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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
DK955278
Clone id TST39A01NGRL0022_K16
Library
Length 584
Definition Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0022_K16. 5' end sequence.
Accession
Tissue type prothallia with plantlets
Developmental stage gametophytes with sporophytes
Contig ID -
Sequence 
ACTTTTCTCAACTCTTTTCTGCAGTAAGTGCGTGAAGAAGACATAGCGAAGGACCACTGA
ACTCAAGCTATGTCTATGTCGAGCTGACTCGAATCCTTGAGATGGCTTTGCGGAGGACAT
TCCTCCGTTTGCGGAGAGGAGCTTCATCTCGTCAAACAAACTACAGCGCATGGTGTTTCT
CTGAGTCTCCTATACAGCGCACTTTAGCGCCCAGTTTACCCACGTTTAACACAAATTGCC
CCCTCCGTGCATGGACACGTAACCCTCTAAAAGCAAGAGATCTGTCTCGAAATTCCCTCA
CTAACCCTTACCAGTACCTCAGATTTTCAATAAGTCACTCAGCATGCCTTTGTCAGCTCG
ATGGTGCTGGAGAAAGATGGTCTTCAACAGAATCCCCCGGCACGGATTCACATGTGGATG
CTGGTCTGAGACGGTTGTTGCAGGTAGCCCGTTTCTCGTCATCAGCTGGTAAGACAGTTC
CGAAGGGATCTTCATGGAACCTGACAACAAAAGAAGGAATAGTTGGCAAGCCTTATGATA
GCCCAGAGACACCAATTGCAGATCTTCGCATTTTACAGAACTTA
■■Homology search results ■■ -
sp_hit_id Q9VDT6
Definition sp|Q9VDT6|RRMJ1_DROME Putative ribosomal RNA methyltransferase CG11447 OS=Drosophila melanogaster
Align length 64
Score (bit) 32.0
E-value 2.3
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK955278|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0022_K16, 5'
         (584 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q9VDT6|RRMJ1_DROME Putative ribosomal RNA methyltransferase C...    32   2.3  
sp|Q9P2B4|CT2NL_HUMAN CTTNBP2 N-terminal-like protein OS=Homo sa...    32   3.0  
sp|Q18007|ACM1_CAEEL Probable muscarinic acetylcholine receptor ...    32   3.0  
sp|Q5R5Y0|K1358_PONAB UPF0584 protein KIAA1358 homolog OS=Pongo ...    31   3.9  
sp|Q7Z6L1|K1358_HUMAN UPF0584 protein KIAA1358 OS=Homo sapiens G...    31   3.9  
sp|Q5RDH2|CT2NL_PONAB CTTNBP2 N-terminal-like protein OS=Pongo a...    31   3.9  
sp|Q9UTA4|POPI_SCHPO Ribonucleases P/MRP protein subunit pop1 OS...    30   6.7  
sp|P74117|Y1972_SYNY3 Uncharacterized protein slr1972 OS=Synecho...    30   8.8  

>sp|Q9VDT6|RRMJ1_DROME Putative ribosomal RNA methyltransferase
           CG11447 OS=Drosophila melanogaster GN=CG11447 PE=2 SV=1
          Length = 250

 Score = 32.0 bits (71), Expect = 2.3
 Identities = 21/64 (32%), Positives = 31/64 (48%), Gaps = 1/64 (1%)
 Frame = +3

Query: 156 TNYSAWCFSESPIQRTLAPSLPTFNTNCPLRAWTRNPLKARDLSRNSLTN-PYQYLRFSI 332
           T +    F+ S  Q+ L  +L     NC L     N    R L + S+TN  Y+ LRF++
Sbjct: 130 TIFGGMDFTSSLAQKRLREALQDRKVNCVLSDMAPNATGVRMLDQESITNLCYEVLRFAL 189

Query: 333 SHSA 344
           + SA
Sbjct: 190 AMSA 193


>sp|Q9P2B4|CT2NL_HUMAN CTTNBP2 N-terminal-like protein OS=Homo
           sapiens GN=CTTNBP2NL PE=1 SV=2
          Length = 639

 Score = 31.6 bits (70), Expect = 3.0
 Identities = 26/90 (28%), Positives = 35/90 (38%), Gaps = 2/90 (2%)
 Frame = +3

Query: 204 LAPSLPTFNTNCPLRAWTRNPLKARDLSRNSLTNPYQYLRFSISHSACLCQLDGAGERWS 383
           LA   P  N  CP+   T  P+ +   S  S  +P      S++ S C   +       S
Sbjct: 381 LAQEKPVENGGCPVGIETPVPMPSPLSSSGSSLSPSSTASSSLTSSPCSSPVLTKRLLGS 440

