| DK955279 |
| Clone id |
TST39A01NGRL0022_K17 |
| Library |
TST39 |
| Length |
599 |
| Definition |
Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0022_K17. 5' end sequence. |
| Accession |
DK955279 |
| Tissue type |
prothallia with plantlets |
| Developmental stage |
gametophytes with sporophytes |
| Contig ID |
- |
| Sequence |
GGAAAGAGTAGAGAAGTTTCAAGGTGTAAATCTCTACATAAAGAATATTGAGGATACCAT
TGATGACGAGAAATTGAAGGAGATTTTCTCAGAATTTGGACTAGTTCTGTCTTGCAAGGT
TATGAAGACCCCACAGGGCCACAGTATGGGTTCTGGCTTTGTGTCTTTTTCAATGTCTGA
CGAGGCATCAAGAGCTGTCAATGAGTTGAATGGAAAGATGGTGGGAAGCAAACCTTTGTA
TGTTGCACAGGCCCAAAAGAAGGAGGATAGAAGAGCCAGACTTCAGGCCCACTTTGCTCA
TATGAGAAATTCTGCAATGAATGTGCCTCCTGCAAATGTGCCCCCCCCTCCCATGTATCA
TCCTGGGCCTCCTGGGGTCGGTCAGCAGGTCTTCTATGCCCAGCCTCCTGGGATGATGCC
CCCTCAGGCAAACGGGTTTGGATATCAGCATCCAATGGTGGCTGGTGTAAGGCCAGGAGC
ACCACAACCACCAATGCCGAACTACTTCATGCCTATAGTGCAAAGACCAGGCCAGCACCA
ACGATCAGGAAATCGACGAGCAGGTGGGCCTACCCAGCCTCAACAACAACCGCTTCTGC |
| ■■Homology search results ■■ |
- |
| Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
| sp_hit_id |
P42731 |
| Definition |
sp|P42731|PABP2_ARATH Polyadenylate-binding protein 2 OS=Arabidopsis thaliana |
| Align length |
190 |
| Score (bit) |
156.0 |
| E-value |
8.0e-38 |
| Report |
 BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DK955279|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0022_K17, 5'
(583 letters)
Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
sp|P42731|PABP2_ARATH Polyadenylate-binding protein 2 OS=Arabido... 156 8e-38
sp|O64380|PABP3_ARATH Polyadenylate-binding protein 3 OS=Arabido... 130 6e-30
sp|Q05196|PABP5_ARATH Polyadenylate-binding protein 5 OS=Arabido... 127 4e-29
sp|Q4P8R9|PABP_USTMA Polyadenylate-binding protein, cytoplasmic ... 116 7e-26
sp|Q13310|PABP4_HUMAN Polyadenylate-binding protein 4 OS=Homo sa... 102 1e-21
sp|Q54BM2|PABPB_DICDI Polyadenylate-binding protein 1-B OS=Dicty... 101 2e-21
sp|Q4VXU2|PAP1L_HUMAN Polyadenylate-binding protein 1-like OS=Ho... 100 9e-21
sp|Q6BI95|PABP_DEBHA Polyadenylate-binding protein, cytoplasmic ... 100 9e-21
sp|A5DM21|PABP_PICGU Polyadenylate-binding protein, cytoplasmic ... 99 2e-20
