DK955163 |
Clone id |
TST39A01NGRL0022_F20 |
Library |
TST39 |
Length |
685 |
Definition |
Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0022_F20. 5' end sequence. |
Accession |
DK955163 |
Tissue type |
prothallia with plantlets |
Developmental stage |
gametophytes with sporophytes |
Contig ID |
CL4150Contig1 |
Sequence |
AACTGAGCAGGCAGCGAGACGCATACACGACGACTGCTACGCGAAGTTTCTTGGGATGGC CGATCGACCTCACATTCGTTACTCGGCGCTGTCGACGGAGCAGCAGCCGCATCAGCGTGC AGATCGACGGCATAGACTGGAGGACGATCTACGTTACAAATACGATCCCTTCAACCGCGT CCCCTGGAAGTCCATTGCGCTTGCCATCTTCTTACTTTCCTTTGGCACGCTGTGCCTGGT GTTCTCCTACCTCATCTTCTCTGGCCACATGGGTGGCGACTCCACGCAGGTTTATGGCTT CCTTACCATCGGACTTCTTGTCTTCATTCCAGGTTTTTATGAAACTCGAATTGCTTACTA TTCAATGCGAGGGGCGAATGGGTATACTTTTTCTCAAATTCCTGAATACTGATATTGCAG CACTAGCTGTTTGAGGGCATCAGACCTTTCCCTTGTAAACAATTGGCTCTTCATTCAAAT CATGGCCATCATGTTGACAGGGAGCTAACTTGATACATGTGTTTTGGTGTTGTCATTGAG TCTTCCCAGCCCAGCTTTTAACAAAATATACCTAATTACATTGTGGTTTGAATAGTAAGC AGTACAATTGCAGTGTCCTTCACCAAGTTTCACAACCGATTAGAGAAACATTTTTATGGG TTTTGATTTTTAAAAAAAAAAAAAA |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q5ZLH4 |
Definition |
sp|Q5ZLH4|CT030_CHICK UPF0414 transmembrane protein C20orf30 homolog OS=Gallus gallus |
Align length |
89 |
Score (bit) |
78.6 |
E-value |
3.0e-14 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
B4FHH3 |
Definition |
tr|B4FHH3|B4FHH3_MAIZE Putative uncharacterized protein OS=Zea mays |
Align length |
121 |
Score (bit) |
133.0 |
E-value |
9.0e-30 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK955163|Adiantum capillus-veneris mRNA, clone: TST39A01NGRL0022_F20, 5' (671 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|B4FHH3|B4FHH3_MAIZE Putative uncharacterized protein OS=Zea m... 133 9e-30 tr|A9PDG2|A9PDG2_POPTR Putative uncharacterized protein OS=Popul... 128 3e-28 tr|B8BLV0|B8BLV0_ORYSI Putative uncharacterized protein OS=Oryza... 125 2e-27 tr|Q9LVP2|Q9LVP2_ARATH Emb|CAB43660.1 (At3g29170) (Putative unch... 124 4e-27 tr|B8BIW9|B8BIW9_ORYSI Putative uncharacterized protein OS=Oryza... 124 4e-27 tr|A7PN07|A7PN07_VITVI Chromosome chr14 scaffold_21, whole genom... 124 7e-27 tr|Q2RAZ4|Q2RAZ4_ORYSJ Expressed protein OS=Oryza sativa subsp. ... 123 1e-26 tr|A9RNL1|A9RNL1_PHYPA Predicted protein (Fragment) OS=Physcomit... 118 4e-25 tr|A9T257|A9T257_PHYPA Predicted protein (Fragment) OS=Physcomit... 114 7e-24 tr|A9SHT6|A9SHT6_PHYPA Predicted protein (Fragment) OS=Physcomit... 107 5e-22 tr|Q0IUV7|Q0IUV7_ORYSJ Os11g0132400 protein (Fragment) OS=Oryza ... 87 9e-16 tr|Q2QY85|Q2QY85_ORYSJ Os12g0129000 protein OS=Oryza sativa subs... 84 6e-15 tr|B7FME0|B7FME0_MEDTR Putative uncharacterized protein OS=Medic... 