DK955276 |
Clone id |
TST39A01NGRL0022_K14 |
Library |
TST39 |
Length |
577 |
Definition |
Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0022_K14. 5' end sequence. |
Accession |
DK955276 |
Tissue type |
prothallia with plantlets |
Developmental stage |
gametophytes with sporophytes |
Contig ID |
CL228Contig1 |
Sequence |
CCGACATCGCCATCGCTGCAGTGCCGGCAAGCTTCCCCCCTCATTCCCTCTGTTCGCAGT CCCGTGATCATGAATCCTGAATATGACTATCTTTTCAAACTTTTGCTGATTGGTGATTCG GGCGTTGGGAAATCTTGCCTTTTGCTTCGGTTTGCTGATGATTCTTATCTGGAAAGCTAC ATCAGCACAATTGGTGTCGACTTTAAAATTCGCACAGTTGAACTTGACAGCAAAACCATC AAGCTACAGATTTGGGACACTGCTGGTCAAGAGCGATTTCGGACAATCACAAGCAGCTAT TATCGGGGAGCTCATGGCATTATTATCGTTTATGACGTTACAGACCAGGAAAGCTTCAAC AATGTAAAGCAGTGGTTGAATGAAATTGATCGTTATGCTAGTGAAAATGTGAACAAACTT TTGGTTGGGAACAAGAGCGATTTGACAGCAAAGAAAGTTGTTGATACACAAACTGCTAAG GCATATGCTGATGAAATTGGCATTCCCTTTCTGGAAACGAGTGCAAAGAATGCGAGTAAT GTGGAGGAAGCATTTATGACCATGGCGGCAGAAATAA |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
P31584 |
Definition |
sp|P31584|YPTV1_VOLCA GTP-binding protein yptV1 OS=Volvox carteri |
Align length |
169 |
Score (bit) |
315.0 |
E-value |
1.0e-85 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A9NKP5 |
Definition |
tr|A9NKP5|A9NKP5_PICSI Putative uncharacterized protein OS=Picea sitchensis |
Align length |
169 |
Score (bit) |
324.0 |
E-value |
2.0e-87 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK955276|Adiantum capillus-veneris mRNA, clone: TST39A01NGRL0022_K14, 5' (577 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|A9NKP5|A9NKP5_PICSI Putative uncharacterized protein OS=Picea... 324 2e-87 tr|A9SLS3|A9SLS3_PHYPA Rab1/RabD-family small GTPase OS=Physcomi... 322 9e-87 tr|A9SMJ7|A9SMJ7_PHYPA Rab1/RabD-family small GTPase OS=Physcomi... 321 2e-86 tr|A9NPH9|A9NPH9_PICSI Putative uncharacterized protein OS=Picea... 315 9e-85 tr|B7FH02|B7FH02_MEDTR Putative uncharacterized protein OS=Medic... 315 1e-84 tr|Q1WK27|Q1WK27_CHLIN YptC1 OS=Chlamydomonas incerta GN=yptC1 P... 315 1e-84 tr|A8JHQ7|A8JHQ7_CHLRE Small rab-related GTPase OS=Chlamydomonas... 315 1e-84 tr|A9PEC2|A9PEC2_POPTR Putative uncharacterized protein OS=Popul... 314 3e-84 tr|A7R0F4|A7R0F4_VITVI Chromosome undetermined scaffold_306, who... 314 3e-84 tr|B4FC26|B4FC26_MAIZE Putative uncharacterized protein OS=Zea m... 313 6e-84 tr|B6RB23|B6RB23_HALDI Ras-related protein Rab-1A OS=Haliotis di... 312 7e-84 tr|Q9SXT5|Q9SXT5_CICAR Rab-type small GTP-binding protein OS=Cic... 312 1e-83 tr|Q949E2|Q949E2_ORYSA Putative GTP-binding protein OS=Oryza sat... 312 1e-83 tr|Q6H8G2|Q6H8G2_ORYSJ cDNA, clone: J100058B03, full insert sequ... 312 1e-83 tr|Q0JQ62|Q0JQ62_ORYSJ cDNA clone:006-208-C02, full insert seque... 312 1e-83 tr|A2WLD6|A2WLD6_ORYSI Putative uncharacterized protein OS=Oryza... 312 1e-83 tr|Q08153|Q08153_PEA GTP-binding protein OS=Pisum sativum PE=2 SV=1 311 1e-83 tr|B4FQY4|B4FQY4_MAIZE Putative uncharacterized protein OS=Zea m... 311 1e-83 tr|A9P8E1|A9P8E1_POPTR Putative uncharacterized protein OS=Popul... 311 1e-83 tr|Q40203|Q40203_LOTJA RAB1C OS=Lotus japonicus GN=rab1C PE=2 SV=1 311 2e-83 tr|Q2A9H3|Q2A9H3_BRAOL GTP-binding protein, putative OS=Brassica... 