BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK955207|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0022_H17, 5'
         (460 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|A1JMD2|LFTR_YERE8 Leucyl/phenylalanyl-tRNA--protein transfera...    31   2.9  
sp|Q6MDE3|TRUA2_PARUW tRNA pseudouridine synthase A 2 OS=Protoch...    30   3.8  
sp|Q5SRE5|NU188_HUMAN Nucleoporin NUP188 homolog OS=Homo sapiens...    30   5.0  

>sp|A1JMD2|LFTR_YERE8 Leucyl/phenylalanyl-tRNA--protein transferase
           OS=Yersinia enterocolitica serotype O:8 / biotype 1B
           (strain 8081) GN=aat PE=3 SV=1
          Length = 236

 Score = 30.8 bits (68), Expect = 2.9
 Identities = 14/36 (38%), Positives = 23/36 (63%)
 Frame = +2

Query: 152 YCNLMSLKARHELELPLYIILVNAIHTLSIMNLFCG 259
           YC+L +L   H +E+ L   LV  ++ +S+ +LFCG
Sbjct: 120 YCHLHTLGHAHSVEVWLENELVGGLYGISVGSLFCG 155


>sp|Q6MDE3|TRUA2_PARUW tRNA pseudouridine synthase A 2
           OS=Protochlamydia amoebophila (strain UWE25) GN=truA2
           PE=3 SV=1
          Length = 262

 Score = 30.4 bits (67), Expect = 3.8
 Identities = 13/30 (43%), Positives = 16/30 (53%)
 Frame = -1

Query: 370 LPQTLSVTLNCV*KVEQYFFLYSFFNLPRW 281
           +P T   TLNCV K   Y+  Y F  LP +
Sbjct: 110 MPSTFHPTLNCVAKEYCYYICYDFVQLPEY 139


>sp|Q5SRE5|NU188_HUMAN Nucleoporin NUP188 homolog OS=Homo sapiens
           GN=NUP188 PE=1 SV=1
          Length = 1749

 Score = 30.0 bits (66), Expect = 5.0
 Identities = 12/49 (24%), Positives = 25/49 (51%)
 Frame = -2

Query: 429 EHMAQTWIYKFARFFHELANCLKHCLLH*IVFRK*NNIFFYIHFLICLD 283
           E  +Q  I K A +++E   C+  C+LH + + +     + + +  C+D
Sbjct: 115 ERQSQALILKIADYYYEERTCILRCVLHLLTYFQDERHPYRVEYADCVD 163

BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK955207|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0022_H17, 5'
         (460 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done

 ***** No hits found ******