sp|Q6CDH3|PABP_YARLI Polyadenylate-binding protein, cytoplasmic ... 98 3e-20
sp|Q5KBW2|PABP_CRYNE Polyadenylate-binding protein, cytoplasmic ... 98 3e-20
sp|P31209|PABP_SCHPO Polyadenylate-binding protein, cytoplasmic ... 97 6e-20
sp|Q6CSV3|PABP_KLULA Polyadenylate-binding protein, cytoplasmic ... 97 6e-20
sp|Q6DEY7|EPAB_XENTR Embryonic polyadenylate-binding protein OS=... 96 1e-19
sp|Q6FKG4|PABP_CANGA Polyadenylate-binding protein, cytoplasmic ... 96 1e-19
sp|Q6IP09|PABPB_XENLA Polyadenylate-binding protein 1-B OS=Xenop... 96 1e-19
sp|Q6GR16|EPABB_XENLA Embryonic polyadenylate-binding protein B ... 96 1e-19
sp|P04147|PABP_YEAST Polyadenylate-binding protein, cytoplasmic ... 95 2e-19
sp|Q74ZS6|PABP_ASHGO Polyadenylate-binding protein, cytoplasmic ... 95 2e-19
sp|P21187|PABP_DROME Polyadenylate-binding protein OS=Drosophila... 94 4e-19
sp|Q5AI15|PABP_CANAL Polyadenylate-binding protein, cytoplasmic ... 94 4e-19
sp|Q98SP8|EPABA_XENLA Embryonic polyadenylate-binding protein A ... 94 5e-19
sp|A5DW14|PABP_LODEL Polyadenylate-binding protein, cytoplasmic ... 92 1e-18
sp|Q9EPH8|PABP1_RAT Polyadenylate-binding protein 1 OS=Rattus no... 92 1e-18
sp|Q5R8F7|PABP1_PONAB Polyadenylate-binding protein 1 OS=Pongo a... 92 1e-18
sp|P29341|PABP1_MOUSE Polyadenylate-binding protein 1 OS=Mus mus... 92 1e-18
sp|P11940|PABP1_HUMAN Polyadenylate-binding protein 1 OS=Homo sa... 92 1e-18
sp|P61286|PABP1_BOVIN Polyadenylate-binding protein 1 OS=Bos tau... 92 1e-18
sp|P20965|PABPA_XENLA Polyadenylate-binding protein 1-A OS=Xenop... 91 4e-18
sp|A3LXL0|PABP_PICST Polyadenylate-binding protein, cytoplasmic ... 89 2e-17
>sp|P42731|PABP2_ARATH Polyadenylate-binding protein 2
OS=Arabidopsis thaliana GN=PAB2 PE=1 SV=1
Length = 629
Score = 156 bits (394), Expect = 8e-38
Identities = 89/190 (46%), Positives = 115/190 (60%), Gaps = 1/190 (0%)
Frame = +2
Query: 2 ERVEKFQGVNLYIKNIEDTIDDEKLKEIFSEFGLVLSCKVMKTPQGHXXXXXXXXXXXXD 181
E +KFQ NLY+KN++ +I DEKLKEIFS FG V S KVM+ P G +
Sbjct: 310 EAADKFQSSNLYVKNLDPSISDEKLKEIFSPFGTVTSSKVMRDPNGTSKGSGFVAFATPE 369
Query: 182 EASRAVNELNGKMVGSKPLYVAQAQKKEDRRARLQAHFAHMRNSXXXXXXXXXXXXXXXX 361
EA+ A+++L+GKM+ SKPLYVA AQ+KEDRR RLQA F+ +R
