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NBDC - LSDB Archive
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DK955249
Clone id TST39A01NGRL0022_J11
Library
Length 571
Definition Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0022_J11. 5' end sequence.
Accession
Tissue type prothallia with plantlets
Developmental stage gametophytes with sporophytes
Contig ID
Sequence 
TGGCGAACTTGCTTTCCTGTACCCTCCCTGCAGCAGCGCCTTCCTGTGAGCTAAGGAGCT
CCTTCATCGGCGAGGAATTCAGTCTAAGCACTGCAGAGTTCAAGCCGAGAGCGCAAAATG
GAGGTTTACTGAGGATCGAGTGCAAGGAGTCTAGGATTGGCAAGAAGCCCGTGACTGTCC
TGAAAGGTGTGAGTGTGAACTTGGACAACCAGACCCTCTTTGTAAAGGGTCCCCTTGGAG
AGCTTGAAACGACATACCCGCGTGAAATCAAAGTTGAATGCGATGCCTCTGGCGTCATAA
CCATCTCAAGGGCTCTGGATACTCGACGAGCACGACAAATGCATGGGCTCTTCAGAACTT
TGACCGACAACATGATAGTTGGAGTAAGTCAGGGTTTTGAGAAGAAGCTCCAGCTGATTG
GAGTTGGATATCGTGCTGCACTTGAGAAGACAGACCTGGTCATGAATCTAGGGTTTTCAC
ACCAGGTACGGATTCCAATTCCAGAAGGCATCAAAGTTAAAGTAGAGGAGAACACGAAAG
TTTCTGTGATGGGGAAGGGGACAAAGTGTGC
■■Homology search results ■■ -
sp_hit_id O23049
Definition sp|O23049|RK6_ARATH 50S ribosomal protein L6, chloroplastic OS=Arabidopsis thaliana
Align length 174
Score (bit) 189.0
E-value 1.0e-47
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK955249|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0022_J11, 5'
         (571 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|O23049|RK6_ARATH 50S ribosomal protein L6, chloroplastic OS=A...   189   1e-47
sp|Q2JIL3|RL6_SYNJB 50S ribosomal protein L6 OS=Synechococcus sp...   134   3e-31
sp|Q8YPJ3|RL6_ANASP 50S ribosomal protein L6 OS=Anabaena sp. (st...   129   8e-30
sp|A7HWS6|RL6_PARL1 50S ribosomal protein L6 OS=Parvibaculum lav...   129   1e-29
sp|Q2JQN4|RL6_SYNJA 50S ribosomal protein L6 OS=Synechococcus sp...   129   1e-29
sp|Q3MFA7|RL6_ANAVT 50S ribosomal protein L6 OS=Anabaena variabi...   129   1e-29
sp|B0C1E7|RL6_ACAM1 50S ribosomal protein L6 OS=Acaryochloris ma...   127   4e-29
sp|A5GVX4|RL6_SYNR3 50S ribosomal protein L6 OS=Synechococcus sp...   125   1e-28
sp|O24703|RL6_SYNP6 50S ribosomal protein L6 OS=Synechococcus sp...   125   1e-28
sp|Q31L21|RL6_SYNE7 50S ribosomal protein L6 OS=Synechococcus el...   125   1e-28
sp|Q110C1|RL6_TRIEI 50S ribosomal protein L6 OS=Trichodesmium er...   125   2e-28
sp|A6W5V3|RL6_KINRD 50S ribosomal protein L6 OS=Kineococcus radi...   125   2e-28
sp|Q82DN1|RL6_STRAW 50S ribosomal protein L6 OS=Streptomyces ave...   124   3e-28
sp|Q0S3G1|RL6_RHOSR 50S ribosomal protein L6 OS=Rhodococcus sp. ...   124   3e-28
sp|P51300|RK6_PORPU 50S ribosomal protein L6, chloroplastic OS=P...   124   3e-28
sp|Q8DML8|RL6_THEEB 50S ribosomal protein L6 OS=Thermosynechococ...   124   3e-28
sp|A6TWG7|RL6_ALKMQ 50S ribosomal protein L6 OS=Alkaliphilus met...   124   3e-28
sp|A0ALV3|RL6_LISW6 50S ribosomal protein L6 OS=Listeria welshim...   123   6e-28
sp|Q927M2|RL6_LISIN 50S ribosomal protein L6 OS=Listeria innocua...   123   6e-28
sp|Q73S94|RL6_MYCPA 50S ribosomal protein L6 OS=Mycobacterium pa...   123   7e-28
sp|A0QKZ7|RL6_MYCA1 50S ribosomal protein L6 OS=Mycobacterium av...   123   7e-28
sp|Q8Y444|RL6_LISMO 50S ribosomal protein L6 OS=Listeria monocyt...   123   7e-28
sp|A8M514|RL6_SALAI 50S ribosomal protein L6 OS=Salinispora aren...   122   1e-27
sp|Q8ETW8|RL6_OCEIH 50S ribosomal protein L6 OS=Oceanobacillus i...   122   1e-27
sp|Q71WG1|RL6_LISMF 50S ribosomal protein L6 OS=Listeria monocyt...   122   1e-27
sp|A0T0J3|RK6_PHATR 50S ribosomal protein L6, chloroplastic OS=P...   122   1e-27
sp|P73306|RL6_SYNY3 50S ribosomal protein L6 OS=Synechocystis sp...   122   1e-27
sp|A4FPL0|RL6_SACEN 50S ribosomal protein L6 OS=Saccharopolyspor...   122   1e-27
sp|Q5Z1Q7|RL6_NOCFA 50S ribosomal protein L6 OS=Nocardia farcini...   122   1e-27
sp|B0T2D7|RL6_CAUSK 50S ribosomal protein L6 OS=Caulobacter sp. ...   122   1e-27

