DK955232
Clone id TST39A01NGRL0022_I18
Library
Length 555
Definition Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0022_I18. 5' end sequence.
Accession
Tissue type prothallia with plantlets
Developmental stage gametophytes with sporophytes
Contig ID -
Sequence
GAGCTTGCTGTTCATGGCGCACGGCATTGCATGCCAGAAGATCGTTGGCTCTTATGTGGG
CACTCCCAGTGACATTTGTTCTTCGAGCAATGCTGGAAACCTTTATAGAGGACAGCTGCC
GCTATTTTCAAAGGCACAGGCTATGGCCAGGGAAAGCCATTGTGGGTATGTCGTACCATC
AATGAATAAAGAGAGCTGCAACTTTTTTACAAAGCAGAAATTCAAGACTCAGAGAGTACC
TGTAAGGTTAGTGGACGGCATGAAAACACAGAATGCACGAAGACTTAACATCGAAGCGGC
TAGAAGGGAGCCCATCTCGCAAGCACAGCGGAATGCCGAGCTCGAAGAGGAGGCAAAGAA
GATTGATCTTGCGCCTCACAAGCTCTTGGAAAGGGGAGAGCCTGGTACCATGCAGGGCAT
CATTAAGGATGTGATTCCAGTAGGCTACTTTATTACTCTTCCTAATGGGAAAGATGGGTA
CCTGCCTGCCCTTGATTTAGGGTTCACAGGGGGCATTATCATTCTAGAGCGCCTTTTCAA
AGTAGGGCAAGAGCT
■■Homology search results ■■ -
sp_hit_id Q3AM38
Definition sp|Q3AM38|PNP_SYNSC Polyribonucleotide nucleotidyltransferase OS=Synechococcus sp. (strain CC9605)
Align length 103
Score (bit) 33.1
E-value 0.93
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK955232|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0022_I18, 5'
(555 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q3AM38|PNP_SYNSC Polyribonucleotide nucleotidyltransferase OS... 33 0.93
sp|Q3AV44|PNP_SYNS9 Polyribonucleotide nucleotidyltransferase OS... 33 0.93
sp|A7H2C7|PNP_CAMJD Polyribonucleotide nucleotidyltransferase OS... 33 0.93
sp|A5GN19|PNP_SYNPW Polyribonucleotide nucleotidyltransferase OS... 33 1.2
sp|Q7VAZ5|PNP_PROMA Polyribonucleotide nucleotidyltransferase OS... 33 1.2
sp|Q5HTK8|PNP_CAMJR Polyribonucleotide nucleotidyltransferase OS... 33 1.2
sp|A1W0N8|PNP_CAMJJ Polyribonucleotide nucleotidyltransferase OS... 33 1.2
sp|A8FMV9|PNP_CAMJ8 Polyribonucleotide nucleotidyltransferase OS... 33 1.2
sp|Q7U515|PNP_SYNPX Polyribonucleotide nucleotidyltransferase OS... 32 1.6
sp|Q0I8D2|PNP_SYNS3 Polyribonucleotide nucleotidyltransferase OS... 32 2.1
sp|A2BSA7|PNP_PROMS Polyribonucleotide nucleotidyltransferase OS... 32 2.1
sp|Q319U4|PNP_PROM9 Polyribonucleotide nucleotidyltransferase OS... 32 2.1
sp|A2BXQ9|PNP_PROM5 Polyribonucleotide nucleotidyltransferase OS... 32 2.1
sp|A8G5Y9|PNP_PROM2 Polyribonucleotide nucleotidyltransferase OS... 32 2.1
sp|Q0P903|PNP_CAMJE Polyribonucleotide nucleotidyltransferase OS... 32 2.1
sp|Q9JZ44|RS1_NEIMB 30S ribosomal protein S1 OS=Neisseria mening... 32 2.7
sp|Q7V0R5|PNP_PROMP Polyribonucleotide nucleotidyltransferase OS... 32 2.7
sp|A3PE40|PNP_PROM0 Polyribonucleotide nucleotidyltransferase OS... 32 2.7
sp|Q9U7E0|ATRX_CAEEL Transcriptional regulator ATRX homolog OS=C... 32 2.7
sp|Q49L08|RPOC2_EUCGG DNA-directed RNA polymerase subunit beta''... 30 6.0
sp|A5GRD7|PNP_SYNR3 Polyribonucleotide nucleotidyltransferase OS... 30 6.0
sp|A8ME99|RL2_CALMQ 50S ribosomal protein L2P OS=Caldivirga maqu... 30 7.9
sp|Q30TH2|PNP_SULDN Polyribonucleotide nucleotidyltransferase OS... 30 7.9
sp|Q46JM7|PNP_PROMT Polyribonucleotide nucleotidyltransferase OS... 30 7.9
sp|A2C412|PNP_PROM1 Polyribonucleotide nucleotidyltransferase OS... 30 7.9
sp|P35557|HXK4_HUMAN Glucokinase OS=Homo sapiens GN=GCK PE=1 SV=1 30 7.9
sp|A6QNX5|K2C78_BOVIN Keratin, type II cytoskeletal 78 OS=Bos ta... 30 8.0

