| DK955203 |
| Clone id |
TST39A01NGRL0022_H13 |
| Library |
TST39 |
| Length |
539 |
| Definition |
Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0022_H13. 5' end sequence. |
| Accession |
DK955203 |
| Tissue type |
prothallia with plantlets |
| Developmental stage |
gametophytes with sporophytes |
| Contig ID |
- |
| Sequence |
CATTTGCGGACACGCGACGATGGGTATCTCTCGAGACTCCACTCACAAGAGGCGCGCCAC AGGAGGGAAGAAGAAGACATGGCGCAAGAAGAGAAAGTATGAGCTCGGACGCCAATCTGC AATGACAAAGTTGTCAAGCAACAAGACAATTCGAAAGATTCGAGTTCGTGGTGGAAACTC AAAGTTCAGGGCTCTTCGGTTGGATACTGGCAACTATTCATGGGGATCTGAGGCTATTAC CCGCAAAACGCGCATCTTGGATGTGGTTTACAATGCCTCTAACAATGAGCTGGTTCGCAC TCAAACTCTGGTGAAGTCTGCCATCGTTCAGGTTGATGCAGCTCCGTTTCGTCAGTGGTA TAGTTCACACTATGGTGTGGATTTGGGCAAGAAGAAGAGAGCTGCTGCTGTCAAGAAAGA GTCCGAGGAGGGGGAGACTCCTGCTGAAGGAGAGACGAAACAGAGCAACCATGTGATCCG AAAACTTAGTAAACGAGTGGAGACCAGAACTTTGGATCCTCATCTGGAGGACCAAATTG |
| ■■Homology search results ■■ |
- |
| Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
| sp_hit_id |
Q08069 |
| Definition |
sp|Q08069|RS8_MAIZE 40S ribosomal protein S8 OS=Zea mays |
| Align length |
174 |
| Score (bit) |
220.0 |
| E-value |
4.0e-57 |
| Report |
 |
| TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
| tr_hit_id |
A9TQV8 |
| Definition |
tr|A9TQV8|A9TQV8_PHYPA Ribosomal protein S8 OS=Physcomitrella patens subsp. patens |
| Align length |
172 |
| Score (bit) |
228.0 |
| E-value |
2.0e-58 |
| Report |
 BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK955203|Adiantum capillus-veneris mRNA, clone: TST39A01NGRL0022_H13, 5' (539 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|A9TQV8|A9TQV8_PHYPA Ribosomal protein S8 OS=Physcomitrella pa... 228 2e-58 tr|A9S3Y5|A9S3Y5_PHYPA Ribosomal protein S8 OS=Physcomitrella pa... 226 4e-58 tr|A9T469|A9T469_PHYPA Ribosomal protein S8 OS=Physcomitrella pa... 225 1e-57 tr|A9TGU7|A9TGU7_PHYPA Ribosomal protein S8 OS=Physcomitrella pa... 223 4e-57 tr|A9TG34|A9TG34_PHYPA Ribosomal protein S8 OS=Physcomitrella pa... 223 5e-57 tr|Q7XKS7|Q7XKS7_ORYSA Ribosomal protein S8 OS=Oryza sativa GN=O... 221 2e-56 tr|Q0JDZ7|Q0JDZ7_ORYSJ Ribosomal protein S8 OS=Oryza sativa subs... 221 2e-56 tr|A9P8H4|A9P8H4_POPTR Ribosomal protein S8 OS=Populus trichocar... 221 2e-56 tr|A2XS59|A2XS59_ORYSI Ribosomal protein S8 OS=Oryza sativa subs... 221 2e-56 tr|B4FE90|B4FE90_MAIZE 40S ribosomal protein S8 OS=Zea mays PE=2... 220 4e-56 tr|Q0E158|Q0E158_ORYSJ Ribosomal protein S8 OS=Oryza sativa subs... 219 5e-56 tr|B8AHZ6|B8AHZ6_ORYSI Putative uncharacterized protein OS=Oryza... 