Query: 384 STESPGTDSHVDAGLRRLLQVAR--FSSSA 467
           S  SPG  S    G+ +    AR  F S A
Sbjct: 441 SASSPGYQSSYQVGINQRFHAARHKFQSQA 470


>sp|Q18007|ACM1_CAEEL Probable muscarinic acetylcholine receptor
           gar-1 OS=Caenorhabditis elegans GN=gar-1 PE=2 SV=3
          Length = 713

 Score = 31.6 bits (70), Expect = 3.0
 Identities = 18/47 (38%), Positives = 27/47 (57%), Gaps = 2/47 (4%)
 Frame = -3

Query: 186 TQRNTMRCSLFDEMKLLSANGGMSSAKP--SQGFESARHRHSLSSVV 52
           T  N+ RCS  +++ LLS + G+ S +P  S G  S R R+S S  +
Sbjct: 343 TAANSRRCSEMEKVSLLSESDGVPSTRPAKSYGRLSLRSRYSASESI 389


>sp|Q5R5Y0|K1358_PONAB UPF0584 protein KIAA1358 homolog OS=Pongo
           abelii PE=2 SV=1
          Length = 1165

 Score = 31.2 bits (69), Expect = 3.9
 Identities = 20/74 (27%), Positives = 31/74 (41%), Gaps = 6/74 (8%)
 Frame = +3

Query: 315 YLRFSISHSACLCQLDGAGERWSSTESPGTDSHVDAGLRRLLQVARFSSSA------GKT 476
           + R  +SHS      +  G  WS  ++PG    +  G   LL    +   A       ++
Sbjct: 221 WYREDVSHS------NPEGSSWSLLDTPGEVVQISCGPHDLLWATLWEGQALVREGINRS 274

Query: 477 VPKGSSWNLTTKEG 518
            PKGSSW++    G
Sbjct: 275 NPKGSSWSIVEPPG 288


>sp|Q7Z6L1|K1358_HUMAN UPF0584 protein KIAA1358 OS=Homo sapiens
           GN=KIAA1358 PE=1 SV=1
          Length = 1165

 Score = 31.2 bits (69), Expect = 3.9
 Identities = 20/74 (27%), Positives = 31/74 (41%), Gaps = 6/74 (8%)
 Frame = +3

Query: 315 YLRFSISHSACLCQLDGAGERWSSTESPGTDSHVDAGLRRLLQVARFSSSA------GKT 476
           + R  +SHS      +  G  WS  ++PG    +  G   LL    +   A       ++
Sbjct: 221 WYREDVSHS------NPEGSSWSLLDTPGEVVQISCGPHDLLWATLWEGQALVREGINRS 274

Query: 477 VPKGSSWNLTTKEG 518
            PKGSSW++    G
Sbjct: 275 NPKGSSWSIVEPPG 288


>sp|Q5RDH2|CT2NL_PONAB CTTNBP2 N-terminal-like protein OS=Pongo
           abelii GN=CTTNBP2NL PE=2 SV=1
          Length = 639

 Score = 31.2 bits (69), Expect = 3.9
 Identities = 26/90 (28%), Positives = 35/90 (38%), Gaps = 2/90 (2%)
 Frame = +3

Query: 204 LAPSLPTFNTNCPLRAWTRNPLKARDLSRNSLTNPYQYLRFSISHSACLCQLDGAGERWS 383
           LA   P  N  CP+   T  P+ +   S  S  +P      S++ S C   +       S
Sbjct: 381 LAQEKPVENGGCPVGIETPVPMPSPLPSSGSSLSPSSTASSSLTSSPCSSPVLTKRLLGS 440

Query: 384 STESPGTDSHVDAGLRRLLQVAR--FSSSA 467
           S  SPG  S    G+ +    AR  F S A
Sbjct: 441 SASSPGYQSSYQVGINQRFHAARHKFQSQA 470


>sp|Q9UTA4|POPI_SCHPO Ribonucleases P/MRP protein subunit pop1
           OS=Schizosaccharomyces pombe GN=pop1 PE=2 SV=1
          Length = 698

 Score = 30.4 bits (67), Expect = 6.7
 Identities = 18/60 (30%), Positives = 28/60 (46%), Gaps = 2/60 (3%)
 Frame = +2

