DK955252
Clone id TST39A01NGRL0022_J14
Library
Length 283
Definition Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0022_J14. 5' end sequence.
Accession
Tissue type prothallia with plantlets
Developmental stage gametophytes with sporophytes
Contig ID -
Sequence
TGTGGATGGTCTATTCCGAATGCTGGTAGCAATCCGCGTAGACTTTCTTGATGCCCTCTG
TCATGTGTGAGTTTGACATTTAAATCATCAAATGCGTATGCATTGAGAACGGCTTATGTA
CACTGACGAGCTTCCTGAACCTGATGCTTTGTAAAACTTGCTGTGGGTGTCTGAGGAAGT
TTGAAAACTCGGAGCTTTGTATCAACTATAAACTTGTATACTTTTTTGTATTGGAAATAT
ATCTTGCGAATGGTGTGCCGTTCAAAAAAAAAAAAAAAAAAAA
■■Homology search results ■■ -
sp_hit_id P24915
Definition sp|P24915|VG12_SHV21 Uncharacterized gene 12 protein OS=Saimiriine herpesvirus 2 (strain 11)
Align length 51
Score (bit) 31.6
E-value 1.3
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK955252|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0022_J14, 5'
(263 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|P24915|VG12_SHV21 Uncharacterized gene 12 protein OS=Saimirii... 32 1.3
sp|O84709|ENGA_CHLTR GTP-binding protein engA OS=Chlamydia trach... 30 5.0
sp|Q3KKZ1|ENGA_CHLTA GTP-binding protein engA OS=Chlamydia trach... 30 5.0
sp|Q01389|BCK1_YEAST Serine/threonine-protein kinase BCK1/SLK1/S... 30 5.0
sp|Q8BHJ6|SERC5_MOUSE Serine incorporator 5 OS=Mus musculus GN=S... 29 6.5
sp|Q8K2I9|FBX18_MOUSE F-box only protein 18 OS=Mus musculus GN=F... 29 8.5

>sp|P24915|VG12_SHV21 Uncharacterized gene 12 protein OS=Saimiriine
herpesvirus 2 (strain 11) GN=12 PE=4 SV=1
Length = 169

Score = 31.6 bits (70), Expect = 1.3
Identities = 18/51 (35%), Positives = 26/51 (50%), Gaps = 1/51 (1%)
Frame = +3

Query: 84 IIKCVCIENGLCTLTSFLNLMLCKTCCGCLRKFENSELCIN-YKLVYFFVL 233
I+ CVC+ LC L L++ C +R +++S LC Y YF VL
Sbjct: 76 IVLCVCVSTLLCILCILLDI------CLTIRLWQSSVLCYEVYNTFYFLVL 120


>sp|O84709|ENGA_CHLTR GTP-binding protein engA OS=Chlamydia
trachomatis GN=engA PE=3 SV=1
Length = 490

Score = 29.6 bits (65), Expect = 5.0
Identities = 21/61 (34%), Positives = 30/61 (49%)
Frame = -2

Query: 238 ISNTKKYTSL*LIQSSEFSNFLRHPQQVLQSIRFRKLVSVHKPFSMHTHLMI*MSNSHMT 59
I+ TK TSL + S RH QV+ R R ++HK + T L+ SNS +T
Sbjct: 398 IATTKLSTSL--VNKVLASAMQRHHPQVINGKRLRIYYAIHKTTTPFTFLLFINSNSLLT 455

Query: 58 E 56
+
Sbjct: 456 K 456


>sp|Q3KKZ1|ENGA_CHLTA GTP-binding protein engA OS=Chlamydia
trachomatis (strain A/HAR-13 / ATCC VR-571B) GN=engA
PE=3 SV=1
Length = 490

Score = 29.6 bits (65), Expect = 5.0
Identities = 21/61 (34%), Positives = 30/61 (49%)
Frame = -2

Query: 238 ISNTKKYTSL*LIQSSEFSNFLRHPQQVLQSIRFRKLVSVHKPFSMHTHLMI*MSNSHMT 59
I+ TK TSL + S RH QV+ R R ++HK + T L+ SNS +T
Sbjct: 398 IATTKLSTSL--VNKVLASAMQRHHPQVINGKRLRIYYAIHKTTTPFTFLLFINSNSLLT 455

Query: 58 E 56
+
Sbjct: 456 K 456


>sp|Q01389|BCK1_YEAST Serine/threonine-protein kinase
BCK1/SLK1/SSP31 OS=Saccharomyces cerevisiae GN=BCK1 PE=1
SV=1
Length = 1478

Score = 29.6 bits (65), Expect = 5.0
Identities = 18/51 (35%), Positives = 25/51 (49%)
Frame = -1

Query: 179 LPQTPTASFTKHQVQEARQCT*AVLNAYAFDDLNVKLTHDRGHQESLRGLL 27
LPQT TAS+T+ Q + T V N++ KL R ES++ L
Sbjct: 195 LPQTKTASYTRFQQLLKKTMTKNVTNSHIRQKSASKLKSSRSSSESIKSKL 245


>sp|Q8BHJ6|SERC5_MOUSE Serine incorporator 5 OS=Mus musculus
GN=Serinc5 PE=2 SV=1
Length = 461

Score = 29.3 bits (64), Expect = 6.5
Identities = 12/32 (37%), Positives = 17/32 (53%)
Frame = +3

Query: 150 CKTCCGCLRKFENSELCINYKLVYFFVLEIYL 245
C CCGC KF S + +++F+L I L
Sbjct: 19 CSLCCGCCPKFRQSR-TTRFMYLFYFILVIAL 49


>sp|Q8K2I9|FBX18_MOUSE F-box only protein 18 OS=Mus musculus
GN=Fbxo18 PE=2 SV=1
Length = 1042

Score = 28.9 bits (63), Expect = 8.5
Identities = 16/50 (32%), Positives = 29/50 (58%)
Frame = -1

Query: 251 IRKIYFQYKKVYKFIVDTKLRVFKLPQTPTASFTKHQVQEARQCT*AVLN 102
+RK+ ++ Y+ D L++++L + ASF V EA+ CT A++N
Sbjct: 608 MRKLGECKEEAYQMTHDGYLKLWQLSKPLLASFDAIFVDEAQDCTPAIMN 657


tr_hit_id -
Definition No hits.
Align length -
Score (bit) -
E-value -
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK955252|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0022_J14, 5'
(263 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done

***** No hits found ******