81 5e-14 tr|B5FZ43|B5FZ43_TAEGU Putative uncharacterized protein OS=Taeni... 80 1e-13 tr|Q9SZQ6|Q9SZQ6_ARATH Putative uncharacterized protein F27B13.9... 80 1e-13 tr|O64568|O64568_ARATH Expressed protein (Putative uncharacteriz... 80 2e-13 tr|A7SGM3|A7SGM3_NEMVE Predicted protein OS=Nematostella vectens... 80 2e-13 tr|A5CB04|A5CB04_VITVI Putative uncharacterized protein OS=Vitis... 79 2e-13 tr|Q6GM26|Q6GM26_XENLA MGC84021 protein OS=Xenopus laevis GN=MGC... 79 3e-13 tr|Q6DET5|Q6DET5_XENTR MGC89669 protein OS=Xenopus tropicalis GN... 79 3e-13 tr|Q28C04|Q28C04_XENTR Novel protein OS=Xenopus tropicalis GN=TE... 79 3e-13 tr|A2AMQ1|A2AMQ1_MOUSE Orthologue of H. sapiens chromosome 20 op... 78 6e-13 tr|A9NYT5|A9NYT5_PICSI Putative uncharacterized protein OS=Picea... 77 8e-13 tr|A9SRL6|A9SRL6_PHYPA Predicted protein OS=Physcomitrella paten... 76 2e-12 tr|B2RDM8|B2RDM8_HUMAN Chromosome 20 open reading frame 30, isof... 75 3e-12 tr|B5X9I3|B5X9I3_SALSA UPF0414 transmembrane protein C20orf30 ho... 75 4e-12 tr|Q68EX6|Q68EX6_XENLA MGC84111 protein OS=Xenopus laevis GN=MGC... 75 5e-12 tr|Q68EJ3|Q68EJ3_DANRE Novel protein (Zgc:101123) OS=Danio rerio... 74 8e-12 tr|Q207T6|Q207T6_9ASPA Putative uncharacterized protein OS=Gymna... 73 1e-11 tr|A7E2V0|A7E2V0_DANRE Zgc:162251 protein OS=Danio rerio GN=zgc:... 72 2e-11
>tr|B4FHH3|B4FHH3_MAIZE Putative uncharacterized protein OS=Zea mays PE=4 SV=1 Length = 117
Score = 133 bits (335), Expect = 9e-30 Identities = 70/121 (57%), Positives = 83/121 (68%), Gaps = 3/121 (2%) Frame = +2
Query: 56 MADRPHIRYSALSTEQQPHQRADRRHRLED-DLRYKYDP--FNRVPWKSIALAIFLLSFG 226 MA R ++RYS L +E D ED DLRY Y P + R+PWKSIALA+FLL G Sbjct: 1 MAARRNVRYSPLPSEDGD----DSNFIKEDVDLRYTYTPKSYRRIPWKSIALALFLLLLG 56
Query: 227 TLCLVFSYLIFSGHMGGDSTQVYGFLTIGLLVFIPGFYETRIAYYSMRGANGYTFSQIPE 406 T L SY IF+GHM GDS+Q YG L +G L F+PGFYETR+AYYS RGA GYTF+ IP+ Sbjct: 57 TSLLFLSYFIFTGHMEGDSSQAYGLLFLGFLSFLPGFYETRVAYYSWRGAPGYTFASIPD 116
Query: 407 Y 409 Y Sbjct: 117 Y 117
>tr|A9PDG2|A9PDG2_POPTR Putative uncharacterized protein OS=Populus trichocarpa PE=4 SV=1 Length = 115
Score = 128 bits (322), Expect = 3e-28 Identities = 64/120 (53%), Positives = 82/120 (68%), Gaps = 2/120 (1%) Frame = +2
Query: 56 MADRPHIRYSALSTEQQPHQRADRRHRLEDDLRYKYDP--FNRVPWKSIALAIFLLSFGT 229 MA R ++RYS+L P D + + D R+ Y P F+RVPWKSI LAIFLL G Sbjct: 1 MASRRNVRYSSL-----PDDDNDDKFGVHYDPRFDYTPGSFDRVPWKSIFLAIFLLFLGC 55
Query: 230 LCLVFSYLIFSGHMGGDSTQVYGFLTIGLLVFIPGFYETRIAYYSMRGANGYTFSQIPEY 409 + L S+ IF+GHMGG+ +Q YG L +G++ F+PGFYETRIAYYS RGA GY F+ IP+Y Sbjct: 56 VLLSLSFFIFTGHMGGEKSQAYGLLALGIITFMPGFYETRIAYYSWRGAKGYQFASIPKY 115
