DK955202 |
Clone id |
TST39A01NGRL0022_H12 |
Library |
TST39 |
Length |
593 |
Definition |
Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0022_H12. 5' end sequence. |
Accession |
DK955202 |
Tissue type |
prothallia with plantlets |
Developmental stage |
gametophytes with sporophytes |
Contig ID |
CL954Contig1 |
Sequence |
GCAGCTCTCGTTTATTAAAATGGTGTCCTCCCCGCCTCGCTCTCCTACACCGATAGTCCC CGCCATTTTCGCCCTTGCTATGGATGTTCCGGACTATCTCCCGCTTCAATGGAATAAAGC ACAGGATGACAAACCATTAGGTCCTCGCTTCGACATGACAGCAGAAGAGGCAATTAGCTG TCAATTAGAAGCTTTACGCAACAATGATCATCCTCATGCAGATTATGGTGTGGAGGTTAT GTATAAGTTTGCTGGTTTTGACCCTTTTGAGCGCTCTACGTACTTTGGACCCTTCTTTGA TTTAGGACAGTTTGAAAGGTTTAGACGGATATTTCATCATTCCACCTATCGGGTACTCCT TGGTCATAAGGAAGCACAGACTCTGAGCAGCTTATATGTTAACGAGCATTGTTTCAAGCA AAGGGTGTGGGTTATGGGGGCACGTCCGAATGAAGAGGAGATTTTCGAGTTCACTCTGTT GCAAAGAGTTGGTGGCTGCTGGGATGGCTATTGGTTAACTCAAAGCCTTCGCCATGATGG TGATGGCATCAGTGGTGGTATAGCTTACTAGTTCGCTATTGAACTAGTTTTTG |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q6NYU2 |
Definition |
sp|Q6NYU2|HELZ_DANRE Probable helicase with zinc finger domain OS=Danio rerio |
Align length |
87 |
Score (bit) |
30.4 |
E-value |
7.0 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
Q6NM03 |
Definition |
tr|Q6NM03|Q6NM03_ARATH At2g25605 (Putative uncharacterized protein) OS=Arabidopsis thaliana |
Align length |
166 |
Score (bit) |
257.0 |
E-value |
3.0e-67 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK955202|Adiantum capillus-veneris mRNA, clone: TST39A01NGRL0022_H12, 5' (593 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|Q6NM03|Q6NM03_ARATH At2g25605 (Putative uncharacterized prote... 257 3e-67 tr|A9T6I0|A9T6I0_PHYPA Predicted protein OS=Physcomitrella paten... 255 2e-66 tr|A7P5K4|A7P5K4_VITVI Chromosome chr4 scaffold_6, whole genome ... 253 6e-66 tr|B6THC8|B6THC8_MAIZE Putative uncharacterized protein OS=Zea m... 250 5e-65 tr|Q0DFR7|Q0DFR7_ORYSJ Os05g0574700 protein OS=Oryza sativa subs... 244 3e-63 tr|B8AWV6|B8AWV6_ORYSI Putative uncharacterized protein OS=Oryza... 244 3e-63 tr|A5BJE9|A5BJE9_VITVI Putative uncharacterized protein OS=Vitis... 234 2e-60 tr|A3B727|A3B727_ORYSJ Putative uncharacterized protein OS=Oryza... 153 6e-36 tr|A8JI05|A8JI05_CHLRE Predicted protein OS=Chlamydomonas reinha... 140 4e-32 tr|Q6F364|Q6F364_ORYSJ Putative uncharacterized protein OJ1268_B... 75 4e-12 tr|B7F3P2|B7F3P2_ORYSJ cDNA clone:002-182-C01, full insert seque... 