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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
DK955225
Clone id TST39A01NGRL0022_I11
Library
Length 587
Definition Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0022_I11. 5' end sequence.
Accession
Tissue type prothallia with plantlets
Developmental stage gametophytes with sporophytes
Contig ID
Sequence 
CCAGCGCTCTCTCTCTCTCTCTCTCTCTCTCTCTCACACACACACACACACACACACACA
CACACACAGCGTCTCCTCGTTCTATTGGCCTCCAGGTCTCCACAACTCATCACAGCGCGT
ATAGTACTTCGCTCAACATGATGATGAAGCTGAATACTGTGGATGAGCGCATGGGGCTCA
TGCTAAAAGGACGTCATTCAAACAATTTTTTTGAGAAAGGCATGCCCGCAGTCTGCCGGT
TCTCTTCAAGCACCAACCCTTACAAATTCAGCAAGATGATGAAGGTGAATGCAGACAGGA
GCATTATTTTAGCTACTCCTAATGCCAGCTATGCTGCTCCCTTGGAAGCCTCCTTTGGAT
CTTCCTTTATCATCCGTCCATTGGCAGAGATCTTGCGTGATTTAAACAAGAAGGTTCCAG
ACCAGGTTCTTCTAGGAAAACCTGGGAGTTCCCAGCAAAAACACATCCCCTGGTACCAAG
CAAATCGTATGCTCAGCTTTTATGCCCCAGGTTGGTGTGGTGAAGTGCGCGATATAACCT
TCTCTGCAGATGGAAAATTTGTAACGGTCATCTATCGTGTCACAATC
■■Homology search results ■■ -
sp_hit_id Q21921
Definition sp|Q21921|SIRT1_CAEEL NAD-dependent deacetylase SIR2 homolog OS=Caenorhabditis elegans
Align length 73
Score (bit) 32.7
E-value 1.4
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK955225|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0022_I11, 5'
         (587 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q21921|SIRT1_CAEEL NAD-dependent deacetylase SIR2 homolog OS=...    33   1.4  
sp|Q6ZEZ5|NEK3_ORYSJ Serine/threonine-protein kinase Nek3 OS=Ory...    32   2.3  
sp|Q5F3M0|MED24_CHICK Mediator of RNA polymerase II transcriptio...    32   3.1  
sp|P27169|PON1_HUMAN Serum paraoxonase/arylesterase 1 OS=Homo sa...    31   4.0  
sp|Q60L58|SIRT1_CAEBR NAD-dependent deacetylase SIR2 homolog OS=...    31   5.2  

>sp|Q21921|SIRT1_CAEEL NAD-dependent deacetylase SIR2 homolog
           OS=Caenorhabditis elegans GN=sir-2.1 PE=1 SV=1
          Length = 607

 Score = 32.7 bits (73), Expect = 1.4
 Identities = 26/73 (35%), Positives = 39/73 (53%), Gaps = 1/73 (1%)
 Frame = +3

Query: 357 GSSFIIRPLAEILRDLNKKVPDQVLLGKPGSSQQKHIPWYQANRMLSFYAPGWCGE-VRD 533
           GSS  +RP+A I   ++K VP Q+L+ +      + +P Y A+  L     G C + +RD
Sbjct: 327 GSSLKVRPVALIPHCVDKNVP-QILINR------ESLPHYNADIELL----GNCDDIIRD 375

Query: 534 ITFSADGKFVTVI 572
           I FS  G F  +I
Sbjct: 376 ICFSLGGSFTELI 388


>sp|Q6ZEZ5|NEK3_ORYSJ Serine/threonine-protein kinase Nek3 OS=Oryza
           sativa subsp. japonica GN=NEK3 PE=2 SV=1
          Length = 585

 Score = 32.0 bits (71), Expect = 2.3
 Identities = 23/90 (25%), Positives = 37/90 (41%), Gaps = 3/90 (3%)
 Frame = +3

Query: 177 LMLKGRHSNNFFEKGMPAVCRFSSSTNPYKFSKMMKVNADRSIILATPNASYAAPLEASF 356
           L LK   + N F     A C    +    K+SK      DR + +    A+   P     
Sbjct: 265 LQLKSSPARNLFPDTNKASCSDDENNWKAKYSKSHSFKVDRIVKVDKVAANNGHPSSTGT 324

Query: 357 GSSF---IIRPLAEILRDLNKKVPDQVLLG 437
              +   + +P+ E+L  L +KV D+V+ G
Sbjct: 325 AKDYQELLKQPMDELLGQLTEKVVDEVIHG 354


