| DK955228 |
| Clone id |
TST39A01NGRL0022_I14 |
| Library |
TST39 |
| Length |
544 |
| Definition |
Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0022_I14. 5' end sequence. |
| Accession |
DK955228 |
| Tissue type |
prothallia with plantlets |
| Developmental stage |
gametophytes with sporophytes |
| Contig ID |
- |
| Sequence |
CTTTGTCTCACTGGTCGAGAAATTTGGTTATGCTGAACACCGCGAGACGTGGGATGCGTA CAATCATCTGCAATATGTAGGAGTAGCACGATGCGGAAACTAGCACTGGCAAAACATGCA TGGCGAAAGTTTTCTGATTACATGCGTTATGATTTCAAGGAAATAGTGTTTCCCTCTGCA ATGCCCGATCCACCTGGCACAGTACAGGAAACTCCAAAGCTCCCTTGGAGAGACTATCTT CTTATATTGAGGGTGGGCACCAGGGTCTATATAAAGAGCTTCAAGAATCCTGATTTTGAT ATCGACGAAGAATTTGATTTAGTCCTAAATTCTGGTAAAGCAAGACCAAAGAAGGAAAAG AAGGCCGGACCTGTGCAGCCATCTACAATTGAAGACCTGGCTGTAGCAGCAAGAGCTGGA TCTGAGCACATTAGACCTGCATTACATCGCGTATACATGACCAAAGTATCAGCATATAAA GATGCCCTCAAAAATTTTGTGGAGGGCTACCAAGAAGGACTTACGGAAGTTTTGAACCCA AAGA |
| ■■Homology search results ■■ |
- |
| Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
| sp_hit_id |
Q86YN6 |
| Definition |
sp|Q86YN6|PRGC2_HUMAN Peroxisome proliferator-activated receptor gamma coactivator 1-beta OS=Homo sapiens |
| Align length |
97 |
| Score (bit) |
34.7 |
| E-value |
0.31 |
| Report |
 |
| TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
| tr_hit_id |
B8LRK6 |
| Definition |
tr|B8LRK6|B8LRK6_PICSI Putative uncharacterized protein OS=Picea sitchensis |
| Align length |
151 |
| Score (bit) |
137.0 |
| E-value |
3.0e-31 |
| Report |
 BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK955228|Adiantum capillus-veneris mRNA, clone: TST39A01NGRL0022_I14, 5' (544 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|B8LRK6|B8LRK6_PICSI Putative uncharacterized protein OS=Picea... 137 3e-31 tr|Q9FFZ3|Q9FFZ3_ARATH Genomic DNA, chromosome 5, P1 clone:MBL20... 132 1e-29 tr|A9SFM5|A9SFM5_PHYPA Predicted protein (Fragment) OS=Physcomit... 129 8e-29 tr|B4FDX5|B4FDX5_MAIZE Putative uncharacterized protein OS=Zea m... 119 8e-26 tr|B7FMT3|B7FMT3_MEDTR Putative uncharacterized protein OS=Medic... 115 1e-24 tr|Q75L19|Q75L19_ORYSJ cDNA, clone: J065093C22, full insert sequ... 109 1e-22 tr|A2XZM1|A2XZM1_ORYSI Putative uncharacterized protein OS=Oryza... 109 1e-22 tr|A5B6S0|A5B6S0_VITVI Putative uncharacterized protein OS=Vitis... 70 1e-10 tr|A3AZ95|A3AZ95_ORYSJ Putative uncharacterized protein OS=Oryza... 56 1e-06 tr|Q014K6|Q014K6_OSTTA Homology to unknown gene OS=Ostreococcus ... 49 2e-04 tr|Q6YZP4|Q6YZP4_ORYSJ Putative uncharacterized protein OSJNBb00... 48 3e-04 tr|A9TXB9|A9TXB9_PHYPA Predicted protein OS=Physcomitrella paten... 36 1.2 tr|A4S0P0|A4S0P0_OSTLU Predicted protein OS=Ostreococcus lucimar... 35 2.0 tr|A6RRN8|A6RRN8_BOTFB Putative uncharacterized protein OS=Botry... 