DK955180 |
Clone id |
TST39A01NGRL0022_G13 |
Library |
TST39 |
Length |
598 |
Definition |
Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0022_G13. 5' end sequence. |
Accession |
DK955180 |
Tissue type |
prothallia with plantlets |
Developmental stage |
gametophytes with sporophytes |
Contig ID |
- |
Sequence |
AGCCCATAGGTGCAATGCTACCGGCAGAGTGTCAACCAGCAGCTGGCACCATGGGTGGCA AGAAGCAACAAGGCAAGAAAACTCAAGAAGGCGGTAGGAAACGCAAGAGGGCACCAAAGG ATAGCAGCCAACCACCACGGCGACGAGGACCCAAATCCTCACAGAAGGTAGAGATGCAGC CAGAAATTCCATCAGATGCAATGGTAGAGTTCAAGCCTGACTGCAATCTTGAAGAGATTC CCAGGACCAGCTATGGTGGTGATATGGCGCCATATGAGATGATGCTATCGATGCCCATAC CCTACTGCTCTTGCACAGGAGGCAATCAACAATGCTACAGGTGGGGGAAGGGAGGCTGGC AATCTGCATGTTGTACCAATGTGCTCTCTATGTACCCTCTGCCAATGAGTCCAGTAAAAC GTGGTGCAAGGGTCCCTGGTCGCAAAATGAGCGGTGGTGCATTCAAGAAAATTCTAGAAA AGCTAGCGGCAGACGGTTTTGACATTACCTTACCGATTGATCTTAAGAATCACTGGGCCA AGCATGGCACCAACAGATACGTTACCATAAAGTAACCCTAAGGCATCTTCTTACTTTT |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q9PTH3 |
Definition |
sp|Q9PTH3|IBP2_DANRE Insulin-like growth factor-binding protein 2 OS=Danio rerio |
Align length |
110 |
Score (bit) |
36.6 |
E-value |
0.098 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
B8LRA8 |
Definition |
tr|B8LRA8|B8LRA8_PICSI Putative uncharacterized protein OS=Picea sitchensis |
Align length |
95 |
Score (bit) |
169.0 |
E-value |
1.0e-40 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK955180|Adiantum capillus-veneris mRNA, clone: TST39A01NGRL0022_G13, 5' (598 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|B8LRA8|B8LRA8_PICSI Putative uncharacterized protein OS=Picea... 169 1e-40 tr|A7PHC8|A7PHC8_VITVI Chromosome chr17 scaffold_16, whole genom... 162 2e-38 tr|A5BC45|A5BC45_VITVI Putative uncharacterized protein OS=Vitis... 161 2e-38 tr|B8LNW9|B8LNW9_PICSI Putative uncharacterized protein OS=Picea... 160 4e-38 tr|Q8LKV1|Q8LKV1_SOYBN GAGA-binding protein OS=Glycine max GN=gb... 158 2e-37 tr|B2Z454|B2Z454_VITVI GAGA-binding transcriptional activator BB... 158 2e-37 tr|A7P412|A7P412_VITVI Chromosome chr1 scaffold_5, whole genome ... 158 2e-37 tr|A5AP61|A5AP61_VITVI Putative uncharacterized protein OS=Vitis... 158 2e-37 tr|Q8GUC3|Q8GUC3_HORVU Barley B recombinant OS=Hordeum vulgare G... 158 3e-37 tr|B7ZY75|B7ZY75_MAIZE Putative uncharacterized protein OS=Zea m... 157 3e-37 tr|B6TIV7|B6TIV7_MAIZE GAGA-binding protein OS=Zea mays PE=2 SV=1 157 4e-37 tr|Q9C9X6|Q9C9X6_ARATH Putative uncharacterized protein T23K23.3... 157 6e-37 tr|Q500V0|Q500V0_ARATH At1g68120 OS=Arabidopsis thaliana PE=2 SV=1 157 6e-37 tr|Q9LDE2|Q9LDE2_ARATH F10B6.5 (Basic pentacysteine 2) (At1g1468... 