>sp|Q3AM38|PNP_SYNSC Polyribonucleotide nucleotidyltransferase
OS=Synechococcus sp. (strain CC9605) GN=pnp PE=3 SV=1
Length = 721

Score = 33.1 bits (74), Expect = 0.93
Identities = 28/103 (27%), Positives = 47/103 (45%)
Frame = +2

Query: 245 RLVDGMKTQNARRLNIEAARREPISQAQRNAELEEEAKKIDLAPHKLLERGEPGTMQGII 424
R + G+ + +++IE I A + EEA+KI + + GE G I
Sbjct: 583 RTIKGITERTNTKIDIEDGGIVTI--ASHDGAAAEEAQKIIEGLTRKVNEGE--VFSGSI 638

Query: 425 KDVIPVGYFITLPNGKDGYLPALDLGFTGGIIILERLFKVGQE 553
+IP+G F+ + GK+G + L + +E + KVG E
Sbjct: 639 TRIIPIGAFVEILPGKEGMIHISQLS-EARVEKVEDVVKVGDE 680


>sp|Q3AV44|PNP_SYNS9 Polyribonucleotide nucleotidyltransferase
OS=Synechococcus sp. (strain CC9902) GN=pnp PE=3 SV=1
Length = 721

Score = 33.1 bits (74), Expect = 0.93
Identities = 28/103 (27%), Positives = 48/103 (46%)
Frame = +2

Query: 245 RLVDGMKTQNARRLNIEAARREPISQAQRNAELEEEAKKIDLAPHKLLERGEPGTMQGII 424
R + G+ + +++IE + I A + EEA+KI + + GE G I
Sbjct: 583 RTIKGITERTNTKIDIEDSGIVTI--ASHDGAAAEEAQKIIEGLTRKVNEGE--MFSGSI 638

Query: 425 KDVIPVGYFITLPNGKDGYLPALDLGFTGGIIILERLFKVGQE 553
+IP+G F+ + GK+G + L + +E + KVG E
Sbjct: 639 TRIIPIGAFVEILPGKEGMIHISQLS-EARVEKVEDVVKVGDE 680


>sp|A7H2C7|PNP_CAMJD Polyribonucleotide nucleotidyltransferase
OS=Campylobacter jejuni subsp. doylei (strain ATCC
BAA-1458 / RM4099 / 269.97) GN=pnp PE=3 SV=1
Length = 718

Score = 33.1 bits (74), Expect = 0.93
Identities = 21/75 (28%), Positives = 37/75 (49%)
Frame = +2

Query: 260 MKTQNARRLNIEAARREPISQAQRNAELEEEAKKIDLAPHKLLERGEPGTMQGIIKDVIP 439
+K ++ I+AA+ I+ ++ +K D++ +L + QGI+K + P
Sbjct: 615 VKIAGSQNEQIKAAKDYIINITSSQKGTKKGSKDKDISDFELGQE-----FQGIVKKIAP 669