35 2.6 tr|B7VGY6|B7VGY6_VIBSP Putative uncharacterized protein OS=Vibri... 35 3.4 tr|A3XZR4|A3XZR4_9VIBR ATPase involved in DNA repair OS=Vibrio s... 35 3.4 tr|B7ZM40|B7ZM40_HUMAN Putative uncharacterized protein OS=Homo ... 35 3.4 tr|B3KVW0|B3KVW0_HUMAN cDNA FLJ41620 fis, clone CTONG3008831, hi... 35 3.4 tr|A2RUM8|A2RUM8_HUMAN Peroxisome proliferator-activated recepto... 35 3.4 tr|A5L6X3|A5L6X3_9GAMM Putative uncharacterized protein OS=Vibri... 34 4.4 tr|A3UVU1|A3UVU1_VIBSP ATPase involved in DNA repair OS=Vibrio s... 34 4.4 tr|Q82KY6|Q82KY6_STRAW Putative uncharacterized protein OS=Strep... 34 5.8 tr|A9SHG6|A9SHG6_PHYPA Predicted protein (Fragment) OS=Physcomit... 33 7.6 tr|Q7SYJ4|Q7SYJ4_DANRE Zgc:66441 OS=Danio rerio GN=zgc:66441 PE=... 33 9.9 tr|B4W7B5|B4W7B5_9CAUL Transporter, DAACS family OS=Brevundimona... 33 9.9
>tr|B8LRK6|B8LRK6_PICSI Putative uncharacterized protein OS=Picea sitchensis PE=2 SV=1 Length = 175
Score = 137 bits (346), Expect = 3e-31 Identities = 70/151 (46%), Positives = 101/151 (66%), Gaps = 7/151 (4%) Frame = +1
Query: 112 KHAWRKFSDYMRYDFKEIVFPSAMPDPPGTVQETPKLPWRDYLLILRVGTRVYIKSFKNP 291 K WRK S+Y+R+D KEI FPS++PDPP ++ KL W ++ +L+ +R+Y++S+K Sbjct: 5 KQVWRKVSNYVRHDLKEIAFPSSLPDPPH-LKPRRKLTWPEWFEVLKKASRLYVESWKR- 62
Query: 292 DFDIDEEFDLVLNSGKARPKK-------EKKAGPVQPSTIEDLAVAARAGSEHIRPALHR 450 DI ++ D++ G+A P K E +PST+ED+AVAAR G E +RP L R Sbjct: 63 --DISDDIDVL--EGRAPPPKTGNGSKTENGTRDREPSTLEDVAVAARGGMETLRPVLQR 118
Query: 451 VYMTKVSAYKDALKNFVEGYQEGLTEVLNPK 543 +YMT+ +AYKDALKNF+EGYQEG+ E + K Sbjct: 119 IYMTRATAYKDALKNFIEGYQEGIAETMASK 149
>tr|Q9FFZ3|Q9FFZ3_ARATH Genomic DNA, chromosome 5, P1 clone:MBL20 (Putative uncharacterized protein At5g06240) OS=Arabidopsis thaliana GN=At5g06240 PE=2 SV=1 Length = 162
Score = 132 bits (332), Expect = 1e-29 Identities = 71/146 (48%), Positives = 94/146 (64%), Gaps = 2/146 (1%) Frame = +1
Query: 112 KHAWRKFSDYMRYDFKEIVFPSAMPDPPGTVQETPKLPWRDYLLILRVGTRVYIKSFKNP 291 K +RK SDY+ YD KEIV PS++PDPP V+ KL W + L+L+ +R+Y S+ Sbjct: 4 KVVYRKVSDYICYDLKEIVLPSSLPDPPHVVKRR-KLTWHERFLVLKEASRLYAASWVR- 61
Query: 292 DFDIDEEF--DLVLNSGKARPKKEKKAGPVQPSTIEDLAVAARAGSEHIRPALHRVYMTK 465 DI E + G A PKK+ K +PS +EDLAVAAR G E +RPALHR+YMT+ Sbjct: 62 --DIGPELRPNDYKKQGDAEPKKQAKEAENEPSVLEDLAVAARGGMETLRPALHRLYMTR 119
Query: 466 VSAYKDALKNFVEGYQEGLTEVLNPK 543 S YKDAL +F++GY EGL +V+ K Sbjct: 120 ASNYKDALTSFIKGYHEGLQQVMQNK 145
>tr|A9SFM5|A9SFM5_PHYPA Predicted protein (Fragment) OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_18878 PE=4 SV=1 Length = 153
Score = 129 bits (325), Expect = 8e-29 Identities = 65/141 (46%), Positives = 95/141 (67%), Gaps = 2/141 (1%) Frame = +1