219 5e-56 tr|A9P8D2|A9P8D2_POPTR Ribosomal protein S8 OS=Populus trichocar... 219 5e-56 tr|A5AUZ0|A5AUZ0_VITVI Ribosomal protein S8 OS=Vitis vinifera GN... 219 5e-56 tr|B3TM36|B3TM36_ELAGV 40S ribosomal protein S8 OS=Elaeis guinee... 216 6e-55 tr|A9NMS2|A9NMS2_PICSI Ribosomal protein S8 OS=Picea sitchensis ... 214 3e-54 tr|A9NMR0|A9NMR0_PICSI Ribosomal protein S8 OS=Picea sitchensis ... 214 3e-54 tr|A9NNT7|A9NNT7_PICSI Ribosomal protein S8 OS=Picea sitchensis ... 213 4e-54 tr|A7P0G2|A7P0G2_VITVI Ribosomal protein S8 OS=Vitis vinifera GN... 212 9e-54 tr|B8LML6|B8LML6_PICSI Putative uncharacterized protein OS=Picea... 212 1e-53 tr|Q3HRZ6|Q3HRZ6_SOLTU Ribosomal protein S8 OS=Solanum tuberosum... 211 1e-53 tr|A3A6Z9|A3A6Z9_ORYSJ Ribosomal protein S8 OS=Oryza sativa subs... 211 1e-53 tr|A1YKE4|A1YKE4_BRASY Ribosomal protein S8 OS=Brachypodium sylv... 211 2e-53 tr|B4FGG1|B4FGG1_MAIZE Putative uncharacterized protein OS=Zea m... 211 3e-53 tr|Q2XPV9|Q2XPV9_SOLTU Ribosomal protein S8 OS=Solanum tuberosum... 207 4e-52 tr|B7FMW0|B7FMW0_MEDTR Putative uncharacterized protein OS=Medic... 206 5e-52 tr|Q0WSK1|Q0WSK1_ARATH Ribosomal protein S8 OS=Arabidopsis thali... 206 6e-52 tr|B6DMH1|B6DMH1_9LAMI Putative 40S ribosomal protein S8-like pr... 200 3e-50 tr|B7FGL5|B7FGL5_MEDTR Putative uncharacterized protein OS=Medic... 199 6e-50 tr|A8HVQ1|A8HVQ1_CHLRE Ribosomal protein S8 OS=Chlamydomonas rei... 191 3e-47
>tr|A9TQV8|A9TQV8_PHYPA Ribosomal protein S8 OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_110504 PE=3 SV=1 Length = 216
Score = 228 bits (580), Expect = 2e-58 Identities = 117/172 (68%), Positives = 131/172 (76%) Frame = +2
Query: 20 MGISRDSTHXXXXXXXXXXXXXXXXXYELGRQSAMTKLSSNKTIRKIRVRGGNSKFRALR 199 MGISRDSTH YELGRQ AMTKLSSNKT+R+IRVRGGNSKFRALR Sbjct: 1 MGISRDSTHKRRATGGKKKSWRKKRKYELGRQGAMTKLSSNKTVRRIRVRGGNSKFRALR 60
Query: 200 LDTGNYSWGSEAITRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFRQWYSSHYGV 379 LDTGN+SWGSEA+TRKTR+LDVVYNASNNELVRTQTLVK+AI+QVDAAPFR WYS HYGV Sbjct: 61 LDTGNFSWGSEAVTRKTRVLDVVYNASNNELVRTQTLVKNAIIQVDAAPFRTWYSQHYGV 120
Query: 380 DLGKKKRAAAVXXXXXXXXXXXXXXXXQSNHVIRKLSKRVETRTLDPHLEDQ 535 ++GKKK+AAA QS HV+RK++KRVE + LD HLEDQ Sbjct: 121 EIGKKKKAAA---KKDEEAEATEEQTKQSGHVLRKIAKRVEGQKLDSHLEDQ 169
>tr|A9S3Y5|A9S3Y5_PHYPA Ribosomal protein S8 OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_208398 PE=3 SV=1 Length = 216