>sp|O23049|RK6_ARATH 50S ribosomal protein L6, chloroplastic
           OS=Arabidopsis thaliana GN=RPL6 PE=1 SV=1
          Length = 223

 Score =  189 bits (479), Expect = 1e-47
 Identities = 97/174 (55%), Positives = 132/174 (75%), Gaps = 3/174 (1%)
 Frame = +3

Query: 42  SCELRSSFIGEE--FSLSTAEFKPRAQNGGLLR-IECKESRIGKKPVTVLKGVSVNLDNQ 212
           S + RS+F+G+   F +S+  F   AQ G   + IECKESRIGK+P+ V   V++ L+ Q
Sbjct: 8   SFQPRSAFLGDRNVFKVSSTPF---AQVGYSSKTIECKESRIGKQPIAVPSNVTIALEGQ 64

Query: 213 TLFVKGPLGELETTYPREIKVECDASGVITISRALDTRRARQMHGLFRTLTDNMIVGVSQ 392
            L VKGPLGEL  TYPRE+++  + SG + + + ++TRRA QMHGLFRTLTDNM+VGVS+
Sbjct: 65  DLKVKGPLGELALTYPREVELTKEESGFLRVKKTVETRRANQMHGLFRTLTDNMVVGVSK 124

Query: 393 GFEKKLQLIGVGYRAALEKTDLVMNLGFSHQVRIPIPEGIKVKVEENTKVSVMG 554
           GFEKKL L+GVGYRA ++  +LV+NLGFSH V++ IP+ +KVKVEENT+++V G
Sbjct: 125 GFEKKLILVGVGYRATVDGKELVLNLGFSHPVKMQIPDSLKVKVEENTRITVSG 178


>sp|Q2JIL3|RL6_SYNJB 50S ribosomal protein L6 OS=Synechococcus sp.
           GN=rplF PE=3 SV=1
          Length = 181

 Score =  134 bits (337), Expect = 3e-31
 Identities = 66/135 (48%), Positives = 97/135 (71%)
 Frame = +3

Query: 150 SRIGKKPVTVLKGVSVNLDNQTLFVKGPLGELETTYPREIKVECDASGVITISRALDTRR 329
           SRIG++P+ +   V + +D Q + VKGP G+L  + P  I V+ +A  ++T+SR  D+R 
Sbjct: 2   SRIGRRPIALPAKVEIQIDGQHIAVKGPKGQLSRSLPPLITVQQNAQ-MLTVSRLNDSRP 60

Query: 330 ARQMHGLFRTLTDNMIVGVSQGFEKKLQLIGVGYRAALEKTDLVMNLGFSHQVRIPIPEG 509
           ARQ+HGL RTL  NM+ GVS+GFE++L+L+GVGYRAA++ + LV+N+G+SH V IP P G
Sbjct: 61  ARQLHGLCRTLVANMVDGVSKGFERRLELVGVGYRAAIQGSKLVLNVGYSHPVEIPFPPG 120

Query: 510 IKVKVEENTKVSVMG 554
           I++ VE N  + V G
Sbjct: 121 IQIAVEGNNIIVVSG 135


>sp|Q8YPJ3|RL6_ANASP 50S ribosomal protein L6 OS=Anabaena sp.
           (strain PCC 7120) GN=rplF PE=3 SV=1
          Length = 182

 Score =  129 bits (325), Expect = 8e-30
 Identities = 65/135 (48%), Positives = 92/135 (68%)
 Frame = +3

Query: 150 SRIGKKPVTVLKGVSVNLDNQTLFVKGPLGELETTYPREIKVECDASGVITISRALDTRR 329
           SRIGK+P+TV   V V +D   + VKGP GEL    P  + V  +    + ++R  +TR 
Sbjct: 2   SRIGKRPITVPAKVQVTIDGTKVVVKGPKGELSRELPANVSVSQEGE-TLQVTRRDETRT 60

Query: 330 ARQMHGLFRTLTDNMIVGVSQGFEKKLQLIGVGYRAALEKTDLVMNLGFSHQVRIPIPEG 509
           +RQ+HGL RTL  NM+ GVSQGF+++L++ GVGYRA ++  +LV+N+G+SHQV+I  P+G
Sbjct: 61  SRQLHGLSRTLVANMVEGVSQGFQRRLEIQGVGYRAQVQGRNLVLNMGYSHQVQIEPPDG 120

Query: 510 IKVKVEENTKVSVMG 554
           I+  VE NT V V G
Sbjct: 121 IQFVVENNTNVIVSG 135


>sp|A7HWS6|RL6_PARL1 50S ribosomal protein L6 OS=Parvibaculum
           lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966)
           GN=rplF PE=3 SV=1
          Length = 177

