DK955202
Clone id TST39A01NGRL0022_H12
Library
Length 593
Definition Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0022_H12. 5' end sequence.
Accession
Tissue type prothallia with plantlets
Developmental stage gametophytes with sporophytes
Contig ID
Sequence
GCAGCTCTCGTTTATTAAAATGGTGTCCTCCCCGCCTCGCTCTCCTACACCGATAGTCCC
CGCCATTTTCGCCCTTGCTATGGATGTTCCGGACTATCTCCCGCTTCAATGGAATAAAGC
ACAGGATGACAAACCATTAGGTCCTCGCTTCGACATGACAGCAGAAGAGGCAATTAGCTG
TCAATTAGAAGCTTTACGCAACAATGATCATCCTCATGCAGATTATGGTGTGGAGGTTAT
GTATAAGTTTGCTGGTTTTGACCCTTTTGAGCGCTCTACGTACTTTGGACCCTTCTTTGA
TTTAGGACAGTTTGAAAGGTTTAGACGGATATTTCATCATTCCACCTATCGGGTACTCCT
TGGTCATAAGGAAGCACAGACTCTGAGCAGCTTATATGTTAACGAGCATTGTTTCAAGCA
AAGGGTGTGGGTTATGGGGGCACGTCCGAATGAAGAGGAGATTTTCGAGTTCACTCTGTT
GCAAAGAGTTGGTGGCTGCTGGGATGGCTATTGGTTAACTCAAAGCCTTCGCCATGATGG
TGATGGCATCAGTGGTGGTATAGCTTACTAGTTCGCTATTGAACTAGTTTTTG
■■Homology search results ■■ -
sp_hit_id Q6NYU2
Definition sp|Q6NYU2|HELZ_DANRE Probable helicase with zinc finger domain OS=Danio rerio
Align length 87
Score (bit) 30.4
E-value 7.0
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK955202|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0022_H12, 5'
(593 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q6NYU2|HELZ_DANRE Probable helicase with zinc finger domain O... 30 7.0
sp|Q5UNW8|YL719_MIMIV Uncharacterized protein L719 OS=Acanthamoe... 30 9.1
sp|Q02403|T231E_BACTF Transposase for insertion sequence element... 30 9.1

>sp|Q6NYU2|HELZ_DANRE Probable helicase with zinc finger domain
OS=Danio rerio GN=helz PE=2 SV=1
Length = 1860

Score = 30.4 bits (67), Expect = 7.0
Identities = 25/87 (28%), Positives = 35/87 (40%), Gaps = 11/87 (12%)
Frame = +2

Query: 38 RSPTPI-----------VPAIFALAMDVPDYLPLQWNKAQDDKPLGPRFDMTAEEAISCQ 184
+SP+P+ VPA++ M +P LPL W Q P+ PR +S Q
Sbjct: 1169 KSPSPVQRLDPGASILYVPAVYGGNMVMPMPLPLPWAGYQSRFPMDPRI-------MSHQ 1221

Query: 185 LEALRNNDHPHADYGVEVMYKFAGFDP 265
N P A V+Y F+ P
Sbjct: 1222 AAMYNLNLRPAASRTSPVLYGFSHASP 1248


>sp|Q5UNW8|YL719_MIMIV Uncharacterized protein L719 OS=Acanthamoeba
polyphaga mimivirus GN=MIMI_L719 PE=4 SV=1
Length = 343

Score = 30.0 bits (66), Expect = 9.1
Identities = 14/58 (24%), Positives = 28/58 (48%)
Frame = +2

Query: 32 PPRSPTPIVPAIFALAMDVPDYLPLQWNKAQDDKPLGPRFDMTAEEAISCQLEALRNN 205
PP SP P P+I ++ +P+Y+ + LGP + + + +CQ + ++
Sbjct: 247 PPISPVPSTPSIKRISTMIPNYI--------HQEVLGPNRSLNVDSSNACQTACINDD 296


>sp|Q02403|T231E_BACTF Transposase for insertion sequence element
IS231E OS=Bacillus thuringiensis subsp. finitimus PE=3
SV=1
Length = 478