Score = 226 bits (577), Expect = 4e-58 Identities = 118/172 (68%), Positives = 130/172 (75%) Frame = +2
Query: 20 MGISRDSTHXXXXXXXXXXXXXXXXXYELGRQSAMTKLSSNKTIRKIRVRGGNSKFRALR 199 MGISRDSTH YELGRQ AMTKLSSNKT+R+IRVRGGNSKFRALR Sbjct: 1 MGISRDSTHKRRATGGKKKSWRKKRKYELGRQGAMTKLSSNKTVRRIRVRGGNSKFRALR 60
Query: 200 LDTGNYSWGSEAITRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFRQWYSSHYGV 379 LDTGNYSWGSEA+TRKTR+LDVVYNASNNELVRTQTLVK+AIVQVDAAPFR WYS HYGV Sbjct: 61 LDTGNYSWGSEAVTRKTRVLDVVYNASNNELVRTQTLVKNAIVQVDAAPFRTWYSQHYGV 120
Query: 380 DLGKKKRAAAVXXXXXXXXXXXXXXXXQSNHVIRKLSKRVETRTLDPHLEDQ 535 ++GKKK++AA +SNHV +KL+KRVE LD HLEDQ Sbjct: 121 EIGKKKKSAA---KKDSEDAEATEEEKKSNHVQKKLAKRVEGHKLDSHLEDQ 169
>tr|A9T469|A9T469_PHYPA Ribosomal protein S8 OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_191463 PE=3 SV=1 Length = 216
Score = 225 bits (574), Expect = 1e-57 Identities = 116/172 (67%), Positives = 130/172 (75%) Frame = +2
Query: 20 MGISRDSTHXXXXXXXXXXXXXXXXXYELGRQSAMTKLSSNKTIRKIRVRGGNSKFRALR 199 MGISRDSTH YELGRQ AMTKLSSNKT+R+IRVRGGNSKFRALR Sbjct: 1 MGISRDSTHKRRATGGKKKSWRKKRKYELGRQGAMTKLSSNKTVRRIRVRGGNSKFRALR 60
Query: 200 LDTGNYSWGSEAITRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFRQWYSSHYGV 379 LDTGN+SWGSEA+TRKTRILDVVYNASNNELVRTQTLVK+AI+QVDAAPFR WYS HYGV Sbjct: 61 LDTGNFSWGSEAVTRKTRILDVVYNASNNELVRTQTLVKNAIIQVDAAPFRTWYSQHYGV 120
Query: 380 DLGKKKRAAAVXXXXXXXXXXXXXXXXQSNHVIRKLSKRVETRTLDPHLEDQ 535 ++GKKK+AA QS+HV+RK++KR E + LD HLEDQ Sbjct: 121 EIGKKKKAAV---KKEEVAETTEEEKKQSSHVLRKIAKRAEGQKLDAHLEDQ 169
>tr|A9TGU7|A9TGU7_PHYPA Ribosomal protein S8 OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_194964 PE=3 SV=1 Length = 216
Score = 223 bits (569), Expect = 4e-57 Identities = 114/172 (66%), Positives = 130/172 (75%) Frame = +2
Query: 20 MGISRDSTHXXXXXXXXXXXXXXXXXYELGRQSAMTKLSSNKTIRKIRVRGGNSKFRALR 199 MGISRDSTH YELGRQ AMTKLSSNKT+R+IRVRGGN KFRALR Sbjct: 1 MGISRDSTHKRRATGGKKKSWRKKRKYELGRQGAMTKLSSNKTVRRIRVRGGNFKFRALR 60
Query: 200 LDTGNYSWGSEAITRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFRQWYSSHYGV 379 LDTGN+SWGSEA+TRKTR+LDVVYNASNNELVRTQTLVK+AI+QVDAAPFR WYS HYGV Sbjct: 61 LDTGNFSWGSEAVTRKTRVLDVVYNASNNELVRTQTLVKNAIIQVDAAPFRTWYSQHYGV 120
Query: 380 DLGKKKRAAAVXXXXXXXXXXXXXXXXQSNHVIRKLSKRVETRTLDPHLEDQ 535 ++GKKK+ AA +S HV+RK++KRVE++ LD HLEDQ Sbjct: 121 EIGKKKKTAA---KKDAEEAEATEEEKKSKHVLRKIAKRVESQKLDAHLEDQ 169
>tr|A9TG34|A9TG34_PHYPA Ribosomal protein S8 OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_194737 PE=3 SV=1 Length = 216