Query: 440 VGYFITLPNGKDGYL 484
G F+ L NG DG L
Sbjct: 670 FGAFVELKNGVDGLL 684


>sp|A5GN19|PNP_SYNPW Polyribonucleotide nucleotidyltransferase
OS=Synechococcus sp. (strain WH7803) GN=pnp PE=3 SV=1
Length = 721

Score = 32.7 bits (73), Expect = 1.2
Identities = 27/103 (26%), Positives = 48/103 (46%)
Frame = +2

Query: 245 RLVDGMKTQNARRLNIEAARREPISQAQRNAELEEEAKKIDLAPHKLLERGEPGTMQGII 424
R + G+ + +++IE + I A + +EA+KI + + GE G I
Sbjct: 583 RTIKGITERTNTKIDIEDSGIVTI--ASHDGAAADEAQKIIEGLTRKVNEGE--VFSGAI 638

Query: 425 KDVIPVGYFITLPNGKDGYLPALDLGFTGGIIILERLFKVGQE 553
+IP+G F+ + GK+G + L + +E + KVG E
Sbjct: 639 TRIIPIGAFVEILPGKEGMIHISQLS-EARVEKVEDVVKVGDE 680


>sp|Q7VAZ5|PNP_PROMA Polyribonucleotide nucleotidyltransferase
OS=Prochlorococcus marinus GN=pnp PE=3 SV=1
Length = 722

Score = 32.7 bits (73), Expect = 1.2
Identities = 29/103 (28%), Positives = 48/103 (46%)
Frame = +2

Query: 245 RLVDGMKTQNARRLNIEAARREPISQAQRNAELEEEAKKIDLAPHKLLERGEPGTMQGII 424
R + G+ + +++IE I A + EEA+KI + + GE T G I
Sbjct: 583 RTIKGITERTNTKIDIEDGGIVTI--ASHDGVAAEEAQKIIEGLTRKVHEGEVFT--GSI 638

Query: 425 KDVIPVGYFITLPNGKDGYLPALDLGFTGGIIILERLFKVGQE 553
+IP+G F+ + GK+G + L + +E + KVG E
Sbjct: 639 TRIIPIGAFVEILPGKEGMIHISQLS-EARVEKVEDVVKVGDE 680


>sp|Q5HTK8|PNP_CAMJR Polyribonucleotide nucleotidyltransferase
OS=Campylobacter jejuni (strain RM1221) GN=pnp PE=3 SV=1
Length = 719

Score = 32.7 bits (73), Expect = 1.2
Identities = 21/75 (28%), Positives = 37/75 (49%)
Frame = +2

Query: 260 MKTQNARRLNIEAARREPISQAQRNAELEEEAKKIDLAPHKLLERGEPGTMQGIIKDVIP 439
+K ++ I+AA+ I+ ++ +K D++ +L + QGI+K + P
Sbjct: 616 VKIAGSQNEQIKAAKDYIINITSSQKGTKKGSKDKDISGFELGQE-----FQGIVKKIAP 670

Query: 440 VGYFITLPNGKDGYL 484
G F+ L NG DG L
Sbjct: 671 FGAFVELKNGVDGLL 685


>sp|A1W0N8|PNP_CAMJJ Polyribonucleotide nucleotidyltransferase
OS=Campylobacter jejuni subsp. jejuni serotype O:23/36
(strain 81-176) GN=pnp PE=3 SV=1
Length = 719

Score = 32.7 bits (73), Expect = 1.2
Identities = 21/75 (28%), Positives = 37/75 (49%)
Frame = +2

Query: 260 MKTQNARRLNIEAARREPISQAQRNAELEEEAKKIDLAPHKLLERGEPGTMQGIIKDVIP 439
+K ++ I+AA+ I+ ++ +K D++ +L + QGI+K + P
Sbjct: 616 VKIAGSQNEQIKAAKDYIINITSSQKGTKKGSKDKDISGFELGQE-----FQGIVKKIAP 670