>sp|Q5F3M0|MED24_CHICK Mediator of RNA polymerase II transcription
            subunit 24 OS=Gallus gallus GN=MED24 PE=2 SV=1
          Length = 986

 Score = 31.6 bits (70), Expect = 3.1
 Identities = 20/76 (26%), Positives = 39/76 (51%), Gaps = 1/76 (1%)
 Frame = +3

Query: 252  TNPYKFSKMMKVNADRSIILATPNASYAAPLEASFGSSFIIR-PLAEILRDLNKKVPDQV 428
            T P K  +++  N + + IL++PN S ++ L AS   +  +R PL  +L +L   +   +
Sbjct: 850  TRPSKLMRLLSSNEEDANILSSPNRSMSSSLSASQLHAVSMRDPLNRVLANLFLLI-SSI 908

Query: 429  LLGKPGSSQQKHIPWY 476
            L  K   +  + + W+
Sbjct: 909  LGSKTAGTHTQFVQWF 924


>sp|P27169|PON1_HUMAN Serum paraoxonase/arylesterase 1 OS=Homo
           sapiens GN=PON1 PE=1 SV=2
          Length = 355

 Score = 31.2 bits (69), Expect = 4.0
 Identities = 26/96 (27%), Positives = 41/96 (42%), Gaps = 1/96 (1%)
 Frame = +3

Query: 84  IGLQVSTTHHSAYSTSLNMMMKLNTVDERMGLMLKGRHSNNFFEKGMPAVCRFSSSTNPY 263
           +GL +   H S+Y T LN + ++  V+     ++KG  + +   + +P    F SS   Y
Sbjct: 12  MGLALFRNHQSSYQTRLNALREVQPVELPNCNLVKGIETGSEDMEILPNGLAFISSGLKY 71

Query: 264 KFSKMMKVNADRSIILATPNASYAAPLEASF-GSSF 368
              K    N+   I+L   N      LE    GS F
Sbjct: 72  PGIKSFNPNSPGKILLMDLNEEDPTVLELGITGSKF 107


>sp|Q60L58|SIRT1_CAEBR NAD-dependent deacetylase SIR2 homolog
           OS=Caenorhabditis briggsae GN=sir-2.1 PE=3 SV=1
          Length = 602

 Score = 30.8 bits (68), Expect = 5.2
 Identities = 25/73 (34%), Positives = 39/73 (53%), Gaps = 1/73 (1%)
 Frame = +3

Query: 357 GSSFIIRPLAEILRDLNKKVPDQVLLGKPGSSQQKHIPWYQANRMLSFYAPGWCGE-VRD 533
           GSS  +RP+A I   ++K VP Q+L+ +      + +P Y A+  L     G C + VRD
Sbjct: 318 GSSLKVRPVALIPHCVDKNVP-QILINR------ESLPHYNADIELL----GNCDDIVRD 366