 Score =  129 bits (324), Expect = 1e-29
 Identities = 70/135 (51%), Positives = 91/135 (67%)
 Frame = +3

Query: 150 SRIGKKPVTVLKGVSVNLDNQTLFVKGPLGELETTYPREIKVECDASGVITISRALDTRR 329
           SRIGK PV V KGV+V L+ Q L VKGP GEL+ T   ++ VE   SG+    R  DT+R
Sbjct: 2   SRIGKYPVEVPKGVTVTLNGQDLAVKGPKGELKLTLVDDVTVEQGESGLKVAPRE-DTQR 60

Query: 330 ARQMHGLFRTLTDNMIVGVSQGFEKKLQLIGVGYRAALEKTDLVMNLGFSHQVRIPIPEG 509
           AR M GL RTL  N++ GV+ GF K L++ GVGYRAA++  +L +NLGFSH V  PIPEG
Sbjct: 61  ARAMWGLSRTLVKNIVTGVTDGFTKTLEINGVGYRAAIQGKNLQLNLGFSHDVLYPIPEG 120

Query: 510 IKVKVEENTKVSVMG 554
           I +K  + T++ + G
Sbjct: 121 IDIKCTKPTEIVITG 135


>sp|Q2JQN4|RL6_SYNJA 50S ribosomal protein L6 OS=Synechococcus sp.
           (strain JA-3-3Ab) GN=rplF PE=3 SV=1
          Length = 181

 Score =  129 bits (323), Expect = 1e-29
 Identities = 64/135 (47%), Positives = 92/135 (68%)
 Frame = +3

Query: 150 SRIGKKPVTVLKGVSVNLDNQTLFVKGPLGELETTYPREIKVECDASGVITISRALDTRR 329
           SRIGK+P+ +   V V ++ Q + VKGP GEL  + P  I V  +A   + +SR  ++R 
Sbjct: 2   SRIGKRPIALPAKVEVQIEGQQISVKGPKGELSRSLPPLIAVHQEAQ-TLKVSRVNESRP 60

Query: 330 ARQMHGLFRTLTDNMIVGVSQGFEKKLQLIGVGYRAALEKTDLVMNLGFSHQVRIPIPEG 509
           ARQ+HGL RTL  NM+ GVS+GFE++L+L+GVGYRA+ +   L++N+G+SH V IP P G
Sbjct: 61  ARQLHGLCRTLVANMVDGVSRGFERRLELVGVGYRASTQGNKLILNVGYSHPVEIPFPPG 120

Query: 510 IKVKVEENTKVSVMG 554
           I++ VE N  + V G
Sbjct: 121 IQIAVEGNNVIVVSG 135


>sp|Q3MFA7|RL6_ANAVT 50S ribosomal protein L6 OS=Anabaena variabilis
           (strain ATCC 29413 / PCC 7937) GN=rplF PE=3 SV=1
          Length = 182

 Score =  129 bits (323), Expect = 1e-29
 Identities = 64/135 (47%), Positives = 92/135 (68%)
 Frame = +3

Query: 150 SRIGKKPVTVLKGVSVNLDNQTLFVKGPLGELETTYPREIKVECDASGVITISRALDTRR 329
           SRIGK+P+TV   V V +D   + VKGP GEL    P  + V  +    + ++R  +TR 
Sbjct: 2   SRIGKRPITVPAKVQVTIDGTKVVVKGPKGELSRELPVNVSVSQEGE-TLQVTRRDETRT 60

Query: 330 ARQMHGLFRTLTDNMIVGVSQGFEKKLQLIGVGYRAALEKTDLVMNLGFSHQVRIPIPEG 509
           +RQ+HGL RTL  NM+ GVSQGF+++L++ GVGYRA ++  +L++N+G+SHQV+I  P+G
Sbjct: 61  SRQLHGLSRTLVANMVEGVSQGFQRRLEIQGVGYRAQVQGRNLILNMGYSHQVQIEPPDG 120

Query: 510 IKVKVEENTKVSVMG 554
           I+  VE NT V V G
Sbjct: 121 IQFAVENNTNVIVSG 135


>sp|B0C1E7|RL6_ACAM1 50S ribosomal protein L6 OS=Acaryochloris
           marina (strain MBIC 11017) GN=rplF PE=3 SV=1
          Length = 179

 Score =  127 bits (319), Expect = 4e-29
 Identities = 66/135 (48%), Positives = 92/135 (68%)
 Frame = +3

Query: 150 SRIGKKPVTVLKGVSVNLDNQTLFVKGPLGELETTYPREIKVECDASGVITISRALDTRR 329
           SRIGK P+ +   V+V +  Q + VKGP GEL      E+ +E  A  ++T++R  ++R 
Sbjct: 2   SRIGKVPIPIPDKVNVTIKGQAVTVKGPKGELSREITPEVAIE-QADNLVTVTRRNESRI 60

Query: 330 ARQMHGLFRTLTDNMIVGVSQGFEKKLQLIGVGYRAALEKTDLVMNLGFSHQVRIPIPEG 509
           ARQ HGL RTL  NM+ GVS+GFEKKLQ+ GVGYRA ++  +L++N+G+S+ V I  PEG
Sbjct: 61  ARQRHGLSRTLIANMVEGVSKGFEKKLQIQGVGYRAQVQGRNLILNVGYSNPVTIEPPEG 120