Sbjct: 370 EATEAMSQLSGKMIESKPLYVAIAQRKEDRRVRLQAQFSQVR--PVAMQPSVGPRMPVYP 427
Query: 362 XXXXXXXQQVFYAQ-PPGMMPPQANGFGYQHPMVAGVRPGAPQPPMPNYFMPIVQRPGQH 538
QQ+FY Q PP M+PPQ G+GYQ +V G+RPG P+P++FMP+VQ P Q
Sbjct: 428 PGGPGIGQQMFYGQAPPAMIPPQP-GYGYQQQLVPGMRPGG--GPVPSFFMPMVQ-PQQQ 483
Query: 539 QRSGNRRAGG 568
+ G RR GG
Sbjct: 484 RPGGGRRPGG 493
Score = 66.2 bits (160), Expect = 1e-10
Identities = 33/94 (35%), Positives = 49/94 (52%)
Frame = +2
Query: 14 KFQGVNLYIKNIEDTIDDEKLKEIFSEFGLVLSCKVMKTPQGHXXXXXXXXXXXXDEASR 193
K + N+Y+KN+ ++ D+ LK F E+G + S VMK +G D+A+R
Sbjct: 211 KTKFTNVYVKNLAESTTDDDLKNAFGEYGKITSAVVMKDGEGKSKGFGFVNFENADDAAR 270
Query: 194 AVNELNGKMVGSKPLYVAQAQKKEDRRARLQAHF 295
AV LNG K YV +AQKK +R L+ +
Sbjct: 271 AVESLNGHKFDDKEWYVGRAQKKSERETELRVRY 304
Score = 57.8 bits (138), Expect = 4e-08
Identities = 25/81 (30%), Positives = 46/81 (56%)
Frame = +2
Query: 29 NLYIKNIEDTIDDEKLKEIFSEFGLVLSCKVMKTPQGHXXXXXXXXXXXXDEASRAVNEL 208
N++IKN++++ID + L + FS FG ++SCKV G + A +A+ +L
Sbjct: 125 NIFIKNLDESIDHKALHDTFSSFGNIVSCKVAVDSSGQSKGYGFVQYANEESAQKAIEKL 184
Query: 209 NGKMVGSKPLYVAQAQKKEDR 271
NG ++ K +YV ++++R
Sbjct: 185 NGMLLNDKQVYVGPFLRRQER 205
Score = 30.4 bits (67), Expect = 6.7
Identities = 18/83 (21%), Positives = 39/83 (46%), Gaps = 1/83 (1%)
Frame = +2
Query: 14 KFQGVNLYIKNIEDTIDDEKLKEIFSEFGLVLSCKVMKT-PQGHXXXXXXXXXXXXDEAS 190
+F +LY+ +++ + D +L + F + G V++ +V + +A+
Sbjct: 32 QFGNTSLYVGDLDFNVTDSQLFDAFGQMGTVVTVRVCRDLVTRRSLGYGYVNFTNPQDAA 91
Query: 191 RAVNELNGKMVGSKPLYVAQAQK 259
RA+ ELN + KP+ V + +
Sbjct: 92 RAIQELNYIPLYGKPIRVMYSHR 114
>sp|O64380|PABP3_ARATH Polyadenylate-binding protein 3
OS=Arabidopsis thaliana GN=PAB3 PE=2 SV=1
Length = 660
Score = 130 bits (326), Expect = 6e-30
Identities = 79/195 (40%), Positives = 107/195 (54%), Gaps = 4/195 (2%)
Frame = +2
Query: 5 RVEKFQGVNLYIKNIEDTIDDEKLKEIFSEFGLVLSCKVMKTPQGHXXXXXXXXXXXXDE 184
R EK QG NLY+KN++D++DDEKLKE+FSE+G V S KVM PQG +E
Sbjct: 325 RFEKSQGANLYLKNLDDSVDDEKLKEMFSEYGNVTSSKVMLNPQGMSRGFGFVAYSNPEE 384
Query: 185 ASRAVNELNGKMVGSKPLYVAQAQKKEDRRARLQAHFAHMRNSXXXXXXXXXXXXXXXXX 364
A RA++E+NGKM+G KPLY+A AQ+KEDRRA LQA F+ +R
Sbjct: 385 ALRALSEMNGKMIGRKPLYIALAQRKEDRRAHLQALFSQIR-----APGPMSGFHHPPGG 439
