DK955231 |
Clone id |
TST39A01NGRL0022_I17 |
Library |
TST39 |
Length |
611 |
Definition |
Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0022_I17. 5' end sequence. |
Accession |
DK955231 |
Tissue type |
prothallia with plantlets |
Developmental stage |
gametophytes with sporophytes |
Contig ID |
CL3109Contig1 |
Sequence |
CACATGCCTTAACTTTGTTTTTAATCTCACTTCAAGCTCACAAGTAGAAATGTTTCTGGA ACAAGGTGCATTTACCGAAGAAGGTCCATTGAGTTAATTTTAGTTACTAATGCGGTGGAC ACAGCTCAGCTGAAGTGGCAATCAACCTAAGTGGTGATCAGTATGGGAAAAAAGGGAAAA TGGTTTTCTGGGGTTAAGAATGCATTCAGATCAAGTCCAAAGGACTCAGCCAAGGTCAAG GAGAATGTTTCAGATGAAAACACAGTTCTTGACAGCGAGAATCAAGTGAAGAGCGAGAAG AGTAAGCGAAAGAAGGACAAGCGCAGATGGAGCTTTGGAAAGTCTACGTCAACGGATCTA TCTACGCACGAGTCACGGGCACTGCAACTTGGCACTGCTTCAGAGAAGTATATAAATGAA GCAGACCAGGGTGCGGCAGCATCAACAGGAGTGGCTCATGAATCTGTATGCAGTGCAGCA GCTGCAGGCCACCCATCAGGATCATGGCTGTCAGTGAGCAATGACTCGAGCATTCAAGAC AAGGCAGCCATTAAGATCCAAACAGCTTTTCGAGGTTACCTTGCCCGCCGAGCATTGCGA GCCCTTAGGGG |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q7TSI1 |
Definition |
sp|Q7TSI1|PKHM1_MOUSE Pleckstrin homology domain-containing family M member 1 OS=Mus musculus |
Align length |
56 |
Score (bit) |
33.9 |
E-value |
0.67 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
Q9M3A6 |
Definition |
tr|Q9M3A6|Q9M3A6_ARATH SF16-like protein OS=Arabidopsis thaliana |
Align length |
145 |
Score (bit) |
47.4 |
E-value |
0.0007 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK955231|Adiantum capillus-veneris mRNA, clone: TST39A01NGRL0022_I17, 5' (611 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|Q9M3A6|Q9M3A6_ARATH SF16-like protein OS=Arabidopsis thaliana... 47 7e-04 tr|Q9ASW3|Q9ASW3_ARATH AT3g49260/F2K15_120 (Guard cell associate... 47 7e-04 tr|A7PI86|A7PI86_VITVI Chromosome chr13 scaffold_17, whole genom... 47 7e-04 tr|A5AES9|A5AES9_VITVI Putative uncharacterized protein OS=Vitis... 47 7e-04 tr|A5BBG4|A5BBG4_VITVI Putative uncharacterized protein OS=Vitis... 45 0.003 tr|B4FSY0|B4FSY0_MAIZE Putative uncharacterized protein OS=Zea m... 45 0.004 tr|Q9FT53|Q9FT53_ARATH Putative uncharacterized protein T25B15_6... 44 0.006 tr|Q5QLD5|Q5QLD5_ORYSJ Putative SF16 protein (Os01g0833800 prote... 42 0.028 tr|B8ABP2|B8ABP2_ORYSI Putative uncharacterized protein OS=Oryza... 42 0.028 tr|A2ZZA5|A2ZZA5_ORYSJ Putative uncharacterized protein OS=Oryza... 42 0.028 tr|Q9LYY1|Q9LYY1_ARATH Putative uncharacterized protein F15A17_7... 39 0.18 tr|Q93ZH7|Q93ZH7_ARATH AT5g03040/F15A17_70 OS=Arabidopsis thalia... 39 0.18 tr|Q0WPW7|Q0WPW7_ARATH Putative uncharacterized protein At4g0082... 37 0.69 tr|O23094|O23094_ARATH A_TM018A10.13 protein (AT4g00820 protein)... 