DK955259 [AcEST]

DK955259
Clone id	TST39A01NGRL0022_J21
Library	TST39
Length	506
Definition	Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0022_J21. 5' end sequence.
Accession	DK955259
Tissue type	prothallia with plantlets
Developmental stage	gametophytes with sporophytes
Contig ID	CL185Contig1
Sequence	GTACCATCAAGTGTTAGTCATGGCTTCTAAGAAGATAACGTGCATGCTGGTGATAGTGAT GGTGATGCTGGTGGCATACATGAGCAGCGTTGCTAATGCTGAGGTGGAGGAAGTGGGGCG TAAATTAGTGGCTGGGGCAGGGGCAGAAGCAGGTGAGGAGGCCGAGTTGTGGGCCAAGAA AGGTCATTACCCTTACAAGAAAGGGTACAAGAAGGGCGGCTACCACCACAAGAAGGGCGG CGGCTACGGCAAGGGTCCGGGCCACCCTCACTAACTCAAGGCAGCTGCTTCGTCCGAGCG CGTCTTCTGTCCGGTGTGTACGCATCCTCTTTAATTTCCTTGTGTGACGTTTCCCGCGCC GTTAATAATGTATACATTAGGCCTACGTAGTGTCTCACTTCTCATGTATGTTCCAAAGCC CACTCCAAGCTTACTGCAAGCTTTCGAGTTTTCTCAATGGTTGTCAGGCACTTGAGTACT TTCTATATCATATGCTTACTTTTGAC
■■Homology search results ■■	-
Swiss-Prot (release 56.9)	Link to BlastX Result : Swiss-Prot
sp_hit_id	Q7ZZH7
Definition	sp\|Q7ZZH7\|DBF4A_XENLA Protein DBF4 homolog A OS=Xenopus laevis
Align length	76
Score (bit)	29.6
E-value	8.4
Report	BLASTX 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= DK955259\|Adiantum capillus-veneris mRNA, clone: TST39A01NGRL0022_J21, 5' (506 letters) Database: uniprot_sprot.fasta 412,525 sequences; 148,809,765 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value sp\|Q7ZZH7\|DBF4A_XENLA Protein DBF4 homolog A OS=Xenopus laevis G... 30 8.4 >sp\|Q7ZZH7\|DBF4A_XENLA Protein DBF4 homolog A OS=Xenopus laevis GN=dbf4 PE=1 SV=1 Length = 661 Score = 29.6 bits (65), Expect = 8.4 Identities = 17/76 (22%), Positives = 36/76 (47%), Gaps = 2/76 (2%) Frame = -1 Query: 503 KSKHMIKVLKCLTTIEKTRKLAVSLEWALE--HTEVRHYVGLMYTLLTARETSHKEIK 330 + K ++ + +K + K L+ +L W ++ H E +HY+ T L S +K Sbjct: 120 RGKSLVKRAIKEQEILPKNSILSNALNWGVKILHVEEAKHYIEKKKTALQQVRKSQPVVK 179 Query: 329 EDAYTPDRRRARTKQL 282 ++ RR+ + ++L Sbjct: 180 VESKPQTRRKVKPQKL 195
TrEMBL (release 39.9)	Link to BlastX Result : TrEMBL
tr_hit_id	-
Definition	No hits.
Align length	-
Score (bit)	-
E-value	-
Report	BLASTX 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= DK955259\|Adiantum capillus-veneris mRNA, clone: TST39A01NGRL0022_J21, 5' (506 letters) Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters Searching..................................................done *** No hits found ****