DK955222
Clone id TST39A01NGRL0022_I08
Library
Length 543
Definition Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0022_I08. 5' end sequence.
Accession
Tissue type prothallia with plantlets
Developmental stage gametophytes with sporophytes
Contig ID
Sequence
TGCTCGTGCAGCTTCCTCACCTTCGAAGTCCTAACCCTATCACGCAGAGCTTGCTCCTCA
CTGCGTCATCATCAGTTTCTACAGATCCGTCGTTTCTCTGTGTCCGGCAGAAGATGCACT
TCTTGGCATCTGGTCTTTTCTTACATAATGCAGGGAAGCGAGCTAAATGGACAGCAAGAA
ATTTCTGCAGCTTGTCGAGGAGAAGAAAAAGAGGGCCTTGGAGAAGAAGCAAGCTCGCCT
AGAGTGGGAGGAGAGGCTTGAAGAGGCAGCAAGGGTATCAAGCCGAGAGGAGAAACGAAG
CCACAAGAAACATAAGAGAAGAGTGTCATCAGACTCGTCTGTGGATGCAGAGCCCAATCG
GAAGAGTGCTCGAAGGCACAAAAAGAAACGTTCGTCTTCTGGGTCCTCTGATGATGATAG
AGAGGGCCGGACTGAGAGAAAGTCTCATGTAAAGCATAGAAGAAGAGGTTCAAGTACTGA
TTCAAGTGGCTCTGATTCGGATGGGGCTGGGCACAGGTCACGACGAAGACATAGAAGGAG
ACA
■■Homology search results ■■ -
sp_hit_id P54210
Definition sp|P54210|PMA1_DUNAC Plasma membrane ATPase OS=Dunaliella acidophila
Align length 74
Score (bit) 30.0
E-value 7.0
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK955222|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0022_I08, 5'
(525 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|P54210|PMA1_DUNAC Plasma membrane ATPase OS=Dunaliella acidop... 30 7.0
sp|P27864|RRP1_DROME Recombination repair protein 1 OS=Drosophil... 30 9.2

>sp|P54210|PMA1_DUNAC Plasma membrane ATPase OS=Dunaliella
acidophila GN=DHA1 PE=2 SV=1
Length = 1103

Score = 30.0 bits (66), Expect = 7.0
Identities = 26/74 (35%), Positives = 34/74 (45%), Gaps = 6/74 (8%)
Frame = -2

Query: 449 LFFYALHETF-SQSGPLYHHQRTQKTNVSFCAFEHSSDWALHPQTSLMTLFSYV----SC 285
L+ A H TF + PL T +S+C E SS ++PQ SL T SY C
Sbjct: 755 LYQVATHSTFFERMTPLPSLNTQHATLISWCEDEISSKLGVNPQDSLCTYPSYADQLNEC 814

Query: 284 -GFVSPLGLIPLLP 246
G VS +P +P
Sbjct: 815 KGSVSLSSQVPGVP 828


>sp|P27864|RRP1_DROME Recombination repair protein 1 OS=Drosophila
melanogaster GN=Rrp1 PE=1 SV=2
Length = 679

Score = 29.6 bits (65), Expect = 9.2
Identities = 22/72 (30%), Positives = 34/72 (47%)
Frame = +1

Query: 148 NGQQEISAACRGEEKEGLGEEASSPRVGGEA*RGSKGIKPRGETKPQET*EKSVIRLVCG 327
NGQ E+ A +G K+ E P+V A K KPR + +P ++ G
Sbjct: 90 NGQMEVVAKPKGRAKKATAEAEPEPKVDLPA---GKATKPRAKKEPTPAPDEVTSSPPKG 146