310 3e-83 tr|Q7ZXF7|Q7ZXF7_XENLA Rab1-prov protein OS=Xenopus laevis GN=ra... 310 4e-83 tr|Q7ZSZ0|Q7ZSZ0_DANRE Novel protein similar to human RAS oncoge... 310 4e-83 tr|Q6GLH0|Q6GLH0_XENTR RAB1A, member RAS oncogene family OS=Xeno... 310 4e-83 tr|Q2A9V7|Q2A9V7_BRAOL GTP-binding protein, putative OS=Brassica... 310 5e-83 tr|B5FZE3|B5FZE3_TAEGU Putative RAB1B member RAS oncogene family... 309 8e-83 tr|B5FZE0|B5FZE0_TAEGU Putative RAB1B member RAS oncogene family... 309 8e-83 tr|Q5SW88|Q5SW88_MOUSE RAB1, member RAS oncogene family OS=Mus m... 309 8e-83 tr|Q0PD67|Q0PD67_MOUSE Rab1A OS=Mus musculus GN=Rab1 PE=2 SV=1 309 8e-83 tr|A7PBQ0|A7PBQ0_VITVI Chromosome chr16 scaffold_10, whole genom... 309 8e-83
>tr|A9NKP5|A9NKP5_PICSI Putative uncharacterized protein OS=Picea sitchensis PE=2 SV=1 Length = 202
Score = 324 bits (830), Expect = 2e-87 Identities = 162/169 (95%), Positives = 166/169 (98%) Frame = +1
Query: 70 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLESYISTIGVDFKIRTVELDSKTIKLQ 249 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLESYISTIGVDFKIRTVELD KTIKLQ Sbjct: 1 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLESYISTIGVDFKIRTVELDGKTIKLQ 60
Query: 250 IWDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVG 429 IWDTAGQERFRTITSSYYRGAHGII+VYDVTDQESFNNVKQWLNEIDRYASENVNKLLVG Sbjct: 61 IWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVG 120
Query: 430 NKSDLTAKKVVDTQTAKAYADEIGIPFLETSAKNASNVEEAFMTMAAEI 576 NK+DLTAKKVVD QTAKA+ADEIGIPFLETSAKNA NVE+AFMTMAAEI Sbjct: 121 NKNDLTAKKVVDYQTAKAFADEIGIPFLETSAKNAINVEDAFMTMAAEI 169
>tr|A9SLS3|A9SLS3_PHYPA Rab1/RabD-family small GTPase OS=Physcomitrella patens subsp. patens GN=RabD11 PE=3 SV=1 Length = 204
Score = 322 bits (825), Expect = 9e-87 Identities = 160/169 (94%), Positives = 166/169 (98%) Frame = +1
Query: 70 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLESYISTIGVDFKIRTVELDSKTIKLQ 249 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLESYISTIGVDFKIRTVELD KTIKLQ Sbjct: 1 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLESYISTIGVDFKIRTVELDGKTIKLQ 60
Query: 250 IWDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVG 429 IWDTAGQERFRTITSSYYRGAHGII+VYDVTDQESFNNVKQWLNEIDRYASENVNKLLVG Sbjct: 61 IWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVG 120
Query: 430 NKSDLTAKKVVDTQTAKAYADEIGIPFLETSAKNASNVEEAFMTMAAEI 576 NKSDL +KKVVD +TAKA+ADEIGIPFLETSAKNA+NVE+AFMTMAAEI Sbjct: 121 NKSDLASKKVVDYETAKAFADEIGIPFLETSAKNATNVEQAFMTMAAEI 169
>tr|A9SMJ7|A9SMJ7_PHYPA Rab1/RabD-family small GTPase OS=Physcomitrella patens subsp. patens GN=RabD12 PE=3 SV=1 Length = 203
Score = 321 bits (823), Expect = 2e-86 Identities = 161/169 (95%), Positives = 165/169 (97%) Frame = +1
Query: 70 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLESYISTIGVDFKIRTVELDSKTIKLQ 249 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLESYISTIGVDFKIRTVELD KTIKLQ Sbjct: 1 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLESYISTIGVDFKIRTVELDGKTIKLQ 60
Query: 250 IWDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVG 429 IWDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVG Sbjct: 61 IWDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVG 120