Query: 440 VGYFITLPNGKDGYL 484
G F+ L NG DG L
Sbjct: 671 FGAFVELKNGVDGLL 685


>sp|A8FMV9|PNP_CAMJ8 Polyribonucleotide nucleotidyltransferase
OS=Campylobacter jejuni subsp. jejuni serotype O:6
(strain 81116 / NCTC 11828) GN=pnp PE=3 SV=1
Length = 719

Score = 32.7 bits (73), Expect = 1.2
Identities = 21/75 (28%), Positives = 37/75 (49%)
Frame = +2

Query: 260 MKTQNARRLNIEAARREPISQAQRNAELEEEAKKIDLAPHKLLERGEPGTMQGIIKDVIP 439
+K ++ I+AA+ I+ ++ +K D++ +L + QGI+K + P
Sbjct: 616 VKIAGSQNEQIKAAKDYIINITSSQKGTKKGSKDKDISGFELGQE-----FQGIVKKIAP 670

Query: 440 VGYFITLPNGKDGYL 484
G F+ L NG DG L
Sbjct: 671 FGAFVELKNGVDGLL 685


>sp|Q7U515|PNP_SYNPX Polyribonucleotide nucleotidyltransferase
OS=Synechococcus sp. (strain WH8102) GN=pnp PE=3 SV=1
Length = 721

Score = 32.3 bits (72), Expect = 1.6
Identities = 27/103 (26%), Positives = 48/103 (46%)
Frame = +2

Query: 245 RLVDGMKTQNARRLNIEAARREPISQAQRNAELEEEAKKIDLAPHKLLERGEPGTMQGII 424
R + G+ + +++IE + I A + +EA+KI + + GE G I
Sbjct: 583 RTIKGITERTNTKIDIEDSGIVTI--ASHDGAAADEAQKIIEGLTRKVNEGE--VFSGSI 638

Query: 425 KDVIPVGYFITLPNGKDGYLPALDLGFTGGIIILERLFKVGQE 553
+IP+G F+ + GK+G + L + +E + KVG E
Sbjct: 639 TRIIPIGAFVEILPGKEGMIHISQLS-EARVEKVEDVVKVGDE 680


>sp|Q0I8D2|PNP_SYNS3 Polyribonucleotide nucleotidyltransferase
OS=Synechococcus sp. (strain CC9311) GN=pnp PE=3 SV=1
Length = 721

Score = 32.0 bits (71), Expect = 2.1
Identities = 24/80 (30%), Positives = 39/80 (48%)
Frame = +2

Query: 314 ISQAQRNAELEEEAKKIDLAPHKLLERGEPGTMQGIIKDVIPVGYFITLPNGKDGYLPAL 493
++ A + EEA+KI + + GE T G I +IP+G F+ + GK+G +
Sbjct: 604 VTIASHDGAAAEEAQKIIEGLTRKVNEGEVFT--GSITRIIPIGAFVEILPGKEGMIHIS 661