Score = 30.0 bits (66), Expect = 9.1
Identities = 13/26 (50%), Positives = 18/26 (69%)
Frame = -3

Query: 303 KSKKGPKYVERSKGSKPANLYITSTP 226
+SKKG Y E+SK N+Y+T+TP
Sbjct: 304 ESKKGITYSEKSKRLAGMNIYVTNTP 329


tr_hit_id Q6NM03
Definition tr|Q6NM03|Q6NM03_ARATH At2g25605 (Putative uncharacterized protein) OS=Arabidopsis thaliana
Align length 166
Score (bit) 257.0
E-value 3.0e-67
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK955202|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0022_H12, 5'
(593 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|Q6NM03|Q6NM03_ARATH At2g25605 (Putative uncharacterized prote... 257 3e-67
tr|A9T6I0|A9T6I0_PHYPA Predicted protein OS=Physcomitrella paten... 255 2e-66
tr|A7P5K4|A7P5K4_VITVI Chromosome chr4 scaffold_6, whole genome ... 253 6e-66
tr|B6THC8|B6THC8_MAIZE Putative uncharacterized protein OS=Zea m... 250 5e-65
tr|Q0DFR7|Q0DFR7_ORYSJ Os05g0574700 protein OS=Oryza sativa subs... 244 3e-63
tr|B8AWV6|B8AWV6_ORYSI Putative uncharacterized protein OS=Oryza... 244 3e-63
tr|A5BJE9|A5BJE9_VITVI Putative uncharacterized protein OS=Vitis... 234 2e-60
tr|A3B727|A3B727_ORYSJ Putative uncharacterized protein OS=Oryza... 153 6e-36
tr|A8JI05|A8JI05_CHLRE Predicted protein OS=Chlamydomonas reinha... 140 4e-32
tr|Q6F364|Q6F364_ORYSJ Putative uncharacterized protein OJ1268_B... 75 4e-12
tr|B7F3P2|B7F3P2_ORYSJ cDNA clone:002-182-C01, full insert seque... 75 4e-12
tr|A9REC5|A9REC5_PHYPA Predicted protein OS=Physcomitrella paten... 55 3e-06
tr|Q2S4B5|Q2S4B5_SALRD Putative uncharacterized protein OS=Salin... 54 9e-06
tr|A8IS56|A8IS56_CHLRE Predicted protein OS=Chlamydomonas reinha... 53 1e-05
tr|Q18HT6|Q18HT6_HALWD Putative uncharacterized protein OS=Haloq... 47 0.001
tr|Q5V6H8|Q5V6H8_HALMA Putative uncharacterized protein OS=Haloa... 45 0.003
tr|B3T172|B3T172_9ZZZZ Putative uncharacterized protein OS=uncul... 44 0.007
tr|A4S6G9|A4S6G9_OSTLU Predicted protein OS=Ostreococcus lucimar... 43 0.012
tr|Q4FL80|Q4FL80_PELUB Putative uncharacterized protein OS=Pelag... 37 0.85
tr|Q1UZY6|Q1UZY6_9RICK Putative uncharacterized protein OS=Candi... 37 0.85
tr|B8C086|B8C086_THAPS Predicted protein OS=Thalassiosira pseudo... 36 1.4
tr|Q2C602|Q2C602_9GAMM Putative transcriptional regulator OS=Pho... 36 1.9
tr|Q1ZRQ2|Q1ZRQ2_9VIBR Putative transcriptional regulator OS=Vib... 36 1.9
tr|B3T2F1|B3T2F1_9ZZZZ Putative uncharacterized protein OS=uncul... 35 3.2
tr|Q7N5Y6|Q7N5Y6_PHOLL Similar to unknown protein OS=Photorhabdu... 35 3.2
tr|A3LVJ8|A3LVJ8_PICST Set1C component SDC1 (Suppressor of CDC25... 35 3.2
tr|Q3L9Z7|Q3L9Z7_RHOE4 Hypothetical membrane protein OS=Rhodococ... 34 7.2
tr|B0CG91|B0CG91_ACAM1 Peptidase, M48 family, putative OS=Acaryo... 33 9.4