Query: 534 ITFSADGKFVTVI 572
           I ++  G F  +I
Sbjct: 367 ICYALGGSFAEMI 379
tr_hit_id A9TQS9
Definition tr|A9TQS9|A9TQS9_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens
Align length 93
Score (bit) 126.0
E-value 1.0e-27
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK955225|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0022_I11, 5'
         (587 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|A9TQS9|A9TQS9_PHYPA Predicted protein OS=Physcomitrella paten...   126   1e-27
tr|B8LN18|B8LN18_PICSI Putative uncharacterized protein OS=Picea...   124   4e-27
tr|A9NSX2|A9NSX2_PICSI Putative uncharacterized protein OS=Picea...   124   4e-27
tr|A9PGP3|A9PGP3_POPTR Putative uncharacterized protein OS=Popul...   113   7e-24
tr|Q9FIJ4|Q9FIJ4_ARATH Gb|AAF26028.1 (At5g47870) (Putative uncha...   111   3e-23
tr|Q8LAJ6|Q8LAJ6_ARATH Putative uncharacterized protein OS=Arabi...   111   3e-23
tr|B7ZZ71|B7ZZ71_MAIZE Putative uncharacterized protein OS=Zea m...   103   9e-21
tr|B6ST86|B6ST86_MAIZE SnRK1-interacting protein 1 OS=Zea mays P...   103   9e-21
tr|Q851Y4|Q851Y4_ORYSJ Putative uncharacterized protein OSJNBa00...   102   1e-20
tr|Q10AI2|Q10AI2_ORYSJ Os03g0851500 protein OS=Oryza sativa subs...   102   1e-20
tr|A3APT8|A3APT8_ORYSJ Putative uncharacterized protein OS=Oryza...   102   1e-20
tr|A2XP50|A2XP50_ORYSI Putative uncharacterized protein OS=Oryza...   102   1e-20
tr|A9TKB2|A9TKB2_PHYPA Predicted protein OS=Physcomitrella paten...   102   2e-20
tr|B6TP06|B6TP06_MAIZE SnRK1-interacting protein 1 OS=Zea mays P...   101   4e-20
tr|B6SJF4|B6SJF4_MAIZE SnRK1-interacting protein 1 OS=Zea mays P...    99   2e-19
tr|Q0J0F6|Q0J0F6_ORYSJ Os09g0512800 protein OS=Oryza sativa subs...    97   9e-19
tr|B8BDI1|B8BDI1_ORYSI Putative uncharacterized protein OS=Oryza...    97   9e-19
tr|A2ZVM7|A2ZVM7_ORYSJ Putative uncharacterized protein OS=Oryza...    97   9e-19
tr|Q9FVV7|Q9FVV7_ARATH Putative uncharacterized protein F3I17.4 ...    85   3e-15
tr|Q3E7S4|Q3E7S4_ARATH Uncharacterized protein At1g71310.3 OS=Ar...    85   3e-15
tr|A7Q7S8|A7Q7S8_VITVI Chromosome chr18 scaffold_61, whole genom...    83   1e-14
tr|A5C7M6|A5C7M6_VITVI Putative uncharacterized protein OS=Vitis...    83   1e-14
tr|B6TIS1|B6TIS1_MAIZE SnRK1-interacting protein 1 OS=Zea mays P...    80   8e-14
tr|Q9LEH5|Q9LEH5_HORVU SnRK1-interacting protein 1 OS=Hordeum vu...    77   5e-13
tr|Q8L4C2|Q8L4C2_ORYSJ Putative SnRK1-interacting protein 1 (Put...    77   5e-13
tr|Q69IP1|Q69IP1_ORYSJ Putative uncharacterized protein P0450E05...    77   5e-13
tr|B6TJX4|B6TJX4_MAIZE SnRK1-interacting protein 1 OS=Zea mays P...    75   2e-12
tr|B8A718|B8A718_ORYSI Putative uncharacterized protein OS=Oryza...    52   2e-05
tr|A7QTD0|A7QTD0_VITVI Chromosome chr1 scaffold_166, whole genom...    43   0.015
tr|B1XQW9|B1XQW9_SYNP2 Putative uncharacterized protein OS=Synec...    37   0.82 

>tr|A9TQS9|A9TQS9_PHYPA Predicted protein OS=Physcomitrella patens
           subsp. patens GN=PHYPADRAFT_149136 PE=4 SV=1
          Length = 152

 Score =  126 bits (316), Expect = 1e-27
 Identities = 63/93 (67%), Positives = 71/93 (76%), Gaps = 1/93 (1%)
 Frame = +3

Query: 312 ATPNASYAAPLEASFGSSFIIRPLAEILRDLNKKVPDQVLLGKPGSSQQ-KHIPWYQANR 488
           A P ASYA PLEAS   S I RPLAEI+RD+NK+VPD+VL  +       K+IPWY ANR
Sbjct: 6   AVPYASYAVPLEASKEQSLITRPLAEIMRDMNKRVPDKVLKTRSDEGVALKYIPWYHANR 65

Query: 489 MLSFYAPGWCGEVRDITFSADGKFVTVIYRVTI 587
           MLSFYAPGWCGEVR I FSADG  V+V+YRVTI
Sbjct: 66  MLSFYAPGWCGEVRSIVFSADGTTVSVVYRVTI 98


>tr|B8LN18|B8LN18_PICSI Putative uncharacterized protein OS=Picea
           sitchensis PE=2 SV=1
          Length = 195

 Score =  124 bits (311), Expect = 4e-27
 Identities = 58/92 (63%), Positives = 74/92 (80%)
 Frame = +3

Query: 312 ATPNASYAAPLEASFGSSFIIRPLAEILRDLNKKVPDQVLLGKPGSSQQKHIPWYQANRM 491
           A PN++Y  PL+    SS I RPLAEILRDLNK+VPD+V+ G  G+ +  +IPWY ANRM
Sbjct: 66  AVPNSNYVVPLDIPPASSCITRPLAEILRDLNKRVPDKVVKGD-GAVEANYIPWYHANRM 124

Query: 492 LSFYAPGWCGEVRDITFSADGKFVTVIYRVTI 587
           LSF+APGWCGE+R++ FSADG+ V+V+YRVTI
Sbjct: 125 LSFFAPGWCGELRNVIFSADGRSVSVVYRVTI 156


>tr|A9NSX2|A9NSX2_PICSI Putative uncharacterized protein OS=Picea
           sitchensis PE=2 SV=1
          Length = 184