156 1e-36 tr|Q2PQS1|Q2PQS1_ARATH GAGA-binding transcriptional activator OS... 156 1e-36 tr|Q2PQR7|Q2PQR7_OLIPU GAGA-binding transcriptional activator OS... 156 1e-36 tr|Q2PQR3|Q2PQR3_9BRAS GAGA-binding transcriptional activator OS... 156 1e-36 tr|Q0PWL5|Q0PWL5_CARPT GAGA-binding transcriptional activator OS... 156 1e-36 tr|Q0PWL4|Q0PWL4_CARPT GAGA-binding transcriptional activator OS... 156 1e-36 tr|B6UBF1|B6UBF1_MAIZE GAGA-binding protein OS=Zea mays PE=2 SV=1 155 1e-36 tr|B2Z458|B2Z458_VITVI GAGA-binding transcriptional activator BB... 155 2e-36 tr|A8D1A0|A8D1A0_POPTR GAGA-motif binding transcriptional activa... 155 2e-36 tr|Q6Q0M8|Q6Q0M8_ORYSJ Os10g0114500 protein OS=Oryza sativa subs... 154 4e-36 tr|B8BFL7|B8BFL7_ORYSI Putative uncharacterized protein OS=Oryza... 154 4e-36 tr|B8BFL6|B8BFL6_ORYSI Putative uncharacterized protein OS=Oryza... 154 4e-36 tr|A8D197|A8D197_POPTR GAGA-motif binding transcriptional activa... 154 5e-36 tr|Q93VZ9|Q93VZ9_ORYSJ Putative uncharacterized protein OSJNBa00... 153 6e-36 tr|B4F7V9|B4F7V9_MAIZE GAGA-binding protein OS=Zea mays PE=2 SV=1 153 6e-36 tr|A5A510|A5A510_BRARP GAGA-binding transcriptional activator OS... 153 6e-36 tr|Q0PWL2|Q0PWL2_CARPT GAGA-binding transcriptional activator OS... 152 1e-35
>tr|B8LRA8|B8LRA8_PICSI Putative uncharacterized protein OS=Picea sitchensis PE=2 SV=1 Length = 334
Score = 169 bits (427), Expect = 1e-40 Identities = 72/95 (75%), Positives = 81/95 (85%) Frame = +3
Query: 288 SMPIPYCSCTGGNQQCYRWGKGGWQSACCTNVLSMYPLPMSPVKRGARVPGRKMSGGAFK 467 SMPIPYCSCTG NQ CYRWG GGWQSACCT ++SMYPLPM+P K+G R PGRKMS GAF+ Sbjct: 240 SMPIPYCSCTGANQPCYRWGNGGWQSACCTTMMSMYPLPMNPNKKGYRFPGRKMSAGAFQ 299
Query: 468 KILEKLAADGFDITLPIDLKNHWAKHGTNRYVTIK 572 K+L +L+ G D+T PIDLK HWAKHGTNRYVTIK Sbjct: 300 KLLVRLSLQGIDVTKPIDLKEHWAKHGTNRYVTIK 334
>tr|A7PHC8|A7PHC8_VITVI Chromosome chr17 scaffold_16, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00017893001 PE=4 SV=1 Length = 285
Score = 162 bits (409), Expect = 2e-38 Identities = 78/150 (52%), Positives = 101/150 (67%) Frame = +3
Query: 123 SSQPPRRRGPKSSQKVEMQPEIPSDAMVEFKPDCNLEEIPRTSYGGDMAPYEMMLSMPIP 302 + + P+ + PK + KV PS + KP E+ D++ +PIP Sbjct: 144 TQKSPKAKKPKRAPKVPKDESSPS--VQRAKPGKKNTEVVINGIDMDIS------GIPIP 195
Query: 303 YCSCTGGNQQCYRWGKGGWQSACCTNVLSMYPLPMSPVKRGARVPGRKMSGGAFKKILEK 482 CSCTG QQCYRWG GGWQSACCT +S+YPLPMS +RGAR+ GRKMS GAFKK+LEK Sbjct: 196 VCSCTGAPQQCYRWGSGGWQSACCTTGMSIYPLPMSTKRRGARIAGRKMSLGAFKKVLEK 255
Query: 483 LAADGFDITLPIDLKNHWAKHGTNRYVTIK 572 LAA+G++ + PIDL+ HWAKHGTN++VTI+ Sbjct: 256 LAAEGYNFSNPIDLRTHWAKHGTNKFVTIR 285