Query: 494 DLGFTGGIIILERLFKVGQE 553
L + +E + KVG E
Sbjct: 662 QLS-EARVEKVEDVVKVGDE 680


tr_hit_id B3QSU3
Definition tr|B3QSU3|B3QSU3_CHLT3 Ribosomal protein S1 OS=Chloroherpeton thalassium (strain ATCC 35110 / GB-78)
Align length 99
Score (bit) 39.3
E-value 0.14
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK955232|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0022_I18, 5'
(555 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|B3QSU3|B3QSU3_CHLT3 Ribosomal protein S1 OS=Chloroherpeton th... 39 0.14
tr|A8F7S1|A8F7S1_THELT RNA binding S1 domain protein OS=Thermoto... 39 0.14
tr|Q2RLT1|Q2RLT1_MOOTA Ribonuclease R OS=Moorella thermoacetica ... 38 0.41
tr|B5ERQ6|B5ERQ6_ACIF5 P-type conjugative transfer protein TrbL ... 37 0.54
tr|B5EKP7|B5EKP7_ACIF5 P-type conjugative transfer protein TrbL ... 37 0.54
tr|B7JAY1|B7JAY1_THIFE Conjugal transfer protein trbL, putative ... 37 0.54
tr|Q1MQB8|Q1MQB8_LAWIP Ribosomal protein S1 OS=Lawsonia intracel... 36 1.2
tr|Q2R2W5|Q2R2W5_ORYSJ Retrotransposon protein, putative, unclas... 36 1.2
tr|Q01L49|Q01L49_ORYSA H0502B11.2 protein OS=Oryza sativa GN=H05... 35 2.0
tr|Q95R61|Q95R61_DROME SD04909p OS=Drosophila melanogaster GN=In... 35 3.5
tr|B5CPU6|B5CPU6_9FIRM Putative uncharacterized protein OS=Rumin... 34 4.6
tr|B2EJI0|B2EJI0_9BACT Ribonuclease R OS=bacterium Ellin514 GN=C... 34 4.6
tr|A3YPK7|A3YPK7_CAMJE Polyribonucleotide nucleotidyltransferase... 34 4.6
tr|Q75ID0|Q75ID0_ORYSJ Putative gypsy type transposon protein (R... 34 4.6
tr|Q2QP54|Q2QP54_ORYSJ Elongation factor Ts OS=Oryza sativa subs... 34 4.6
tr|A2ZLC1|A2ZLC1_ORYSI Elongation factor Ts OS=Oryza sativa subs... 34 4.6
tr|B1X3J9|B1X3J9_PAUCH Polyribonucleotide nucleotidyltransferase... 34 4.6
tr|B5YH71|B5YH71_THEYD 30S ribosomal protein S1 OS=Thermodesulfo... 34 6.0
tr|B2RZJ3|B2RZJ3_BORHD SSU ribosomal protein S1P OS=Borrelia her... 34 6.0
tr|A3JBY3|A3JBY3_9ALTE Putative uncharacterized protein OS=Marin... 34 6.0
tr|Q6AVG9|Q6AVG9_ORYSJ Putative uncharacterized protein OSJNBa00... 34 6.0
tr|Q10FK4|Q10FK4_ORYSJ Retrotransposon protein, putative, unclas... 34 6.0
tr|Q01JT4|Q01JT4_ORYSA H0505F09.7 protein (OSIGBa0093K19.1 prote... 34 6.0
tr|A4SGB6|A4SGB6_PROVI SSU ribosomal protein S1P OS=Prosthecochl... 33 7.8
tr|B6Y0Q5|B6Y0Q5_ANATH Ribonuclease R OS=Anaerocellum thermophil... 33 7.8
tr|Q9AUL5|Q9AUL5_ORYSA Putative uncharacterized protein OSJNBa00... 33 7.8
tr|Q94I60|Q94I60_ORYSJ Putative uncharacterized protein OSJNBa00... 33 7.8
tr|Q7XS77|Q7XS77_ORYSJ OSJNBa0020I02.3 protein OS=Oryza sativa s... 33 7.8
tr|Q7XP72|Q7XP72_ORYSJ OSJNBa0019D11.10 protein OS=Oryza sativa ... 33 7.8
tr|Q7XP08|Q7XP08_ORYSJ OSJNBb0013J13.12 protein OS=Oryza sativa ... 33 7.8

>tr|B3QSU3|B3QSU3_CHLT3 Ribosomal protein S1 OS=Chloroherpeton
thalassium (strain ATCC 35110 / GB-78) GN=Ctha_0115 PE=4
SV=1
Length = 616

Score = 39.3 bits (90), Expect = 0.14
Identities = 30/99 (30%), Positives = 47/99 (47%), Gaps = 16/99 (16%)
Frame = +2