Query: 430 NKSDLTAKKVVDTQTAKAYADEIGIPFLETSAKNASNVEEAFMTMAAEI 576 NKSDL +KKVVD TAKA+ADEIGIPFLETSAKNA+NVE+AFMTMAAEI Sbjct: 121 NKSDLASKKVVDYATAKAFADEIGIPFLETSAKNATNVEQAFMTMAAEI 169
>tr|A9NPH9|A9NPH9_PICSI Putative uncharacterized protein OS=Picea sitchensis PE=2 SV=1 Length = 202
Score = 315 bits (808), Expect = 9e-85 Identities = 157/169 (92%), Positives = 162/169 (95%) Frame = +1
Query: 70 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLESYISTIGVDFKIRTVELDSKTIKLQ 249 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLESYISTIGVDFKIRTVE D KTIKLQ Sbjct: 1 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLESYISTIGVDFKIRTVEQDGKTIKLQ 60
Query: 250 IWDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVG 429 IWDTAGQERFRTITSSYYRGAHGII+VYDVTDQESFNNVKQWLNEIDRYASENVNKLLVG Sbjct: 61 IWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVG 120
Query: 430 NKSDLTAKKVVDTQTAKAYADEIGIPFLETSAKNASNVEEAFMTMAAEI 576 NK DLTA + VD TAKA+ADEIGIPFLETSAKNA+NVE+AFMTMAAEI Sbjct: 121 NKCDLTANRAVDYDTAKAFADEIGIPFLETSAKNATNVEQAFMTMAAEI 169
>tr|B7FH02|B7FH02_MEDTR Putative uncharacterized protein OS=Medicago truncatula PE=2 SV=1 Length = 202
Score = 315 bits (807), Expect = 1e-84 Identities = 156/169 (92%), Positives = 164/169 (97%) Frame = +1
Query: 70 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLESYISTIGVDFKIRTVELDSKTIKLQ 249 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYL+SYISTIGVDFKIRTVE D KTIKLQ Sbjct: 1 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTIKLQ 60
Query: 250 IWDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVG 429 IWDTAGQERFRTITSSYYRGAHGII+VYDVTDQESFNNVKQWLNEIDRYASENVNKLLVG Sbjct: 61 IWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVG 120
Query: 430 NKSDLTAKKVVDTQTAKAYADEIGIPFLETSAKNASNVEEAFMTMAAEI 576 NKSDL+ KKVV ++TAKA+ADEIGIPF+ETSAKNASNVE+AFM MAAEI Sbjct: 121 NKSDLSDKKVVSSETAKAFADEIGIPFMETSAKNASNVEQAFMAMAAEI 169
>tr|Q1WK27|Q1WK27_CHLIN YptC1 OS=Chlamydomonas incerta GN=yptC1 PE=2 SV=1 Length = 203
Score = 315 bits (806), Expect = 1e-84 Identities = 156/169 (92%), Positives = 163/169 (96%) Frame = +1
Query: 70 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLESYISTIGVDFKIRTVELDSKTIKLQ 249 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADD+Y ESYISTIGVDFKIRTVELD K IKLQ Sbjct: 1 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTVELDGKVIKLQ 60
Query: 250 IWDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVG 429 IWDTAGQERFRTITSSYYRGAHGII+VYDVTDQESFNNVKQWLNEIDRYASENVNKLLVG Sbjct: 61 IWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVG 120
Query: 430 NKSDLTAKKVVDTQTAKAYADEIGIPFLETSAKNASNVEEAFMTMAAEI 576 NKSDLT+KKVV+ AKA+ADEIGIPFLETSAKNA+NVE+AFMTMAAEI Sbjct: 121 NKSDLTSKKVVEYSVAKAFADEIGIPFLETSAKNATNVEQAFMTMAAEI 169
>tr|A8JHQ7|A8JHQ7_CHLRE Small rab-related GTPase OS=Chlamydomonas reinhardtii GN=RABD1 PE=3 SV=1 Length = 203
Score = 315 bits (806), Expect = 1e-84 Identities = 156/169 (92%), Positives = 163/169 (96%) Frame = +1
Query: 70 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLESYISTIGVDFKIRTVELDSKTIKLQ 249 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADD+Y ESYISTIGVDFKIRTVELD K IKLQ Sbjct: 1 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTVELDGKVIKLQ 60