Query: 328 CRAQSEECSKAQ 363
RA++E+ + AQ
Sbjct: 147 -RAKAEKPTNAQ 157


tr_hit_id Q38M44
Definition tr|Q38M44|Q38M44_SOLTU Putative uncharacterized protein OS=Solanum tuberosum
Align length 22
Score (bit) 42.4
E-value 0.014
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK955222|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0022_I08, 5'
(525 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|Q38M44|Q38M44_SOLTU Putative uncharacterized protein OS=Solan... 42 0.014
tr|A7P3H2|A7P3H2_VITVI Chromosome chr1 scaffold_5, whole genome ... 42 0.024
tr|Q9LGP3|Q9LGP3_ORYSJ cDNA clone:J013098B14, full insert sequen... 41 0.032
tr|A2WK25|A2WK25_ORYSI Putative uncharacterized protein OS=Oryza... 41 0.032
tr|B6TJ99|B6TJ99_MAIZE Sarcoplasmic reticulum histidine-rich cal... 40 0.071
tr|B4FPU5|B4FPU5_MAIZE Putative uncharacterized protein OS=Zea m... 40 0.071
tr|B6TJG2|B6TJG2_MAIZE Sarcoplasmic reticulum histidine-rich cal... 37 0.46
tr|Q9SJV6|Q9SJV6_ARATH Expressed protein (At2g01100/F23H14.7) (P... 37 0.78
tr|Q8BQP1|Q8BQP1_MOUSE Novel protein OS=Mus musculus GN=OTTMUSG0... 33 6.6
tr|Q1NV33|Q1NV33_9DELT DNA gyrase, subunit A OS=delta proteobact... 33 6.6
tr|Q1NPP5|Q1NPP5_9DELT DNA gyrase, subunit A OS=delta proteobact... 33 6.6
tr|Q90783|Q90783_CHICK ProcKr2 (Fragment) OS=Gallus gallus GN=cK... 33 8.6
tr|B3L3A0|B3L3A0_PLAKH Transporter, putative OS=Plasmodium knowl... 33 8.6
tr|B8BIJ3|B8BIJ3_ORYSI Putative uncharacterized protein OS=Oryza... 33 8.8

>tr|Q38M44|Q38M44_SOLTU Putative uncharacterized protein OS=Solanum
tuberosum PE=2 SV=1
Length = 265

Score = 42.4 bits (98), Expect = 0.014
Identities = 19/22 (86%), Positives = 22/22 (100%)
Frame = +2

Query: 149 MDSKKFLQLVEEKKKRALEKKQ 214
MD+KKF+QLVEEKKKRALEKK+
Sbjct: 1 MDAKKFMQLVEEKKKRALEKKE 22


>tr|A7P3H2|A7P3H2_VITVI Chromosome chr1 scaffold_5, whole genome
shotgun sequence OS=Vitis vinifera GN=GSVIVT00030442001
PE=4 SV=1
Length = 340

Score = 41.6 bits (96), Expect = 0.024
Identities = 19/22 (86%), Positives = 21/22 (95%)
Frame = +2

Query: 149 MDSKKFLQLVEEKKKRALEKKQ 214
MD KKF+QLVEEKKKRALEKK+
Sbjct: 1 MDCKKFIQLVEEKKKRALEKKE 22


>tr|Q9LGP3|Q9LGP3_ORYSJ cDNA clone:J013098B14, full insert sequence
OS=Oryza sativa subsp. japonica GN=P0684C01.4 PE=2 SV=2
Length = 285

Score = 41.2 bits (95), Expect = 0.032
Identities = 19/22 (86%), Positives = 21/22 (95%)
Frame = +2

Query: 149 MDSKKFLQLVEEKKKRALEKKQ 214
MDSKKFLQL+EEKKKR LEKK+
Sbjct: 1 MDSKKFLQLLEEKKKRILEKKE 22


>tr|A2WK25|A2WK25_ORYSI Putative uncharacterized protein OS=Oryza
sativa subsp. indica GN=OsI_00168 PE=4 SV=1
Length = 285

Score = 41.2 bits (95), Expect = 0.032
Identities = 19/22 (86%), Positives = 21/22 (95%)
Frame = +2

Query: 149 MDSKKFLQLVEEKKKRALEKKQ 214
MDSKKFLQL+EEKKKR LEKK+
Sbjct: 1 MDSKKFLQLLEEKKKRILEKKE 22


>tr|B6TJ99|B6TJ99_MAIZE Sarcoplasmic reticulum histidine-rich
calcium-binding protein OS=Zea mays PE=2 SV=1
Length = 275