Query: 118 AWRKFSDYMRYDFKEIVFPSAMPDPPG--TVQETPKLPWRDYLLILRVGTRVYIKSFKNP 291 AWR Y+++D KEI FPS++PDPP +T KL +DY+ I+R ++ KSF Sbjct: 6 AWRNIKRYVKHDLKEIAFPSSLPDPPHLKAKPKTRKLTIKDYVYIVRTAASLHAKSFTRE 65
Query: 292 DFDIDEEFDLVLNSGKARPKKEKKAGPVQPSTIEDLAVAARAGSEHIRPALHRVYMTKVS 471 ++ L+ + P+ ++ P +PS++E+LA+AARAG EHI+PAL R+YMT+ S Sbjct: 66 GLTKEDWKKAGLDE-QEDPEVAERKEPAEPSSVEELALAARAGVEHIKPALQRIYMTRAS 124
Query: 472 AYKDALKNFVEGYQEGLTEVL 534 AY+DALK+FVEGYQEG+ EV+ Sbjct: 125 AYRDALKSFVEGYQEGVAEVV 145
>tr|B4FDX5|B4FDX5_MAIZE Putative uncharacterized protein OS=Zea mays PE=2 SV=1 Length = 190
Score = 119 bits (299), Expect = 8e-26 Identities = 65/153 (42%), Positives = 91/153 (59%), Gaps = 13/153 (8%) Frame = +1
Query: 124 RKFSDYMRYDFKEIVFPSAMPDPPGTVQETPKLPWRDYLLILRVGTRVYIKS-------- 279 RK DY+RYD KEI FPS++PDPP +++ PKL W + IL+ TR+Y S Sbjct: 8 RKLYDYVRYDLKEIAFPSSLPDPPH-IKKRPKLSWHERWCILKEATRLYGASWVRDIGPE 66
Query: 280 -----FKNPDFDIDEEFDLVLNSGKARPKKEKKAGPVQPSTIEDLAVAARAGSEHIRPAL 444 +K D++E+ + +K K + +P+ +EDLAVAAR G+E ++PAL Sbjct: 67 LRPNDYKKAAEDVEEQSSNGSHPSSGSDRKGKASS--EPTVLEDLAVAARGGAETLKPAL 124
Query: 445 HRVYMTKVSAYKDALKNFVEGYQEGLTEVLNPK 543 R+YM + S Y DA+KNFVE YQEGL + L K Sbjct: 125 RRIYMARASTYTDAMKNFVETYQEGLKDQLQEK 157
>tr|B7FMT3|B7FMT3_MEDTR Putative uncharacterized protein OS=Medicago truncatula PE=2 SV=1 Length = 167
Score = 115 bits (289), Expect = 1e-24 Identities = 62/143 (43%), Positives = 89/143 (62%), Gaps = 3/143 (2%) Frame = +1
Query: 124 RKFSDYMRYDFKEIVFPSAMPDPPGTVQETPKLPWRDYLLILRVGTRVYIKSFKN---PD 294 RK DY+ YD KEI FPS++PDPP +++ PKL W + +L+ TR+Y S+ PD Sbjct: 12 RKLYDYVCYDLKEIAFPSSLPDPPN-IKKRPKLTWEQRIWVLKKATRLYAASWVRDIGPD 70
Query: 295 FDIDEEFDLVLNSGKARPKKEKKAGPVQPSTIEDLAVAARAGSEHIRPALHRVYMTKVSA 474 ++ +N KK K + S +E+LA+AAR G E +RPAL R+YMT+ SA Sbjct: 71 LRPNDYKTDEMNDESNAQKKTAKDKEL--SIVEELAIAARGGMETLRPALQRLYMTRASA 128
Query: 475 YKDALKNFVEGYQEGLTEVLNPK 543 Y+DA+K+F+EGY EG+ +V K Sbjct: 129 YRDAMKSFIEGYLEGVQQVREKK 151
>tr|Q75L19|Q75L19_ORYSJ cDNA, clone: J065093C22, full insert sequence OS=Oryza sativa subsp. japonica GN=OSJNBb0041A22.1 PE=2 SV=1 Length = 167
Score = 109 bits (272), Expect = 1e-22 Identities = 61/140 (43%), Positives = 85/140 (60%), Gaps = 3/140 (2%) Frame = +1
Query: 124 RKFSDYMRYDFKEIVFPSAMPDPPGTVQETPKLPWRDYLLILRVGTRVYIKSFKN---PD 294 RK DY+RYD KEI FPS++PDPP +++ PKL +D IL+ TR+Y S+ PD Sbjct: 10 RKLYDYVRYDLKEIAFPSSLPDPPH-IKKRPKLTLKDKWCILKEATRLYGASWVRDIGPD 68
Query: 295 FDIDEEFDLVLNSGKARPKKEKKAGPVQPSTIEDLAVAARAGSEHIRPALHRVYMTKVSA 474 ++ K P + + G +P+T+EDL A + G+E +PAL R+YM + S Sbjct: 69 LRPND-----YKKVKEEPDIKTEEGSSEPTTVEDLLGALKGGAEKAKPALQRMYMARASN 123
Query: 475 YKDALKNFVEGYQEGLTEVL 534 Y DALKN+VE Y+EGL E L Sbjct: 124 YTDALKNYVESYKEGLKEHL 143
>tr|A2XZM1|A2XZM1_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_18179 PE=4 SV=1 Length = 167