75 4e-12 tr|A9REC5|A9REC5_PHYPA Predicted protein OS=Physcomitrella paten... 55 3e-06 tr|Q2S4B5|Q2S4B5_SALRD Putative uncharacterized protein OS=Salin... 54 9e-06 tr|A8IS56|A8IS56_CHLRE Predicted protein OS=Chlamydomonas reinha... 53 1e-05 tr|Q18HT6|Q18HT6_HALWD Putative uncharacterized protein OS=Haloq... 47 0.001 tr|Q5V6H8|Q5V6H8_HALMA Putative uncharacterized protein OS=Haloa... 45 0.003 tr|B3T172|B3T172_9ZZZZ Putative uncharacterized protein OS=uncul... 44 0.007 tr|A4S6G9|A4S6G9_OSTLU Predicted protein OS=Ostreococcus lucimar... 43 0.012 tr|Q4FL80|Q4FL80_PELUB Putative uncharacterized protein OS=Pelag... 37 0.85 tr|Q1UZY6|Q1UZY6_9RICK Putative uncharacterized protein OS=Candi... 37 0.85 tr|B8C086|B8C086_THAPS Predicted protein OS=Thalassiosira pseudo... 36 1.4 tr|Q2C602|Q2C602_9GAMM Putative transcriptional regulator OS=Pho... 36 1.9 tr|Q1ZRQ2|Q1ZRQ2_9VIBR Putative transcriptional regulator OS=Vib... 36 1.9 tr|B3T2F1|B3T2F1_9ZZZZ Putative uncharacterized protein OS=uncul... 35 3.2 tr|Q7N5Y6|Q7N5Y6_PHOLL Similar to unknown protein OS=Photorhabdu... 35 3.2 tr|A3LVJ8|A3LVJ8_PICST Set1C component SDC1 (Suppressor of CDC25... 35 3.2 tr|Q3L9Z7|Q3L9Z7_RHOE4 Hypothetical membrane protein OS=Rhodococ... 34 7.2 tr|B0CG91|B0CG91_ACAM1 Peptidase, M48 family, putative OS=Acaryo... 33 9.4
>tr|Q6NM03|Q6NM03_ARATH At2g25605 (Putative uncharacterized protein) OS=Arabidopsis thaliana GN=At2g25605 PE=2 SV=1 Length = 200
Score = 257 bits (657), Expect = 3e-67 Identities = 114/166 (68%), Positives = 138/166 (83%) Frame = +2
Query: 71 ALAMDVPDYLPLQWNKAQDDKPLGPRFDMTAEEAISCQLEALRNNDHPHADYGVEVMYKF 250 A + DVPD+L W +++ +P GPR D +AE+A+ QL+AL+ NDHP DYG+EVMY+F Sbjct: 35 ASSSDVPDFLSADWLESRRKRPFGPRLDFSAEDAVRHQLDALKYNDHPRDDYGIEVMYRF 94
Query: 251 AGFDPFERSTYFGPFFDLGQFERFRRIFHHSTYRVLLGHKEAQTLSSLYVNEHCFKQRVW 430 AGFDPFERSTYFGPFFDLGQFERFRRIFHHS+YRVLLGHK+ + LSSL+V E+ FKQR+W Sbjct: 95 AGFDPFERSTYFGPFFDLGQFERFRRIFHHSSYRVLLGHKDRKLLSSLFVEENRFKQRIW 154
Query: 431 VMGARPNEEEIFEFTLLQRVGGCWDGYWLTQSLRHDGDGISGGIAY 568 + G RP EEEIFEFT+ QR+GG WDGYWLT+SL HDGD SGG+AY Sbjct: 155 IQGNRPEEEEIFEFTMFQRIGGSWDGYWLTESLLHDGDVFSGGMAY 200
>tr|A9T6I0|A9T6I0_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_219361 PE=4 SV=1 Length = 230