Query: 510 IKVKVEENTKVSVMG 554
           ++V VE NT V V G
Sbjct: 121 VQVAVESNTNVIVSG 135


>sp|A5GVX4|RL6_SYNR3 50S ribosomal protein L6 OS=Synechococcus sp.
           (strain RCC307) GN=rplF PE=3 SV=1
          Length = 179

 Score =  125 bits (315), Expect = 1e-28
 Identities = 66/135 (48%), Positives = 89/135 (65%)
 Frame = +3

Query: 150 SRIGKKPVTVLKGVSVNLDNQTLFVKGPLGELETTYPREIKVECDASGVITISRALDTRR 329
           SRIGK PV + + VSV +   T+ VKGP GELE   P  + V   A   +T+S +  +RR
Sbjct: 2   SRIGKNPVPIPEKVSVEISGLTVKVKGPKGELERVLPDGVSVS-QADNAVTVSPSDTSRR 60

Query: 330 ARQMHGLFRTLTDNMIVGVSQGFEKKLQLIGVGYRAALEKTDLVMNLGFSHQVRIPIPEG 509
           +R+ HGL RTL  NM+ GVS+GF KKL++IGVGYRA ++   LV++ G+SH V +  PEG
Sbjct: 61  SRERHGLCRTLVANMVEGVSKGFSKKLEIIGVGYRAQVKGKKLVVSAGYSHPVEMDAPEG 120

Query: 510 IKVKVEENTKVSVMG 554
           +   VE NT V+V G
Sbjct: 121 VTFAVENNTLVTVSG 135


>sp|O24703|RL6_SYNP6 50S ribosomal protein L6 OS=Synechococcus sp.
           (strain ATCC 27144 / PCC 6301 / SAUG 1402/1) GN=rplF
           PE=3 SV=1
          Length = 179

 Score =  125 bits (314), Expect = 1e-28
 Identities = 66/135 (48%), Positives = 92/135 (68%)
 Frame = +3

Query: 150 SRIGKKPVTVLKGVSVNLDNQTLFVKGPLGELETTYPREIKVECDASGVITISRALDTRR 329
           SRIGK+P+ +   VSV +D + + VKGP GEL    P  + V  +  G I +SRA ++R 
Sbjct: 2   SRIGKRPIPIPAKVSVAIDGRLVSVKGPKGELSRELPSGVVVTQE-DGNIIVSRADESRL 60

Query: 330 ARQMHGLFRTLTDNMIVGVSQGFEKKLQLIGVGYRAALEKTDLVMNLGFSHQVRIPIPEG 509
           ARQ HGL RTL  N++ GV  GF+K+L++IGVGYRA ++ T L++N+G+S+ V+I  PEG
Sbjct: 61  ARQRHGLSRTLVANLVEGVDSGFQKRLEIIGVGYRAQVQGTTLILNVGYSNPVQIEPPEG 120

Query: 510 IKVKVEENTKVSVMG 554
           I+  VE NT V V G
Sbjct: 121 IQFVVENNTNVVVSG 135


>sp|Q31L21|RL6_SYNE7 50S ribosomal protein L6 OS=Synechococcus
           elongatus (strain PCC 7942) GN=rplF PE=3 SV=1
          Length = 179

 Score =  125 bits (314), Expect = 1e-28
 Identities = 66/135 (48%), Positives = 92/135 (68%)
 Frame = +3

Query: 150 SRIGKKPVTVLKGVSVNLDNQTLFVKGPLGELETTYPREIKVECDASGVITISRALDTRR 329
           SRIGK+P+ +   VSV +D + + VKGP GEL    P  + V  +  G I +SRA ++R 
Sbjct: 2   SRIGKRPIPIPAKVSVAIDGRLVSVKGPKGELSRELPSGVVVTQE-DGNIIVSRADESRL 60

Query: 330 ARQMHGLFRTLTDNMIVGVSQGFEKKLQLIGVGYRAALEKTDLVMNLGFSHQVRIPIPEG 509
           ARQ HGL RTL  N++ GV  GF+K+L++IGVGYRA ++ T L++N+G+S+ V+I  PEG
Sbjct: 61  ARQRHGLSRTLVANLVEGVDSGFQKRLEIIGVGYRAQVQGTTLILNVGYSNPVQIEPPEG 120