>tr|A5BC45|A5BC45_VITVI Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_020594 PE=4 SV=1 Length = 340
Score = 161 bits (408), Expect = 2e-38 Identities = 78/149 (52%), Positives = 100/149 (67%) Frame = +3
Query: 123 SSQPPRRRGPKSSQKVEMQPEIPSDAMVEFKPDCNLEEIPRTSYGGDMAPYEMMLSMPIP 302 + + P+ + PK + KV PS + KP E+ D++ +PIP Sbjct: 144 TQKSPKAKKPKQAPKVPKDESSPS--VQRAKPGKKNTEVVINGIDMDIS------GIPIP 195
Query: 303 YCSCTGGNQQCYRWGKGGWQSACCTNVLSMYPLPMSPVKRGARVPGRKMSGGAFKKILEK 482 CSCTG QQCYRWG GGWQSACCT +S+YPLPMS +RGAR+ GRKMS GAFKK+LEK Sbjct: 196 VCSCTGAPQQCYRWGSGGWQSACCTTGMSIYPLPMSTKRRGARIAGRKMSLGAFKKVLEK 255
Query: 483 LAADGFDITLPIDLKNHWAKHGTNRYVTI 569 LAA+G++ + PIDL+ HWAKHGTN++VTI Sbjct: 256 LAAEGYNFSNPIDLRTHWAKHGTNKFVTI 284
>tr|B8LNW9|B8LNW9_PICSI Putative uncharacterized protein OS=Picea sitchensis PE=2 SV=1 Length = 313
Score = 160 bits (406), Expect = 4e-38 Identities = 67/95 (70%), Positives = 84/95 (88%) Frame = +3
Query: 288 SMPIPYCSCTGGNQQCYRWGKGGWQSACCTNVLSMYPLPMSPVKRGARVPGRKMSGGAFK 467 +MPIP C+CTG QQCYRWG GGWQSACCT +SMYPLPM+P +RGARV GRKMSGGAF+ Sbjct: 219 AMPIPVCTCTGVAQQCYRWGNGGWQSACCTTSISMYPLPMNPNRRGARVAGRKMSGGAFR 278
Query: 468 KILEKLAADGFDITLPIDLKNHWAKHGTNRYVTIK 572 K+LE+L A+G+++ PIDLK++WAKHGTN++VTI+ Sbjct: 279 KLLERLGAEGYNLNYPIDLKSYWAKHGTNKFVTIR 313
>tr|Q8LKV1|Q8LKV1_SOYBN GAGA-binding protein OS=Glycine max GN=gbp PE=2 SV=1 Length = 282
Score = 158 bits (400), Expect = 2e-37 Identities = 80/153 (52%), Positives = 107/153 (69%), Gaps = 1/153 (0%) Frame = +3
Query: 117 KDSSQPPRRRGPKSSQKVEMQPEIPSDAMVEFKPDCNLEEIPRTSYGGDMAPYEMMLS-M 293 + SS+ P+ PK+ +K + P P D E P IP+ + + +M +S + Sbjct: 136 RQSSKVPK--SPKA-KKPKRGPRAPKD---ESAPAVQRARIPKKTTEIVINGIDMDISSI 189
Query: 294 PIPYCSCTGGNQQCYRWGKGGWQSACCTNVLSMYPLPMSPVKRGARVPGRKMSGGAFKKI 473 PIP CSCTG QQCY+WG GGWQSACCT +S+YPLPMS +RGAR+ GRKMS GAFKK+ Sbjct: 190 PIPVCSCTGAPQQCYKWGSGGWQSACCTTGMSVYPLPMSTKRRGARIAGRKMSIGAFKKV 249
Query: 474 LEKLAADGFDITLPIDLKNHWAKHGTNRYVTIK 572 LEKLAA+G++ + PIDL+ +WAKHGTN++VTI+ Sbjct: 250 LEKLAAEGYNFSNPIDLRTYWAKHGTNKFVTIR 282
>tr|B2Z454|B2Z454_VITVI GAGA-binding transcriptional activator BBR/BPC1-like OS=Vitis vinifera PE=2 SV=1 Length = 293
Score = 158 bits (400), Expect = 2e-37 Identities = 68/94 (72%), Positives = 80/94 (85%) Frame = +3
Query: 291 MPIPYCSCTGGNQQCYRWGKGGWQSACCTNVLSMYPLPMSPVKRGARVPGRKMSGGAFKK 470 +PIP CSCTG QQCYRWG GGWQSACCT +SMYPLPMS +RGAR+ GRKMS GAFKK Sbjct: 200 IPIPVCSCTGNPQQCYRWGCGGWQSACCTTSISMYPLPMSTKRRGARIAGRKMSQGAFKK 259
Query: 471 ILEKLAADGFDITLPIDLKNHWAKHGTNRYVTIK 572 +LEKLAA+G++ PIDL+ HWAKHGTN++VTI+ Sbjct: 260 VLEKLAAEGYNFANPIDLRRHWAKHGTNKFVTIR 293
>tr|A7P412|A7P412_VITVI Chromosome chr1 scaffold_5, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00030652001 PE=4 SV=1 Length = 162
