| DK955210 |
| Clone id |
TST39A01NGRL0022_H20 |
| Library |
TST39 |
| Length |
533 |
| Definition |
Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0022_H20. 5' end sequence. |
| Accession |
DK955210 |
| Tissue type |
prothallia with plantlets |
| Developmental stage |
gametophytes with sporophytes |
| Contig ID |
CL1083Contig1 |
| Sequence |
GGCACAAAAAAAAATTTGTTTGGTAATAAGGGAGAGAAGCTTTCTCCCTCCACTCTCTCC CCCCTCTCGCAGCAAGTCATGGCGTACAGATCTGATGATGACTACCATTACCTGTTCAAG GTGGTGCTGATAGGCGATTCGGGCGTTGGCGAGTCCAACTTGCTATCCAGATTCACTCGC AACGAGTTCAGTCTCGAGTCCAAGTCCACCATTGGGGTAGAGTTTGCTACACACATCATC AACGTCGATGGCAAGACGATCAAGGCACACATCTGGGACACTGCCGGCCAAGAAAGGTAC AGAGCCATTACCAGTGCGTACTACCGAGGTGCAGTGGGTGCATTGTTGGTATATGATATA ACAAGACATGTGACATTTGAGAACGTTGAGCGGTGGTTGAAGGATCTGAAGGATCACACG GATTCGAATATCGTGGTTATGCTGGTGGGCAACAAGTCCGATCTACGTCATCTAATATCA GTATCAGCGGACGACAGCCAGGCTTTTGCAGAGAGAGAGGGTCTGTACTTCAT |
| ■■Homology search results ■■ |
- |
| Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
| sp_hit_id |
P40393 |
| Definition |
sp|P40393|RIC2_ORYSJ Ras-related protein RIC2 OS=Oryza sativa subsp. japonica |
| Align length |
149 |
| Score (bit) |
259.0 |
| E-value |
4.0e-69 |
| Report |
 |
| TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
| tr_hit_id |
A9NV29 |
| Definition |
tr|A9NV29|A9NV29_PICSI Putative uncharacterized protein OS=Picea sitchensis |
| Align length |
151 |
| Score (bit) |
268.0 |
| E-value |
1.0e-70 |
| Report |
 BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK955210|Adiantum capillus-veneris mRNA, clone: TST39A01NGRL0022_H20, 5' (533 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|A9NV29|A9NV29_PICSI Putative uncharacterized protein OS=Picea... 268 1e-70 tr|A9NZD1|A9NZD1_PICSI Putative uncharacterized protein OS=Picea... 261 1e-68 tr|A7QDG9|A7QDG9_VITVI Chromosome chr10 scaffold_81, whole genom... 261 2e-68 tr|Q6DXU0|Q6DXU0_GOSHI Putative GTP-binding protein OS=Gossypium... 260 3e-68 tr|Q6DXS7|Q6DXS7_GOSHI Putative GTP-binding protein OS=Gossypium... 260 3e-68 tr|B2ZAR1|B2ZAR1_GOSRA Putative GTP-binding protein OS=Gossypium... 260 3e-68 tr|Q0DBM2|Q0DBM2_ORYSJ Os06g0551400 protein OS=Oryza sativa subs... 259 5e-68 tr|B6TJP1|B6TJP1_MAIZE Ras-related protein RIC2 OS=Zea mays PE=2... 259 5e-68 tr|B4FIB2|B4FIB2_MAIZE Putative uncharacterized protein OS=Zea m... 259 5e-68 tr|A9T2Z0|A9T2Z0_PHYPA Rab11/RabA-family small GTPase OS=Physcom... 259 5e-68 tr|A2YDY6|A2YDY6_ORYSI Putative uncharacterized protein OS=Oryza... 259 5e-68 tr|B2ZAS4|B2ZAS4_9ROSI Putative GTP-binding protein OS=Gossypioi... 259 6e-68 tr|A9TDJ8|A9TDJ8_PHYPA Rab11/RabA-family small GTPase OS=Physcom... 259 8e-68 tr|A9SJB2|A9SJB2_PHYPA Predicted protein OS=Physcomitrella paten... 259 8e-68 tr|A9PCP6|A9PCP6_POPTR Putative uncharacterized protein OS=Popul... 259 8e-68 tr|A5ART2|A5ART2_VITVI Putative uncharacterized protein OS=Vitis... 259 8e-68 tr|Q68HC1|Q68HC1_WHEAT Rab GTP-binding protein OS=Triticum aesti... 