DK955218 |
Clone id |
TST39A01NGRL0022_I04 |
Library |
TST39 |
Length |
455 |
Definition |
Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0022_I04. 5' end sequence. |
Accession |
DK955218 |
Tissue type |
prothallia with plantlets |
Developmental stage |
gametophytes with sporophytes |
Contig ID |
CL2678Contig1 |
Sequence |
GTGAATTGTGACGTTCTTCATGGTGAATTGTGATGTTGCCTTGTTGGTTTGGAGCTTGTG AAGGGGAAGGATATCATCGCTATTCTTTCATCAACAGCTAGCTGATGAGGCACATTCACA TGTGGCTCTTCTGCCACTACATCCAGATGTACGTGCAAAGTTTAACAGTAGTGCAGCTTG GTAACATGCAAGGATGATGGATGGGAAACCGTATGGATATCATAGTTTGATTTTCAGCTG GATTGACACAAAAACTGACAATTTTCCACCTCTAGTTGATGCACATCTGGTGATGTCTGT TATGACTCTTTGGACGCAAATGCAGCCAGACTAAGCGGCAAACATGTGGAATGAAGCATT GAATAAAAGGTGGGCAAATCCTTTGCCTATGGTCCGTGTGGTGGGAAAATCCTTTGTCTC TCCTGCGGTTGGCATTGGCACCCTTTGCATCATCT |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
O53657 |
Definition |
sp|O53657|MMPL3_MYCTU Putative membrane protein mmpL3 OS=Mycobacterium tuberculosis |
Align length |
63 |
Score (bit) |
30.8 |
E-value |
2.9 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
Q9SZ41 |
Definition |
tr|Q9SZ41|Q9SZ41_ARATH Putative uncharacterized protein F10M23.360 (At4g27020/F10M23_360) (Putative uncharacterized protein AT4g27020) OS=Arabidopsis thaliana |
Align length |
93 |
Score (bit) |
145.0 |
E-value |
8.0e-34 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK955218|Adiantum capillus-veneris mRNA, clone: TST39A01NGRL0022_I04, 5' (455 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|Q9SZ41|Q9SZ41_ARATH Putative uncharacterized protein F10M23.3... 145 8e-34 tr|B8LP81|B8LP81_PICSI Putative uncharacterized protein OS=Picea... 145 8e-34 tr|A9TA22|A9TA22_PHYPA Predicted protein OS=Physcomitrella paten... 145 8e-34 tr|Q9FFU3|Q9FFU3_ARATH Genomic DNA, chromosome 5, P1 clone:MBG8 ... 145 1e-33 tr|A9NVI8|A9NVI8_PICSI Putative uncharacterized protein OS=Picea... 143 5e-33 tr|Q9C5K0|Q9C5K0_ARATH Putative uncharacterized protein At1g7016... 142 6e-33 tr|Q56WL6|Q56WL6_ARATH Putative uncharacterized protein At1g7016... 142 6e-33 tr|O04530|O04530_ARATH F20P5.12 protein OS=Arabidopsis thaliana ... 142 6e-33 tr|A7Q2K1|A7Q2K1_VITVI Chromosome chr1 scaffold_46, whole genome... 142 8e-33 tr|A2WVX5|A2WVX5_ORYSI Putative uncharacterized protein OS=Oryza... 142 1e-32 tr|Q8S1L2|Q8S1L2_ORYSJ Putative uncharacterized protein P0684C02... 