DK955200 |
Clone id |
TST39A01NGRL0022_H10 |
Library |
TST39 |
Length |
634 |
Definition |
Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0022_H10. 5' end sequence. |
Accession |
DK955200 |
Tissue type |
prothallia with plantlets |
Developmental stage |
gametophytes with sporophytes |
Contig ID |
CL1083Contig1 |
Sequence |
GCACAAAAAAAAATTTGTTTGGTAATAAGGGAGAGAAGCTTTCTCCCTCCACTCTCTCCC CCCTCTCGCAGCAAGTCATGGCGTACAGATCTGATGATGACTACGATTACCTGTTCAAGG TGGTGCTGATAGGCGATTCGGGCGTTGGCAAGTCCAACTTGCTATCCAGATTCACTCGCA ACGAGTTCAGTCTCGAGTCCAAGTCCACCATTGGGGTAGAGTTTGCTACACGCAGCATCA ACGTCGATGGCAAGACGATCAAGGCACAGATCTGGGACACTGCCGGCCAAGAAAGGTACA GAGCCATTACCAGTGCGTACTACCGAGGTGCAGTGGGTGCATTGTTGGTATATGATATAA CAAGACATGTGACATTTGAGAACGTTGAGCGGTGGTTGAAGGAGCTGAAGGATCACACGG ATTCGAATATCGTGGTTATGCTGGTGGGCAACAAGTCCGATCTACGTCATCTAAGAGCAG TATCAGCGGACGACAGCCAGGCTTTTGCAGAGAGAGAGGGTCTGTACTTCATGGAAACGT CGGCCTTGGAATCAACAAATGTAGAGAATGCATTCAAGCAAATTCTTACTCAGATTTATA GGGTTGTCAGCAAGAAAGCCCTCGATATTGGCGA |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
P40393 |
Definition |
sp|P40393|RIC2_ORYSJ Ras-related protein RIC2 OS=Oryza sativa subsp. japonica |
Align length |
183 |
Score (bit) |
321.0 |
E-value |
2.0e-87 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A9NV29 |
Definition |
tr|A9NV29|A9NV29_PICSI Putative uncharacterized protein OS=Picea sitchensis |
Align length |
184 |
Score (bit) |
342.0 |
E-value |
1.0e-92 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK955200|Adiantum capillus-veneris mRNA, clone: TST39A01NGRL0022_H10, 5' (634 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|A9NV29|A9NV29_PICSI Putative uncharacterized protein OS=Picea... 342 1e-92 tr|A9NZD1|A9NZD1_PICSI Putative uncharacterized protein OS=Picea... 333 4e-90 tr|A7QPP6|A7QPP6_VITVI Chromosome chr10 scaffold_138, whole geno... 328 1e-88 tr|Q68HC1|Q68HC1_WHEAT Rab GTP-binding protein OS=Triticum aesti... 328 2e-88 tr|Q6AUF8|Q6AUF8_ORYSJ Os05g0564400 protein OS=Oryza sativa subs... 328 2e-88 tr|A7P1V6|A7P1V6_VITVI Chromosome chr19 scaffold_4, whole genome... 327 3e-88 tr|Q0J2L0|Q0J2L0_ORYSJ Os09g0327100 protein (Fragment) OS=Oryza ... 327 4e-88 tr|Q6K2P6|Q6K2P6_ORYSJ cDNA clone:J023092H24, full insert sequen... 326 6e-88 tr|A2YZX0|A2YZX0_ORYSI Putative uncharacterized protein OS=Oryza... 326 6e-88 tr|B4FE06|B4FE06_MAIZE Putative uncharacterized protein OS=Zea m... 325 1e-87 tr|A5ART2|A5ART2_VITVI Putative uncharacterized protein OS=Vitis... 325 1e-87 tr|Q9FJH0|Q9FJH0_ARATH GTP-binding protein, ras-like (At5g60860)... 325 2e-87 tr|Q08149|Q08149_PEA GTP-binding protein OS=Pisum sativum PE=2 SV=1 325 2e-87 tr|A9P9U7|A9P9U7_POPTR Putative uncharacterized protein OS=Popul... 