Query: 365 XXXXXXQQVFYAQ-PPGMMPPQANGFGYQHPMVAGVRPGAPQPPMPNYFM---PIVQRPG 532
Q ++ Q M+P Q G+G+Q + G+RPG+ P F+ P+ ++P
Sbjct: 440 PMPGPPQHMYVGQNGASMVPSQPIGYGFQPQFMPGMRPGSG----PGNFIVPYPLQRQPQ 495
Query: 533 QHQRSGNRRAGGPTQ 577
R G RR Q
Sbjct: 496 TGPRMGFRRGATNVQ 510
Score = 61.6 bits (148), Expect = 3e-09
Identities = 30/93 (32%), Positives = 51/93 (54%)
Frame = +2
Query: 29 NLYIKNIEDTIDDEKLKEIFSEFGLVLSCKVMKTPQGHXXXXXXXXXXXXDEASRAVNEL 208
N+Y+KN+ I +++L++ F +FG++ S VM+ G+ + A+ AV ++
Sbjct: 230 NVYVKNLPKEIGEDELRKTFGKFGVISSAVVMRDQSGNSRCFGFVNFECTEAAASAVEKM 289
Query: 209 NGKMVGSKPLYVAQAQKKEDRRARLQAHFAHMR 307
NG +G LYV +AQKK +R L+ F R
Sbjct: 290 NGISLGDDVLYVGRAQKKSEREEELRRKFEQER 322
Score = 56.6 bits (135), Expect = 9e-08
Identities = 26/81 (32%), Positives = 46/81 (56%)
Frame = +2
Query: 29 NLYIKNIEDTIDDEKLKEIFSEFGLVLSCKVMKTPQGHXXXXXXXXXXXXDEASRAVNEL 208
N++IKN++ +ID++ L E FS FG +LSCKV G + A A+++L
Sbjct: 137 NIFIKNLDASIDNKALFETFSSFGTILSCKVAMDVTGRSKGYGFVQFEKEESAQAAIDKL 196
Query: 209 NGKMVGSKPLYVAQAQKKEDR 271
NG ++ K ++V ++++R
Sbjct: 197 NGMLMNDKQVFVGHFIRRQER 217
>sp|Q05196|PABP5_ARATH Polyadenylate-binding protein 5
OS=Arabidopsis thaliana GN=PAB5 PE=2 SV=2
Length = 668
Score = 127 bits (319), Expect = 4e-29
Identities = 80/199 (40%), Positives = 105/199 (52%), Gaps = 6/199 (3%)
Frame = +2
Query: 5 RVEKFQGVNLYIKNIEDTIDDEKLKEIFSEFGLVLSCKVMKTPQGHXXXXXXXXXXXXDE 184
R EK QG NLY+KN++D+++DEKLKE+FSE+G V SCKVM QG +E
Sbjct: 321 RFEKLQGSNLYLKNLDDSVNDEKLKEMFSEYGNVTSCKVMMNSQGLSRGFGFVAYSNPEE 380
Query: 185 ASRAVNELNGKMVGSKPLYVAQAQKKEDRRARLQAHFAHMRN----SXXXXXXXXXXXXX 352
A A+ E+NGKM+G KPLYVA AQ+KE+R+A LQ+ F +R+ S
Sbjct: 381 ALLAMKEMNGKMIGRKPLYVALAQRKEERQAHLQSLFTQIRSPGTMSPVPSPMSGFHHHP 440
Query: 353 XXXXXXXXXXQQVFYAQPPGMMPPQANGFGYQHPMVAGVRPGAPQPPMPNYFMPI-VQRP 529
G++P Q G+GYQ + G+RPGA PN+ MP +QR
Sbjct: 441 PGGPMSGPHHPMFIGHNGQGLVPSQPMGYGYQVQFMPGMRPGAGP---PNFMMPFPLQRQ 497
Query: 530 GQ-HQRSGNRRAGGPTQPQ 583
Q R G RR Q Q
Sbjct: 498 TQPGPRVGFRRGANNMQQQ 516
Score = 63.5 bits (153), Expect = 7e-10
Identities = 34/95 (35%), Positives = 51/95 (53%)
Frame = +2
Query: 29 NLYIKNIEDTIDDEKLKEIFSEFGLVLSCKVMKTPQGHXXXXXXXXXXXXDEASRAVNEL 208