141 1e-32 tr|Q5ZBU1|Q5ZBU1_ORYSJ cDNA clone:J033024J15, full insert sequen... 141 1e-32 tr|Q0JIL6|Q0JIL6_ORYSJ Os01g0793500 protein (Fragment) OS=Oryza ... 141 1e-32 tr|A2ZYL2|A2ZYL2_ORYSJ Putative uncharacterized protein OS=Oryza... 141 1e-32 tr|B6TSK0|B6TSK0_MAIZE Putative uncharacterized protein OS=Zea m... 140 4e-32 tr|B6SW19|B6SW19_MAIZE Putative uncharacterized protein OS=Zea m... 140 4e-32 tr|B4G1X6|B4G1X6_MAIZE Putative uncharacterized protein OS=Zea m... 140 4e-32 tr|B4G0B4|B4G0B4_MAIZE Putative uncharacterized protein OS=Zea m... 140 4e-32 tr|Q6H416|Q6H416_ORYSJ Os09g0392000 protein OS=Oryza sativa subs... 139 5e-32 tr|B6SZ90|B6SZ90_MAIZE Putative uncharacterized protein OS=Zea m... 139 5e-32 tr|A7P0T1|A7P0T1_VITVI Chromosome chr19 scaffold_4, whole genome... 139 5e-32 tr|A2Z0X5|A2Z0X5_ORYSI Putative uncharacterized protein OS=Oryza... 139 5e-32 tr|Q7EZU2|Q7EZU2_ORYSJ Os08g0425000 protein OS=Oryza sativa subs... 137 2e-31 tr|B8BAZ5|B8BAZ5_ORYSI Putative uncharacterized protein OS=Oryza... 137 2e-31 tr|A3BT99|A3BT99_ORYSJ Putative uncharacterized protein OS=Oryza... 137 2e-31 tr|A7P0T4|A7P0T4_VITVI Chromosome chr19 scaffold_4, whole genome... 135 1e-30 tr|A5AXY6|A5AXY6_VITVI Putative uncharacterized protein OS=Vitis... 135 1e-30 tr|A9TSP9|A9TSP9_PHYPA Predicted protein OS=Physcomitrella paten... 131 1e-29 tr|A0DFG2|A0DFG2_PARTE Chromosome undetermined scaffold_49, whol... 78 2e-13 tr|A0CDJ5|A0CDJ5_PARTE Chromosome undetermined scaffold_17, whol... 76 7e-13
>tr|Q9SZ41|Q9SZ41_ARATH Putative uncharacterized protein F10M23.360 (At4g27020/F10M23_360) (Putative uncharacterized protein AT4g27020) OS=Arabidopsis thaliana GN=F10M23.360 PE=2 SV=1 Length = 523
Score = 145 bits (367), Expect = 8e-34 Identities = 65/93 (69%), Positives = 80/93 (86%) Frame = +2
Query: 92 QQLADEAHSHVALLPLHPDVRAKFNSSAAW*HARMMDGKPYGYHSLIFSWIDTKTDNFPP 271 +Q D+++ H+ALLPLHPD RAKFN +AAW +AR MDGKPYGYH+LIFSWIDT + N+PP Sbjct: 289 EQTKDDSNPHIALLPLHPDYRAKFNVTAAWEYARSMDGKPYGYHNLIFSWIDTISGNYPP 348
Query: 272 LVDAHLVMSVMTLWTQMQPD*AANMWNEALNKR 370 +DA LV SVMT+W+++QPD AANMWNEALNKR Sbjct: 349 PLDAQLVASVMTVWSKIQPDYAANMWNEALNKR 381
>tr|B8LP81|B8LP81_PICSI Putative uncharacterized protein OS=Picea sitchensis PE=2 SV=1 Length = 520
Score = 145 bits (367), Expect = 8e-34 Identities = 65/96 (67%), Positives = 81/96 (84%) Frame = +2