323 5e-87 tr|A7QDG9|A7QDG9_VITVI Chromosome chr10 scaffold_81, whole genom... 323 5e-87 tr|B4FQ28|B4FQ28_MAIZE Putative uncharacterized protein OS=Zea m... 322 9e-87 tr|B4FIB2|B4FIB2_MAIZE Putative uncharacterized protein OS=Zea m... 322 9e-87 tr|A9T2Z0|A9T2Z0_PHYPA Rab11/RabA-family small GTPase OS=Physcom... 322 1e-86 tr|Q9LK99|Q9LK99_ARATH GTP-binding protein-like (Putative Ras fa... 322 2e-86 tr|Q0DBM2|Q0DBM2_ORYSJ Os06g0551400 protein OS=Oryza sativa subs... 321 2e-86 tr|A9TDJ8|A9TDJ8_PHYPA Rab11/RabA-family small GTPase OS=Physcom... 321 2e-86 tr|A9SJB2|A9SJB2_PHYPA Predicted protein OS=Physcomitrella paten... 321 2e-86 tr|A2YDY6|A2YDY6_ORYSI Putative uncharacterized protein OS=Oryza... 321 2e-86 tr|B6TJP1|B6TJP1_MAIZE Ras-related protein RIC2 OS=Zea mays PE=2... 320 3e-86 tr|A9RQ44|A9RQ44_PHYPA Rab11/RabA-family small GTPase OS=Physcom... 320 4e-86 tr|B6TX62|B6TX62_MAIZE Ras-related protein Rab11B OS=Zea mays PE... 319 8e-86 tr|A9RSL8|A9RSL8_PHYPA Rab11/RabA-family small GTPase OS=Physcom... 319 8e-86 tr|Q9SN35|Q9SN35_ARATH Ras-like GTP-binding protein (Putative ra... 318 2e-85 tr|B2ZAR1|B2ZAR1_GOSRA Putative GTP-binding protein OS=Gossypium... 317 5e-85 tr|A9PCP6|A9PCP6_POPTR Putative uncharacterized protein OS=Popul... 317 5e-85
>tr|A9NV29|A9NV29_PICSI Putative uncharacterized protein OS=Picea sitchensis PE=2 SV=1 Length = 216
Score = 342 bits (876), Expect = 1e-92 Identities = 170/184 (92%), Positives = 179/184 (97%) Frame = +3
Query: 78 MAYRSDDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSINVDGKT 257 MAY+ DDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSINVDGK Sbjct: 1 MAYKVDDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSINVDGKM 60
Query: 258 IKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITRHVTFENVERWLKELKDHTDSNIVV 437 IKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITRHVTFENVERWLKEL+DHT+ NIVV Sbjct: 61 IKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITRHVTFENVERWLKELRDHTEHNIVV 120
Query: 438 MLVGNKSDLRHLRAVSADDSQAFAEREGLYFMETSALESTNVENAFKQILTQIYRVVSKK 617 MLVGNKSDLRHLRAVS +D+Q FAEREGLYF+ETSALESTNVENAFKQ+LTQIYR+VSKK Sbjct: 121 MLVGNKSDLRHLRAVSTEDAQTFAEREGLYFIETSALESTNVENAFKQVLTQIYRIVSKK 180
Query: 618 ALDI 629 ALD+ Sbjct: 181 ALDV 184
>tr|A9NZD1|A9NZD1_PICSI Putative uncharacterized protein OS=Picea sitchensis PE=2 SV=1 Length = 217
Score = 333 bits (855), Expect = 4e-90 Identities = 164/185 (88%), Positives = 177/185 (95%) Frame = +3
Query: 78 MAYRSDDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSINVDGKT 257 MAYR+DDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSI VD K Sbjct: 1 MAYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSITVDDKV 60