Score = 109 bits (272), Expect = 1e-22 Identities = 61/140 (43%), Positives = 85/140 (60%), Gaps = 3/140 (2%) Frame = +1
Query: 124 RKFSDYMRYDFKEIVFPSAMPDPPGTVQETPKLPWRDYLLILRVGTRVYIKSFKN---PD 294 RK DY+RYD KEI FPS++PDPP +++ PKL +D IL+ TR+Y S+ PD Sbjct: 10 RKLYDYVRYDLKEIAFPSSLPDPPH-IKKRPKLTLKDKWCILKEATRLYGASWVRDIGPD 68
Query: 295 FDIDEEFDLVLNSGKARPKKEKKAGPVQPSTIEDLAVAARAGSEHIRPALHRVYMTKVSA 474 ++ K P + + G +P+T+EDL A + G+E +PAL R+YM + S Sbjct: 69 LRPND-----YKKVKEEPDIKTEEGSSEPTTVEDLLGALKGGAEKAKPALQRMYMARASN 123
Query: 475 YKDALKNFVEGYQEGLTEVL 534 Y DALKN+VE Y+EGL E L Sbjct: 124 YTDALKNYVESYKEGLKEHL 143
>tr|A5B6S0|A5B6S0_VITVI Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_036740 PE=4 SV=1 Length = 237
Score = 69.7 bits (169), Expect = 1e-10 Identities = 30/49 (61%), Positives = 40/49 (81%) Frame = +1
Query: 397 LAVAARAGSEHIRPALHRVYMTKVSAYKDALKNFVEGYQEGLTEVLNPK 543 + VAAR G E +RPAL RVYMT+ SAY+DALK+F+EGYQEG+ +++ K Sbjct: 173 ITVAARGGMETLRPALQRVYMTRASAYRDALKSFIEGYQEGIQQIMEKK 221
Score = 65.5 bits (158), Expect = 2e-09 Identities = 37/104 (35%), Positives = 59/104 (56%), Gaps = 8/104 (7%) Frame = +1
Query: 112 KHAWRKFSDYMRYDFKEIVFPSAMPDPPGTVQETPKLPWRDYLLILRVGTRVYIKSF--- 282 K WRK DY+RYD KEI FPS++PDPP +++ KL W++ +L+ +R+Y S+ Sbjct: 4 KVVWRKVCDYIRYDLKEIAFPSSLPDPP-HIKKRRKLTWQERYYVLKEASRLYAASWVRD 62
Query: 283 -----KNPDFDIDEEFDLVLNSGKARPKKEKKAGPVQPSTIEDL 399 + D+ DEE + ++ K++ +PST+EDL Sbjct: 63 IGPELRPNDYKKDEETEDKPVGARSTTKEK------EPSTLEDL 100
>tr|A3AZ95|A3AZ95_ORYSJ Putative uncharacterized protein OS=Oryza sativa subsp. japonica GN=OsJ_016117 PE=4 SV=1 Length = 111
Score = 55.8 bits (133), Expect = 1e-06 Identities = 26/49 (53%), Positives = 35/49 (71%) Frame = +1
Query: 124 RKFSDYMRYDFKEIVFPSAMPDPPGTVQETPKLPWRDYLLILRVGTRVY 270 RK DY+RYD KEI FPS++PDPP +++ PKL +D IL+ TR+Y Sbjct: 27 RKLYDYVRYDLKEIAFPSSLPDPP-HIKKRPKLTLKDKWCILKEATRLY 74
>tr|Q014K6|Q014K6_OSTTA Homology to unknown gene OS=Ostreococcus tauri GN=Ot07g04000 PE=4 SV=1 Length = 229
Score = 48.9 bits (115), Expect = 2e-04 Identities = 46/179 (25%), Positives = 73/179 (40%), Gaps = 23/179 (12%) Frame = +1
Query: 64 SSAICR-----SSTMRKLALAKHAWRKFSDYMRYDFKEIVFPSAMPDPPGTVQETPKLPW 228 SS CR ST R A+ + + R DF EIV+P M DPP V+E + Sbjct: 7 SSQSCRRPARSQSTPRARGRARAVIERAVRWAREDFPEIVWPRPMDDPPRYVEE--RRAR 64
Query: 229 RDYLLILRVGTRVYIKSF------------------KNPDFDIDEEFDLVLNSGKARPKK 354 R + L + V+ K+F + D + E + S ++ Sbjct: 65 RVHKLTMDEHREVWTKAFGMWRESWANVFRRQNARTASEDAETRETIE-EAPSTSGEERE 123
Query: 355 EKKAGPVQPSTIEDLAVAARAGSEHIRPALHRVYMTKVSAYKDALKNFVEGYQEGLTEV 531 E+ + A RAG +P + +Y T+ AY+D ++ F++ Y+EG EV Sbjct: 124 ERTLDKEGELLAGEAKRAMRAGRAGFKPLVTYLYETRGRAYRDGVREFIQAYREGFKEV 182
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