37 0.69 tr|Q28ED1|Q28ED1_XENTR Novel protein similar to cell division cy... 36 1.5 tr|B6UEB3|B6UEB3_MAIZE SF16 protein OS=Zea mays PE=2 SV=1 36 1.5 tr|B4HBH5|B4HBH5_DROPE GL13148 OS=Drosophila persimilis GN=GL131... 36 2.0 tr|A9RF75|A9RF75_PHYPA Predicted protein OS=Physcomitrella paten... 35 3.4 tr|B6TXP8|B6TXP8_MAIZE Putative uncharacterized protein OS=Zea m... 35 4.5 tr|B5DKZ0|B5DKZ0_DROPS GA22747 OS=Drosophila pseudoobscura pseud... 34 5.8 tr|Q6BZ18|Q6BZ18_DEBHA DEHA2A05280p OS=Debaryomyces hansenii GN=... 34 5.8 tr|B4JX94|B4JX94_DROGR GH17909 OS=Drosophila grimshawi GN=GH1790... 33 10.0
>tr|Q9M3A6|Q9M3A6_ARATH SF16-like protein OS=Arabidopsis thaliana GN=F2K15.120 PE=4 SV=1 Length = 535
Score = 47.4 bits (111), Expect = 7e-04 Identities = 43/145 (29%), Positives = 65/145 (44%), Gaps = 6/145 (4%) Frame = +1
Query: 163 MGKKGK--WFSGVKN-AFRSSPKDSAKVKENVSDENTVLDSENQVXXXXXXXXXXXXXXX 333 MGKKG WFS VK F+SSPKDS + EN + + + Sbjct: 1 MGKKGSGGWFSTVKKKVFKSSPKDSKR-------ENNIGSNNADIWQQQHDTQEVVSFEH 53
Query: 334 FGKSTSTDLSTHESRALQLGTASEKYINEADQGAAASTGVAHESVCSAAAAGHPSGSW-- 507 F +S ++S H+ + TAS N D+ A + +A + AA A + + Sbjct: 54 FPAESSPEIS-HDVES----TASTPATNVGDRKHAMAVAIATAAAAEAAVAAAQAAAKVV 108
Query: 508 -LSVSNDSSIQDKAAIKIQTAFRGY 579 L+ N + +D AA+ IQ+ +RGY Sbjct: 109 RLAGYNRQTEEDSAAVLIQSHYRGY 133
>tr|Q9ASW3|Q9ASW3_ARATH AT3g49260/F2K15_120 (Guard cell associated protein) (SF16-like protein) OS=Arabidopsis thaliana GN=GCA2 PE=2 SV=1 Length = 471
Score = 47.4 bits (111), Expect = 7e-04 Identities = 43/145 (29%), Positives = 65/145 (44%), Gaps = 6/145 (4%) Frame = +1
Query: 163 MGKKGK--WFSGVKN-AFRSSPKDSAKVKENVSDENTVLDSENQVXXXXXXXXXXXXXXX 333 MGKKG WFS VK F+SSPKDS + EN + + + Sbjct: 1 MGKKGSGGWFSTVKKKVFKSSPKDSKR-------ENNIGSNNADIWQQQHDTQEVVSFEH 53
Query: 334 FGKSTSTDLSTHESRALQLGTASEKYINEADQGAAASTGVAHESVCSAAAAGHPSGSW-- 507 F +S ++S H+ + TAS N D+ A + +A + AA A + + Sbjct: 54 FPAESSPEIS-HDVES----TASTPATNVGDRKHAMAVAIATAAAAEAAVAAAQAAAKVV 108
Query: 508 -LSVSNDSSIQDKAAIKIQTAFRGY 579 L+ N + +D AA+ IQ+ +RGY Sbjct: 109 RLAGYNRQTEEDSAAVLIQSHYRGY 133
>tr|A7PI86|A7PI86_VITVI Chromosome chr13 scaffold_17, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00018236001 PE=4 SV=1 Length = 466
Score = 47.4 bits (111), Expect = 7e-04 Identities = 47/153 (30%), Positives = 64/153 (41%), Gaps = 14/153 (9%) Frame = +1
Query: 163 MGKKGKWFSGVKNAFRSSPKDSAKVKENVSDENTVLDSENQVXXXXXXXXXXXXXXXFGK 342 MGKKG WFS VK A PK+ D+ T + FGK Sbjct: 1 MGKKGNWFSAVKKALSPEPKEK-------KDKTTPKSKKK----------------WFGK 37
Query: 343 STSTD-LSTHESRALQLG-----------TASEKYINEADQGAAASTGVAHESVCSAAAA 486 + D +S+ A+ L T +E ++ A +T VA E+ +AA A Sbjct: 38 HKNLDPVSSSTENAMPLPAPAPPIEDVKLTEAENEQSKHAYSVALATAVAAEAAVAAAHA 97
