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NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
DK955226
Clone id TST39A01NGRL0022_I12
Library
Length 544
Definition Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0022_I12. 5' end sequence.
Accession
Tissue type prothallia with plantlets
Developmental stage gametophytes with sporophytes
Contig ID
Sequence 
AAGGTGAGGTTCCCGCAGCTATGTCCTCTTCGATGCTCTCTTCTCTCGCCTCTGGTTCTT
CTGTGCGTGTTGGTGATGGTGGGGCTCGTCCATTTTCTCCTTCTGCTTTCGGAAGGTCAC
CATCCGCTCGTTTGGCGCCTCTGATTTTCTCAGAAAGGAGAAATGCGCTTGCATCCACTG
ACCTTGTATTCGGATTGGGGTTCAACAGTACGAAGCCCACCAGACATGGATTGGGATTCC
GTTTTGGGTGCATTAAAGGGGTTGGATTTGAGAAAGCCTTCACAGGGATCAGGCTGGATG
TGCCGACACTGCTATCATTCCGAGGTGACGCAGCTCCATATGGAAACAATTCCGGAAAGC
TGAAATCTACTGAAGCTCGCAGGCAACGCCTGTGCTCAGTGAGAGCCACCGCCTCAGCAG
GCAGCTTGGCAGCTTCGGACCCTGCACCAAAGCCTGCCCCCAAGAAGTTTTTGGGCGTGG
ATGCGATAACTCTTAAGAAGGTGATACCTTTGGGCTTGATGTTCTTCTGCATTCTGTTCA
ATTA
■■Homology search results ■■ -
sp_hit_id O24381
Definition sp|O24381|TLC1_SOLTU Plastidic ATP/ADP-transporter OS=Solanum tuberosum
Align length 51
Score (bit) 53.1
E-value 8.0e-07
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK955226|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0022_I12, 5'
         (544 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|O24381|TLC1_SOLTU Plastidic ATP/ADP-transporter OS=Solanum tu...    53   8e-07
sp|P92935|TLC2_ARATH ADP,ATP carrier protein 2, chloroplastic OS...    45   2e-04
sp|Q39002|TLC1_ARATH ADP,ATP carrier protein 1, chloroplastic OS...    45   3e-04
sp|Q9Z8J2|TLC1_CHLPN ADP,ATP carrier protein 1 OS=Chlamydia pneu...    32   2.0  
sp|Q6P0U9|NUPL2_DANRE Nucleoporin-like 2 OS=Danio rerio GN=nupl2...    32   2.6  
sp|O84068|TLC1_CHLTR ADP,ATP carrier protein 1 OS=Chlamydia trac...    32   2.6  
sp|Q9PKX5|TLC1_CHLMU ADP,ATP carrier protein 1 OS=Chlamydia muri...    32   2.6  
sp|P0C7I6|YS023_HUMAN Coiled-coil domain-containing protein LOC1...    31   3.4  
sp|P28986|VGLC_HHV1K Glycoprotein C OS=Human herpesvirus 1 (stra...    31   3.4  
sp|P10228|VGLC_HHV11 Glycoprotein C OS=Human herpesvirus 1 (stra...    31   3.4  
sp|P34708|TRA1_CAEEL Sex-determining transformer protein 1 OS=Ca...    30   5.8  
sp|Q80V70|MEGF6_MOUSE Multiple epidermal growth factor-like doma...    30   7.6  
sp|Q0CRI5|KMO_ASPTN Kynurenine 3-monooxygenase OS=Aspergillus te...    30   7.6  
sp|Q2UPP1|KMO_ASPOR Kynurenine 3-monooxygenase OS=Aspergillus or...    30   7.6  
sp|A2QPD9|KMO3_ASPNC Kynurenine 3-monooxygenase 3 OS=Aspergillus...    30   7.6  
sp|P34015|CRMB_VARV Soluble TNF receptor II OS=Variola virus GN=...    30   7.6  
sp|P72204|TONB_PASHA Protein tonB OS=Pasteurella haemolytica GN=...    27   7.9  
sp|A2AJT4|SFR18_MOUSE Splicing factor, arginine/serine-rich 18 O...    30   9.9  
sp|Q9P1Y5|K1543_HUMAN Uncharacterized protein KIAA1543 OS=Homo s...    30   9.9  
sp|P11269|GAG_MLVRD Gag polyprotein OS=Radiation murine leukemia...    30   9.9  
sp|A5A6I3|EIF3F_PANTR Eukaryotic translation initiation factor 3...    30   9.9  
sp|O00303|EIF3F_HUMAN Eukaryotic translation initiation factor 3...    30   9.9  
sp|A1DMD5|KMO_NEOFI Kynurenine 3-monooxygenase OS=Neosartorya fi...    30   9.9  
sp|Q5B2N0|KMO_EMENI Kynurenine 3-monooxygenase OS=Emericella nid...    30   9.9  
sp|Q4WN75|KMO_ASPFU Kynurenine 3-monooxygenase OS=Aspergillus fu...    30   9.9  
sp|B0Y7C3|KMO_ASPFC Kynurenine 3-monooxygenase OS=Aspergillus fu...    30   9.9  