N+Y+KN+ I D++LK+ F ++G + S VMK G+ + A+ AV ++
Sbjct: 226 NVYVKNLPKEITDDELKKTFGKYGDISSAVVMKDQSGNSRSFGFVNFVSPEAAAVAVEKM 285
Query: 209 NGKMVGSKPLYVAQAQKKEDRRARLQAHFAHMRNS 313
NG +G LYV +AQKK DR L+ F R S
Sbjct: 286 NGISLGEDVLYVGRAQKKSDREEELRRKFEQERIS 320
Score = 57.8 bits (138), Expect = 4e-08
Identities = 27/81 (33%), Positives = 46/81 (56%)
Frame = +2
Query: 29 NLYIKNIEDTIDDEKLKEIFSEFGLVLSCKVMKTPQGHXXXXXXXXXXXXDEASRAVNEL 208
N++IKN++ +ID++ L E FS FG +LSCKV G + A A+++L
Sbjct: 133 NVFIKNLDASIDNKALYETFSSFGTILSCKVAMDVVGRSKGYGFVQFEKEETAQAAIDKL 192
Query: 209 NGKMVGSKPLYVAQAQKKEDR 271
NG ++ K ++V +++DR
Sbjct: 193 NGMLLNDKQVFVGHFVRRQDR 213
>sp|Q4P8R9|PABP_USTMA Polyadenylate-binding protein, cytoplasmic and
nuclear OS=Ustilago maydis GN=PAB1 PE=3 SV=1
Length = 651
Score = 116 bits (291), Expect = 7e-26
Identities = 68/193 (35%), Positives = 94/193 (48%)
Frame = +2
Query: 2 ERVEKFQGVNLYIKNIEDTIDDEKLKEIFSEFGLVLSCKVMKTPQGHXXXXXXXXXXXXD 181
E++ KFQGVNLY+KNI ++ DDE+L+E F+ FG + SCK+M+ P G +
Sbjct: 322 EKLAKFQGVNLYLKNIPESYDDERLREEFAPFGAITSCKIMRAPSGVSRGFGFVCYSAPE 381
Query: 182 EASRAVNELNGKMVGSKPLYVAQAQKKEDRRARLQAHFAHMRNSXXXXXXXXXXXXXXXX 361
EA++AV+E+NGKM+ ++PLYVA AQ+K+ RR +L+A RN
Sbjct: 382 EANKAVSEMNGKMLDNRPLYVALAQRKDVRRQQLEAQIM-QRNQLRLQQQAAAQGMGYPG 440
Query: 362 XXXXXXXQQVFYAQPPGMMPPQANGFGYQHPMVAGVRPGAPQPPMPNYFMPIVQRPGQHQ 541
F QP GM+P P + P P MP RP +
Sbjct: 441 PGMYYPQPGAFPGQPGGMVPRPRYAPAGMMPQGMPMAPYGQPGQFPAGMMPQGYRPARPP 500
Query: 542 RSGNRRAGGPTQP 580
R AGGP P
Sbjct: 501 RGAPNAAGGPAPP 513
Score = 59.3 bits (142), Expect = 1e-08
Identities = 27/94 (28%), Positives = 52/94 (55%)
Frame = +2
Query: 29 NLYIKNIEDTIDDEKLKEIFSEFGLVLSCKVMKTPQGHXXXXXXXXXXXXDEASRAVNEL 208
N+Y KN++ + D++ +++F++FG + SC + + G +EA +AV+EL
Sbjct: 228 NVYAKNVDPEVTDDEFEKLFTKFGKITSCVLQRDEDGKSKGFGFVNFEDHNEAQKAVDEL 287
Query: 209 NGKMVGSKPLYVAQAQKKEDRRARLQAHFAHMRN 310
+ + L+VA+AQKK +R L+ + +N
Sbjct: 288 HDSDFKGQKLFVARAQKKSEREEELRRSYEAAKN 321
Score = 52.4 bits (124), Expect = 2e-06
Identities = 27/94 (28%), Positives = 50/94 (53%)
Frame = +2
Query: 29 NLYIKNIEDTIDDEKLKEIFSEFGLVLSCKVMKTPQGHXXXXXXXXXXXXDEASRAVNEL 208
N++IKN++ ID++ L + F+ FG +LSCKV G + A A+ +