Score = 255 bits (651), Expect = 2e-66 Identities = 115/166 (69%), Positives = 141/166 (84%) Frame = +2
Query: 71 ALAMDVPDYLPLQWNKAQDDKPLGPRFDMTAEEAISCQLEALRNNDHPHADYGVEVMYKF 250 A A +VPD+LP W K +KP+GP FD++AE+ QLEAL++ND P+AD+G+E+MY+F Sbjct: 67 AAAAEVPDFLPTTWEKP--NKPIGPTFDLSAEQVTLLQLEALQDNDIPYADHGIEIMYRF 124
Query: 251 AGFDPFERSTYFGPFFDLGQFERFRRIFHHSTYRVLLGHKEAQTLSSLYVNEHCFKQRVW 430 AGFDPF+RS YFGP FDLGQFERFRRIFHH+++RVLL H + + LSSL+VNEHCFKQRV Sbjct: 125 AGFDPFKRSEYFGPTFDLGQFERFRRIFHHTSFRVLLNHTDRRILSSLFVNEHCFKQRVC 184
Query: 431 VMGARPNEEEIFEFTLLQRVGGCWDGYWLTQSLRHDGDGISGGIAY 568 ++GARP EEEI+EFTL QR+GG WDGYWLTQSLRHDG+G SGGIAY Sbjct: 185 IVGARPGEEEIYEFTLAQRIGGNWDGYWLTQSLRHDGEGASGGIAY 230
>tr|A7P5K4|A7P5K4_VITVI Chromosome chr4 scaffold_6, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00032568001 PE=4 SV=1 Length = 200
Score = 253 bits (646), Expect = 6e-66 Identities = 116/188 (61%), Positives = 144/188 (76%), Gaps = 3/188 (1%) Frame = +2
Query: 14 IKMVSSPPRSPTPIVPAIFA---LAMDVPDYLPLQWNKAQDDKPLGPRFDMTAEEAISCQ 184 I + S P P+ ++ + + DVPD+L W +++ +P GPR + +AEEA+ Q Sbjct: 13 ISLFSKPFHGDKPVSVSLSSRIRASADVPDFLSADWLESRRKRPFGPRLNFSAEEAVQYQ 72
Query: 185 LEALRNNDHPHADYGVEVMYKFAGFDPFERSTYFGPFFDLGQFERFRRIFHHSTYRVLLG 364 L+AL+ ND P DYG+EVMY+FAGFDPFERSTYFGPFFDLGQFERFRRIFHHS+YRVLL Sbjct: 73 LDALKYNDQPRQDYGIEVMYRFAGFDPFERSTYFGPFFDLGQFERFRRIFHHSSYRVLLC 132
Query: 365 HKEAQTLSSLYVNEHCFKQRVWVMGARPNEEEIFEFTLLQRVGGCWDGYWLTQSLRHDGD 544 H+E + LSSL+V E+ FKQRVW+ G RP EEEIF+FT+ QRVGG WDGYWLT+SL HDGD Sbjct: 133 HRERKILSSLWVKENRFKQRVWIRGTRPEEEEIFQFTMFQRVGGSWDGYWLTESLLHDGD 192
Query: 545 GISGGIAY 568 SGG+AY Sbjct: 193 SFSGGVAY 200
>tr|B6THC8|B6THC8_MAIZE Putative uncharacterized protein OS=Zea mays PE=2 SV=1 Length = 211
Score = 250 bits (638), Expect = 5e-65 Identities = 119/185 (64%), Positives = 142/185 (76%), Gaps = 8/185 (4%) Frame = +2
Query: 38 RSPTPIVPAIFA--------LAMDVPDYLPLQWNKAQDDKPLGPRFDMTAEEAISCQLEA 193 R+ P +PA A + DVPD+L W + + KP GPR + +AEEA+ QLE+ Sbjct: 27 RTRRPAIPAAAARLKVSASAASSDVPDFLSSNWLETRKRKPFGPRLNFSAEEAVEYQLES 86
Query: 194 LRNNDHPHADYGVEVMYKFAGFDPFERSTYFGPFFDLGQFERFRRIFHHSTYRVLLGHKE 373 L+ ND P DYG+EVMY+FAGFDPFERSTYFG FDLGQFERFRR+FHHSTYRVLLGH+E Sbjct: 87 LKYNDLPRPDYGIEVMYRFAGFDPFERSTYFGRQFDLGQFERFRRLFHHSTYRVLLGHRE 146
Query: 374 AQTLSSLYVNEHCFKQRVWVMGARPNEEEIFEFTLLQRVGGCWDGYWLTQSLRHDGDGIS 553 + LSSL+V E+ FKQRVWV GARP EEEIF+FT++QRVGG WDGYWLT+SL +DGD S Sbjct: 147 RRILSSLWVEENQFKQRVWVQGARPEEEEIFQFTMVQRVGGSWDGYWLTESLINDGDAFS 206