258 1e-67 tr|A7P1V6|A7P1V6_VITVI Chromosome chr19 scaffold_4, whole genome... 258 1e-67 tr|Q6AUF8|Q6AUF8_ORYSJ Os05g0564400 protein OS=Oryza sativa subs... 258 2e-67 tr|A9RQ44|A9RQ44_PHYPA Rab11/RabA-family small GTPase OS=Physcom... 258 2e-67 tr|A7QPP6|A7QPP6_VITVI Chromosome chr10 scaffold_138, whole geno... 258 2e-67 tr|Q0J2L0|Q0J2L0_ORYSJ Os09g0327100 protein (Fragment) OS=Oryza ... 257 3e-67 tr|A9RSL8|A9RSL8_PHYPA Rab11/RabA-family small GTPase OS=Physcom... 257 3e-67 tr|A5BUD1|A5BUD1_VITVI Putative uncharacterized protein (Chromos... 257 3e-67 tr|Q7DLK8|Q7DLK8_VICFA Guanine nucleotide regulatory protein OS=... 256 5e-67 tr|Q6K2P6|Q6K2P6_ORYSJ cDNA clone:J023092H24, full insert sequen... 256 5e-67 tr|Q08150|Q08150_PEA GTP-binding protein OS=Pisum sativum PE=2 SV=1 256 5e-67 tr|Q08149|Q08149_PEA GTP-binding protein OS=Pisum sativum PE=2 SV=1 256 5e-67 tr|A2YZX0|A2YZX0_ORYSI Putative uncharacterized protein OS=Oryza... 256 5e-67 tr|B4FQ28|B4FQ28_MAIZE Putative uncharacterized protein OS=Zea m... 256 7e-67
>tr|A9NV29|A9NV29_PICSI Putative uncharacterized protein OS=Picea sitchensis PE=2 SV=1 Length = 216
Score = 268 bits (686), Expect = 1e-70 Identities = 133/151 (88%), Positives = 141/151 (93%) Frame = +1
Query: 79 MAYRSDDDYHYLFKVVLIGDSGVGESNLLSRFTRNEFSLESKSTIGVEFATHIINVDGKT 258 MAY+ DDDY YLFKVVLIGDSGVG+SNLLSRFTRNEFSLESKSTIGVEFAT INVDGK Sbjct: 1 MAYKVDDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSINVDGKM 60
Query: 259 IKAHIWDTAGQERYRAITSAYYRGAVGALLVYDITRHVTFENVERWLKDLKDHTDSNIVV 438 IKA IWDTAGQERYRAITSAYYRGAVGALLVYDITRHVTFENVERWLK+L+DHT+ NIVV Sbjct: 61 IKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITRHVTFENVERWLKELRDHTEHNIVV 120
Query: 439 MLVGNKSDLRHLISVSADDSQAFAEREGLYF 531 MLVGNKSDLRHL +VS +D+Q FAEREGLYF Sbjct: 121 MLVGNKSDLRHLRAVSTEDAQTFAEREGLYF 151
>tr|A9NZD1|A9NZD1_PICSI Putative uncharacterized protein OS=Picea sitchensis PE=2 SV=1 Length = 217
Score = 261 bits (668), Expect = 1e-68 Identities = 128/151 (84%), Positives = 139/151 (92%) Frame = +1
Query: 79 MAYRSDDDYHYLFKVVLIGDSGVGESNLLSRFTRNEFSLESKSTIGVEFATHIINVDGKT 258 MAYR+DDDY YLFKVVLIGDSGVG+SNLLSRFTRNEFSLESKSTIGVEFAT I VD K Sbjct: 1 MAYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSITVDDKV 60
Query: 259 IKAHIWDTAGQERYRAITSAYYRGAVGALLVYDITRHVTFENVERWLKDLKDHTDSNIVV 438 IKA IWDTAGQERYRAITSAYYRGAVGALLVYD+TRHVTFENVERWLK+L+DHTD+NIV+ Sbjct: 61 IKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDANIVI 120
Query: 439 MLVGNKSDLRHLISVSADDSQAFAEREGLYF 531 MLVGNK+DLRHL +VS +D +AFAERE YF Sbjct: 121 MLVGNKADLRHLRAVSIEDGKAFAERENTYF 151
>tr|A7QDG9|A7QDG9_VITVI Chromosome chr10 scaffold_81, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00035834001 PE=3 SV=1 Length = 218
Score = 261 bits (667), Expect = 2e-68 Identities = 125/149 (83%), Positives = 139/149 (93%) Frame = +1
Query: 85 YRSDDDYHYLFKVVLIGDSGVGESNLLSRFTRNEFSLESKSTIGVEFATHIINVDGKTIK 264 YR++DDY YLFKVVLIGDSGVG+SNLLSRFTRNEFSLESKSTIGVEFAT +NVDGK IK Sbjct: 4 YRAEDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSLNVDGKVIK 63