Sbjct: 136 NIFIKNLDAGIDNKALHDTFAAFGNILSCKVATNETG-SLGYGFVHYETAEAAEAAIKHV 194
Query: 209 NGKMVGSKPLYVAQAQKKEDRRARLQAHFAHMRN 310
NG ++ K +YV +++R+A+++ A+ N
Sbjct: 195 NGMLLNDKKVYVGHHIPRKERQAKIEETRANFTN 228
>sp|Q13310|PABP4_HUMAN Polyadenylate-binding protein 4 OS=Homo
sapiens GN=PABPC4 PE=1 SV=1
Length = 644
Score = 102 bits (254), Expect = 1e-21
Identities = 51/94 (54%), Positives = 68/94 (72%)
Frame = +2
Query: 2 ERVEKFQGVNLYIKNIEDTIDDEKLKEIFSEFGLVLSCKVMKTPQGHXXXXXXXXXXXXD 181
ER+ ++QGVNLYIKN++DTIDDEKL++ FS FG + S KVM G +
Sbjct: 286 ERISRYQGVNLYIKNLDDTIDDEKLRKEFSPFGSITSAKVM-LEDGRSKGFGFVCFSSPE 344
Query: 182 EASRAVNELNGKMVGSKPLYVAQAQKKEDRRARL 283
EA++AV E+NG++VGSKPLYVA AQ+KE+R+A L
Sbjct: 345 EATKAVTEMNGRIVGSKPLYVALAQRKEERKAHL 378
Score = 83.6 bits (205), Expect = 7e-16
Identities = 39/93 (41%), Positives = 59/93 (63%)
Frame = +2
Query: 29 NLYIKNIEDTIDDEKLKEIFSEFGLVLSCKVMKTPQGHXXXXXXXXXXXXDEASRAVNEL 208
N+YIKN + +DDE LKE+FS+FG LS KVM+ P G ++A++AV E+
Sbjct: 192 NVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRDPNGKSKGFGFVSYEKHEDANKAVEEM 251
Query: 209 NGKMVGSKPLYVAQAQKKEDRRARLQAHFAHMR 307
NGK + K ++V +AQKK +R+A L+ F ++
Sbjct: 252 NGKEISGKIIFVGRAQKKVERQAELKRKFEQLK 284
Score = 54.3 bits (129), Expect = 4e-07
Identities = 27/94 (28%), Positives = 52/94 (55%)
Frame = +2
Query: 29 NLYIKNIEDTIDDEKLKEIFSEFGLVLSCKVMKTPQGHXXXXXXXXXXXXDEASRAVNEL 208
N++IKN++ +ID++ L + FS FG +LSCKV+ G + A +A+ ++
Sbjct: 100 NVFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENG-SKGYAFVHFETQEAADKAIEKM 158
Query: 209 NGKMVGSKPLYVAQAQKKEDRRARLQAHFAHMRN 310
NG ++ + ++V + + +++R A L A N
Sbjct: 159 NGMLLNDRKVFVGRFKSRKEREAELGAKAKEFTN 192
>sp|Q54BM2|PABPB_DICDI Polyadenylate-binding protein 1-B
OS=Dictyostelium discoideum GN=pabpB PE=1 SV=1
Length = 565
Score = 101 bits (252), Expect = 2e-21
Identities = 70/187 (37%), Positives = 92/187 (49%), Gaps = 1/187 (0%)
Frame = +2
Query: 14 KFQGVNLYIKNIEDTIDDEKLKEIFSEFGLVLSCKVMKTPQG-HXXXXXXXXXXXXDEAS 190
K+QGVNLYIKNI+D+ID++KL+E+FS+FG + S VMK + DEA+
Sbjct: 280 KYQGVNLYIKNIDDSIDNDKLREVFSQFGTITSAIVMKDDKATTSKGFGFVCYTAPDEAT 339
Query: 191 RAVNELNGKMVGSKPLYVAQAQKKEDRRARLQAHFAHMRNSXXXXXXXXXXXXXXXXXXX 370
RAV E+NG+M+G+KPLYVA AQ+K+ RRA+L+ +