>tr|Q6NM03|Q6NM03_ARATH At2g25605 (Putative uncharacterized protein)
OS=Arabidopsis thaliana GN=At2g25605 PE=2 SV=1
Length = 200

Score = 257 bits (657), Expect = 3e-67
Identities = 114/166 (68%), Positives = 138/166 (83%)
Frame = +2

Query: 71 ALAMDVPDYLPLQWNKAQDDKPLGPRFDMTAEEAISCQLEALRNNDHPHADYGVEVMYKF 250
A + DVPD+L W +++ +P GPR D +AE+A+ QL+AL+ NDHP DYG+EVMY+F
Sbjct: 35 ASSSDVPDFLSADWLESRRKRPFGPRLDFSAEDAVRHQLDALKYNDHPRDDYGIEVMYRF 94

Query: 251 AGFDPFERSTYFGPFFDLGQFERFRRIFHHSTYRVLLGHKEAQTLSSLYVNEHCFKQRVW 430
AGFDPFERSTYFGPFFDLGQFERFRRIFHHS+YRVLLGHK+ + LSSL+V E+ FKQR+W
Sbjct: 95 AGFDPFERSTYFGPFFDLGQFERFRRIFHHSSYRVLLGHKDRKLLSSLFVEENRFKQRIW 154

Query: 431 VMGARPNEEEIFEFTLLQRVGGCWDGYWLTQSLRHDGDGISGGIAY 568
+ G RP EEEIFEFT+ QR+GG WDGYWLT+SL HDGD SGG+AY
Sbjct: 155 IQGNRPEEEEIFEFTMFQRIGGSWDGYWLTESLLHDGDVFSGGMAY 200


>tr|A9T6I0|A9T6I0_PHYPA Predicted protein OS=Physcomitrella patens
subsp. patens GN=PHYPADRAFT_219361 PE=4 SV=1
Length = 230

Score = 255 bits (651), Expect = 2e-66
Identities = 115/166 (69%), Positives = 141/166 (84%)
Frame = +2

Query: 71 ALAMDVPDYLPLQWNKAQDDKPLGPRFDMTAEEAISCQLEALRNNDHPHADYGVEVMYKF 250
A A +VPD+LP W K +KP+GP FD++AE+ QLEAL++ND P+AD+G+E+MY+F
Sbjct: 67 AAAAEVPDFLPTTWEKP--NKPIGPTFDLSAEQVTLLQLEALQDNDIPYADHGIEIMYRF 124

Query: 251 AGFDPFERSTYFGPFFDLGQFERFRRIFHHSTYRVLLGHKEAQTLSSLYVNEHCFKQRVW 430
AGFDPF+RS YFGP FDLGQFERFRRIFHH+++RVLL H + + LSSL+VNEHCFKQRV
Sbjct: 125 AGFDPFKRSEYFGPTFDLGQFERFRRIFHHTSFRVLLNHTDRRILSSLFVNEHCFKQRVC 184

Query: 431 VMGARPNEEEIFEFTLLQRVGGCWDGYWLTQSLRHDGDGISGGIAY 568
++GARP EEEI+EFTL QR+GG WDGYWLTQSLRHDG+G SGGIAY
Sbjct: 185 IVGARPGEEEIYEFTLAQRIGGNWDGYWLTQSLRHDGEGASGGIAY 230


>tr|A7P5K4|A7P5K4_VITVI Chromosome chr4 scaffold_6, whole genome
shotgun sequence OS=Vitis vinifera GN=GSVIVT00032568001
PE=4 SV=1
Length = 200

Score = 253 bits (646), Expect = 6e-66
Identities = 116/188 (61%), Positives = 144/188 (76%), Gaps = 3/188 (1%)
Frame = +2