Query: 356 ARWCWRKMVFNRIPRHGFTCGCWSETVVAGSPFLVISW*DSSEGIFMEPDNKRRN--SWQ 529
           A++ WRKM++ +  R G              PF  I + D+  G   E + K+RN  SW+
Sbjct: 481 AKFVWRKMMYQKGIRFGGLENLHQIAFEKRMPFFPIDYPDTISGQLCEEERKKRNEDSWK 540


>sp|P74117|Y1972_SYNY3 Uncharacterized protein slr1972
           OS=Synechocystis sp. (strain PCC 6803) GN=slr1972 PE=3
           SV=1
          Length = 359

 Score = 30.0 bits (66), Expect = 8.8
 Identities = 13/26 (50%), Positives = 17/26 (65%)
 Frame = +1

Query: 88  LESLRWLCGGHSSVCGEELHLVKQTT 165
           +E+LRWL  G  S+ G  + LV QTT
Sbjct: 36  MEALRWLAAGFMSIIGLAIGLVAQTT 61
tr_hit_id B2J6U4
Definition tr|B2J6U4|B2J6U4_NOSP7 Putative uncharacterized protein OS=Nostoc punctiforme (strain ATCC 29133 / PCC 73102)
Align length 69
Score (bit) 37.7
E-value 0.47
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK955278|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0022_K16, 5'
         (584 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|B2J6U4|B2J6U4_NOSP7 Putative uncharacterized protein OS=Nosto...    38   0.47 
tr|Q7SYD7|Q7SYD7_DANRE Cell division cycle 20 homolog OS=Danio r...    35   3.1  
tr|A5PMD2|A5PMD2_DANRE Cell division cycle 20 homolog OS=Danio r...    35   3.1  
tr|A5PMD1|A5PMD1_DANRE Cell division cycle 20 homolog (Fragment)...    35   3.1  
tr|B7QLT7|B7QLT7_IXOSC Putative uncharacterized protein OS=Ixode...    35   4.0  
tr|A8N978|A8N978_COPC7 Predicted protein OS=Coprinopsis cinerea ...    35   4.0  
tr|Q4WHK4|Q4WHK4_ASPFU Putative uncharacterized protein OS=Asper...    34   5.2  
tr|B0XVF9|B0XVF9_ASPFC Putative uncharacterized protein OS=Asper...    34   5.2  
tr|Q894U5|Q894U5_CLOTE Putative transcriptional regulatory prote...    34   6.9  
tr|B5W7X3|B5W7X3_SPIMA Putative uncharacterized protein OS=Arthr...    34   6.9  
tr|B4JJX9|B4JJX9_DROGR GH12154 OS=Drosophila grimshawi GN=GH1215...    34   6.9  
tr|Q0CZN2|Q0CZN2_ASPTN Putative uncharacterized protein OS=Asper...    34   6.9  
tr|Q8VQF7|Q8VQF7_XENBV Peptide synthetase XpsC (Fragment) OS=Xen...    33   9.0  
tr|A3IZB3|A3IZB3_9CHRO Amino acid adenylation (Fragment) OS=Cyan...    33   9.0  

>tr|B2J6U4|B2J6U4_NOSP7 Putative uncharacterized protein OS=Nostoc
           punctiforme (strain ATCC 29133 / PCC 73102)
           GN=Npun_R5565 PE=4 SV=1
          Length = 786

 Score = 37.7 bits (86), Expect = 0.47
 Identities = 23/69 (33%), Positives = 39/69 (56%), Gaps = 7/69 (10%)
 Frame = +3

Query: 384 STESPGTDSHVDAG--LRR---LLQVARFSSSAGKTVPKGSSW--NLTTKEGIVGKPYDS 542
           S + PG DS ++ G  L R   LL ++  + +  +TVP+GSSW  N+ T +G  G+P   
Sbjct: 709 SVQHPGEDSPINDGTILSRDIELLDLSGVTFNQARTVPRGSSWPSNIPTADGGKGQPRSF 768

Query: 543 PETPIADLR 569
           P+  +  ++
Sbjct: 769 PKPSVIGIK 777


>tr|Q7SYD7|Q7SYD7_DANRE Cell division cycle 20 homolog OS=Danio
           rerio GN=cdc20 PE=2 SV=1
          Length = 496

 Score = 35.0 bits (79), Expect = 3.1
 Identities = 36/150 (24%), Positives = 60/150 (40%), Gaps = 19/150 (12%)
 Frame = +3

Query: 183 ESPIQRTLAPSLPTFNTNCPLRAWTRNPLKARDLSRNSLTNPYQYLRFSISHSACLCQLD 362
           E+ I   L   +P   TN P+  W R    +   S NS+ +P + +  S+S S    +  
Sbjct: 7   ENDIHNVLRLDMPI--TNAPMARWQRKASTSNSSSTNSI-SPNKSVNRSVSLSKTPSKTP 63