Score = 158 bits (400), Expect = 2e-37 Identities = 68/94 (72%), Positives = 80/94 (85%) Frame = +3
Query: 291 MPIPYCSCTGGNQQCYRWGKGGWQSACCTNVLSMYPLPMSPVKRGARVPGRKMSGGAFKK 470 +PIP CSCTG QQCYRWG GGWQSACCT +SMYPLPMS +RGAR+ GRKMS GAFKK Sbjct: 69 IPIPVCSCTGNPQQCYRWGCGGWQSACCTTSISMYPLPMSTKRRGARIAGRKMSQGAFKK 128
Query: 471 ILEKLAADGFDITLPIDLKNHWAKHGTNRYVTIK 572 +LEKLAA+G++ PIDL+ HWAKHGTN++VTI+ Sbjct: 129 VLEKLAAEGYNFANPIDLRRHWAKHGTNKFVTIR 162
>tr|A5AP61|A5AP61_VITVI Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_038800 PE=4 SV=1 Length = 411
Score = 158 bits (400), Expect = 2e-37 Identities = 68/94 (72%), Positives = 80/94 (85%) Frame = +3
Query: 291 MPIPYCSCTGGNQQCYRWGKGGWQSACCTNVLSMYPLPMSPVKRGARVPGRKMSGGAFKK 470 +PIP CSCTG QQCYRWG GGWQSACCT +SMYPLPMS +RGAR+ GRKMS GAFKK Sbjct: 200 IPIPVCSCTGNPQQCYRWGCGGWQSACCTTSISMYPLPMSTKRRGARIAGRKMSQGAFKK 259
Query: 471 ILEKLAADGFDITLPIDLKNHWAKHGTNRYVTIK 572 +LEKLAA+G++ PIDL+ HWAKHGTN++VTI+ Sbjct: 260 VLEKLAAEGYNFANPIDLRRHWAKHGTNKFVTIR 293
>tr|Q8GUC3|Q8GUC3_HORVU Barley B recombinant OS=Hordeum vulgare GN=bbr PE=4 SV=1 Length = 350
Score = 158 bits (399), Expect = 3e-37 Identities = 76/157 (48%), Positives = 101/157 (64%), Gaps = 8/157 (5%) Frame = +3
Query: 126 SQPPRRRGPKSSQKVEMQPEIPSDAMVEFKPDCNLEEIPRTSYGGDMAPYEMMLS----- 290 S+PP ++ + Q +P+ P + PR+ G + P EM+++ Sbjct: 196 SKPPVKKRQQGRQPKVPKPKKPKKDATPGEDGAPKARAPRSR--GPLKPVEMVINGIDFD 253
Query: 291 ---MPIPYCSCTGGNQQCYRWGKGGWQSACCTNVLSMYPLPMSPVKRGARVPGRKMSGGA 461 +P P CSCTG QQCYRWG GGWQSACCT +S YPLPM+ +RGAR+ GRKMS GA Sbjct: 254 ISRIPTPVCSCTGAPQQCYRWGAGGWQSACCTTSISTYPLPMNTKRRGARIAGRKMSQGA 313
Query: 462 FKKILEKLAADGFDITLPIDLKNHWAKHGTNRYVTIK 572 FKK+LEKLA +G+++ PIDLK WAKHGTN++VTI+ Sbjct: 314 FKKVLEKLAGEGYNLNNPIDLKTFWAKHGTNKFVTIR 350
>tr|B7ZY75|B7ZY75_MAIZE Putative uncharacterized protein OS=Zea mays PE=2 SV=1 Length = 184
Score = 157 bits (398), Expect = 3e-37 Identities = 79/159 (49%), Positives = 103/159 (64%), Gaps = 6/159 (3%) Frame = +3
Query: 114 PKDSSQPPRRRGPKSSQKVEMQPEIPSDAMVEFKPDCNLEEIPRT-----SYGGDMAPYE 278 P ++PP ++ + Q ++P P A V + E PR + G + E Sbjct: 26 PDPDTKPPVKKRWQVRQPKSLKPRKPKKAAVPPENGALNEHAPRRRGPKKTVGMVINGIE 85
Query: 279 MMLS-MPIPYCSCTGGNQQCYRWGKGGWQSACCTNVLSMYPLPMSPVKRGARVPGRKMSG 455 + L+ +P P CSCTG QQCYRWG GGWQSACCT +S YPLPMS +RGAR+ GRKMS Sbjct: 86 LDLANIPTPVCSCTGAPQQCYRWGAGGWQSACCTTSISTYPLPMSTKRRGARIAGRKMSQ 145
Query: 456 GAFKKILEKLAADGFDITLPIDLKNHWAKHGTNRYVTIK 572 GAFKK+LEKLA +G+++ PIDLK WAKHGTN++VTI+ Sbjct: 146 GAFKKVLEKLAGEGYNLANPIDLKTFWAKHGTNKFVTIR 184
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