Query: 83 FFHQQLADEAHSHVALLPLHPDVRAKFNSSAAW*HARMMDGKPYGYHSLIFSWIDTKTDN 262 +F +Q D ++ HVALLPLH D+RAKFN++AAW + M G+PYGYH++IFSWIDT TDN Sbjct: 283 WFDEQQKDISNPHVALLPLHSDLRAKFNATAAWAYVLNMSGEPYGYHNMIFSWIDTLTDN 342
Query: 263 FPPLVDAHLVMSVMTLWTQMQPD*AANMWNEALNKR 370 +PP +DAHLV+SVMT+W +MQPD AANMWNEALNKR Sbjct: 343 YPPPLDAHLVVSVMTIWNRMQPDYAANMWNEALNKR 378
>tr|A9TA22|A9TA22_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_193010 PE=4 SV=1 Length = 525
Score = 145 bits (367), Expect = 8e-34 Identities = 64/92 (69%), Positives = 80/92 (86%) Frame = +2
Query: 95 QLADEAHSHVALLPLHPDVRAKFNSSAAW*HARMMDGKPYGYHSLIFSWIDTKTDNFPPL 274 Q+AD A+ H+A+LPLHPDVRAKFN +AAW +AR M G PYGYH++IFSWIDT TDN+PP Sbjct: 293 QIADVANCHLAVLPLHPDVRAKFNVTAAWEYARRMSGAPYGYHNMIFSWIDTPTDNYPPP 352
Query: 275 VDAHLVMSVMTLWTQMQPD*AANMWNEALNKR 370 +D++LV S +T+WT++QPD AANMWNEALNKR Sbjct: 353 LDSNLVASAITMWTRLQPDFAANMWNEALNKR 384
>tr|Q9FFU3|Q9FFU3_ARATH Genomic DNA, chromosome 5, P1 clone:MBG8 OS=Arabidopsis thaliana PE=4 SV=1 Length = 531
Score = 145 bits (366), Expect = 1e-33 Identities = 64/93 (68%), Positives = 81/93 (87%) Frame = +2
Query: 92 QQLADEAHSHVALLPLHPDVRAKFNSSAAW*HARMMDGKPYGYHSLIFSWIDTKTDNFPP 271 +Q D+++ +ALLPLHPDVRAKF+ +AAW +AR M+GKPYGYH+LIFSWIDT ++N+PP Sbjct: 297 EQTKDDSNPQIALLPLHPDVRAKFDVAAAWKYARSMEGKPYGYHNLIFSWIDTVSENYPP 356
Query: 272 LVDAHLVMSVMTLWTQMQPD*AANMWNEALNKR 370 +DAHLV S MT+W+QMQP+ AANMWNEALNKR Sbjct: 357 PLDAHLVASFMTVWSQMQPEYAANMWNEALNKR 389
>tr|A9NVI8|A9NVI8_PICSI Putative uncharacterized protein OS=Picea sitchensis PE=2 SV=1 Length = 521
Score = 143 bits (360), Expect = 5e-33 Identities = 62/92 (67%), Positives = 80/92 (86%) Frame = +2
Query: 95 QLADEAHSHVALLPLHPDVRAKFNSSAAW*HARMMDGKPYGYHSLIFSWIDTKTDNFPPL 274 +L D ++ +ALLPL PD+RAKFN++AAW +AR M GKPYGYH++IFSWIDT TDN+PP Sbjct: 288 ELKDSSNPQIALLPLDPDLRAKFNATAAWDYARNMSGKPYGYHNMIFSWIDTITDNYPPP 347
Query: 275 VDAHLVMSVMTLWTQMQPD*AANMWNEALNKR 370 +DAHLV+S+M +WT++QP+ AANMWNEALNKR Sbjct: 348 LDAHLVLSIMAMWTRVQPNYAANMWNEALNKR 379
>tr|Q9C5K0|Q9C5K0_ARATH Putative uncharacterized protein At1g70160 OS=Arabidopsis thaliana GN=At1g70160 PE=2 SV=1 Length = 523
Score = 142 bits (359), Expect = 6e-33 Identities = 64/91 (70%), Positives = 79/91 (86%) Frame = +2
Query: 98 LADEAHSHVALLPLHPDVRAKFNSSAAW*HARMMDGKPYGYHSLIFSWIDTKTDNFPPLV 277 L D ++ VALLPLHPD+RAKFN++AAW +AR M GKPYGYH++IFSWIDT DN+PP + Sbjct: 292 LKDNSNPQVALLPLHPDIRAKFNNTAAWEYARSMLGKPYGYHNMIFSWIDTLGDNYPPPL 351