Query: 510 IKVKVEENTKVSVMG 554
           I+  VE NT V V G
Sbjct: 121 IQFVVENNTNVVVSG 135
tr_hit_id A9SYQ3
Definition tr|A9SYQ3|A9SYQ3_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens
Align length 189
Score (bit) 216.0
E-value 9.0e-55
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK955249|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0022_J11, 5'
         (571 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|A9SYQ3|A9SYQ3_PHYPA Predicted protein OS=Physcomitrella paten...   216   9e-55
tr|A9U246|A9U246_PHYPA Predicted protein OS=Physcomitrella paten...   209   7e-53
tr|A9NKY9|A9NKY9_PICSI Putative uncharacterized protein OS=Picea...   206   1e-51
tr|B6SL57|B6SL57_MAIZE 50S ribosomal protein L6 OS=Zea mays PE=2...   192   1e-47
tr|Q850L8|Q850L8_ORYSJ Os03g0751400 protein OS=Oryza sativa subs...   192   1e-47
tr|A2XM21|A2XM21_ORYSI Putative uncharacterized protein OS=Oryza...   192   1e-47
tr|Q10L93|Q10L93_ORYSJ Os03g0356300 protein OS=Oryza sativa subs...   191   3e-47
tr|A3AI13|A3AI13_ORYSJ Putative uncharacterized protein OS=Oryza...   191   3e-47
tr|A2XGS7|A2XGS7_ORYSI Putative uncharacterized protein OS=Oryza...   191   3e-47
tr|B6SMY4|B6SMY4_MAIZE 50S ribosomal protein L6 OS=Zea mays PE=2...   187   4e-46
tr|B6UCF0|B6UCF0_MAIZE 50S ribosomal protein L6 OS=Zea mays PE=2...   185   1e-45
tr|B6T4J1|B6T4J1_MAIZE 50S ribosomal protein L6 OS=Zea mays PE=2...   184   2e-45
tr|A4S7S5|A4S7S5_OSTLU Plastid ribosomal protein L6 large riboso...   139   8e-32
tr|B7KI01|B7KI01_9CHRO Ribosomal protein L6 OS=Cyanothece sp. PC...   135   2e-30
tr|B4WHF9|B4WHF9_9SYNE Ribosomal protein L6, putative OS=Synecho...   132   1e-29
tr|B3QYD9|B3QYD9_CHLT3 Ribosomal protein L6 OS=Chloroherpeton th...   129   9e-29
tr|A8J503|A8J503_CHLRE Plastid ribosomal protein L6 OS=Chlamydom...   129   9e-29
tr|A0ZG61|A0ZG61_NODSP 50S ribosomal protein L6 OS=Nodularia spu...   129   1e-28
tr|A3IQ18|A3IQ18_9CHRO 50S ribosomal protein L6 OS=Cyanothece sp...   127   4e-28
tr|B1WQS5|B1WQS5_CYAA5 50S ribosomal protein L6 OS=Cyanothece (s...   127   6e-28
tr|B4B3N8|B4B3N8_9CHRO Ribosomal protein L6 OS=Cyanothece sp. PC...   127   6e-28
tr|B1SWD6|B1SWD6_9BACI Ribosomal protein L6 OS=Geobacillus sp. W...   126   7e-28
tr|Q4C157|Q4C157_CROWT 50S ribosomal protein L6 OS=Crocosphaera ...   124   3e-27
tr|B8ELE8|B8ELE8_METSI Ribosomal protein L6 OS=Methylocella silv...   124   4e-27
tr|B4V4Y5|B4V4Y5_9ACTO 50S ribosomal protein L6 OS=Streptomyces ...   124   4e-27
tr|A3WVT5|A3WVT5_9BRAD 50S ribosomal protein L6 OS=Nitrobacter s...   124   4e-27
tr|Q4ENW7|Q4ENW7_LISMO 50S ribosomal protein L6 OS=Listeria mono...   123   8e-27
tr|B8DB23|B8DB23_LISMO 50S ribosomal protein L6 (BL10) OS=Lister...   123   8e-27
tr|B5GX34|B5GX34_STRCL 50S ribosomal protein L6 OS=Streptomyces ...   123   8e-27
tr|B2ITP1|B2ITP1_NOSP7 Ribosomal protein L6 OS=Nostoc punctiform...   122   1e-26

>tr|A9SYQ3|A9SYQ3_PHYPA Predicted protein OS=Physcomitrella patens
           subsp. patens GN=PHYPADRAFT_110132 PE=3 SV=1
          Length = 230

 Score =  216 bits (549), Expect = 9e-55
 Identities = 116/189 (61%), Positives = 147/189 (77%), Gaps = 3/189 (1%)
 Frame = +3

Query: 12  LSCTLPAAAPSCELRSSFIGEEFSLS--TAEFKPRAQNG-GLLRIECKESRIGKKPVTVL 182
           L+C+L A   S  LRSSF GE       ++ ++ + Q G G LRI+ KESRIGK P+ V 
Sbjct: 4   LACSLSAPCSS-SLRSSFQGESLVTGNPSSSYQVQQQQGKGALRIKAKESRIGKAPIPVP 62

Query: 183 KGVSVNLDNQTLFVKGPLGELETTYPREIKVECDASGVITISRALDTRRARQMHGLFRTL 362
           KGV++NL+ Q+L VKGPLGEL  TYPRE+K+  +A  V+T+ RA+++RRARQMHGLFRTL
Sbjct: 63  KGVTINLEGQSLTVKGPLGELARTYPREVKLT-NAGDVLTVERAVESRRARQMHGLFRTL 121

Query: 363 TDNMIVGVSQGFEKKLQLIGVGYRAALEKTDLVMNLGFSHQVRIPIPEGIKVKVEENTKV 542
           TDNM++GVS+GFEK+LQLIGVGYRAA+EK +L +NLGFSHQVR+ IPE I VKVEENT+V
Sbjct: 122 TDNMVIGVSKGFEKRLQLIGVGYRAAVEKDELALNLGFSHQVRMKIPEDITVKVEENTRV 181