Score = 223 bits (568), Expect = 5e-57 Identities = 116/172 (67%), Positives = 130/172 (75%) Frame = +2
Query: 20 MGISRDSTHXXXXXXXXXXXXXXXXXYELGRQSAMTKLSSNKTIRKIRVRGGNSKFRALR 199 MGISRDSTH YELGRQ AMTKLSSNKT+R+IRVRGGNSKFRALR Sbjct: 1 MGISRDSTHKRRATGGKKKSWRKKRKYELGRQGAMTKLSSNKTVRRIRVRGGNSKFRALR 60
Query: 200 LDTGNYSWGSEAITRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFRQWYSSHYGV 379 LDTGN+SWGSEA+TRKTR+LDVVYNASNNELVRTQTLVK+AI+QVDAAPFR WYS HYGV Sbjct: 61 LDTGNFSWGSEAVTRKTRVLDVVYNASNNELVRTQTLVKNAIIQVDAAPFRTWYSQHYGV 120
Query: 380 DLGKKKRAAAVXXXXXXXXXXXXXXXXQSNHVIRKLSKRVETRTLDPHLEDQ 535 ++GKKK+AAA +S HV RKL+KR+E + LD HLEDQ Sbjct: 121 EIGKKKKAAA---KKDTEDAETTEEEKKSAHVQRKLAKRLEGQKLDSHLEDQ 169
>tr|Q7XKS7|Q7XKS7_ORYSA Ribosomal protein S8 OS=Oryza sativa GN=OSJNBa0038P21.4 PE=3 SV=1 Length = 221
Score = 221 bits (562), Expect = 2e-56 Identities = 114/174 (65%), Positives = 129/174 (74%), Gaps = 2/174 (1%) Frame = +2
Query: 20 MGISRDSTHXXXXXXXXXXXXXXXXXYELGRQSAMTKLSSNKTIRKIRVRGGNSKFRALR 199 MGISRDS H YELGRQ A TKLSSNKT+R++RVRGGN K+RALR Sbjct: 1 MGISRDSMHKRRATGGKQKAWRKKRKYELGRQPANTKLSSNKTVRRVRVRGGNLKWRALR 60
Query: 200 LDTGNYSWGSEAITRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFRQWYSSHYGV 379 LDTGNYSWGSEA+TRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPF+QWY +HYGV Sbjct: 61 LDTGNYSWGSEAVTRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLTHYGV 120
Query: 380 DLGKKKRAAAV--XXXXXXXXXXXXXXXXQSNHVIRKLSKRVETRTLDPHLEDQ 535 D+G+KK+A A +SNHV+RKL KR +TRTLD H+E+Q Sbjct: 121 DIGRKKKAPAAKKDAAEGQEGEAATEEAKKSNHVVRKLEKRQQTRTLDSHIEEQ 174
>tr|Q0JDZ7|Q0JDZ7_ORYSJ Ribosomal protein S8 OS=Oryza sativa subsp. japonica GN=Os04g0349500 PE=2 SV=1 Length = 221
Score = 221 bits (562), Expect = 2e-56 Identities = 114/174 (65%), Positives = 129/174 (74%), Gaps = 2/174 (1%) Frame = +2
Query: 20 MGISRDSTHXXXXXXXXXXXXXXXXXYELGRQSAMTKLSSNKTIRKIRVRGGNSKFRALR 199 MGISRDS H YELGRQ A TKLSSNKT+R++RVRGGN K+RALR Sbjct: 1 MGISRDSMHKRRATGGKQKAWRKKRKYELGRQPANTKLSSNKTVRRVRVRGGNLKWRALR 60
Query: 200 LDTGNYSWGSEAITRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFRQWYSSHYGV 379 LDTGNYSWGSEA+TRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPF+QWY +HYGV Sbjct: 61 LDTGNYSWGSEAVTRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLTHYGV 120
Query: 380 DLGKKKRAAAV--XXXXXXXXXXXXXXXXQSNHVIRKLSKRVETRTLDPHLEDQ 535 D+G+KK+A A +SNHV+RKL KR +TRTLD H+E+Q Sbjct: 121 DIGRKKKAPAAKKDAAEGQEGEAATEEAKKSNHVVRKLEKRQQTRTLDSHIEEQ 174
>tr|A9P8H4|A9P8H4_POPTR Ribosomal protein S8 OS=Populus trichocarpa PE=2 SV=1 Length = 220