>sp|O24381|TLC1_SOLTU Plastidic ATP/ADP-transporter OS=Solanum
           tuberosum PE=2 SV=2
          Length = 631

 Score = 53.1 bits (126), Expect = 8e-07
 Identities = 23/51 (45%), Positives = 31/51 (60%)
 Frame = +3

Query: 390 LCSVRATASAGSLXXXXXXXXXXXXXFLGVDAITLKKVIPLGLMFFCILFN 542
           +C   A A+AG+              F+G++ +TLKK+IPLG MFFCILFN
Sbjct: 77  ICKAEAAAAAGAADGQPLFVEKEQPKFMGIELVTLKKIIPLGAMFFCILFN 127


>sp|P92935|TLC2_ARATH ADP,ATP carrier protein 2, chloroplastic
           OS=Arabidopsis thaliana GN=AATP2 PE=1 SV=2
          Length = 618

 Score = 45.4 bits (106), Expect = 2e-04
 Identities = 24/59 (40%), Positives = 29/59 (49%), Gaps = 2/59 (3%)
 Frame = +3

Query: 372 EARRQRLCSVRATASAGS--LXXXXXXXXXXXXXFLGVDAITLKKVIPLGLMFFCILFN 542
           E  R  +C   A A+ G                   GV+  TLKK++PLGLMFFCILFN
Sbjct: 68  ERSRGFICKAEAAAAGGGNVFDEGDTAAMAVSPKIFGVEVTTLKKIVPLGLMFFCILFN 126


>sp|Q39002|TLC1_ARATH ADP,ATP carrier protein 1, chloroplastic
           OS=Arabidopsis thaliana GN=AATP1 PE=2 SV=2
          Length = 624

 Score = 44.7 bits (104), Expect = 3e-04
 Identities = 19/23 (82%), Positives = 21/23 (91%)
 Frame = +3

Query: 474 GVDAITLKKVIPLGLMFFCILFN 542
           GV+  TLKK+IPLGLMFFCILFN
Sbjct: 107 GVEVATLKKIIPLGLMFFCILFN 129


>sp|Q9Z8J2|TLC1_CHLPN ADP,ATP carrier protein 1 OS=Chlamydia
           pneumoniae GN=tlcA PE=3 SV=1
          Length = 515

 Score = 32.0 bits (71), Expect = 2.0
 Identities = 13/17 (76%), Positives = 15/17 (88%)
 Frame = +3

Query: 492 LKKVIPLGLMFFCILFN 542
           LKKV+P+ LMFFCI FN
Sbjct: 24  LKKVLPMFLMFFCITFN 40


>sp|Q6P0U9|NUPL2_DANRE Nucleoporin-like 2 OS=Danio rerio GN=nupl2
           PE=2 SV=1
          Length = 414

 Score = 31.6 bits (70), Expect = 2.6
 Identities = 21/78 (26%), Positives = 36/78 (46%), Gaps = 1/78 (1%)
 Frame = -1

Query: 487 IASTPKNFLGAGFGAGSEAAKLPAEAVALTEHRRCLRASVDFSFPELFPYGAASPRNDSS 308
           ++S P  F GAGFG+G +++   + A + T+                  +GA++ +  S 
Sbjct: 226 LSSPPAGFGGAGFGSGPQSSSTFSFAQSKTD------------------FGASNTQQASG 267

Query: 307 VGTSSLI-PVKAFSNPTP 257
            G+S+   P   F NP P
Sbjct: 268 FGSSAFAQPSSGFGNPAP 285


>sp|O84068|TLC1_CHLTR ADP,ATP carrier protein 1 OS=Chlamydia
           trachomatis GN=tlcA PE=3 SV=1
          Length = 528

 Score = 31.6 bits (70), Expect = 2.6
 Identities = 13/17 (76%), Positives = 15/17 (88%)
 Frame = +3

Query: 492 LKKVIPLGLMFFCILFN 542
           LKKV+P+ LMFFCI FN
Sbjct: 24  LKKVLPMFLMFFCISFN 40


>sp|Q9PKX5|TLC1_CHLMU ADP,ATP carrier protein 1 OS=Chlamydia
           muridarum GN=tlcA PE=3 SV=1
          Length = 529