Query: 487 GHPSGSWLSVSNDS--SIQDKAAIKIQTAFRGY 579 +V+ S S ++ AAIKIQTAFRGY Sbjct: 98 AAEVVRLTTVTRFSGKSKEEVAAIKIQTAFRGY 130
>tr|A5AES9|A5AES9_VITVI Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_018782 PE=4 SV=1 Length = 482
Score = 47.4 bits (111), Expect = 7e-04 Identities = 47/153 (30%), Positives = 64/153 (41%), Gaps = 14/153 (9%) Frame = +1
Query: 163 MGKKGKWFSGVKNAFRSSPKDSAKVKENVSDENTVLDSENQVXXXXXXXXXXXXXXXFGK 342 MGKKG WFS VK A PK+ D+ T + FGK Sbjct: 1 MGKKGNWFSAVKKALSPEPKEK-------KDKTTPKSKKK----------------WFGK 37
Query: 343 STSTD-LSTHESRALQLG-----------TASEKYINEADQGAAASTGVAHESVCSAAAA 486 + D +S+ A+ L T +E ++ A +T VA E+ +AA A Sbjct: 38 HKNLDPVSSSTENAMPLPAPAPPIEDVKLTEAENEQSKHAYSVALATAVAAEAAVAAAHA 97
Query: 487 GHPSGSWLSVSNDS--SIQDKAAIKIQTAFRGY 579 +V+ S S ++ AAIKIQTAFRGY Sbjct: 98 AAEVVRLTTVTRFSGKSKEEVAAIKIQTAFRGY 130
>tr|A5BBG4|A5BBG4_VITVI Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_042862 PE=4 SV=1 Length = 537
Score = 45.4 bits (106), Expect = 0.003 Identities = 43/152 (28%), Positives = 65/152 (42%), Gaps = 13/152 (8%) Frame = +1
Query: 163 MGKKG--KWFSGVKNAFRSSPKDSAKVKENVSDENTVLDSENQVXXXXXXXXXXXXXXXF 336 MGKKG W + VK AFRS KD+ K +++ + + E + F Sbjct: 1 MGKKGGSSWLTAVKRAFRSPXKDNEKKSSRRREDHELEEEEEE-------KKREKRRWIF 53
Query: 337 GKSTSTDLSTH--------ESRALQLGTASEKYINEADQGAAASTGVAHESVCSAA-AAG 489 K T+T +T E++ + T I A+Q A + A + AA A Sbjct: 54 RKPTTTTTTTKSCFKFQECETKMISSTTVPTNPILVAEQRHAIAVAAATAAAAEAAVATA 113
Query: 490 HPSGSWLSVSNDSSI--QDKAAIKIQTAFRGY 579 + + ++ SS + AA+ IQTAFRGY Sbjct: 114 QAAVEIVRLTRPSSFFREHYAAVVIQTAFRGY 145
>tr|B4FSY0|B4FSY0_MAIZE Putative uncharacterized protein OS=Zea mays PE=2 SV=1 Length = 498
Score = 44.7 bits (104), Expect = 0.004 Identities = 44/152 (28%), Positives = 65/152 (42%), Gaps = 13/152 (8%) Frame = +1
Query: 163 MGKKGKWFSGVKNAFRSSPKDSAKVKENVSDENTVL------DSENQVXXXXXXXXXXXX 324 MGK+GKWFS VK F SS D + K +D++ S++ Sbjct: 1 MGKRGKWFSAVKKVFSSSDPDGKEAKAQKADKSKSKRRWPFGKSKHSEPSISTVPGTAPA 60
Query: 325 XXXFGKSTSTDLSTHESRALQ-LGTASEKYINEADQGAAASTGVAHESVCSAAAAGHPSG 501 +T + E + + + T SE+ N+ A ++ VA E+ AA A Sbjct: 61 VAPLPSPPATQPHSLEIKDVNPVETDSEQ--NKHAYSVALASAVAAEAAAVAAQAAAEVV 118
Query: 502 SWLSVSND------SSIQDKAAIKIQTAFRGY 579 +V+ SS ++ AA KIQTAFRGY Sbjct: 119 RLTAVTTAAPKMPVSSREELAATKIQTAFRGY 150
>tr|Q9FT53|Q9FT53_ARATH Putative uncharacterized protein T25B15_60 (Putative uncharacterized protein At3g52290) OS=Arabidopsis thaliana GN=T25B15_60 PE=2 SV=1 Length = 430
Score = 44.3 bits (103), Expect = 0.006 Identities = 46/148 (31%), Positives = 61/148 (41%), Gaps = 9/148 (6%) Frame = +1
Query: 163 MGKKGKWFSGVKNAFRSSPKDSAKVKENVSDENTVLDSENQVXXXXXXXXXXXXXXXFGK 342 MGK WFS VK A PK + K + S + FGK Sbjct: 1 MGKS--WFSAVKKALSPEPKQKKEQKPHKSKK------------------------WFGK 34