Query: 305 REPISQAQRNAELEEEAKKIDLAPHKLL---ERGEP------------GT-MQGIIKDVI 436
R P ++N EL+ + K D+ ++ ++ EP GT +G I +I
Sbjct: 431 RHPSEIVKKNQELDVKVLKFDVKARRIALGHKQIEPDPWSDFENDYAVGTETKGKIAQII 490

Query: 437 PVGYFITLPNGKDGYLPALDLGFTGGIIILERLFKVGQE 553
G + LP+G DG++PA L GG+ + FKVG E
Sbjct: 491 EKGVIVELPSGVDGFVPASHL-LQGGVRDINASFKVGDE 528


>tr|A8F7S1|A8F7S1_THELT RNA binding S1 domain protein OS=Thermotoga
lettingae (strain ATCC BAA-301 / DSM 14385 / TMO)
GN=Tlet_1651 PE=4 SV=1
Length = 539

Score = 39.3 bits (90), Expect = 0.14
Identities = 21/58 (36%), Positives = 33/58 (56%), Gaps = 1/58 (1%)
Frame = +2

Query: 380 KLLERGEPGTM-QGIIKDVIPVGYFITLPNGKDGYLPALDLGFTGGIIILERLFKVGQ 550
K+ ER GT+ QG +K ++P G F+ L G DG + ++ +T L + FK+GQ
Sbjct: 266 KVSERYSVGTVVQGTVKSIMPFGIFLNLEPGLDGLIHISEVFWTSKKADLHKYFKIGQ 323


>tr|Q2RLT1|Q2RLT1_MOOTA Ribonuclease R OS=Moorella thermoacetica
(strain ATCC 39073) GN=Moth_0273 PE=3 SV=1
Length = 770

Score = 37.7 bits (86), Expect = 0.41
Identities = 19/55 (34%), Positives = 31/55 (56%), Gaps = 2/55 (3%)
Frame = +2

Query: 320 QAQRNAELEEEAKK--IDLAPHKLLERGEPGTMQGIIKDVIPVGYFITLPNGKDG 478
QA +L EEA++ +D+ + +ER T G+I V+P G+F+ L N +G
Sbjct: 593 QASEREKLAEEAERESLDMKKVQYMERHVGATFAGVISGVVPYGFFVELENTVEG 647


>tr|B5ERQ6|B5ERQ6_ACIF5 P-type conjugative transfer protein TrbL
OS=Acidithiobacillus ferrooxidans (strain ATCC 53993)
GN=Lferr_1343 PE=3 SV=1
Length = 589

Score = 37.4 bits (85), Expect = 0.54
Identities = 17/46 (36%), Positives = 26/46 (56%)
Frame = +2

Query: 377 HKLLERGEPGTMQGIIKDVIPVGYFITLPNGKDGYLPALDLGFTGG 514
H L +RG GIIK V+ +G+F+TL + ++P + G GG
Sbjct: 71 HVLQKRGHEDLFAGIIKKVVTLGFFLTLLDNSGTWIPDIINGLAGG 116


>tr|B5EKP7|B5EKP7_ACIF5 P-type conjugative transfer protein TrbL
OS=Acidithiobacillus ferrooxidans (strain ATCC 53993)
GN=Lferr_0251 PE=3 SV=1
Length = 563

Score = 37.4 bits (85), Expect = 0.54
Identities = 17/46 (36%), Positives = 26/46 (56%)
Frame = +2

Query: 377 HKLLERGEPGTMQGIIKDVIPVGYFITLPNGKDGYLPALDLGFTGG 514
H L +RG GIIK V+ +G+F+TL + ++P + G GG
Sbjct: 71 HVLQKRGHEDLFAGIIKKVVTLGFFLTLLDNSGTWIPDIINGLAGG 116


>tr|B7JAY1|B7JAY1_THIFE Conjugal transfer protein trbL, putative
OS=Acidithiobacillus ferrooxidans ATCC 23270 GN=AFE_1642
PE=4 SV=1
Length = 589