Score = 40.0 bits (92), Expect = 0.071
Identities = 18/22 (81%), Positives = 21/22 (95%)
Frame = +2

Query: 149 MDSKKFLQLVEEKKKRALEKKQ 214
MD+KKFLQLVEEKK+R LEKK+
Sbjct: 1 MDAKKFLQLVEEKKRRILEKKE 22


>tr|B4FPU5|B4FPU5_MAIZE Putative uncharacterized protein OS=Zea mays
PE=2 SV=1
Length = 275

Score = 40.0 bits (92), Expect = 0.071
Identities = 18/22 (81%), Positives = 21/22 (95%)
Frame = +2

Query: 149 MDSKKFLQLVEEKKKRALEKKQ 214
MD+KKFLQLVEEKK+R LEKK+
Sbjct: 1 MDAKKFLQLVEEKKRRILEKKE 22


>tr|B6TJG2|B6TJG2_MAIZE Sarcoplasmic reticulum histidine-rich
calcium-binding protein OS=Zea mays PE=2 SV=1
Length = 247

Score = 37.4 bits (85), Expect = 0.46
Identities = 16/22 (72%), Positives = 20/22 (90%)
Frame = +2

Query: 149 MDSKKFLQLVEEKKKRALEKKQ 214
MD+K+FL LVEEKK+R LEKK+
Sbjct: 1 MDAKRFLHLVEEKKRRVLEKKE 22


>tr|Q9SJV6|Q9SJV6_ARATH Expressed protein (At2g01100/F23H14.7)
(Putative uncharacterized protein) OS=Arabidopsis
thaliana GN=At2g01100 PE=2 SV=1
Length = 247

Score = 36.6 bits (83), Expect = 0.78
Identities = 15/22 (68%), Positives = 20/22 (90%)
Frame = +2

Query: 149 MDSKKFLQLVEEKKKRALEKKQ 214
MD KKF+Q+VEEKK+R LEK++
Sbjct: 1 MDCKKFIQMVEEKKRRVLEKQE 22


>tr|Q8BQP1|Q8BQP1_MOUSE Novel protein OS=Mus musculus
GN=OTTMUSG00000003802 PE=2 SV=1
Length = 125

Score = 33.5 bits (75), Expect = 6.6
Identities = 19/63 (30%), Positives = 30/63 (47%), Gaps = 1/63 (1%)
Frame = -2

Query: 419 SQSGPLYHHQRTQKT-NVSFCAFEHSSDWALHPQTSLMTLFSYVSCGFVSPLGLIPLLPL 243
++S PL HH R KT + +F F S +W H + L CG+ P ++ +
Sbjct: 54 AESLPLLHHLREDKTRHGTFKGFSWSPEWTCHIAEDDLELLMPSKCGYYRPAYVVLRIKA 113

Query: 242 QAS 234
+AS
Sbjct: 114 RAS 116


>tr|Q1NV33|Q1NV33_9DELT DNA gyrase, subunit A OS=delta proteobacterium
MLMS-1 GN=MldDRAFT_0527 PE=4 SV=1
Length = 850

Score = 33.5 bits (75), Expect = 6.6
Identities = 26/97 (26%), Positives = 47/97 (48%)
Frame = +3

Query: 231 RRGLKRQQGYQAERRNEATRNIREECHQTRLWMQSPIGRVLEGTKRNVRLLGPLMMIERA 410
RRG K +A RN + + C ++ M + G+++ + +R++G
Sbjct: 751 RRGGKGVMAIKASERNGEVVGMSQVCDDDQVMMITNRGQIIRMPMQGIRVIGR----STQ 806

Query: 411 GLRESLM*SIEEEVQVLIQVALIRMGLGTGHDEDIEG 521
G+R + +++ E +V VAL R+ G G D+D EG
Sbjct: 807 GVR---LFNLDNEEKV---VALDRLAEGNGDDDDEEG 837