 Score =  124 bits (311), Expect = 4e-27
 Identities = 58/92 (63%), Positives = 74/92 (80%)
 Frame = +3

Query: 312 ATPNASYAAPLEASFGSSFIIRPLAEILRDLNKKVPDQVLLGKPGSSQQKHIPWYQANRM 491
           A PN++Y  PL+    SS I RPLAEILRDLNK+VPD+V+ G  G+ +  +IPWY ANRM
Sbjct: 66  AVPNSNYVVPLDIPPASSCITRPLAEILRDLNKRVPDKVVKGD-GAVEANYIPWYHANRM 124

Query: 492 LSFYAPGWCGEVRDITFSADGKFVTVIYRVTI 587
           LSF+APGWCGE+R++ FSADG+ V+V+YRVTI
Sbjct: 125 LSFFAPGWCGELRNVIFSADGRSVSVVYRVTI 156


>tr|A9PGP3|A9PGP3_POPTR Putative uncharacterized protein OS=Populus
           trichocarpa PE=2 SV=1
          Length = 223

 Score =  113 bits (283), Expect = 7e-24
 Identities = 54/93 (58%), Positives = 71/93 (76%), Gaps = 3/93 (3%)
 Frame = +3

Query: 318 PNASYAAPLEASFGSSF---IIRPLAEILRDLNKKVPDQVLLGKPGSSQQKHIPWYQANR 488
           PN++Y  PL+ S  S++   I RPL+EILRDLNK++PD ++  KP +S    IPW+ ANR
Sbjct: 80  PNSNYVVPLDNSLASAYTSCITRPLSEILRDLNKRIPDNII--KPPNSSSTLIPWFHANR 137

Query: 489 MLSFYAPGWCGEVRDITFSADGKFVTVIYRVTI 587
           MLSFYAPGWCGE+RD+ F+ +G  VTV+YRVTI
Sbjct: 138 MLSFYAPGWCGEIRDVIFAENGS-VTVVYRVTI 169


>tr|Q9FIJ4|Q9FIJ4_ARATH Gb|AAF26028.1 (At5g47870) (Putative
           uncharacterized protein At5g47870) OS=Arabidopsis
           thaliana GN=At5g47870 PE=2 SV=1
          Length = 199

 Score =  111 bits (277), Expect = 3e-23
 Identities = 54/96 (56%), Positives = 67/96 (69%), Gaps = 4/96 (4%)
 Frame = +3

Query: 312 ATPNASYAAPLEASFGSSFIIRPLAEILRDLNKKVPDQVLLG----KPGSSQQKHIPWYQ 479
           A PN++Y  P++    SS I RPL EILRDLNKK+PD ++         ++    IPWY 
Sbjct: 55  AVPNSNYVVPIDKFSSSSSITRPLIEILRDLNKKIPDNIVKSHDPPSTSAATSGFIPWYH 114

Query: 480 ANRMLSFYAPGWCGEVRDITFSADGKFVTVIYRVTI 587
           ANRMLSFYAPGWCGEVRD+ FS +G  VTV+YR+TI
Sbjct: 115 ANRMLSFYAPGWCGEVRDVIFSENGN-VTVVYRLTI 149


>tr|Q8LAJ6|Q8LAJ6_ARATH Putative uncharacterized protein
           OS=Arabidopsis thaliana PE=2 SV=1
          Length = 199

 Score =  111 bits (277), Expect = 3e-23
 Identities = 54/96 (56%), Positives = 67/96 (69%), Gaps = 4/96 (4%)
 Frame = +3

Query: 312 ATPNASYAAPLEASFGSSFIIRPLAEILRDLNKKVPDQVLLG----KPGSSQQKHIPWYQ 479
           A PN++Y  P++    SS I RPL EILRDLNKK+PD ++         ++    IPWY 
Sbjct: 55  AVPNSNYVVPIDKFSSSSSITRPLIEILRDLNKKIPDNIVKSHDPPSTSAATSGFIPWYH 114

Query: 480 ANRMLSFYAPGWCGEVRDITFSADGKFVTVIYRVTI 587
           ANRMLSFYAPGWCGEVRD+ FS +G  VTV+YR+TI
Sbjct: 115 ANRMLSFYAPGWCGEVRDVIFSENGN-VTVVYRLTI 149


>tr|B7ZZ71|B7ZZ71_MAIZE Putative uncharacterized protein OS=Zea mays
           PE=2 SV=1
          Length = 189

 Score =  103 bits (256), Expect = 9e-21
 Identities = 53/89 (59%), Positives = 65/89 (73%), Gaps = 2/89 (2%)
 Frame = +3