Query: 258 IKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITRHVTFENVERWLKELKDHTDSNIVV 437 IKAQIWDTAGQERYRAITSAYYRGAVGALLVYD+TRHVTFENVERWLKEL+DHTD+NIV+ Sbjct: 61 IKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDANIVI 120
Query: 438 MLVGNKSDLRHLRAVSADDSQAFAEREGLYFMETSALESTNVENAFKQILTQIYRVVSKK 617 MLVGNK+DLRHLRAVS +D +AFAERE YFMETSALESTNVENAF ++L+QIYR+VSKK Sbjct: 121 MLVGNKADLRHLRAVSIEDGKAFAERENTYFMETSALESTNVENAFTEVLSQIYRIVSKK 180
Query: 618 ALDIG 632 ALD+G Sbjct: 181 ALDVG 185
>tr|A7QPP6|A7QPP6_VITVI Chromosome chr10 scaffold_138, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00003022001 PE=3 SV=1 Length = 217
Score = 328 bits (842), Expect = 1e-88 Identities = 162/184 (88%), Positives = 176/184 (95%) Frame = +3
Query: 81 AYRSDDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSINVDGKTI 260 +YR+DDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSI VD K + Sbjct: 3 SYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVDDKVV 62
Query: 261 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDITRHVTFENVERWLKELKDHTDSNIVVM 440 KAQIWDTAGQERYRAITSAYYRGAVGALLVYD+TRHVTFENVERWLKEL+DHTDSNIV+M Sbjct: 63 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIM 122
Query: 441 LVGNKSDLRHLRAVSADDSQAFAEREGLYFMETSALESTNVENAFKQILTQIYRVVSKKA 620 LVGNK+DLRHLRAVS +D++AFAERE +FMETSALES NVENAF ++LTQIYRVVS+KA Sbjct: 123 LVGNKADLRHLRAVSTEDAKAFAERENNFFMETSALESMNVENAFTEVLTQIYRVVSRKA 182
Query: 621 LDIG 632 LDIG Sbjct: 183 LDIG 186
>tr|Q68HC1|Q68HC1_WHEAT Rab GTP-binding protein OS=Triticum aestivum PE=2 SV=1 Length = 216
Score = 328 bits (841), Expect = 2e-88 Identities = 162/185 (87%), Positives = 177/185 (95%) Frame = +3
Query: 78 MAYRSDDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSINVDGKT 257 MAYR+DDDYDYLFKVVLIGDSGVGKSNLL+RFTRNEFSLESKSTIGVEFATRSI VD K Sbjct: 1 MAYRADDDYDYLFKVVLIGDSGVGKSNLLTRFTRNEFSLESKSTIGVEFATRSIRVDDKV 60
Query: 258 IKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITRHVTFENVERWLKELKDHTDSNIVV 437 +KAQIWDTAGQERYRAITSAYYRGAVGAL+VYD+TRHVTFENVERWLKELKDHTD+NIV+ Sbjct: 61 VKAQIWDTAGQERYRAITSAYYRGAVGALVVYDVTRHVTFENVERWLKELKDHTDANIVI 120
Query: 438 MLVGNKSDLRHLRAVSADDSQAFAEREGLYFMETSALESTNVENAFKQILTQIYRVVSKK 617 MLVGNK+DLRHLRAVS +D++AFAERE +FMETSALES NVE+AF ++LTQIYRVVSKK Sbjct: 121 MLVGNKADLRHLRAVSVEDAKAFAEREYTFFMETSALESMNVEDAFTEVLTQIYRVVSKK 180
Query: 618 ALDIG 632 ALDIG Sbjct: 181 ALDIG 185
>tr|Q6AUF8|Q6AUF8_ORYSJ Os05g0564400 protein OS=Oryza sativa subsp. japonica GN=OSJNBb0053D02.13 PE=2 SV=1 Length = 217
Score = 328 bits (840), Expect = 2e-88 Identities = 160/185 (86%), Positives = 177/185 (95%) Frame = +3
Query: 78 MAYRSDDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSINVDGKT 257 MAYR+DDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSI+VD K Sbjct: 1 MAYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIHVDDKV 60