Query: 343 STSTDLSTHESRALQLGTASEKYINEADQ-------GAAASTGVAHESVCSAA--AAGHP 495 S D+ T+ A T + + E ++ A +T A E+ +AA AA Sbjct: 35 SKKLDV-TNSGAAYSPRTVKDAKLKEIEEQQSRHAYSVAIATAAAAEAAVAAAQAAAEVV 93
Query: 496 SGSWLSVSNDSSIQDKAAIKIQTAFRGY 579 S LS S+++ AAIKIQTAFRGY Sbjct: 94 RLSALSRFPGKSMEEIAAIKIQTAFRGY 121
>tr|Q5QLD5|Q5QLD5_ORYSJ Putative SF16 protein (Os01g0833800 protein) OS=Oryza sativa subsp. japonica GN=P0460C04.27-1 PE=4 SV=1 Length = 500
Score = 42.0 bits (97), Expect = 0.028 Identities = 48/173 (27%), Positives = 65/173 (37%), Gaps = 34/173 (19%) Frame = +1
Query: 163 MGKKGKWFSGVKNAFRSSPKDSAKVKENVSDENTVLDSENQVXXXXXXXXXXXXXXXFGK 342 MGKKG WFS VK F SS D + K +D++ FGK Sbjct: 1 MGKKGNWFSAVKKVFSSSDPDGREAKIEKADKS-----------------RSRRKWPFGK 43
Query: 343 STSTDLSTHESRALQLGTA----------------------------SEKYINEADQGAA 438 S +D T + A+ TA ++ N+ A Sbjct: 44 SKKSDPWT-STVAVPTSTAPPPQPPPPPPTHPIQPQPEEIKDVKAVETDSEQNKHAYSVA 102
Query: 439 ASTGVAHESVCSAAAAG------HPSGSWLSVSNDSSIQDKAAIKIQTAFRGY 579 ++ VA E+ AA A + + + S SS + AAIKIQTAFRGY Sbjct: 103 LASAVAAEAAAVAAQAAAEVVRLTTATTAVPKSPVSSKDELAAIKIQTAFRGY 155
>tr|B8ABP2|B8ABP2_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_04322 PE=4 SV=1 Length = 500
Score = 42.0 bits (97), Expect = 0.028 Identities = 48/173 (27%), Positives = 65/173 (37%), Gaps = 34/173 (19%) Frame = +1
Query: 163 MGKKGKWFSGVKNAFRSSPKDSAKVKENVSDENTVLDSENQVXXXXXXXXXXXXXXXFGK 342 MGKKG WFS VK F SS D + K +D++ FGK Sbjct: 1 MGKKGNWFSAVKKVFSSSDPDGREAKIEKADKS-----------------RSRRKWPFGK 43
Query: 343 STSTDLSTHESRALQLGTA----------------------------SEKYINEADQGAA 438 S +D T + A+ TA ++ N+ A Sbjct: 44 SKKSDPWT-STVAVPTSTAPPPQPPPPPPTHPIQPQPEEIKDVKAVETDSEQNKHAYSVA 102
Query: 439 ASTGVAHESVCSAAAAG------HPSGSWLSVSNDSSIQDKAAIKIQTAFRGY 579 ++ VA E+ AA A + + + S SS + AAIKIQTAFRGY Sbjct: 103 LASAVAAEAAAVAAQAAAEVVRLTTATTAVPKSPVSSKDELAAIKIQTAFRGY 155
>tr|A2ZZA5|A2ZZA5_ORYSJ Putative uncharacterized protein OS=Oryza sativa subsp. japonica GN=OsJ_003877 PE=4 SV=1 Length = 474
Score = 42.0 bits (97), Expect = 0.028 Identities = 48/173 (27%), Positives = 65/173 (37%), Gaps = 34/173 (19%) Frame = +1
Query: 163 MGKKGKWFSGVKNAFRSSPKDSAKVKENVSDENTVLDSENQVXXXXXXXXXXXXXXXFGK 342 MGKKG WFS VK F SS D + K +D++ FGK Sbjct: 1 MGKKGNWFSAVKKVFSSSDPDGREAKIEKADKS-----------------RSRRKWPFGK 43
Query: 343 STSTDLSTHESRALQLGTA----------------------------SEKYINEADQGAA 438 S +D T + A+ TA ++ N+ A Sbjct: 44 SKKSDPWT-STVAVPTSTAPPPQPPPPPPTHPIQPQPEEIKDVKAVETDSEQNKHAYSVA 102
Query: 439 ASTGVAHESVCSAAAAG------HPSGSWLSVSNDSSIQDKAAIKIQTAFRGY 579 ++ VA E+ AA A + + + S SS + AAIKIQTAFRGY Sbjct: 103 LASAVAAEAAAVAAQAAAEVVRLTTATTAVPKSPVSSKDELAAIKIQTAFRGY 155
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