Query: 554 GGIAY 568 GGIAY Sbjct: 207 GGIAY 211
>tr|Q0DFR7|Q0DFR7_ORYSJ Os05g0574700 protein OS=Oryza sativa subsp. japonica GN=Os05g0574700 PE=2 SV=1 Length = 218
Score = 244 bits (623), Expect = 3e-63 Identities = 116/180 (64%), Positives = 136/180 (75%), Gaps = 1/180 (0%) Frame = +2
Query: 32 PPRSPTPIVPAIFALAMDVPDYLPLQWNKAQDDKPLGPRFDMTAEEAISCQLEALRNNDH 211 PP + + A A DVPD+L W + + KP GPR + AEEA+ QLEAL+ ND Sbjct: 39 PPAAAAASRFRVSASASDVPDFLSSDWLETRKKKPFGPRLNFNAEEAVEYQLEALKYNDQ 98
Query: 212 PHADYGVEVMYKFAGFDPFERSTYFGPFFDLGQFERFRRIFHHSTYRVLLGHKEAQTLSS 391 P DYG+EVMY+FAGFDPFERSTYFG FDLGQFERFRRIFHHSTYRVLL HKE LSS Sbjct: 99 PRQDYGIEVMYRFAGFDPFERSTYFGRQFDLGQFERFRRIFHHSTYRVLLAHKERTILSS 158
Query: 392 LYVNEHCFKQRVWVMGARPNEEEIFEFTLLQRVGGCWDGYWLTQSL-RHDGDGISGGIAY 568 L+V E+ +KQRVWV G+RP EE IF+FT++QRVGG WDGYWLT+SL DGD +SGG+AY Sbjct: 159 LWVEENLYKQRVWVRGSRPEEEAIFQFTMVQRVGGSWDGYWLTESLINDDGDALSGGLAY 218
>tr|B8AWV6|B8AWV6_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_21087 PE=4 SV=1 Length = 215
Score = 244 bits (623), Expect = 3e-63 Identities = 116/180 (64%), Positives = 136/180 (75%), Gaps = 1/180 (0%) Frame = +2
Query: 32 PPRSPTPIVPAIFALAMDVPDYLPLQWNKAQDDKPLGPRFDMTAEEAISCQLEALRNNDH 211 PP + + A A DVPD+L W + + KP GPR + AEEA+ QLEAL+ ND Sbjct: 36 PPAAAAASRFRVSASASDVPDFLSSDWLETRKKKPFGPRLNFNAEEAVEYQLEALKYNDQ 95
Query: 212 PHADYGVEVMYKFAGFDPFERSTYFGPFFDLGQFERFRRIFHHSTYRVLLGHKEAQTLSS 391 P DYG+EVMY+FAGFDPFERSTYFG FDLGQFERFRRIFHHSTYRVLL HKE LSS Sbjct: 96 PRQDYGIEVMYRFAGFDPFERSTYFGRQFDLGQFERFRRIFHHSTYRVLLAHKERTILSS 155
Query: 392 LYVNEHCFKQRVWVMGARPNEEEIFEFTLLQRVGGCWDGYWLTQSL-RHDGDGISGGIAY 568 L+V E+ +KQRVWV G+RP EE IF+FT++QRVGG WDGYWLT+SL DGD +SGG+AY Sbjct: 156 LWVEENLYKQRVWVRGSRPEEEAIFQFTMVQRVGGSWDGYWLTESLINDDGDALSGGLAY 215
>tr|A5BJE9|A5BJE9_VITVI Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_004444 PE=4 SV=1 Length = 166
Score = 234 bits (598), Expect = 2e-60 Identities = 108/162 (66%), Positives = 130/162 (80%) Frame = +2
Query: 83 DVPDYLPLQWNKAQDDKPLGPRFDMTAEEAISCQLEALRNNDHPHADYGVEVMYKFAGFD 262 DVPD+L W +++ +P GPR + +AEEA+ QL+AL+ ND P DYG+EVMY+FAGFD Sbjct: 7 DVPDFLSADWLESRRKRPFGPRLNFSAEEAVQYQLDALKYNDQPRQDYGIEVMYRFAGFD 66