Query: 363 GAGERWSSTES-PGTDSHVDAGLRRLLQVARF---------SSSAGKTVPKGSSWNLTTK 512
           G   +  +T S  G D ++     + L VA F           S   T P   +W+++  
Sbjct: 64  GKNGKTQNTPSKAGGDRYIPTRNNKQLDVASFLISKENEPVEESEPSTAPNQKAWSMSLN 123

Query: 513 E---------GIVGKPYDSPETPIADLRIL 575
                      + GKP  +PE    +L++L
Sbjct: 124 GYDIEEAKILHLGGKPLYAPEGYQNNLKVL 153


>tr|A5PMD2|A5PMD2_DANRE Cell division cycle 20 homolog OS=Danio
           rerio GN=cdc20 PE=4 SV=1
          Length = 496

 Score = 35.0 bits (79), Expect = 3.1
 Identities = 36/150 (24%), Positives = 60/150 (40%), Gaps = 19/150 (12%)
 Frame = +3

Query: 183 ESPIQRTLAPSLPTFNTNCPLRAWTRNPLKARDLSRNSLTNPYQYLRFSISHSACLCQLD 362
           E+ I   L   +P   TN P+  W R    +   S NS+ +P + +  S+S S    +  
Sbjct: 7   ENDIHNVLRLDMPI--TNAPMARWQRKASTSNSSSTNSI-SPNKSVNRSVSLSKTPSKTP 63

Query: 363 GAGERWSSTES-PGTDSHVDAGLRRLLQVARF---------SSSAGKTVPKGSSWNLTTK 512
           G   +  +T S  G D ++     + L VA F           S   T P   +W+++  
Sbjct: 64  GKNGKTQNTPSKAGGDRYIPTRNNKQLDVASFLISKENEPVEESEPSTAPNQKAWSMSLN 123

Query: 513 E---------GIVGKPYDSPETPIADLRIL 575
                      + GKP  +PE    +L++L
Sbjct: 124 GYDIEEAKILHLGGKPLYAPEGYQNNLKVL 153


>tr|A5PMD1|A5PMD1_DANRE Cell division cycle 20 homolog (Fragment)
           OS=Danio rerio GN=cdc20 PE=4 SV=1
          Length = 243

 Score = 35.0 bits (79), Expect = 3.1
 Identities = 36/150 (24%), Positives = 60/150 (40%), Gaps = 19/150 (12%)
 Frame = +3

Query: 183 ESPIQRTLAPSLPTFNTNCPLRAWTRNPLKARDLSRNSLTNPYQYLRFSISHSACLCQLD 362
           E+ I   L   +P   TN P+  W R    +   S NS+ +P + +  S+S S    +  
Sbjct: 7   ENDIHNVLRLDMPI--TNAPMARWQRKASTSNSSSTNSI-SPNKSVNRSVSLSKTPSKTP 63

Query: 363 GAGERWSSTES-PGTDSHVDAGLRRLLQVARF---------SSSAGKTVPKGSSWNLTTK 512
           G   +  +T S  G D ++     + L VA F           S   T P   +W+++  
Sbjct: 64  GKNGKTQNTPSKAGGDRYIPTRNNKQLDVASFLISKENEPVEESEPSTAPNQKAWSMSLN 123

Query: 513 E---------GIVGKPYDSPETPIADLRIL 575
                      + GKP  +PE    +L++L
Sbjct: 124 GYDIEEAKILHLGGKPLYAPEGYQNNLKVL 153


>tr|B7QLT7|B7QLT7_IXOSC Putative uncharacterized protein OS=Ixodes
           scapularis GN=IscW_ISCW013953 PE=4 SV=1
          Length = 420

 Score = 34.7 bits (78), Expect = 4.0
 Identities = 32/120 (26%), Positives = 54/120 (45%), Gaps = 3/120 (2%)
 Frame = +3

Query: 129 LRRGASSRQTNYSAWCFSE--SPIQRTLAPSLPTFNTNCPLRAWTRNPLKAR-DLSRNSL 299
           L R  +S  +N+    F+E  SP +   A  L T     P   W R PL+A  + + +SL
Sbjct: 200 LGRKLASFTSNHHFTLFTEPSSPTRLGTAQELDT----TPDLTWIRRPLRAIWENTEDSL 255