Query: 14 IKMVSSPPRSPTPIVPAIFA---LAMDVPDYLPLQWNKAQDDKPLGPRFDMTAEEAISCQ 184
I + S P P+ ++ + + DVPD+L W +++ +P GPR + +AEEA+ Q
Sbjct: 13 ISLFSKPFHGDKPVSVSLSSRIRASADVPDFLSADWLESRRKRPFGPRLNFSAEEAVQYQ 72

Query: 185 LEALRNNDHPHADYGVEVMYKFAGFDPFERSTYFGPFFDLGQFERFRRIFHHSTYRVLLG 364
L+AL+ ND P DYG+EVMY+FAGFDPFERSTYFGPFFDLGQFERFRRIFHHS+YRVLL
Sbjct: 73 LDALKYNDQPRQDYGIEVMYRFAGFDPFERSTYFGPFFDLGQFERFRRIFHHSSYRVLLC 132

Query: 365 HKEAQTLSSLYVNEHCFKQRVWVMGARPNEEEIFEFTLLQRVGGCWDGYWLTQSLRHDGD 544
H+E + LSSL+V E+ FKQRVW+ G RP EEEIF+FT+ QRVGG WDGYWLT+SL HDGD
Sbjct: 133 HRERKILSSLWVKENRFKQRVWIRGTRPEEEEIFQFTMFQRVGGSWDGYWLTESLLHDGD 192

Query: 545 GISGGIAY 568
SGG+AY
Sbjct: 193 SFSGGVAY 200


>tr|B6THC8|B6THC8_MAIZE Putative uncharacterized protein OS=Zea mays
PE=2 SV=1
Length = 211

Score = 250 bits (638), Expect = 5e-65
Identities = 119/185 (64%), Positives = 142/185 (76%), Gaps = 8/185 (4%)
Frame = +2

Query: 38 RSPTPIVPAIFA--------LAMDVPDYLPLQWNKAQDDKPLGPRFDMTAEEAISCQLEA 193
R+ P +PA A + DVPD+L W + + KP GPR + +AEEA+ QLE+
Sbjct: 27 RTRRPAIPAAAARLKVSASAASSDVPDFLSSNWLETRKRKPFGPRLNFSAEEAVEYQLES 86

Query: 194 LRNNDHPHADYGVEVMYKFAGFDPFERSTYFGPFFDLGQFERFRRIFHHSTYRVLLGHKE 373
L+ ND P DYG+EVMY+FAGFDPFERSTYFG FDLGQFERFRR+FHHSTYRVLLGH+E
Sbjct: 87 LKYNDLPRPDYGIEVMYRFAGFDPFERSTYFGRQFDLGQFERFRRLFHHSTYRVLLGHRE 146

Query: 374 AQTLSSLYVNEHCFKQRVWVMGARPNEEEIFEFTLLQRVGGCWDGYWLTQSLRHDGDGIS 553
+ LSSL+V E+ FKQRVWV GARP EEEIF+FT++QRVGG WDGYWLT+SL +DGD S
Sbjct: 147 RRILSSLWVEENQFKQRVWVQGARPEEEEIFQFTMVQRVGGSWDGYWLTESLINDGDAFS 206

Query: 554 GGIAY 568
GGIAY
Sbjct: 207 GGIAY 211


>tr|Q0DFR7|Q0DFR7_ORYSJ Os05g0574700 protein OS=Oryza sativa subsp.
japonica GN=Os05g0574700 PE=2 SV=1
Length = 218

Score = 244 bits (623), Expect = 3e-63
Identities = 116/180 (64%), Positives = 136/180 (75%), Gaps = 1/180 (0%)
Frame = +2

Query: 32 PPRSPTPIVPAIFALAMDVPDYLPLQWNKAQDDKPLGPRFDMTAEEAISCQLEALRNNDH 211
PP + + A A DVPD+L W + + KP GPR + AEEA+ QLEAL+ ND
Sbjct: 39 PPAAAAASRFRVSASASDVPDFLSSDWLETRKKKPFGPRLNFNAEEAVEYQLEALKYNDQ 98

