DK955267
Clone id TST39A01NGRL0022_K05
Library
Length 300
Definition Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0022_K05. 5' end sequence.
Accession
Tissue type prothallia with plantlets
Developmental stage gametophytes with sporophytes
Contig ID
Sequence
CCCATTATTGCAAGGATGTATCAGGGGGGTGCTGGTCCTGATATGCCCCCTGGTGCATAT
AGCGACGAGGCTGGGCCTGGTGCTTCTTCTGGAGCAGGGCCCAAGATTGAAGAGGTTGAT
TAAGTAAATCTTTAAAATTGGCTTTGGGGCTGATCTTTATGCAGCGAACACTTATATCGC
CGAGGGATGAAGTCCCTGAGAGCCACATCTGACAGCTTTTTGGTTTTGTTTATATCGATT
TTAGTTGGGAAATAATTCAACTTTTTTCCAGCTTCTTAAAAAAAAAAAAAAAAAAAAAAA
■■Homology search results ■■ -
sp_hit_id -
Definition No hits.
Align length -
Score (bit) -
E-value -
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK955267|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0022_K05, 5'
(264 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done

***** No hits found ******


tr_hit_id Q41027
Definition tr|Q41027|Q41027_PEA PsHSC71.0 OS=Pisum sativum
Align length 35
Score (bit) 35.0
E-value 1.9
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK955267|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0022_K05, 5'
(264 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|Q41027|Q41027_PEA PsHSC71.0 OS=Pisum sativum PE=2 SV=1 35 1.9
tr|Q7X9E6|Q7X9E6_PHAVU Heat shock cognate protein 70 (Fragment) ... 33 9.2
tr|Q5QHT2|Q5QHT2_9FABA 70 kDa heat shock cognate protein 3 OS=Vi... 33 9.2
tr|A7PIU7|A7PIU7_VITVI Chromosome chr13 scaffold_17, whole genom... 33 9.2

>tr|Q41027|Q41027_PEA PsHSC71.0 OS=Pisum sativum PE=2 SV=1
Length = 647

Score = 35.0 bits (79), Expect = 1.9
Identities = 19/35 (54%), Positives = 21/35 (60%)
Frame = +3

Query: 3 MYQGGAGPDMPPGAYSDEXXXXXXXXXXXKIEEVD 107
MYQGGAGPDM GA +D+ KIEEVD
Sbjct: 615 MYQGGAGPDM--GAAADDDAPTGGSGAGPKIEEVD 647


>tr|Q7X9E6|Q7X9E6_PHAVU Heat shock cognate protein 70 (Fragment)
OS=Phaseolus vulgaris PE=2 SV=1
Length = 37

Score = 32.7 bits (73), Expect = 9.2
Identities = 18/35 (51%), Positives = 19/35 (54%)
Frame = +3

Query: 3 MYQGGAGPDMPPGAYSDEXXXXXXXXXXXKIEEVD 107
MYQGGAGPDM G D+ KIEEVD
Sbjct: 5 MYQGGAGPDM--GGAMDDDVPAGGSGAGPKIEEVD 37


>tr|Q5QHT2|Q5QHT2_9FABA 70 kDa heat shock cognate protein 3 OS=Vigna
radiata PE=2 SV=1
Length = 650

Score = 32.7 bits (73), Expect = 9.2
Identities = 20/38 (52%), Positives = 20/38 (52%), Gaps = 3/38 (7%)
Frame = +3

Query: 3 MYQGGAGPDM---PPGAYSDEXXXXXXXXXXXKIEEVD 107
MYQGGAGPDM PP DE KIEEVD
Sbjct: 615 MYQGGAGPDMGGAPPA--DDEYTPSGGSGAGPKIEEVD 650


>tr|A7PIU7|A7PIU7_VITVI Chromosome chr13 scaffold_17, whole genome
shotgun sequence OS=Vitis vinifera GN=GSVIVT00018481001
PE=3 SV=1
Length = 650

Score = 32.7 bits (73), Expect = 9.2
Identities = 16/35 (45%), Positives = 17/35 (48%)
Frame = +3

Query: 3 MYQGGAGPDMPPGAYSDEXXXXXXXXXXXKIEEVD 107
MYQG GPD GA D+ KIEEVD
Sbjct: 616 MYQGAGGPDAGAGAMDDDGPSAGGSGAGPKIEEVD 650