Query: 327 SYAAPLEASFGSSFIIRPLAEILRDLNKKVPDQVLL--GKPGSSQQKHIPWYQANRMLSF 500
           +Y  PL+A+   S I RPL EILRDLNK+VPD ++    +  S+    IPWY ANRMLSF
Sbjct: 50  NYVVPLDAA--PSGITRPLVEILRDLNKRVPDAIVRPSSRRASASDPVIPWYHANRMLSF 107

Query: 501 YAPGWCGEVRDITFSADGKFVTVIYRVTI 587
           YAPGWCGEVRD+ ++  GK VTVIYRVT+
Sbjct: 108 YAPGWCGEVRDVIYTDSGK-VTVIYRVTV 135


>tr|B6ST86|B6ST86_MAIZE SnRK1-interacting protein 1 OS=Zea mays PE=2
           SV=1
          Length = 189

 Score =  103 bits (256), Expect = 9e-21
 Identities = 53/89 (59%), Positives = 65/89 (73%), Gaps = 2/89 (2%)
 Frame = +3

Query: 327 SYAAPLEASFGSSFIIRPLAEILRDLNKKVPDQVLL--GKPGSSQQKHIPWYQANRMLSF 500
           +Y  PL+A+   S I RPL EILRDLNK+VPD ++    +  S+    IPWY ANRMLSF
Sbjct: 50  NYVVPLDAA--PSGITRPLVEILRDLNKRVPDAIVRPSSRRASASDPVIPWYHANRMLSF 107

Query: 501 YAPGWCGEVRDITFSADGKFVTVIYRVTI 587
           YAPGWCGEVRD+ ++  GK VTVIYRVT+
Sbjct: 108 YAPGWCGEVRDVIYTDSGK-VTVIYRVTV 135


>tr|Q851Y4|Q851Y4_ORYSJ Putative uncharacterized protein
           OSJNBa0015N08.17 OS=Oryza sativa subsp. japonica
           GN=OSJNBa0015N08.17 PE=4 SV=1
          Length = 156

 Score =  102 bits (255), Expect = 1e-20
 Identities = 60/134 (44%), Positives = 79/134 (58%), Gaps = 13/134 (9%)
 Frame = +3

Query: 225 PAVCRFSSSTNPYKFSKMMKVNADRSIILATPNASYAAPLEASFGSSFII---------- 374
           P   R S+++ P      + V A R + + T  A    P  A+  S++++          
Sbjct: 12  PVDTRLSAASLP------IVVRARRRVAVVTAAAPERKPAAAASSSNYVVVPLDAAPSGI 65

Query: 375 -RPLAEILRDLNKKVPDQVLLG--KPGSSQQKHIPWYQANRMLSFYAPGWCGEVRDITFS 545
            RPL EILRDLNK+VPD V+    +  S     IPWY ANRMLSFYAPGWCGEVRD+ ++
Sbjct: 66  TRPLVEILRDLNKRVPDTVVRSSRRRASPSDPVIPWYHANRMLSFYAPGWCGEVRDVIYT 125

Query: 546 ADGKFVTVIYRVTI 587
            +GK VTVIYRVT+
Sbjct: 126 DNGK-VTVIYRVTV 138


>tr|Q10AI2|Q10AI2_ORYSJ Os03g0851500 protein OS=Oryza sativa subsp.
           japonica GN=Os03g0851500 PE=4 SV=1
          Length = 192

 Score =  102 bits (255), Expect = 1e-20
 Identities = 60/134 (44%), Positives = 79/134 (58%), Gaps = 13/134 (9%)
 Frame = +3

Query: 225 PAVCRFSSSTNPYKFSKMMKVNADRSIILATPNASYAAPLEASFGSSFII---------- 374
           P   R S+++ P      + V A R + + T  A    P  A+  S++++          
Sbjct: 12  PVDTRLSAASLP------IVVRARRRVAVVTAAAPERKPAAAASSSNYVVVPLDAAPSGI 65

Query: 375 -RPLAEILRDLNKKVPDQVLLG--KPGSSQQKHIPWYQANRMLSFYAPGWCGEVRDITFS 545
            RPL EILRDLNK+VPD V+    +  S     IPWY ANRMLSFYAPGWCGEVRD+ ++
Sbjct: 66  TRPLVEILRDLNKRVPDTVVRSSRRRASPSDPVIPWYHANRMLSFYAPGWCGEVRDVIYT 125

Query: 546 ADGKFVTVIYRVTI 587
            +GK VTVIYRVT+
Sbjct: 126 DNGK-VTVIYRVTV 138