Score = 37.4 bits (85), Expect = 0.54
Identities = 17/46 (36%), Positives = 26/46 (56%)
Frame = +2

Query: 377 HKLLERGEPGTMQGIIKDVIPVGYFITLPNGKDGYLPALDLGFTGG 514
H L +RG GIIK V+ +G+F+TL + ++P + G GG
Sbjct: 71 HVLQKRGHEDLFAGIIKKVVTLGFFLTLLDNSGTWIPDIINGLAGG 116


>tr|Q1MQB8|Q1MQB8_LAWIP Ribosomal protein S1 OS=Lawsonia
intracellularis (strain PHE/MN1-00) GN=lytB PE=4 SV=1
Length = 574

Score = 36.2 bits (82), Expect = 1.2
Identities = 23/78 (29%), Positives = 43/78 (55%), Gaps = 9/78 (11%)
Frame = +2

Query: 341 LEEEAKKIDLA-------PHKLL-ERGEPGT-MQGIIKDVIPVGYFITLPNGKDGYLPAL 493
++++ K+I L P +L+ E+ GT ++G++K++ G FI + +G DG +
Sbjct: 350 IDQDKKRISLGMKQVKPNPWELVGEKYPEGTILEGVVKNITEFGMFIGIEDGIDGLIHVS 409

Query: 494 DLGFTGGIIILERLFKVG 547
D+ +T + LFKVG
Sbjct: 410 DISWTKKVRHPNELFKVG 427


>tr|Q2R2W5|Q2R2W5_ORYSJ Retrotransposon protein, putative,
unclassified OS=Oryza sativa subsp. japonica
GN=LOC_Os11g34420 PE=4 SV=1
Length = 834

Score = 36.2 bits (82), Expect = 1.2
Identities = 20/44 (45%), Positives = 27/44 (61%)
Frame = +2

Query: 248 LVDGMKTQNARRLNIEAARREPISQAQRNAELEEEAKKIDLAPH 379
L + + + ARR N+E AR E +Q QR AELE AK++D H
Sbjct: 595 LREAAREEQARR-NLEGARAERAAQDQRAAELEARAKELDARAH 637


>tr|Q01L49|Q01L49_ORYSA H0502B11.2 protein OS=Oryza sativa
GN=H0502B11.2 PE=4 SV=1
Length = 744

Score = 35.4 bits (80), Expect = 2.0
Identities = 23/58 (39%), Positives = 31/58 (53%), Gaps = 6/58 (10%)
Frame = +2

Query: 224 KTQRVPVRLVDGM------KTQNARRLNIEAARREPISQAQRNAELEEEAKKIDLAPH 379
K + V RL D + + + ARR N+E AR E + QR AELE AK++D H
Sbjct: 683 KAEAVAQRLADSLFLREAAREEQARR-NLEGARAERATLDQRAAELEARAKELDARAH 739


>tr|Q95R61|Q95R61_DROME SD04909p OS=Drosophila melanogaster
GN=Incenp PE=2 SV=1
Length = 310

Score = 34.7 bits (78), Expect = 3.5
Identities = 27/111 (24%), Positives = 53/111 (47%)
Frame = +2

Query: 62 TPSDICSSSNAGNLYRGQLPLFSKAQAMARESHCGYVVPSMNKESCNFFTKQKFKTQRVP 241
T + S N+G+ +R L ++ + RE + + +E+ K++ + +R+
Sbjct: 92 TSTKTLSRENSGDDFRKGLHNLAEERKKLREQK--HQQAAQQREA-----KERERAERMA 144

Query: 242 VRLVDGMKTQNARRLNIEAARREPISQAQRNAELEEEAKKIDLAPHKLLER 394
+ K Q R+ IE +R+ + + QR +EEA+ + A HK LE+
Sbjct: 145 KLAAERAKKQEERK-RIEERKRQELEELQRKMRQQEEAEALKKAKHKELEQ 194