>tr|B8BLV0|B8BLV0_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_37348 PE=4 SV=1 Length = 117
Score = 125 bits (315), Expect = 2e-27 Identities = 65/121 (53%), Positives = 82/121 (67%), Gaps = 3/121 (2%) Frame = +2
Query: 56 MADRPHIR-YSALSTEQQPHQRADRRHRLEDDLRYKYDP--FNRVPWKSIALAIFLLSFG 226 MA R ++R Y+ L TE R D + DLR+ Y P ++PWKSIALA+FLL G Sbjct: 1 MASRRNVRGYAPLPTED----RDDSNLTDDVDLRFTYTPKSLRKIPWKSIALALFLLLLG 56
Query: 227 TLCLVFSYLIFSGHMGGDSTQVYGFLTIGLLVFIPGFYETRIAYYSMRGANGYTFSQIPE 406 L SY IF+GHM GD++Q YG L +G+L F+PGFYETR+AYYS RGA GYTF+ IP+ Sbjct: 57 CSLLFLSYFIFTGHMEGDNSQAYGLLFLGILAFLPGFYETRVAYYSSRGAPGYTFASIPD 116
Query: 407 Y 409 Y Sbjct: 117 Y 117
>tr|Q9LVP2|Q9LVP2_ARATH Emb|CAB43660.1 (At3g29170) (Putative uncharacterized protein At3g29170) (Putative uncharacterized protein) OS=Arabidopsis thaliana GN=At3g29170 PE=2 SV=1 Length = 121
Score = 124 bits (312), Expect = 4e-27 Identities = 64/121 (52%), Positives = 80/121 (66%), Gaps = 3/121 (2%) Frame = +2
Query: 56 MADRPHIRYSALSTEQQPHQRADR-RHRLEDDLRYKYDP--FNRVPWKSIALAIFLLSFG 226 MA R +RY+ L ++ + R + D R+ Y P F+RVPWKSIALA+FLL G Sbjct: 1 MASRRSVRYAQLPGDEDDEGYGNGVGERRDFDPRFDYSPKAFDRVPWKSIALAVFLLFLG 60
Query: 227 TLCLVFSYLIFSGHMGGDSTQVYGFLTIGLLVFIPGFYETRIAYYSMRGANGYTFSQIPE 406 L L+ S+ IF GHM GDS+Q Y L +G+L F+PGFYETRIAYYS RGA GY F+ IP Sbjct: 61 CLLLLLSFFIFIGHMEGDSSQGYALLVLGILTFLPGFYETRIAYYSWRGAEGYRFAAIPS 120
Query: 407 Y 409 Y Sbjct: 121 Y 121
>tr|B8BIW9|B8BIW9_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_34971 PE=4 SV=1 Length = 117
Score = 124 bits (312), Expect = 4e-27 Identities = 65/121 (53%), Positives = 82/121 (67%), Gaps = 3/121 (2%) Frame = +2
Query: 56 MADRPHIR-YSALSTEQQPHQRADRRHRLEDDLRYKYDP--FNRVPWKSIALAIFLLSFG 226 MA R ++ Y+ L TE R D + DLR+ Y P ++PWKSIALA+FLL G Sbjct: 1 MASRRNVGGYAPLPTED----RDDSNLTDDVDLRFTYTPKSLRKIPWKSIALALFLLLLG 56
Query: 227 TLCLVFSYLIFSGHMGGDSTQVYGFLTIGLLVFIPGFYETRIAYYSMRGANGYTFSQIPE 406 L SY IF+GHM GD++QVYG L +G+L F+PGFYETR+AYYS RGA GYTF+ IP+ Sbjct: 57 CSLLFLSYFIFTGHMEGDNSQVYGLLFLGILAFLPGFYETRVAYYSSRGAPGYTFASIPD 116
Query: 407 Y 409 Y Sbjct: 117 Y 117
>tr|A7PN07|A7PN07_VITVI Chromosome chr14 scaffold_21, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00021018001 PE=4 SV=1 Length = 113
Score = 124 bits (310), Expect = 7e-27 Identities = 63/118 (53%), Positives = 78/118 (66%), Gaps = 2/118 (1%) Frame = +2
Query: 56 MADRPHIRYSALSTEQQPHQRADRRHRLEDDLRYKYDP--FNRVPWKSIALAIFLLSFGT 229 MA R ++RYS L ++ D + + D R+ Y P F+++PWKSIALA+FLL G Sbjct: 1 MASRRNVRYSRLLGDE------DNEYDSKFDPRFDYTPKSFDKIPWKSIALALFLLLLGI 54