Score = 221 bits (562), Expect = 2e-56 Identities = 113/172 (65%), Positives = 125/172 (72%) Frame = +2
Query: 20 MGISRDSTHXXXXXXXXXXXXXXXXXYELGRQSAMTKLSSNKTIRKIRVRGGNSKFRALR 199 MGISRDS H YELGRQ A TKLSSNKT+R+IRVRGGN K+RALR Sbjct: 1 MGISRDSMHKRRATGGKKKAWRKKRKYELGRQPASTKLSSNKTVRRIRVRGGNVKWRALR 60
Query: 200 LDTGNYSWGSEAITRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFRQWYSSHYGV 379 LDTGNYSWGSEA+TRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPF+QWY HYGV Sbjct: 61 LDTGNYSWGSEAVTRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGV 120
Query: 380 DLGKKKRAAAVXXXXXXXXXXXXXXXXQSNHVIRKLSKRVETRTLDPHLEDQ 535 D+G+KK+ A +S HV RKL KR +TR LDPH+E+Q Sbjct: 121 DIGRKKKTAPAAKKEGEDGEAAVEEEKKSKHVQRKLEKRQQTRKLDPHIEEQ 172
>tr|A2XS59|A2XS59_ORYSI Ribosomal protein S8 OS=Oryza sativa subsp. indica GN=OsI_15456 PE=3 SV=1 Length = 221
Score = 221 bits (562), Expect = 2e-56 Identities = 114/174 (65%), Positives = 129/174 (74%), Gaps = 2/174 (1%) Frame = +2
Query: 20 MGISRDSTHXXXXXXXXXXXXXXXXXYELGRQSAMTKLSSNKTIRKIRVRGGNSKFRALR 199 MGISRDS H YELGRQ A TKLSSNKT+R++RVRGGN K+RALR Sbjct: 1 MGISRDSMHKRRATGGKQKAWRKKRKYELGRQPANTKLSSNKTVRRVRVRGGNLKWRALR 60
Query: 200 LDTGNYSWGSEAITRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFRQWYSSHYGV 379 LDTGNYSWGSEA+TRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPF+QWY +HYGV Sbjct: 61 LDTGNYSWGSEAVTRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLTHYGV 120
Query: 380 DLGKKKRAAAV--XXXXXXXXXXXXXXXXQSNHVIRKLSKRVETRTLDPHLEDQ 535 D+G+KK+A A +SNHV+RKL KR +TRTLD H+E+Q Sbjct: 121 DIGRKKKAPAAKKDAAEGQEGEAATEEAKKSNHVVRKLEKRQQTRTLDAHIEEQ 174
>tr|B4FE90|B4FE90_MAIZE 40S ribosomal protein S8 OS=Zea mays PE=2 SV=1 Length = 221
Score = 220 bits (560), Expect = 4e-56 Identities = 115/174 (66%), Positives = 128/174 (73%), Gaps = 2/174 (1%) Frame = +2
Query: 20 MGISRDSTHXXXXXXXXXXXXXXXXXYELGRQSAMTKLSSNKTIRKIRVRGGNSKFRALR 199 MGISRDS H YELGRQ A TKLSSNKT+R++RVRGGN K+RALR Sbjct: 1 MGISRDSMHKRRATGGKQKAWRKKRKYELGRQPANTKLSSNKTVRRVRVRGGNVKWRALR 60
Query: 200 LDTGNYSWGSEAITRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFRQWYSSHYGV 379 LDTGNYSWGSEA+TRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPF+QWY +HYGV Sbjct: 61 LDTGNYSWGSEAVTRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLTHYGV 120
Query: 380 DLGKKKR--AAAVXXXXXXXXXXXXXXXXQSNHVIRKLSKRVETRTLDPHLEDQ 535 D+G+KK+ AA +SNHV RKL KR E RTLDPH+E+Q Sbjct: 121 DIGRKKKTPAAKKDNAEGQEVEAAAEETKKSNHVTRKLEKRKEGRTLDPHIEEQ 174
|