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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
DK955162
Clone id TST39A01NGRL0022_F19
Library
Length 579
Definition Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0022_F19. 5' end sequence.
Accession
Tissue type prothallia with plantlets
Developmental stage gametophytes with sporophytes
Contig ID -
Sequence 
ACTCAGTCCAAGCATCCAATGCTCTGATTGGACATGTCACAGAGGGGCTGATGTGTGTGA
AGAGTATGCTCTAACTTTGTACCTGCCAGAATTGACTAAATTGAATTTAAGTGACCCAAG
CGTTGCCATCACGTGCGAGAAGCACCAAGGACGTGGACACCTTACTTAGCGTACTCTTCA
GCAGTGAGAAGTGACTGAGAATTGAGCATGATATGTAGTCGTATCATGCATATCAGAGTA
GATGGTTATATTGTCTTCTCCAACATTAGTCTATTGATTGCGCCTTATATTTTCTTCTTG
TCGATTCAGGAAGGTTTATATGTCGGATATTTAACTTCTCTCTTGCTCATGCTTGTTATA
CTTCAAGATTGTGCACCTGGGATATTGTTGGACTCCTCTCCCTCACCTTTATGATTAATT
GTTAACAGCTCCAGCTCAGAGACTAGCACTCTCCTTTAACATTGCGCCCATTATGCAGGC
AAGGTTTGCCCATGTTCATACTTCTCACATATTTAGGCTTGAGAAGGGCCTTATGCCAAA
GTATACAAAGCAAGAACATTTATATAACGTGCACCATCA
■■Homology search results ■■ -
sp_hit_id Q6C044
Definition sp|Q6C044|ATG18_YARLI Autophagy-related protein 18 OS=Yarrowia lipolytica
Align length 36
Score (bit) 32.0
E-value 2.3
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK955162|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0022_F19, 5'
         (579 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q6C044|ATG18_YARLI Autophagy-related protein 18 OS=Yarrowia l...    32   2.3  
sp|Q929Z2|NADB_LISIN L-aspartate oxidase OS=Listeria innocua GN=...    30   8.7  

>sp|Q6C044|ATG18_YARLI Autophagy-related protein 18 OS=Yarrowia
           lipolytica GN=ATG18 PE=3 SV=1
          Length = 400

 Score = 32.0 bits (71), Expect = 2.3
 Identities = 15/36 (41%), Positives = 23/36 (63%)
 Frame = +2

Query: 425 TAPAQRLALSFNIAPIMQARFAHVHTSHIFRLEKGL 532
           T PAQ  +++FN+A  + A  +   T HIF+LE G+
Sbjct: 238 TYPAQIFSINFNLASNLMAVSSATETVHIFQLEAGV 273


>sp|Q929Z2|NADB_LISIN L-aspartate oxidase OS=Listeria innocua
           GN=nadB PE=3 SV=1
          Length = 484

 Score = 30.0 bits (66), Expect = 8.7
 Identities = 14/39 (35%), Positives = 20/39 (51%)
 Frame = +2

Query: 38  HRGADVCEEYALTLYLPELTKLNLSDPSVAITCEKHQGR 154
           H G D   ++  T    +LTK+N  +  +AI   KH GR
Sbjct: 121 HSGGDQTGKFLTTFLQEKLTKVNWQEQKMAIEIIKHDGR 159
tr_hit_id Q03B74
Definition tr|Q03B74|Q03B74_LACC3 Glycosyltransferase related enzyme OS=Lactobacillus casei (strain ATCC 334)
Align length 89
Score (bit) 35.0
E-value 3.0
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK955162|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0022_F19, 5'
         (579 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|Q03B74|Q03B74_LACC3 Glycosyltransferase related enzyme OS=Lac...    35   3.0  
tr|B3WBZ7|B3WBZ7_LACCB YkcC OS=Lactobacillus casei (strain BL23)...    35   3.0  
tr|A7GVH6|A7GVH6_BACCN Glycosyl transferase family 2 OS=Bacillus...    34   5.2  
tr|B4J974|B4J974_DROGR GH21998 OS=Drosophila grimshawi GN=GH2199...    34   5.2  
tr|A7TAS7|A7TAS7_NEMVE Predicted protein (Fragment) OS=Nematoste...    34   6.7  
tr|B8P4N9|B8P4N9_9APHY Hypothetical cholineesterase OS=Postia pl...    34   6.7  
tr|A0ZFF7|A0ZFF7_NODSP Putative uncharacterized protein OS=Nodul...    34   6.8  
tr|A0EGU9|A0EGU9_PARTE Chromosome undetermined scaffold_96, whol...    34   6.8  
tr|Q49VQ2|Q49VQ2_STAS1 Putative glucosyl transferase OS=Staphylo...    33   8.8  