Query: 212 PHADYGVEVMYKFAGFDPFERSTYFGPFFDLGQFERFRRIFHHSTYRVLLGHKEAQTLSS 391
P DYG+EVMY+FAGFDPFERSTYFG FDLGQFERFRRIFHHSTYRVLL HKE LSS
Sbjct: 99 PRQDYGIEVMYRFAGFDPFERSTYFGRQFDLGQFERFRRIFHHSTYRVLLAHKERTILSS 158

Query: 392 LYVNEHCFKQRVWVMGARPNEEEIFEFTLLQRVGGCWDGYWLTQSL-RHDGDGISGGIAY 568
L+V E+ +KQRVWV G+RP EE IF+FT++QRVGG WDGYWLT+SL DGD +SGG+AY
Sbjct: 159 LWVEENLYKQRVWVRGSRPEEEAIFQFTMVQRVGGSWDGYWLTESLINDDGDALSGGLAY 218


>tr|B8AWV6|B8AWV6_ORYSI Putative uncharacterized protein OS=Oryza
sativa subsp. indica GN=OsI_21087 PE=4 SV=1
Length = 215

Score = 244 bits (623), Expect = 3e-63
Identities = 116/180 (64%), Positives = 136/180 (75%), Gaps = 1/180 (0%)
Frame = +2

Query: 32 PPRSPTPIVPAIFALAMDVPDYLPLQWNKAQDDKPLGPRFDMTAEEAISCQLEALRNNDH 211
PP + + A A DVPD+L W + + KP GPR + AEEA+ QLEAL+ ND
Sbjct: 36 PPAAAAASRFRVSASASDVPDFLSSDWLETRKKKPFGPRLNFNAEEAVEYQLEALKYNDQ 95

Query: 212 PHADYGVEVMYKFAGFDPFERSTYFGPFFDLGQFERFRRIFHHSTYRVLLGHKEAQTLSS 391
P DYG+EVMY+FAGFDPFERSTYFG FDLGQFERFRRIFHHSTYRVLL HKE LSS
Sbjct: 96 PRQDYGIEVMYRFAGFDPFERSTYFGRQFDLGQFERFRRIFHHSTYRVLLAHKERTILSS 155

Query: 392 LYVNEHCFKQRVWVMGARPNEEEIFEFTLLQRVGGCWDGYWLTQSL-RHDGDGISGGIAY 568
L+V E+ +KQRVWV G+RP EE IF+FT++QRVGG WDGYWLT+SL DGD +SGG+AY
Sbjct: 156 LWVEENLYKQRVWVRGSRPEEEAIFQFTMVQRVGGSWDGYWLTESLINDDGDALSGGLAY 215


>tr|A5BJE9|A5BJE9_VITVI Putative uncharacterized protein OS=Vitis
vinifera GN=VITISV_004444 PE=4 SV=1
Length = 166

Score = 234 bits (598), Expect = 2e-60
Identities = 108/162 (66%), Positives = 130/162 (80%)
Frame = +2

Query: 83 DVPDYLPLQWNKAQDDKPLGPRFDMTAEEAISCQLEALRNNDHPHADYGVEVMYKFAGFD 262
DVPD+L W +++ +P GPR + +AEEA+ QL+AL+ ND P DYG+EVMY+FAGFD
Sbjct: 7 DVPDFLSADWLESRRKRPFGPRLNFSAEEAVQYQLDALKYNDQPRQDYGIEVMYRFAGFD 66

Query: 263 PFERSTYFGPFFDLGQFERFRRIFHHSTYRVLLGHKEAQTLSSLYVNEHCFKQRVWVMGA 442
PFERSTYFGPFFDLGQFERFRRIFHHS+YRVLL H+E + LSSL+V E+ FKQRVW+ G
Sbjct: 67 PFERSTYFGPFFDLGQFERFRRIFHHSSYRVLLCHRERKILSSLWVKENRFKQRVWIRGT 126

Query: 443 RPNEEEIFEFTLLQRVGGCWDGYWLTQSLRHDGDGISGGIAY 568
RP EEEIF+FT+ V WDGYWLT+SL HDGD SGG+AY
Sbjct: 127 RPEEEEIFQFTIGLVVP--WDGYWLTESLLHDGDSFSGGVAY 166