Query: 258 IKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITRHVTFENVERWLKELKDHTDSNIVV 437 +KAQIWDTAGQERYRAITSAYYRGAVGAL+VYD+TRHVTFENVERW++ELKDHTD+NIV+ Sbjct: 61 VKAQIWDTAGQERYRAITSAYYRGAVGALVVYDVTRHVTFENVERWMRELKDHTDANIVI 120
Query: 438 MLVGNKSDLRHLRAVSADDSQAFAEREGLYFMETSALESTNVENAFKQILTQIYRVVSKK 617 MLVGNK+DLRHLRAVS +D++AFAE+E +FMETSALES NVENAF ++LTQIY VVSKK Sbjct: 121 MLVGNKADLRHLRAVSTEDAKAFAEKENTFFMETSALESMNVENAFTEVLTQIYHVVSKK 180
Query: 618 ALDIG 632 ALDIG Sbjct: 181 ALDIG 185
>tr|A7P1V6|A7P1V6_VITVI Chromosome chr19 scaffold_4, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00027768001 PE=3 SV=1 Length = 217
Score = 327 bits (839), Expect = 3e-88 Identities = 162/184 (88%), Positives = 175/184 (95%) Frame = +3
Query: 81 AYRSDDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSINVDGKTI 260 AYR+DDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSI VD K + Sbjct: 3 AYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVDDKIV 62
Query: 261 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDITRHVTFENVERWLKELKDHTDSNIVVM 440 KAQIWDTAGQERYRAITSAYYRGAVGALLVYD+TRHVTFENVERWLKEL+DHTDS+IV+M Sbjct: 63 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSHIVIM 122
Query: 441 LVGNKSDLRHLRAVSADDSQAFAEREGLYFMETSALESTNVENAFKQILTQIYRVVSKKA 620 LVGNK DLRHLRAVS DD++AFAERE +FMETSALES NVENAF ++LTQIY+VVS+KA Sbjct: 123 LVGNKGDLRHLRAVSIDDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYQVVSRKA 182
Query: 621 LDIG 632 LDIG Sbjct: 183 LDIG 186
>tr|Q0J2L0|Q0J2L0_ORYSJ Os09g0327100 protein (Fragment) OS=Oryza sativa subsp. japonica GN=Os09g0327100 PE=3 SV=1 Length = 257
Score = 327 bits (838), Expect = 4e-88 Identities = 160/187 (85%), Positives = 177/187 (94%) Frame = +3
Query: 72 QVMAYRSDDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSINVDG 251 + MAYR++DDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSI VD Sbjct: 40 EAMAYRAEDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVDD 99
Query: 252 KTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITRHVTFENVERWLKELKDHTDSNI 431 K +KAQIWDTAGQERYRAITSAYYRGAVGAL+VYD+TRHVTFENVERWLKEL+DHTD+NI Sbjct: 100 KVVKAQIWDTAGQERYRAITSAYYRGAVGALVVYDVTRHVTFENVERWLKELRDHTDANI 159
Query: 432 VVMLVGNKSDLRHLRAVSADDSQAFAEREGLYFMETSALESTNVENAFKQILTQIYRVVS 611 V+MLVGNK+DLRHLRAVS +D++ FAERE +FMETSALES NVE+AF ++LTQIYRVVS Sbjct: 160 VIMLVGNKADLRHLRAVSVEDAKGFAERESTFFMETSALESMNVESAFTEVLTQIYRVVS 219
Query: 612 KKALDIG 632 KKALDIG Sbjct: 220 KKALDIG 226
>tr|Q6K2P6|Q6K2P6_ORYSJ cDNA clone:J023092H24, full insert sequence OS=Oryza sativa subsp. japonica GN=P0706E03.6 PE=2 SV=1 Length = 216