Query: 250 IWDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVG 429 IWDTAGQERFRTITSSYYRGAHGII+VYDVTDQESFNNVKQWLNEIDRYASENVNKLLVG Sbjct: 61 IWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVG 120
Query: 430 NKSDLTAKKVVDTQTAKAYADEIGIPFLETSAKNASNVEEAFMTMAAEI 576 NKSDLT+KKVV+ AKA+ADEIGIPFLETSAKNA+NVE+AFMTMAAEI Sbjct: 121 NKSDLTSKKVVEYSVAKAFADEIGIPFLETSAKNATNVEQAFMTMAAEI 169
>tr|A9PEC2|A9PEC2_POPTR Putative uncharacterized protein OS=Populus trichocarpa PE=2 SV=1 Length = 203
Score = 314 bits (804), Expect = 3e-84 Identities = 156/169 (92%), Positives = 162/169 (95%) Frame = +1
Query: 70 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLESYISTIGVDFKIRTVELDSKTIKLQ 249 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLESYISTIGVDFKIRTVE D KTIKLQ Sbjct: 1 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLESYISTIGVDFKIRTVEQDGKTIKLQ 60
Query: 250 IWDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVG 429 IWDTAGQERFRTITSSYYRGAHGII+VYDVTDQESFNNVKQWLNEIDRYASENVNKLLVG Sbjct: 61 IWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVG 120
Query: 430 NKSDLTAKKVVDTQTAKAYADEIGIPFLETSAKNASNVEEAFMTMAAEI 576 NK DLTA KVV +TAKA+ADEIGIPF+ETSAKNA+NVE+AFM MAAEI Sbjct: 121 NKCDLTANKVVSYETAKAFADEIGIPFMETSAKNATNVEQAFMAMAAEI 169
>tr|A7R0F4|A7R0F4_VITVI Chromosome undetermined scaffold_306, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00011421001 PE=3 SV=1 Length = 203
Score = 314 bits (804), Expect = 3e-84 Identities = 156/169 (92%), Positives = 162/169 (95%) Frame = +1
Query: 70 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLESYISTIGVDFKIRTVELDSKTIKLQ 249 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLESYISTIGVDFKIRTVE D KTIKLQ Sbjct: 1 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLESYISTIGVDFKIRTVEQDGKTIKLQ 60
Query: 250 IWDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVG 429 IWDTAGQERFRTITSSYYRGAHGII+VYDVTDQESFNNVKQWLNEIDRYASENVNKLLVG Sbjct: 61 IWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVG 120
Query: 430 NKSDLTAKKVVDTQTAKAYADEIGIPFLETSAKNASNVEEAFMTMAAEI 576 NK DLTA KVV +TAKA+ADEIGIPF+ETSAKNA+NVE+AFM MAAEI Sbjct: 121 NKCDLTANKVVSYETAKAFADEIGIPFMETSAKNATNVEQAFMAMAAEI 169
>tr|B4FC26|B4FC26_MAIZE Putative uncharacterized protein OS=Zea mays PE=2 SV=1 Length = 203
Score = 313 bits (801), Expect = 6e-84 Identities = 155/169 (91%), Positives = 163/169 (96%) Frame = +1
Query: 70 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLESYISTIGVDFKIRTVELDSKTIKLQ 249 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYL+SYISTIGVDFKIRTVE D KTIKLQ Sbjct: 1 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTIKLQ 60
Query: 250 IWDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVG 429 IWDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLNEIDRYAS+NVNKLLVG Sbjct: 61 IWDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLNEIDRYASDNVNKLLVG 120
Query: 430 NKSDLTAKKVVDTQTAKAYADEIGIPFLETSAKNASNVEEAFMTMAAEI 576 NKSDLTA KVV T+TAKA+ADE+GIPF+ETSAKNA+NVE+AFM MAA I Sbjct: 121 NKSDLTANKVVATETAKAFADEMGIPFMETSAKNATNVEQAFMAMAASI 169
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