Query: 230 LCLVFSYLIFSGHMGGDSTQVYGFLTIGLLVFIPGFYETRIAYYSMRGANGYTFSQIP 403 L L S IF+GHMGGD +Q YG L +G L F+PGFYETRIAYYS RGA GY F IP Sbjct: 55 LLLFLSIFIFTGHMGGDRSQAYGLLALGALTFLPGFYETRIAYYSWRGAAGYRFGSIP 112
>tr|Q2RAZ4|Q2RAZ4_ORYSJ Expressed protein OS=Oryza sativa subsp. japonica GN=LOC_Os11g03760 PE=4 SV=1 Length = 117
Score = 123 bits (308), Expect = 1e-26 Identities = 64/121 (52%), Positives = 81/121 (66%), Gaps = 3/121 (2%) Frame = +2
Query: 56 MADRPHIR-YSALSTEQQPHQRADRRHRLEDDLRYKYDP--FNRVPWKSIALAIFLLSFG 226 MA R ++ Y+ L TE R D + DLR+ Y P ++PWKSIALA+FLL G Sbjct: 1 MASRRNVGGYAPLPTED----RDDSNLTDDVDLRFTYTPKSLRKIPWKSIALALFLLLLG 56
Query: 227 TLCLVFSYLIFSGHMGGDSTQVYGFLTIGLLVFIPGFYETRIAYYSMRGANGYTFSQIPE 406 L SY IF+GHM GD++Q YG L +G+L F+PGFYETR+AYYS RGA GYTF+ IP+ Sbjct: 57 CSLLFLSYFIFTGHMEGDNSQAYGLLFLGILAFLPGFYETRVAYYSSRGAPGYTFASIPD 116
Query: 407 Y 409 Y Sbjct: 117 Y 117
>tr|A9RNL1|A9RNL1_PHYPA Predicted protein (Fragment) OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_28953 PE=4 SV=1 Length = 77
Score = 118 bits (295), Expect = 4e-25 Identities = 53/77 (68%), Positives = 65/77 (84%) Frame = +2
Query: 179 VPWKSIALAIFLLSFGTLCLVFSYLIFSGHMGGDSTQVYGFLTIGLLVFIPGFYETRIAY 358 VPWKSIALA+FLL+FGTL L+ ++ ++S HM G+ QVYGFL +G+L+F+PGFYETRIAY Sbjct: 1 VPWKSIALALFLLAFGTLFLILAHFLYSEHMEGEMEQVYGFLILGVLLFLPGFYETRIAY 60
Query: 359 YSMRGANGYTFSQIPEY 409 YS RGA GY FSQIP Y Sbjct: 61 YSWRGAKGYRFSQIPAY 77
>tr|A9T257|A9T257_PHYPA Predicted protein (Fragment) OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_19552 PE=4 SV=1 Length = 77
Score = 114 bits (284), Expect = 7e-24 Identities = 51/77 (66%), Positives = 64/77 (83%) Frame = +2
Query: 179 VPWKSIALAIFLLSFGTLCLVFSYLIFSGHMGGDSTQVYGFLTIGLLVFIPGFYETRIAY 358 VPWKSIALA+ LL+FG L LV S+ I++ HM GDS+Q YGFL +G+L+F+PGFYETRIAY Sbjct: 1 VPWKSIALAVVLLAFGCLFLVISHFIYTQHMEGDSSQAYGFLVLGILLFLPGFYETRIAY 60
Query: 359 YSMRGANGYTFSQIPEY 409 YS RG GY++S+IP Y Sbjct: 61 YSWRGYKGYSYSRIPAY 77
>tr|A9SHT6|A9SHT6_PHYPA Predicted protein (Fragment) OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_19551 PE=4 SV=1 Length = 77
Score = 107 bits (268), Expect = 5e-22 Identities = 48/77 (62%), Positives = 60/77 (77%) Frame = +2
Query: 179 VPWKSIALAIFLLSFGTLCLVFSYLIFSGHMGGDSTQVYGFLTIGLLVFIPGFYETRIAY 358 VPWKSIALA+ LL+FG L+ S+ I++ HM GDS+Q YGFL G+L+F+PGFYETRIAY Sbjct: 1 VPWKSIALAVVLLAFGCFFLIISHFIYTQHMEGDSSQAYGFLVAGILLFLPGFYETRIAY 60
Query: 359 YSMRGANGYTFSQIPEY 409 YS RG Y++S IP Y Sbjct: 61 YSWRGCKSYSYSCIPAY 77
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