Query: 543 SVMGKGTKC 569
            + GK  KC
Sbjct: 182 LISGK-DKC 189


>tr|A9U246|A9U246_PHYPA Predicted protein OS=Physcomitrella patens
           subsp. patens GN=PHYPADRAFT_200465 PE=3 SV=1
          Length = 229

 Score =  209 bits (533), Expect = 7e-53
 Identities = 116/188 (61%), Positives = 141/188 (75%), Gaps = 2/188 (1%)
 Frame = +3

Query: 12  LSCTLPAAAPSCELRSSFIGEEFSLSTAEF--KPRAQNGGLLRIECKESRIGKKPVTVLK 185
           L+C+L A   S  LRSSF GE   +  A    + + Q  G L IE KESRIGK P+ V K
Sbjct: 4   LACSLSAPCSS-SLRSSFQGESLIVDNAGSLCQVQLQGKGALVIEAKESRIGKAPIPVPK 62

Query: 186 GVSVNLDNQTLFVKGPLGELETTYPREIKVECDASGVITISRALDTRRARQMHGLFRTLT 365
           GV+VNLD Q L VKG LGEL  TYPRE+K+  ++  V+ + RA+++RRARQMHGLFRTLT
Sbjct: 63  GVTVNLDGQNLSVKGALGELVRTYPREVKLT-NSGEVLLVERAVESRRARQMHGLFRTLT 121

Query: 366 DNMIVGVSQGFEKKLQLIGVGYRAALEKTDLVMNLGFSHQVRIPIPEGIKVKVEENTKVS 545
           DNM++GVS+GFEK+LQLIGVGYRAA+EK +L +NLGFSHQVR+ IPE I VKVEENT+V 
Sbjct: 122 DNMVIGVSKGFEKRLQLIGVGYRAAVEKDELALNLGFSHQVRMKIPEAITVKVEENTRVI 181

Query: 546 VMGKGTKC 569
           V GK  KC
Sbjct: 182 VSGK-DKC 188


>tr|A9NKY9|A9NKY9_PICSI Putative uncharacterized protein OS=Picea
           sitchensis PE=2 SV=1
          Length = 231

 Score =  206 bits (523), Expect = 1e-51
 Identities = 108/176 (61%), Positives = 130/176 (73%), Gaps = 4/176 (2%)
 Frame = +3

Query: 42  SCELRSSFIGEEFSLSTAEFKPRAQNGGLLR----IECKESRIGKKPVTVLKGVSVNLDN 209
           +C LRS+ +GE+  L  A  +P      L      IECKESRIGKKPV V   V++ L+ 
Sbjct: 12  ACALRSTLLGEDNGLKAARDRPAIAIVKLPSVRPTIECKESRIGKKPVVVPANVNITLEG 71

Query: 210 QTLFVKGPLGELETTYPREIKVECDASGVITISRALDTRRARQMHGLFRTLTDNMIVGVS 389
           Q + V G LGEL  TYP EIKVE D SG I IS+A++TRRA QMHGLFRTLTDNM+VGVS
Sbjct: 72  QHIRVNGLLGELSQTYPNEIKVERDPSGFIKISKAVETRRANQMHGLFRTLTDNMVVGVS 131

Query: 390 QGFEKKLQLIGVGYRAALEKTDLVMNLGFSHQVRIPIPEGIKVKVEENTKVSVMGK 557
           +GFEKKLQL+GVGYRAA+E +DLVMNLGFSH VR+ +P GIKV VE NT ++V G+
Sbjct: 132 KGFEKKLQLVGVGYRAAVEGSDLVMNLGFSHPVRLAVPAGIKVTVEANTSITVSGR 187


>tr|B6SL57|B6SL57_MAIZE 50S ribosomal protein L6 OS=Zea mays PE=2
           SV=1
          Length = 224

 Score =  192 bits (488), Expect = 1e-47
 Identities = 96/172 (55%), Positives = 130/172 (75%), Gaps = 1/172 (0%)
 Frame = +3

Query: 42  SCELRSSFIGEEFSLSTAEFKPRAQNGGLLR-IECKESRIGKKPVTVLKGVSVNLDNQTL 218
           S + RSSF+G+  +   +   P  Q G   + IECKESRIGK+P++V   V++ L+ Q L
Sbjct: 8   SFQPRSSFLGDRNAFKVSTTPPFTQVGFSSKTIECKESRIGKQPISVPSNVTIALEGQDL 67

Query: 219 FVKGPLGELETTYPREIKVECDASGVITISRALDTRRARQMHGLFRTLTDNMIVGVSQGF 398
            VKGPLGEL  TYPRE+++  + SG + + + ++TRRA QMHGLFRTLTDNM+VGVS+GF
Sbjct: 68  KVKGPLGELALTYPREVELLKEDSGFLRVKKTVETRRANQMHGLFRTLTDNMVVGVSKGF 127

Query: 399 EKKLQLIGVGYRAALEKTDLVMNLGFSHQVRIPIPEGIKVKVEENTKVSVMG 554
           EKKL ++GVGYRA +E  +LV+NLGFSH V++ IPE +KVKVEENT+++V G
Sbjct: 128 EKKLIVVGVGYRATVEGKELVLNLGFSHPVKMQIPESLKVKVEENTRITVSG 179


