L SHPHLVPAAVEQ+LE+L +R ++ S
Sbjct: 69 VVKASASGDASTESIAPLQLKSPVGQFLSQILVSHPHLVPAAVEQQLEQLQIDRDAEEQS 128

Query: 482 TEPSS-KGSELVLYRRIAELKEQ 547
+ SS G+++VLYRRIAE+KE+
Sbjct: 129 KDASSVLGTDIVLYRRIAEVKEK 151


>tr|Q7X9D6|Q7X9D6_MARQU ABRH7 (Fragment) OS=Marsilea quadrifolia
PE=2 SV=1
Length = 176

Score = 86.7 bits (213), Expect = 7e-16
Identities = 44/83 (53%), Positives = 56/83 (67%)
Frame = +2

Query: 278 NRGSVKLAVVRASGDTQDSGSPIAPFQPESPTGQYLAQLLQSHPHLVPAAVEQELEKLAE 457
NR +L + A S +P+AP PESP+GQ+L +LLQSHPHLVPAA EQ+LE LAE
Sbjct: 94 NRRKTRLTI-NAEMTASASTTPLAPLIPESPSGQFLTELLQSHPHLVPAAAEQQLETLAE 152

Query: 458 NRTLQDSSTEPSSKGSELVLYRR 526
R S +P+ G+ELVLY+R
Sbjct: 153 AREAASSQEQPTPDGNELVLYKR 175