DK955216 [AcEST]

DK955216
Clone id	TST39A01NGRL0022_I02
Library	TST39
Length	565
Definition	Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0022_I02. 5' end sequence.
Accession	DK955216
Tissue type	prothallia with plantlets
Developmental stage	gametophytes with sporophytes
Contig ID	CL984Contig1
Sequence	GTTGGACAGGGTGCGGCCCCGCCTTAAGTAACTTGCAAGCGTTATGCACTGCCCGCTTCC CCAGCATAGCATTGGTGTGTGGCAACAGGTTGCGAACCAATATTCAAGGCAATGAATACT CTCCGGTGCAACATTTCTCAATCAAGGGCAATACTCATCTGCACAGGTCCGCTATTTTAT GATTTTGCTGACTATTTTACAGAATGTTCTCACGTTTTCTTGTTGTGTACTCCTCGCAGC TCAGAACTTCTGCCCTCTTTCTTAGGGATGCCCTGTTTTGATAGCGGGTTTGTTTTCTTT AATTAGACTTGTTTCTTTTTGGCTTGAGATTTTAACCTGATCTGCTGCATCTTGATTGTG TAGCGAAGTCATTGTCTAAGCAATTGCATCCAAAGCTGCGAATCATTATCATGCTAGTGT TGATTTTCAGCCTGGGTCGATCTTGAGTTCCCTTGTGTAGTCAACCTTGTTGCAGTAGTA TATAGGTCGATTTCCGCTGAGGTGGGTATACTATTGTTTCTCTATTAAACACCGCATTGA TTGTTTTCATTTAACTACATACTGT
■■Homology search results ■■	-
Swiss-Prot (release 56.9)	Link to BlastX Result : Swiss-Prot
sp_hit_id	P57989
Definition	sp\|P57989\|CSD_PASMU Probable cysteine desulfurase OS=Pasteurella multocida
Align length	20
Score (bit)	31.2
E-value	3.7
Report	BLASTX 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= DK955216\|Adiantum capillus-veneris mRNA, clone: TST39A01NGRL0022_I02, 5' (565 letters) Database: uniprot_sprot.fasta 412,525 sequences; 148,809,765 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value sp\|P57989\|CSD_PASMU Probable cysteine desulfurase OS=Pasteurella... 31 3.7 sp\|Q25255\|PE44_LUCCU Peritrophin-44 OS=Lucilia cuprina PE=1 SV=1 30 6.4 >sp\|P57989\|CSD_PASMU Probable cysteine desulfurase OS=Pasteurella multocida GN=csd PE=3 SV=1 Length = 421 Score = 31.2 bits (69), Expect = 3.7 Identities = 13/20 (65%), Positives = 16/20 (80%) Frame = +3 Query: 351 LDCVAKSLSKQLHPKLRIII 410 ++CVA+ LS QLHPK III Sbjct: 114 INCVARGLSHQLHPKAEIII 133 >sp\|Q25255\|PE44_LUCCU Peritrophin-44 OS=Lucilia cuprina PE=1 SV=1 Length = 356 Score = 30.4 bits (67), Expect = 6.4 Identities = 14/39 (35%), Positives = 23/39 (58%), Gaps = 4/39 (10%) Frame = +1 Query: 199 TECSHVFLLCTPRSSELLP----SFLGMPCFDSGFVFFN 303 TEC + FL+C +S+ + ++G+PC D + FFN Sbjct: 299 TECKN-FLICKNETSQGMAYNYAKYIGLPCTDKNYPFFN 336
TrEMBL (release 39.9)	Link to BlastX Result : TrEMBL
tr_hit_id	Q8VAG6
Definition	tr\|Q8VAG6\|Q8VAG6_WSSV Wsv450 (WSSV510) OS=White spot syndrome virus
Align length	51
Score (bit)	34.7
E-value	3.7
Report	BLASTX 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= DK955216\|Adiantum capillus-veneris mRNA, clone: TST39A01NGRL0022_I02, 5' (565 letters) Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value tr\|Q8VAG6\|Q8VAG6_WSSV Wsv450 (WSSV510) OS=White spot syndrome vi... 35 3.7 >tr\|Q8VAG6\|Q8VAG6_WSSV Wsv450 (WSSV510) OS=White spot syndrome virus PE=4 SV=1 Length = 157 Score = 34.7 bits (78), Expect = 3.7 Identities = 19/51 (37%), Positives = 28/51 (54%) Frame = +2 Query: 182 ILLTILQNVLTFSCCVLLAAQNFCPLS*GCPVLIAGLFSLIRLVSFWLEIL 334 I+L++L+ + +FSC L A +S GCP S+ L+SF EIL Sbjct: 78 IILSVLEEIASFSCLALELAMRRSHISLGCPCSFVINSSIFFLLSFPFEIL 128