 Score = 31.6 bits (70), Expect = 2.6
 Identities = 13/17 (76%), Positives = 15/17 (88%)
 Frame = +3

Query: 492 LKKVIPLGLMFFCILFN 542
           LKKV+P+ LMFFCI FN
Sbjct: 24  LKKVLPMFLMFFCISFN 40


>sp|P0C7I6|YS023_HUMAN Coiled-coil domain-containing protein
           LOC126075 OS=Homo sapiens PE=2 SV=1
          Length = 412

 Score = 31.2 bits (69), Expect = 3.4
 Identities = 19/65 (29%), Positives = 29/65 (44%)
 Frame = +2

Query: 287 DQAGCADTAIIPR*RSSIWKQFRKAEIY*SSQATPVLSESHRLSRQLGSFGPCTKACPQE 466
           + A C +T  IP+  S  WK   + E+      + + S  H L   + S   C+ ACP+ 
Sbjct: 315 ETAACPETEEIPQGASGCWKDDLQKEL------SDIWSAVHVLQNSIDSLTLCSGACPKA 368

Query: 467 VFGRG 481
              RG
Sbjct: 369 SSLRG 373


>sp|P28986|VGLC_HHV1K Glycoprotein C OS=Human herpesvirus 1 (strain
           KOS) GN=GC PE=3 SV=1
          Length = 511

 Score = 31.2 bits (69), Expect = 3.4
 Identities = 23/82 (28%), Positives = 32/82 (39%), Gaps = 4/82 (4%)
 Frame = -1

Query: 466 FLGAGFGAGSEAAK----LPAEAVALTEHRRCLRASVDFSFPELFPYGAASPRNDSSVGT 299
           +LGAG   GSE A     + A AV          +    + PE+ P    +P N +   T
Sbjct: 17  WLGAGVAGGSETASTGPTITAGAVTNASEAPTSGSPGSAASPEVTPTSTPNPNNVTQNKT 76

Query: 298 SSLIPVKAFSNPTPLMHPKRNP 233
           +   P    + P P   PK  P
Sbjct: 77  TPTEPASPPTTPKPTSTPKSPP 98


>sp|P10228|VGLC_HHV11 Glycoprotein C OS=Human herpesvirus 1 (strain
           17) GN=GC PE=3 SV=1
          Length = 511

 Score = 31.2 bits (69), Expect = 3.4
 Identities = 23/82 (28%), Positives = 32/82 (39%), Gaps = 4/82 (4%)
 Frame = -1

Query: 466 FLGAGFGAGSEAAK----LPAEAVALTEHRRCLRASVDFSFPELFPYGAASPRNDSSVGT 299
           +LGAG   GSE A     + A AV          +    + PE+ P    +P N +   T
Sbjct: 17  WLGAGVSGGSETASTGPTITAGAVTNASEAPTSGSPGSAASPEVTPTSTPNPNNVTQNKT 76