>tr|Q850L8|Q850L8_ORYSJ Os03g0751400 protein OS=Oryza sativa subsp.
           japonica GN=OSJNBa0032E21.12 PE=2 SV=1
          Length = 226

 Score =  192 bits (487), Expect = 1e-47
 Identities = 98/172 (56%), Positives = 126/172 (73%), Gaps = 2/172 (1%)
 Frame = +3

Query: 45  CELRSSFIGEEFSLSTAEFKPRAQNGGLLR--IECKESRIGKKPVTVLKGVSVNLDNQTL 218
           C  R+ F+G+   +        A   G +R  IECKESRIGKKP+ V   V++ L+ Q +
Sbjct: 12  CNSRTGFLGKRQGICLHVIP--AGRVGFVRKTIECKESRIGKKPIEVPSNVTLTLEEQFI 69

Query: 219 FVKGPLGELETTYPREIKVECDASGVITISRALDTRRARQMHGLFRTLTDNMIVGVSQGF 398
             KGPLGEL   YP E+KV  + SG + +S+ ++T+RA QMHGLFRTLTDN+IVGVS+GF
Sbjct: 70  KAKGPLGELSLNYPGEVKVVKEESGKLRVSKTVETKRANQMHGLFRTLTDNIIVGVSKGF 129

Query: 399 EKKLQLIGVGYRAALEKTDLVMNLGFSHQVRIPIPEGIKVKVEENTKVSVMG 554
           +KKLQL+GVGYRAA+E  DLVMNLGFSH VR+ +PEG+KVKVEENT++ V G
Sbjct: 130 DKKLQLVGVGYRAAVEGKDLVMNLGFSHPVRMAVPEGLKVKVEENTRIIVSG 181


>tr|A2XM21|A2XM21_ORYSI Putative uncharacterized protein OS=Oryza
           sativa subsp. indica GN=OsI_13529 PE=3 SV=1
          Length = 226

 Score =  192 bits (487), Expect = 1e-47
 Identities = 98/172 (56%), Positives = 126/172 (73%), Gaps = 2/172 (1%)
 Frame = +3

Query: 45  CELRSSFIGEEFSLSTAEFKPRAQNGGLLR--IECKESRIGKKPVTVLKGVSVNLDNQTL 218
           C  R+ F+G+   +        A   G +R  IECKESRIGKKP+ V   V++ L+ Q +
Sbjct: 12  CNSRTGFLGKRQGICLHVIP--AGRVGFVRKTIECKESRIGKKPIEVPSNVTLTLEEQFI 69

Query: 219 FVKGPLGELETTYPREIKVECDASGVITISRALDTRRARQMHGLFRTLTDNMIVGVSQGF 398
             KGPLGEL   YP E+KV  + SG + +S+ ++T+RA QMHGLFRTLTDN+IVGVS+GF
Sbjct: 70  KAKGPLGELSLNYPGEVKVVKEESGKLRVSKTVETKRANQMHGLFRTLTDNIIVGVSKGF 129

Query: 399 EKKLQLIGVGYRAALEKTDLVMNLGFSHQVRIPIPEGIKVKVEENTKVSVMG 554
           +KKLQL+GVGYRAA+E  DLVMNLGFSH VR+ +PEG+KVKVEENT++ V G
Sbjct: 130 DKKLQLVGVGYRAAVEGKDLVMNLGFSHPVRMAVPEGLKVKVEENTRIIVSG 181


>tr|Q10L93|Q10L93_ORYSJ Os03g0356300 protein OS=Oryza sativa subsp.
           japonica GN=Os03g0356300 PE=2 SV=1
          Length = 226

 Score =  191 bits (484), Expect = 3e-47
 Identities = 98/178 (55%), Positives = 127/178 (71%), Gaps = 2/178 (1%)
 Frame = +3

Query: 27  PAAAPSCELRSSFIGEEFSLSTAEFKPRAQNGGLLR--IECKESRIGKKPVTVLKGVSVN 200
           P+    C  R+ F G+   +        A   G +R  +ECKESRIGKKP+ V   V++ 
Sbjct: 6   PSLHLPCNSRTGFAGKTQGIRLRVIP--AGRVGFVRTTVECKESRIGKKPIEVPSNVTLT 63

Query: 201 LDNQTLFVKGPLGELETTYPREIKVECDASGVITISRALDTRRARQMHGLFRTLTDNMIV 380
           L+ Q +  KGPLGEL   YP E+KV  + SG + +S+ ++T+RA QMHGLFRTLTDN+IV
Sbjct: 64  LEEQFIKAKGPLGELSLNYPGEVKVVKEESGKLRVSKTVETKRANQMHGLFRTLTDNIIV 123

Query: 381 GVSQGFEKKLQLIGVGYRAALEKTDLVMNLGFSHQVRIPIPEGIKVKVEENTKVSVMG 554
           GVS+GF+KKLQL+GVGYRAA+E  DLVMNLGFSH VR+ +PEG+KVKVEENT++ V G
Sbjct: 124 GVSKGFDKKLQLVGVGYRAAVEGKDLVMNLGFSHPVRMAVPEGLKVKVEENTRIIVSG 181