>tr|A3B727|A3B727_ORYSJ Putative uncharacterized protein OS=Oryza
sativa subsp. japonica GN=OsJ_018849 PE=4 SV=1
Length = 269

Score = 153 bits (387), Expect = 6e-36
Identities = 82/163 (50%), Positives = 100/163 (61%), Gaps = 2/163 (1%)
Frame = +2

Query: 71 ALAMDVPDY-LPLQWNKAQDDKPLGPRFDMTAEEAISCQLEALRNNDHPHADYGVEVMYK 247
A+ MD P++ + L+ K KP GPR + AEEA+ QLEAL+ ND P DYG+EVMY+
Sbjct: 97 AVQMDYPEFRMRLETRKK---KPFGPRLNFNAEEAVEYQLEALKYNDQPRQDYGIEVMYR 153

Query: 248 FAGFDPFERSTYFGPFFDLGQFERFRRIFHHSTYRVLLGHKEAQTLSSLYVNEHCFKQRV 427
FAGFDPFERSTYFG FDLGQ + +KQRV
Sbjct: 154 FAGFDPFERSTYFGRQFDLGQ--------------------------------NLYKQRV 181

Query: 428 WVMGARPNEEEIFEFTLLQRVGGCWDGYWLTQSL-RHDGDGIS 553
WV G+RP EE IF+FT++QRVGG WDGYWLT+SL DGD +S
Sbjct: 182 WVRGSRPEEEAIFQFTMVQRVGGSWDGYWLTESLINDDGDALS 224


>tr|A8JI05|A8JI05_CHLRE Predicted protein OS=Chlamydomonas
reinhardtii GN=CHLREDRAFT_180553 PE=4 SV=1
Length = 169

Score = 140 bits (354), Expect = 4e-32
Identities = 66/139 (47%), Positives = 94/139 (67%)
Frame = +2

Query: 137 LGPRFDMTAEEAISCQLEALRNNDHPHADYGVEVMYKFAGFDPFERSTYFGPFFDLGQFE 316
+GP FD++ E+A+ QLEAL++N++P+ D+GVEVMY+FA FDPF+R+ YFG DLGQFE
Sbjct: 26 IGPCFDLSWEDALRVQLEALQHNNNPYPDHGVEVMYRFANFDPFQRTKYFGRSLDLGQFE 85

Query: 317 RFRRIFHHSTYRVLLGHKEAQTLSSLYVNEHCFKQRVWVMGARPNEEEIFEFTLLQRVGG 496
RFRR+ H + LL + + LS+L ++E C+ RV V EE + TL QR+GG
Sbjct: 86 RFRRVMHSPFHATLLDNSGWEVLSTLQLSETCWCARVRVWDTHRLEERAYAITLTQRLGG 145

Query: 497 CWDGYWLTQSLRHDGDGIS 553
C+DGYW T +G ++
Sbjct: 146 CYDGYWYTDRWVCEGQDVN 164


>tr|Q6F364|Q6F364_ORYSJ Putative uncharacterized protein
OJ1268_B08.10 OS=Oryza sativa subsp. japonica
GN=OJ1268_B08.10 PE=4 SV=1
Length = 110

Score = 74.7 bits (182), Expect = 4e-12
Identities = 35/75 (46%), Positives = 45/75 (60%)
Frame = +2

Query: 32 PPRSPTPIVPAIFALAMDVPDYLPLQWNKAQDDKPLGPRFDMTAEEAISCQLEALRNNDH 211
PP + + A A DVPD+L W + + KP GPR + AEEA+ QLEAL+ ND
Sbjct: 36 PPAAAAASRFRVSASASDVPDFLSSDWLETRKKKPFGPRLNFNAEEAVEYQLEALKYNDQ 95

Query: 212 PHADYGVEVMYKFAG 256
P DYG+EVMY+ G
Sbjct: 96 PRQDYGIEVMYRVIG 110