Query: 263 PFERSTYFGPFFDLGQFERFRRIFHHSTYRVLLGHKEAQTLSSLYVNEHCFKQRVWVMGA 442 PFERSTYFGPFFDLGQFERFRRIFHHS+YRVLL H+E + LSSL+V E+ FKQRVW+ G Sbjct: 67 PFERSTYFGPFFDLGQFERFRRIFHHSSYRVLLCHRERKILSSLWVKENRFKQRVWIRGT 126
Query: 443 RPNEEEIFEFTLLQRVGGCWDGYWLTQSLRHDGDGISGGIAY 568 RP EEEIF+FT+ V WDGYWLT+SL HDGD SGG+AY Sbjct: 127 RPEEEEIFQFTIGLVVP--WDGYWLTESLLHDGDSFSGGVAY 166
>tr|A3B727|A3B727_ORYSJ Putative uncharacterized protein OS=Oryza sativa subsp. japonica GN=OsJ_018849 PE=4 SV=1 Length = 269
Score = 153 bits (387), Expect = 6e-36 Identities = 82/163 (50%), Positives = 100/163 (61%), Gaps = 2/163 (1%) Frame = +2
Query: 71 ALAMDVPDY-LPLQWNKAQDDKPLGPRFDMTAEEAISCQLEALRNNDHPHADYGVEVMYK 247 A+ MD P++ + L+ K KP GPR + AEEA+ QLEAL+ ND P DYG+EVMY+ Sbjct: 97 AVQMDYPEFRMRLETRKK---KPFGPRLNFNAEEAVEYQLEALKYNDQPRQDYGIEVMYR 153
Query: 248 FAGFDPFERSTYFGPFFDLGQFERFRRIFHHSTYRVLLGHKEAQTLSSLYVNEHCFKQRV 427 FAGFDPFERSTYFG FDLGQ + +KQRV Sbjct: 154 FAGFDPFERSTYFGRQFDLGQ--------------------------------NLYKQRV 181
Query: 428 WVMGARPNEEEIFEFTLLQRVGGCWDGYWLTQSL-RHDGDGIS 553 WV G+RP EE IF+FT++QRVGG WDGYWLT+SL DGD +S Sbjct: 182 WVRGSRPEEEAIFQFTMVQRVGGSWDGYWLTESLINDDGDALS 224
>tr|A8JI05|A8JI05_CHLRE Predicted protein OS=Chlamydomonas reinhardtii GN=CHLREDRAFT_180553 PE=4 SV=1 Length = 169
Score = 140 bits (354), Expect = 4e-32 Identities = 66/139 (47%), Positives = 94/139 (67%) Frame = +2
Query: 137 LGPRFDMTAEEAISCQLEALRNNDHPHADYGVEVMYKFAGFDPFERSTYFGPFFDLGQFE 316 +GP FD++ E+A+ QLEAL++N++P+ D+GVEVMY+FA FDPF+R+ YFG DLGQFE Sbjct: 26 IGPCFDLSWEDALRVQLEALQHNNNPYPDHGVEVMYRFANFDPFQRTKYFGRSLDLGQFE 85
Query: 317 RFRRIFHHSTYRVLLGHKEAQTLSSLYVNEHCFKQRVWVMGARPNEEEIFEFTLLQRVGG 496 RFRR+ H + LL + + LS+L ++E C+ RV V EE + TL QR+GG Sbjct: 86 RFRRVMHSPFHATLLDNSGWEVLSTLQLSETCWCARVRVWDTHRLEERAYAITLTQRLGG 145
Query: 497 CWDGYWLTQSLRHDGDGIS 553 C+DGYW T +G ++ Sbjct: 146 CYDGYWYTDRWVCEGQDVN 164
>tr|Q6F364|Q6F364_ORYSJ Putative uncharacterized protein OJ1268_B08.10 OS=Oryza sativa subsp. japonica GN=OJ1268_B08.10 PE=4 SV=1 Length = 110
Score = 74.7 bits (182), Expect = 4e-12 Identities = 35/75 (46%), Positives = 45/75 (60%) Frame = +2
Query: 32 PPRSPTPIVPAIFALAMDVPDYLPLQWNKAQDDKPLGPRFDMTAEEAISCQLEALRNNDH 211 PP + + A A DVPD+L W + + KP GPR + AEEA+ QLEAL+ ND Sbjct: 36 PPAAAAASRFRVSASASDVPDFLSSDWLETRKKKPFGPRLNFNAEEAVEYQLEALKYNDQ 95
Query: 212 PHADYGVEVMYKFAG 256 P DYG+EVMY+ G Sbjct: 96 PRQDYGIEVMYRVIG 110
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