>tr|A3AI13|A3AI13_ORYSJ Putative uncharacterized protein OS=Oryza
           sativa subsp. japonica GN=OsJ_010435 PE=3 SV=1
          Length = 226

 Score =  191 bits (484), Expect = 3e-47
 Identities = 98/178 (55%), Positives = 127/178 (71%), Gaps = 2/178 (1%)
 Frame = +3

Query: 27  PAAAPSCELRSSFIGEEFSLSTAEFKPRAQNGGLLR--IECKESRIGKKPVTVLKGVSVN 200
           P+    C  R+ F G+   +        A   G +R  +ECKESRIGKKP+ V   V++ 
Sbjct: 6   PSLHLPCNSRTGFAGKTQGIRLRVIP--AGRVGFVRTTVECKESRIGKKPIEVPSNVTLT 63

Query: 201 LDNQTLFVKGPLGELETTYPREIKVECDASGVITISRALDTRRARQMHGLFRTLTDNMIV 380
           L+ Q +  KGPLGEL   YP E+KV  + SG + +S+ ++T+RA QMHGLFRTLTDN+IV
Sbjct: 64  LEEQFIKAKGPLGELSLNYPGEVKVVKEESGKLRVSKTVETKRANQMHGLFRTLTDNIIV 123

Query: 381 GVSQGFEKKLQLIGVGYRAALEKTDLVMNLGFSHQVRIPIPEGIKVKVEENTKVSVMG 554
           GVS+GF+KKLQL+GVGYRAA+E  DLVMNLGFSH VR+ +PEG+KVKVEENT++ V G
Sbjct: 124 GVSKGFDKKLQLVGVGYRAAVEGKDLVMNLGFSHPVRMAVPEGLKVKVEENTRIIVSG 181


>tr|A2XGS7|A2XGS7_ORYSI Putative uncharacterized protein OS=Oryza
           sativa subsp. indica GN=OsI_11607 PE=3 SV=1
          Length = 226

 Score =  191 bits (484), Expect = 3e-47
 Identities = 98/178 (55%), Positives = 127/178 (71%), Gaps = 2/178 (1%)
 Frame = +3

Query: 27  PAAAPSCELRSSFIGEEFSLSTAEFKPRAQNGGLLR--IECKESRIGKKPVTVLKGVSVN 200
           P+    C  R+ F G+   +        A   G +R  +ECKESRIGKKP+ V   V++ 
Sbjct: 6   PSLHLPCNSRTGFAGKTQGIRLRVIP--AGRVGFVRTTVECKESRIGKKPIEVPSNVTLT 63

Query: 201 LDNQTLFVKGPLGELETTYPREIKVECDASGVITISRALDTRRARQMHGLFRTLTDNMIV 380
           L+ Q +  KGPLGEL   YP E+KV  + SG + +S+ ++T+RA QMHGLFRTLTDN+IV
Sbjct: 64  LEEQFIKAKGPLGELSLNYPGEVKVVKEESGKLRVSKTVETKRANQMHGLFRTLTDNIIV 123

Query: 381 GVSQGFEKKLQLIGVGYRAALEKTDLVMNLGFSHQVRIPIPEGIKVKVEENTKVSVMG 554
           GVS+GF+KKLQL+GVGYRAA+E  DLVMNLGFSH VR+ +PEG+KVKVEENT++ V G
Sbjct: 124 GVSKGFDKKLQLVGVGYRAAVEGKDLVMNLGFSHPVRMAVPEGLKVKVEENTRIIVSG 181


>tr|B6SMY4|B6SMY4_MAIZE 50S ribosomal protein L6 OS=Zea mays PE=2
           SV=1
          Length = 223

 Score =  187 bits (475), Expect = 4e-46
 Identities = 95/172 (55%), Positives = 130/172 (75%), Gaps = 1/172 (0%)
 Frame = +3

Query: 42  SCELRSSFIGEEFSLSTAEFKPRAQNGGLLR-IECKESRIGKKPVTVLKGVSVNLDNQTL 218
           S + RS+F+G+  ++      P AQ G   + I+CKESRIGK+P+ V   V++ L+ Q L
Sbjct: 8   SFQPRSAFLGDR-NVFKVSATPSAQVGYSRKTIQCKESRIGKQPIAVPTNVTIALEGQDL 66

Query: 219 FVKGPLGELETTYPREIKVECDASGVITISRALDTRRARQMHGLFRTLTDNMIVGVSQGF 398
            VKGPLGEL  TYPRE+++  + +G + + + ++TRRA QMHGLFRTLTDNM+VGVS+GF
Sbjct: 67  KVKGPLGELALTYPREVELIKEDAGFLRVKKTVETRRANQMHGLFRTLTDNMVVGVSKGF 126

Query: 399 EKKLQLIGVGYRAALEKTDLVMNLGFSHQVRIPIPEGIKVKVEENTKVSVMG 554
           EKKL L+GVGYRA +E  +LV+NLGFSH V++ IPE +KVKVEENT+++V G
Sbjct: 127 EKKLILVGVGYRATVEGKELVLNLGFSHPVKMQIPESLKVKVEENTRITVSG 178