>tr|Q03B74|Q03B74_LACC3 Glycosyltransferase related enzyme
           OS=Lactobacillus casei (strain ATCC 334) GN=LSEI_0708
           PE=4 SV=1
          Length = 325

 Score = 35.0 bits (79), Expect = 3.0
 Identities = 26/89 (29%), Positives = 42/89 (47%), Gaps = 11/89 (12%)
 Frame = +1

Query: 151 TWTPY----LAYSSAVRSD*ELSMICSRIMHIRVDGYIVFSNISLLIAPYI--FFLSIQE 312
           TW  Y    + Y    R   E      +++H+ +DG   FS + L +A ++  FFL I  
Sbjct: 188 TWVGYKQIAVEYDRQEREAGETHYPLRKMLHLAMDGITSFSTVPLTLASWLSGFFLIIAV 247

Query: 313 GLY-----VGYLTSLLLMLVILQDCAPGI 384
            L+     +G+LTSL  +++I      GI
Sbjct: 248 ALFGLSLALGHLTSLTWVMIITLLVGAGI 276


>tr|B3WBZ7|B3WBZ7_LACCB YkcC OS=Lactobacillus casei (strain BL23)
           GN=ykcC PE=4 SV=1
          Length = 325

 Score = 35.0 bits (79), Expect = 3.0
 Identities = 26/89 (29%), Positives = 42/89 (47%), Gaps = 11/89 (12%)
 Frame = +1

Query: 151 TWTPY----LAYSSAVRSD*ELSMICSRIMHIRVDGYIVFSNISLLIAPYI--FFLSIQE 312
           TW  Y    + Y    R   E      +++H+ +DG   FS + L +A ++  FFL I  
Sbjct: 188 TWVGYKQIAVEYDRQEREAGETHYPLRKMLHLAMDGITSFSTVPLTLASWLSGFFLIIAV 247

Query: 313 GLY-----VGYLTSLLLMLVILQDCAPGI 384
            L+     +G+LTSL  +++I      GI
Sbjct: 248 ALFGLSLALGHLTSLTWVMIITLLVGAGI 276


>tr|A7GVH6|A7GVH6_BACCN Glycosyl transferase family 2 OS=Bacillus
           cereus subsp. cytotoxis (strain NVH 391-98)
           GN=Bcer98_3950 PE=4 SV=1
          Length = 312

 Score = 34.3 bits (77), Expect = 5.2
 Identities = 19/66 (28%), Positives = 36/66 (54%)
 Frame = +1

Query: 166 LAYSSAVRSD*ELSMICSRIMHIRVDGYIVFSNISLLIAPYIFFLSIQEGLYVGYLTSLL 345
           + Y + +RSD E     S++++  +DG I F+N  L ++           +Y+G LT+LL
Sbjct: 190 IEYENVLRSDGESKWTFSKLLNYGIDGVISFNNKPLRLS-----------IYLGLLTTLL 238

Query: 346 LMLVIL 363
            +L ++
Sbjct: 239 AILYVI 244


>tr|B4J974|B4J974_DROGR GH21998 OS=Drosophila grimshawi GN=GH21998
           PE=4 SV=1
          Length = 260

 Score = 34.3 bits (77), Expect = 5.2
 Identities = 19/51 (37%), Positives = 23/51 (45%)
 Frame = -1

Query: 402 GRGVQQYPRCTILKYNKHEQERS*ISDI*TFLNRQEENIRRNQ*TNVGEDN 250
           G     YP C +   +K  +ERS   D+  FL   EEN   N   N G DN
Sbjct: 73  GSNHNNYPLCVVSADDKKRRERSNDFDVQEFLENLEENNNDNSNNNGGSDN 123