Query: 300 TNPYQYLRFSISHSACLCQLDGAGERWSSTESPGTDSHVDAGLRRLLQVARFSSSAGKTV 479
            + +Q L   +  S+CLC+      R   T+ P   + +D      L +  +S++   T+
Sbjct: 256 GSDFQILELHLQISSCLCRTTTTYPRTKITDWPKARADLDTVDTDTLSLEAWSTAILATI 315


>tr|A8N978|A8N978_COPC7 Predicted protein OS=Coprinopsis cinerea
           (strain Okayama-7 / 130 / FGSC 9003) GN=CC1G_00953 PE=4
           SV=1
          Length = 362

 Score = 34.7 bits (78), Expect = 4.0
 Identities = 16/35 (45%), Positives = 21/35 (60%)
 Frame = +3

Query: 312 QYLRFSISHSACLCQLDGAGERWSSTESPGTDSHV 416
           +Y+R SI  S+ +C LDG   RW +T SP   S V
Sbjct: 155 EYVRDSIQFSSVVCVLDGKSPRWKNTPSPVLSSCV 189


>tr|Q4WHK4|Q4WHK4_ASPFU Putative uncharacterized protein
           OS=Aspergillus fumigatus GN=AFUA_2G05080 PE=4 SV=2
          Length = 1184

 Score = 34.3 bits (77), Expect = 5.2
 Identities = 28/96 (29%), Positives = 40/96 (41%)
 Frame = +3

Query: 294 SLTNPYQYLRFSISHSACLCQLDGAGERWSSTESPGTDSHVDAGLRRLLQVARFSSSAGK 473
           SL  P    R S   +A +  LDG+    + + SPG    +     + L      + + K
Sbjct: 217 SLVRPSILRRLSPGLAARVKLLDGSSRVSTPSRSPGNVGRIPEEQIKELDNLHHQNLSIK 276

Query: 474 TVPKGSSWNLTTKEGIVGKPYDSPETPIADLRILQN 581
              KG SWN      I GK  D+ +TP     ILQ+
Sbjct: 277 VERKGRSWNALQ---IAGKKQDTQQTPSEASEILQH 309


>tr|B0XVF9|B0XVF9_ASPFC Putative uncharacterized protein
           OS=Aspergillus fumigatus (strain CEA10 / CBS 144.89 /
           FGSC A1163) GN=AFUB_022109 PE=4 SV=1
          Length = 1064

 Score = 34.3 bits (77), Expect = 5.2
 Identities = 28/96 (29%), Positives = 40/96 (41%)
 Frame = +3

Query: 294 SLTNPYQYLRFSISHSACLCQLDGAGERWSSTESPGTDSHVDAGLRRLLQVARFSSSAGK 473
           SL  P    R S   +A +  LDG+    + + SPG    +     + L      + + K
Sbjct: 97  SLVRPSILRRLSPGLAARVKLLDGSSRVSTPSRSPGNVGRIPEEQIKELDNLHHQNLSIK 156

Query: 474 TVPKGSSWNLTTKEGIVGKPYDSPETPIADLRILQN 581
              KG SWN      I GK  D+ +TP     ILQ+
Sbjct: 157 VERKGRSWNALQ---IAGKKQDTQQTPSEASEILQH 189


>tr|Q894U5|Q894U5_CLOTE Putative transcriptional regulatory protein
           OS=Clostridium tetani GN=CTC_01439 PE=4 SV=1
          Length = 235

 Score = 33.9 bits (76), Expect = 6.9
 Identities = 16/58 (27%), Positives = 30/58 (51%)
 Frame = -3

Query: 549 SLGYHKACQLFLLLLSGSMKIPSELSYQLMTRNGLPATTVSDQHPHVNPCRGILLKTI 376
           S+G+ K CQ ++++L G + +        +T +   + + S QH ++N   G L  TI
Sbjct: 172 SIGHSKKCQEYIMVLEGELTLEINNKIYKLTSDDSISFSASSQHIYINSGNGTLKATI 229


>tr|B5W7X3|B5W7X3_SPIMA Putative uncharacterized protein
           OS=Arthrospira maxima CS-328 GN=AmaxDRAFT_4873 PE=4 SV=1
          Length = 157

 Score = 33.9 bits (76), Expect = 6.9
 Identities = 21/54 (38%), Positives = 27/54 (50%)
 Frame = -2

Query: 529 LPTIPSFVVRFHEDPFGTVLPADDEKRATCNNRLRPASTCESVPGDSVEDHLSP 368
           +P    F+VRF    FG  LP+   K  +CNN  +  S   +V GDS   H SP
Sbjct: 106 IPAPTCFLVRFSRTNFGDHLPSAQPK--SCNNDFK--SDSRTVAGDSASFHQSP 155