Query: 298 SSLIPVKAFSNPTPLMHPKRNP 233
           +   P    + P P   PK  P
Sbjct: 77  TPTEPASPPTTPKPTSTPKSPP 98
tr_hit_id Q59IV2
Definition tr|Q59IV2|Q59IV2_MESCR Putative plastidic adenylate transporter OS=Mesembryanthemum crystallinum
Align length 47
Score (bit) 50.8
E-value 4.0e-05
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK955226|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0022_I12, 5'
         (544 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|Q59IV2|Q59IV2_MESCR Putative plastidic adenylate transporter ...    51   4e-05
tr|A9T5L7|A9T5L7_PHYPA Predicted protein OS=Physcomitrella paten...    48   4e-04
tr|Q6H8E4|Q6H8E4_ORYSJ cDNA, clone: J100090E08, full insert sequ...    47   5e-04
tr|Q5VQU1|Q5VQU1_ORYSJ Putative plastidic ATP/ADP transporter (O...    47   5e-04
tr|Q2TJ67|Q2TJ67_ORYSJ Plastid ATP/ADP transporter OS=Oryza sati...    47   5e-04
tr|Q0IJY1|Q0IJY1_ORYSJ Putative plastidic ATP/ADP transporter OS...    47   5e-04
tr|Q0E2W7|Q0E2W7_ORYSJ Os02g0208100 protein OS=Oryza sativa subs...    47   5e-04
tr|A2ZVZ6|A2ZVZ6_ORYSJ Putative uncharacterized protein OS=Oryza...    47   5e-04
tr|A2X295|A2X295_ORYSI Putative uncharacterized protein OS=Oryza...    47   5e-04
tr|A2WT73|A2WT73_ORYSI Putative uncharacterized protein OS=Oryza...    47   5e-04
tr|Q0ZCE3|Q0ZCE3_POPTR Plastid ATP/ADP-transporter OS=Populus tr...    47   6e-04
tr|B4FPJ4|B4FPJ4_MAIZE Putative uncharacterized protein OS=Zea m...    47   8e-04
tr|Q8MFR8|Q8MFR8_9ROSI Plastidic ATP/ADP transporter (Fragment) ...    46   0.001
tr|B6SVL2|B6SVL2_MAIZE Plastidic ATP/ADP-transporter OS=Zea mays...    46   0.001
tr|A9TN60|A9TN60_PHYPA Predicted protein OS=Physcomitrella paten...    46   0.001
tr|A7P7N6|A7P7N6_VITVI Chromosome chr9 scaffold_7, whole genome ...    46   0.001
tr|A5BVR2|A5BVR2_VITVI Putative uncharacterized protein OS=Vitis...    46   0.001
tr|Q1AK42|Q1AK42_MANES Plastid ATP/ADP transport protein 2 OS=Ma...    45   0.002
tr|Q1AK41|Q1AK41_MANES Plastid ATP/ADP transport protein 2 OS=Ma...    45   0.002
tr|Q5IX09|Q5IX09_PROWI Putative plastidic ATP/ADP-transporter (F...    45   0.003
tr|Q0WW68|Q0WW68_ARATH Adenine nucleotide translocase OS=Arabido...    45   0.003
tr|Q1AK43|Q1AK43_MANES Plastid ATP/ADP transport protein 1 OS=Ma...    44   0.005
tr|A6XGR5|A6XGR5_9CHLO Plastid ATP/ADP transporter (Fragment) OS...    41   0.036
tr|A8JID6|A8JID6_CHLRE Plastidic ADP/ATP translocase OS=Chlamydo...    41   0.046
tr|A8HTX0|A8HTX0_CHLRE Plastidic ADP/ATP translocase OS=Chlamydo...    40   0.079
tr|A3A4D7|A3A4D7_ORYSJ Putative uncharacterized protein OS=Oryza...    40   0.079
tr|B0WB96|B0WB96_CULQU Putative uncharacterized protein OS=Culex...    37   0.89 
tr|Q6NMZ5|Q6NMZ5_ARATH At3g51410 OS=Arabidopsis thaliana PE=2 SV=1     36   1.2  
tr|A3JNS5|A3JNS5_9RHOB Methylenetetrahydrofolate reductase OS=Rh...    35   2.0  
tr|B4JQ80|B4JQ80_DROGR GH13651 OS=Drosophila grimshawi GN=GH1365...    35   2.0  

>tr|Q59IV2|Q59IV2_MESCR Putative plastidic adenylate transporter
           OS=Mesembryanthemum crystallinum GN=ANT1 PE=2 SV=1
          Length = 622

 Score = 50.8 bits (120), Expect = 4e-05
 Identities = 24/47 (51%), Positives = 30/47 (63%)
 Frame = +3

Query: 402 RATASAGSLXXXXXXXXXXXXXFLGVDAITLKKVIPLGLMFFCILFN 542
           RA A+A +              FLG++ +TLKK+IPLGLMFFCILFN
Sbjct: 78  RAEAAAAAADGQPLYGEVQSPKFLGIELVTLKKIIPLGLMFFCILFN 124


>tr|A9T5L7|A9T5L7_PHYPA Predicted protein OS=Physcomitrella patens
           subsp. patens GN=PHYPADRAFT_140664 PE=4 SV=1
          Length = 564

 Score = 47.8 bits (112), Expect = 4e-04
 Identities = 33/74 (44%), Positives = 38/74 (51%)
 Frame = +3

Query: 321 RGDAAPYGNNSGKLKSTEARRQRLCSVRATASAGSLXXXXXXXXXXXXXFLGVDAITLKK 500
           +G+  P G  SG          RL  VRA A+AG                LG++A T KK
Sbjct: 20  KGEQGPLGLGSGV---------RL-PVRAQAAAGGAALPSQPANK----ILGIEATTFKK 65

Query: 501 VIPLGLMFFCILFN 542
           VIPLGLMFFCILFN
Sbjct: 66  VIPLGLMFFCILFN 79


>tr|Q6H8E4|Q6H8E4_ORYSJ cDNA, clone: J100090E08, full insert
           sequence OS=Oryza sativa subsp. japonica GN=OJ1006_A02.6
           PE=2 SV=1
          Length = 630