>tr|A7TAS7|A7TAS7_NEMVE Predicted protein (Fragment) OS=Nematostella
           vectensis GN=v1g46688 PE=4 SV=1
          Length = 145

 Score = 33.9 bits (76), Expect = 6.7
 Identities = 17/44 (38%), Positives = 19/44 (43%), Gaps = 10/44 (22%)
 Frame = +3

Query: 279 CALYFL----------LVDSGRFICRIFNFSLAHACYTSRLCTW 380
           C  YFL          L  SG  +C +F  SL H C T  LC W
Sbjct: 9   CVTYFLCLFVTCVSRILCVSGSLMCHVFFVSLCHLCVTYSLCLW 52


>tr|B8P4N9|B8P4N9_9APHY Hypothetical cholineesterase OS=Postia
           placenta Mad-698-R GN=POSPLDRAFT_127015 PE=4 SV=1
          Length = 1072

 Score = 33.9 bits (76), Expect = 6.7
 Identities = 18/42 (42%), Positives = 24/42 (57%), Gaps = 1/42 (2%)
 Frame = +2

Query: 23  SDWTCHRGADVCEEYALTLYL-PELTKLNLSDPSVAITCEKH 145
           S +TC    D C ++  TL L P  T L  ++ SVA+T EKH
Sbjct: 58  SGFTCTEAYDACSQFQETLLLAPNSTGLTAANLSVALTSEKH 99


>tr|A0ZFF7|A0ZFF7_NODSP Putative uncharacterized protein
           OS=Nodularia spumigena CCY 9414 GN=N9414_20485 PE=4 SV=1
          Length = 895

 Score = 33.9 bits (76), Expect = 6.8
 Identities = 20/68 (29%), Positives = 39/68 (57%)
 Frame = +1

Query: 160 PYLAYSSAVRSD*ELSMICSRIMHIRVDGYIVFSNISLLIAPYIFFLSIQEGLYVGYLTS 339
           P++  +SAV S   L ++ S +  I    +++ +    ++ P IF +S++ G+Y+ YLT 
Sbjct: 67  PWMYIASAVMSM-ALVVVYSWLQKIFPLRWVIVAIAPCMVMPLIFIVSLRGGVYISYLTV 125

Query: 340 LLLMLVIL 363
            L+ L+ L
Sbjct: 126 ALVFLLRL 133


>tr|A0EGU9|A0EGU9_PARTE Chromosome undetermined scaffold_96, whole
           genome shotgun sequence OS=Paramecium tetraurelia
           GN=GSPATT00026864001 PE=3 SV=1
          Length = 1155

 Score = 33.9 bits (76), Expect = 6.8
 Identities = 14/31 (45%), Positives = 23/31 (74%)
 Frame = +1

Query: 265 ISLLIAPYIFFLSIQEGLYVGYLTSLLLMLV 357
           + L+I   I +L IQE ++VG+ T+++LMLV
Sbjct: 195 LKLIIGMTILYLQIQEAVFVGFATAIILMLV 225


>tr|Q49VQ2|Q49VQ2_STAS1 Putative glucosyl transferase
           OS=Staphylococcus saprophyticus subsp. saprophyticus
           (strain ATCC 15305 / DSM 20229) GN=SSP2013 PE=4 SV=1
          Length = 353

 Score = 33.5 bits (75), Expect = 8.8
 Identities = 20/64 (31%), Positives = 33/64 (51%), Gaps = 4/64 (6%)
 Frame = +1

Query: 157 TPYLAYSSAVRSD*ELSMICSRIMHIRVDGYIVFSNISLLIAPY----IFFLSIQEGLYV 324
           T    Y +  R D E     S++++  +DG I F+N  L    Y    +FF+S+   LY+
Sbjct: 193 TKVFTYENVEREDGESKWSFSKLLNYGIDGLISFNNKPLRAMIYLGLIVFFISL---LYI 249

Query: 325 GYLT 336
           GY++
Sbjct: 250 GYIS 253