Score = 326 bits (836), Expect = 6e-88 Identities = 160/185 (86%), Positives = 176/185 (95%) Frame = +3
Query: 78 MAYRSDDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSINVDGKT 257 MAYR++DDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSI VD K Sbjct: 1 MAYRAEDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVDDKV 60
Query: 258 IKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITRHVTFENVERWLKELKDHTDSNIVV 437 +KAQIWDTAGQERYRAITSAYYRGAVGAL+VYD+TRHVTFENVERWLKEL+DHTD+NIV+ Sbjct: 61 VKAQIWDTAGQERYRAITSAYYRGAVGALVVYDVTRHVTFENVERWLKELRDHTDANIVI 120
Query: 438 MLVGNKSDLRHLRAVSADDSQAFAEREGLYFMETSALESTNVENAFKQILTQIYRVVSKK 617 MLVGNK+DLRHLRAVS +D++ FAERE +FMETSALES NVE+AF ++LTQIYRVVSKK Sbjct: 121 MLVGNKADLRHLRAVSVEDAKGFAERESTFFMETSALESMNVESAFTEVLTQIYRVVSKK 180
Query: 618 ALDIG 632 ALDIG Sbjct: 181 ALDIG 185
>tr|A2YZX0|A2YZX0_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_30905 PE=3 SV=1 Length = 216
Score = 326 bits (836), Expect = 6e-88 Identities = 160/185 (86%), Positives = 176/185 (95%) Frame = +3
Query: 78 MAYRSDDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSINVDGKT 257 MAYR++DDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSI VD K Sbjct: 1 MAYRAEDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVDDKV 60
Query: 258 IKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITRHVTFENVERWLKELKDHTDSNIVV 437 +KAQIWDTAGQERYRAITSAYYRGAVGAL+VYD+TRHVTFENVERWLKEL+DHTD+NIV+ Sbjct: 61 VKAQIWDTAGQERYRAITSAYYRGAVGALVVYDVTRHVTFENVERWLKELRDHTDANIVI 120
Query: 438 MLVGNKSDLRHLRAVSADDSQAFAEREGLYFMETSALESTNVENAFKQILTQIYRVVSKK 617 MLVGNK+DLRHLRAVS +D++ FAERE +FMETSALES NVE+AF ++LTQIYRVVSKK Sbjct: 121 MLVGNKADLRHLRAVSVEDAKGFAERESTFFMETSALESMNVESAFTEVLTQIYRVVSKK 180
Query: 618 ALDIG 632 ALDIG Sbjct: 181 ALDIG 185
>tr|B4FE06|B4FE06_MAIZE Putative uncharacterized protein OS=Zea mays PE=2 SV=1 Length = 216
Score = 325 bits (833), Expect = 1e-87 Identities = 160/185 (86%), Positives = 176/185 (95%) Frame = +3
Query: 78 MAYRSDDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSINVDGKT 257 MAYR++DDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSI VD K Sbjct: 1 MAYRAEDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVDDKV 60
Query: 258 IKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITRHVTFENVERWLKELKDHTDSNIVV 437 +KAQIWDTAGQERYRAITSAYYRGAVGAL+VYD+TRHVTFENVERWLKEL+DHTD+NIV+ Sbjct: 61 VKAQIWDTAGQERYRAITSAYYRGAVGALVVYDVTRHVTFENVERWLKELRDHTDANIVI 120
Query: 438 MLVGNKSDLRHLRAVSADDSQAFAEREGLYFMETSALESTNVENAFKQILTQIYRVVSKK 617 MLVGNK+DLRHLRAVS +D++ FAERE +FMETSALES NVE+AF ++LTQIYRVVSKK Sbjct: 121 MLVGNKADLRHLRAVSVEDAKGFAEREMTFFMETSALESMNVESAFTEVLTQIYRVVSKK 180
Query: 618 ALDIG 632 ALDIG Sbjct: 181 ALDIG 185
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