 Score = 47.4 bits (111), Expect = 5e-04
 Identities = 20/25 (80%), Positives = 23/25 (92%)
 Frame = +3

Query: 468 FLGVDAITLKKVIPLGLMFFCILFN 542
           FLGV+  TLKK++PLGLMFFCILFN
Sbjct: 90  FLGVETKTLKKIVPLGLMFFCILFN 114


>tr|Q5VQU1|Q5VQU1_ORYSJ Putative plastidic ATP/ADP transporter
           (Os01g0647100 protein) OS=Oryza sativa subsp. japonica
           GN=P0038D11.19 PE=4 SV=1
          Length = 642

 Score = 47.4 bits (111), Expect = 5e-04
 Identities = 20/25 (80%), Positives = 23/25 (92%)
 Frame = +3

Query: 468 FLGVDAITLKKVIPLGLMFFCILFN 542
           FLGV+  TLKK++PLGLMFFCILFN
Sbjct: 111 FLGVEVKTLKKIVPLGLMFFCILFN 135


>tr|Q2TJ67|Q2TJ67_ORYSJ Plastid ATP/ADP transporter OS=Oryza sativa
           subsp. japonica PE=4 SV=1
          Length = 644

 Score = 47.4 bits (111), Expect = 5e-04
 Identities = 20/25 (80%), Positives = 23/25 (92%)
 Frame = +3

Query: 468 FLGVDAITLKKVIPLGLMFFCILFN 542
           FLGV+  TLKK++PLGLMFFCILFN
Sbjct: 111 FLGVEVKTLKKIVPLGLMFFCILFN 135


>tr|Q0IJY1|Q0IJY1_ORYSJ Putative plastidic ATP/ADP transporter
           OS=Oryza sativa subsp. japonica PE=2 SV=1
          Length = 642

 Score = 47.4 bits (111), Expect = 5e-04
 Identities = 20/25 (80%), Positives = 23/25 (92%)
 Frame = +3

Query: 468 FLGVDAITLKKVIPLGLMFFCILFN 542
           FLGV+  TLKK++PLGLMFFCILFN
Sbjct: 111 FLGVEVKTLKKIVPLGLMFFCILFN 135


>tr|Q0E2W7|Q0E2W7_ORYSJ Os02g0208100 protein OS=Oryza sativa subsp.
           japonica GN=Os02g0208100 PE=4 SV=1
          Length = 640

 Score = 47.4 bits (111), Expect = 5e-04
 Identities = 20/25 (80%), Positives = 23/25 (92%)
 Frame = +3

Query: 468 FLGVDAITLKKVIPLGLMFFCILFN 542
           FLGV+  TLKK++PLGLMFFCILFN
Sbjct: 90  FLGVETKTLKKIVPLGLMFFCILFN 114


>tr|A2ZVZ6|A2ZVZ6_ORYSJ Putative uncharacterized protein OS=Oryza
           sativa subsp. japonica GN=OsJ_002718 PE=4 SV=1
          Length = 619

 Score = 47.4 bits (111), Expect = 5e-04
 Identities = 20/25 (80%), Positives = 23/25 (92%)
 Frame = +3

Query: 468 FLGVDAITLKKVIPLGLMFFCILFN 542
           FLGV+  TLKK++PLGLMFFCILFN
Sbjct: 88  FLGVEVKTLKKIVPLGLMFFCILFN 112


>tr|A2X295|A2X295_ORYSI Putative uncharacterized protein OS=Oryza
           sativa subsp. indica GN=OsI_06319 PE=4 SV=1
          Length = 630

 Score = 47.4 bits (111), Expect = 5e-04
 Identities = 20/25 (80%), Positives = 23/25 (92%)
 Frame = +3

Query: 468 FLGVDAITLKKVIPLGLMFFCILFN 542
           FLGV+  TLKK++PLGLMFFCILFN
Sbjct: 90  FLGVETKTLKKIVPLGLMFFCILFN 114


>tr|A2WT73|A2WT73_ORYSI Putative uncharacterized protein OS=Oryza
           sativa subsp. indica GN=OsI_03061 PE=4 SV=1
          Length = 642

 Score = 47.4 bits (111), Expect = 5e-04
 Identities = 20/25 (80%), Positives = 23/25 (92%)
 Frame = +3

Query: 468 FLGVDAITLKKVIPLGLMFFCILFN 542
           FLGV+  TLKK++PLGLMFFCILFN
Sbjct: 111 FLGVEVKTLKKIVPLGLMFFCILFN 135