Query: 265 AHIWDTAGQERYRAITSAYYRGAVGALLVYDITRHVTFENVERWLKDLKDHTDSNIVVML 444 A IWDTAGQERYRAITSAYYRGAVGALLVYD+TRH TFENVERWL++L+DHTD NIVVML Sbjct: 64 AQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHSTFENVERWLRELRDHTDPNIVVML 123
Query: 445 VGNKSDLRHLISVSADDSQAFAEREGLYF 531 +GNKSDLRHL++VS +D ++FAERE LYF Sbjct: 124 IGNKSDLRHLVAVSTEDGKSFAERESLYF 152
>tr|Q6DXU0|Q6DXU0_GOSHI Putative GTP-binding protein OS=Gossypium hirsutum PE=3 SV=1 Length = 218
Score = 260 bits (665), Expect = 3e-68 Identities = 125/149 (83%), Positives = 139/149 (93%) Frame = +1
Query: 85 YRSDDDYHYLFKVVLIGDSGVGESNLLSRFTRNEFSLESKSTIGVEFATHIINVDGKTIK 264 YR++DDY YLFKVVLIGDSGVG+SNLLSRFTRNEFSLESKSTIGVEFAT +NVDGK IK Sbjct: 4 YRAEDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSLNVDGKVIK 63
Query: 265 AHIWDTAGQERYRAITSAYYRGAVGALLVYDITRHVTFENVERWLKDLKDHTDSNIVVML 444 A IWDTAGQERYRAITSAYYRGAVGALLVYD+TRH TFENVERWL++L+DHTD NIVVML Sbjct: 64 AQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHSTFENVERWLRELRDHTDPNIVVML 123
Query: 445 VGNKSDLRHLISVSADDSQAFAEREGLYF 531 VGNKSDLRHL++VS +D ++FAE+E LYF Sbjct: 124 VGNKSDLRHLVAVSTEDGKSFAEKESLYF 152
>tr|Q6DXS7|Q6DXS7_GOSHI Putative GTP-binding protein OS=Gossypium hirsutum PE=3 SV=1 Length = 218
Score = 260 bits (665), Expect = 3e-68 Identities = 125/149 (83%), Positives = 139/149 (93%) Frame = +1
Query: 85 YRSDDDYHYLFKVVLIGDSGVGESNLLSRFTRNEFSLESKSTIGVEFATHIINVDGKTIK 264 YR++DDY YLFKVVLIGDSGVG+SNLLSRFTRNEFSLESKSTIGVEFAT +NVDGK IK Sbjct: 4 YRAEDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSLNVDGKVIK 63
Query: 265 AHIWDTAGQERYRAITSAYYRGAVGALLVYDITRHVTFENVERWLKDLKDHTDSNIVVML 444 A IWDTAGQERYRAITSAYYRGAVGALLVYD+TRH TFENVERWL++L+DHTD NIVVML Sbjct: 64 AQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHSTFENVERWLRELRDHTDPNIVVML 123
Query: 445 VGNKSDLRHLISVSADDSQAFAEREGLYF 531 VGNKSDLRHL++VS +D ++FAE+E LYF Sbjct: 124 VGNKSDLRHLVAVSTEDGKSFAEKESLYF 152
>tr|B2ZAR1|B2ZAR1_GOSRA Putative GTP-binding protein OS=Gossypium raimondii PE=4 SV=1 Length = 218
Score = 260 bits (665), Expect = 3e-68 Identities = 125/149 (83%), Positives = 139/149 (93%) Frame = +1
Query: 85 YRSDDDYHYLFKVVLIGDSGVGESNLLSRFTRNEFSLESKSTIGVEFATHIINVDGKTIK 264 YR++DDY YLFKVVLIGDSGVG+SNLLSRFTRNEFSLESKSTIGVEFAT +NVDGK IK Sbjct: 4 YRAEDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSLNVDGKVIK 63
Query: 265 AHIWDTAGQERYRAITSAYYRGAVGALLVYDITRHVTFENVERWLKDLKDHTDSNIVVML 444 A IWDTAGQERYRAITSAYYRGAVGALLVYD+TRH TFENVERWL++L+DHTD NIVVML Sbjct: 64 AQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHSTFENVERWLRELRDHTDPNIVVML 123
Query: 445 VGNKSDLRHLISVSADDSQAFAEREGLYF 531 VGNKSDLRHL++VS +D ++FAE+E LYF Sbjct: 124 VGNKSDLRHLVAVSTEDGKSFAEKESLYF 152
>tr|Q0DBM2|Q0DBM2_ORYSJ Os06g0551400 protein OS=Oryza sativa subsp. japonica GN=Os06g0551400 PE=2 SV=1 Length = 217
Score = 259 bits (663), Expect = 5e-68 Identities = 125/149 (83%), Positives = 137/149 (91%) Frame = +1