Query: 278 DAHLVMSVMTLWTQMQPD*AANMWNEALNKR 370 DAHLV+SVM++WT++QP AANMWNEALNKR Sbjct: 352 DAHLVISVMSMWTRVQPAYAANMWNEALNKR 382
>tr|Q56WL6|Q56WL6_ARATH Putative uncharacterized protein At1g70160 (Fragment) OS=Arabidopsis thaliana GN=At1g70160 PE=2 SV=1 Length = 258
Score = 142 bits (359), Expect = 6e-33 Identities = 64/91 (70%), Positives = 79/91 (86%) Frame = +2
Query: 98 LADEAHSHVALLPLHPDVRAKFNSSAAW*HARMMDGKPYGYHSLIFSWIDTKTDNFPPLV 277 L D ++ VALLPLHPD+RAKFN++AAW +AR M GKPYGYH++IFSWIDT DN+PP + Sbjct: 27 LKDNSNPQVALLPLHPDIRAKFNNTAAWEYARSMLGKPYGYHNMIFSWIDTLGDNYPPPL 86
Query: 278 DAHLVMSVMTLWTQMQPD*AANMWNEALNKR 370 DAHLV+SVM++WT++QP AANMWNEALNKR Sbjct: 87 DAHLVISVMSMWTRVQPAYAANMWNEALNKR 117
>tr|O04530|O04530_ARATH F20P5.12 protein OS=Arabidopsis thaliana GN=F20P5.12 PE=4 SV=1 Length = 551
Score = 142 bits (359), Expect = 6e-33 Identities = 64/91 (70%), Positives = 79/91 (86%) Frame = +2
Query: 98 LADEAHSHVALLPLHPDVRAKFNSSAAW*HARMMDGKPYGYHSLIFSWIDTKTDNFPPLV 277 L D ++ VALLPLHPD+RAKFN++AAW +AR M GKPYGYH++IFSWIDT DN+PP + Sbjct: 320 LKDNSNPQVALLPLHPDIRAKFNNTAAWEYARSMLGKPYGYHNMIFSWIDTLGDNYPPPL 379
Query: 278 DAHLVMSVMTLWTQMQPD*AANMWNEALNKR 370 DAHLV+SVM++WT++QP AANMWNEALNKR Sbjct: 380 DAHLVISVMSMWTRVQPAYAANMWNEALNKR 410
>tr|A7Q2K1|A7Q2K1_VITVI Chromosome chr1 scaffold_46, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00028917001 PE=4 SV=1 Length = 520
Score = 142 bits (358), Expect = 8e-33 Identities = 63/91 (69%), Positives = 78/91 (85%) Frame = +2
Query: 98 LADEAHSHVALLPLHPDVRAKFNSSAAW*HARMMDGKPYGYHSLIFSWIDTKTDNFPPLV 277 L D ++ +ALLPLHPD+RAKFN++AAW +AR M GKPYGYH++IFSWIDT DN+PP + Sbjct: 289 LKDNSNPQIALLPLHPDLRAKFNATAAWEYARSMAGKPYGYHNMIFSWIDTIADNYPPPL 348
Query: 278 DAHLVMSVMTLWTQMQPD*AANMWNEALNKR 370 DAHLV+SVM++WT+MQP A NMWNEALNKR Sbjct: 349 DAHLVISVMSMWTRMQPAYAENMWNEALNKR 379
>tr|A2WVX5|A2WVX5_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_04050 PE=4 SV=1 Length = 405
Score = 142 bits (357), Expect = 1e-32 Identities = 61/94 (64%), Positives = 79/94 (84%) Frame = +2
Query: 104 DEAHSHVALLPLHPDVRAKFNSSAAW*HARMMDGKPYGYHSLIFSWIDTKTDNFPPLVDA 283 D+++ +ALLPLHPD+RAKFN +AAW +A+ MDGKPYGYH++IFSWIDT +DN+PP +DA Sbjct: 309 DDSNPQIALLPLHPDLRAKFNETAAWEYAKSMDGKPYGYHNMIFSWIDTISDNYPPPLDA 368
Query: 284 HLVMSVMTLWTQMQPD*AANMWNEALNKRWANPL 385 H+V SVMT+W ++QP+ AANMW EALNKR L Sbjct: 369 HVVASVMTMWNKLQPEYAANMWKEALNKRLGTKL 402
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