Query: 85 YRSDDDYHYLFKVVLIGDSGVGESNLLSRFTRNEFSLESKSTIGVEFATHIINVDGKTIK 264 YR++DDY YLFKVVLIGDSGVG+SNLLSRFTRNEFSLESKSTIGVEFAT + VDGK +K Sbjct: 5 YRAEDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSLQVDGKVVK 64
Query: 265 AHIWDTAGQERYRAITSAYYRGAVGALLVYDITRHVTFENVERWLKDLKDHTDSNIVVML 444 A IWDTAGQERYRAITSAYYRGAVGALLVYD+TRH TFENVERWLK+L+DHTD NIVVML Sbjct: 65 AQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHSTFENVERWLKELRDHTDPNIVVML 124
Query: 445 VGNKSDLRHLISVSADDSQAFAEREGLYF 531 VGNKSDLRHL++V D+ +AFAERE LYF Sbjct: 125 VGNKSDLRHLVAVQTDEGKAFAERESLYF 153
>tr|B6TJP1|B6TJP1_MAIZE Ras-related protein RIC2 OS=Zea mays PE=2 SV=1 Length = 217
Score = 259 bits (663), Expect = 5e-68 Identities = 125/149 (83%), Positives = 137/149 (91%) Frame = +1
Query: 85 YRSDDDYHYLFKVVLIGDSGVGESNLLSRFTRNEFSLESKSTIGVEFATHIINVDGKTIK 264 YR++DDY YLFKVVLIGDSGVG+SNLLSRFTRNEFSLESKSTIGVEFAT + VDGK +K Sbjct: 5 YRAEDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSLQVDGKVVK 64
Query: 265 AHIWDTAGQERYRAITSAYYRGAVGALLVYDITRHVTFENVERWLKDLKDHTDSNIVVML 444 A IWDTAGQERYRAITSAYYRGAVGALLVYD+TRH TFENVERWLK+L+DHTD NIVVML Sbjct: 65 AQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHSTFENVERWLKELRDHTDPNIVVML 124
Query: 445 VGNKSDLRHLISVSADDSQAFAEREGLYF 531 VGNKSDLRHL++V D+ +AFAERE LYF Sbjct: 125 VGNKSDLRHLVAVQTDEGKAFAERESLYF 153
>tr|B4FIB2|B4FIB2_MAIZE Putative uncharacterized protein OS=Zea mays PE=2 SV=1 Length = 217
Score = 259 bits (663), Expect = 5e-68 Identities = 125/149 (83%), Positives = 137/149 (91%) Frame = +1
Query: 85 YRSDDDYHYLFKVVLIGDSGVGESNLLSRFTRNEFSLESKSTIGVEFATHIINVDGKTIK 264 YR++DDY YLFKVVLIGDSGVG+SNLLSRFTRNEFSLESKSTIGVEFAT + VDGK +K Sbjct: 5 YRAEDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSLQVDGKVVK 64
Query: 265 AHIWDTAGQERYRAITSAYYRGAVGALLVYDITRHVTFENVERWLKDLKDHTDSNIVVML 444 A IWDTAGQERYRAITSAYYRGAVGALLVYD+TRH TFENVERWLK+L+DHTD NIVVML Sbjct: 65 AQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHSTFENVERWLKELRDHTDPNIVVML 124
Query: 445 VGNKSDLRHLISVSADDSQAFAEREGLYF 531 VGNKSDLRHL++V D+ +AFAERE LYF Sbjct: 125 VGNKSDLRHLVAVQTDEGKAFAERESLYF 153
>tr|A9T2Z0|A9T2Z0_PHYPA Rab11/RabA-family small GTPase OS=Physcomitrella patens subsp. patens GN=RabA24 PE=3 SV=1 Length = 216
Score = 259 bits (663), Expect = 5e-68 Identities = 127/151 (84%), Positives = 140/151 (92%) Frame = +1
Query: 79 MAYRSDDDYHYLFKVVLIGDSGVGESNLLSRFTRNEFSLESKSTIGVEFATHIINVDGKT 258 MA+++DD+Y YLFKVVLIGDSGVG+SNLLSRFTRNEF LESKSTIGVEFAT I VDGKT Sbjct: 1 MAHKADDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRSIQVDGKT 60
Query: 259 IKAHIWDTAGQERYRAITSAYYRGAVGALLVYDITRHVTFENVERWLKDLKDHTDSNIVV 438 IKA IWDTAGQERYRAITSAYYRGAVGALLVYDIT+HVT+ENVERWLK+L+DH DSNIV+ Sbjct: 61 IKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKHVTYENVERWLKELRDHADSNIVI 120
Query: 439 MLVGNKSDLRHLISVSADDSQAFAEREGLYF 531 MLVGNKSDLRHL VS DD+Q+FAE+EGL F Sbjct: 121 MLVGNKSDLRHLRGVSLDDAQSFAEKEGLSF 151
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