Sbjct: 340 RAVTEMNGRMIGTKPLYVALAQRKDIRRAQLEMQHQQKFKTGIRQQMPPTYGSGPVFFTP 399
Query: 371 XXXXQQVFYAQPPGMMPPQANGFGYQHPMVAGVRPGAPQPPMPNYFMPIVQRPGQHQRSG 550
QV Y Q MMP N G GV G Q NY ++ G Q G
Sbjct: 400 APVNPQVVYQQ---MMPRPRNWNG----QPVGVPQG--QYANMNYARGQPRQNGPRQNGG 450
Query: 551 NRRAGGP 571
R GP
Sbjct: 451 QPRQNGP 457
Score = 54.3 bits (129), Expect = 4e-07
Identities = 25/89 (28%), Positives = 45/89 (50%)
Frame = +2
Query: 29 NLYIKNIEDTIDDEKLKEIFSEFGLVLSCKVMKTPQGHXXXXXXXXXXXXDEASRAVNEL 208
N++ KN+ + + ++LKE+ ++G + + +M +G + A V
Sbjct: 189 NVFFKNLSEDVGPDQLKELLQQYGEITNITIMADDKGKSKGFGFANFESAEAAKNVVENE 248
Query: 209 NGKMVGSKPLYVAQAQKKEDRRARLQAHF 295
NGK+ KP+Y +AQKK +R A L+ F
Sbjct: 249 NGKIFHGKPIYAGRAQKKIEREAELKHTF 277
Score = 50.4 bits (119), Expect = 6e-06
Identities = 24/92 (26%), Positives = 47/92 (51%)
Frame = +2
Query: 29 NLYIKNIEDTIDDEKLKEIFSEFGLVLSCKVMKTPQGHXXXXXXXXXXXXDEASRAVNEL 208
N++IKN++ ID + L + FS FG +LSCKV+ + A +A+ ++
Sbjct: 99 NVFIKNLDKGIDHKALYDTFSAFGNILSCKVVTDDGNSSKGFGFVHYETQESADKAIAKV 158
Query: 209 NGKMVGSKPLYVAQAQKKEDRRARLQAHFAHM 304
NG M+ + ++V + ++R + F ++
Sbjct: 159 NGMMINGQKVFVGPFKSSKERGQPTEVKFTNV 190
>sp|Q4VXU2|PAP1L_HUMAN Polyadenylate-binding protein 1-like OS=Homo
sapiens GN=PABPC1L PE=2 SV=1
Length = 614
Score = 99.8 bits (247), Expect = 9e-21
Identities = 47/94 (50%), Positives = 71/94 (75%)
Frame = +2
Query: 2 ERVEKFQGVNLYIKNIEDTIDDEKLKEIFSEFGLVLSCKVMKTPQGHXXXXXXXXXXXXD 181
+R+ ++QGVNLY+KN++D+IDD+KL++ FS +G++ S KVM T GH +
Sbjct: 286 DRLRRYQGVNLYVKNLDDSIDDDKLRKEFSPYGVITSAKVM-TEGGHSKGFGFVCFSSPE 344
Query: 182 EASRAVNELNGKMVGSKPLYVAQAQKKEDRRARL 283
EA++AV E+NG++VG+KPLYVA AQ+KE+R+A L
Sbjct: 345 EATKAVTEMNGRIVGTKPLYVALAQRKEERKAIL 378
Score = 72.8 bits (177), Expect = 1e-12
Identities = 34/93 (36%), Positives = 56/93 (60%)
Frame = +2
Query: 29 NLYIKNIEDTIDDEKLKEIFSEFGLVLSCKVMKTPQGHXXXXXXXXXXXXDEASRAVNEL 208
N+Y+KN+ +D++ L+++FS+FG +LS KVM+ GH +EA +AV +
Sbjct: 192 NIYVKNLPVDVDEQGLQDLFSQFGKMLSVKVMRDNSGHSRCFGFVNFEKHEEAQKAVVHM 251
Query: 209 NGKMVGSKPLYVAQAQKKEDRRARLQAHFAHMR 307
NGK V + LY +AQK+ +R+ L+ F M+
Sbjct: 252 NGKEVSGRLLYAGRAQKRVERQNELKRRFEQMK 284
Score = 58.5 bits (140), Expect = 2e-08
Identities = 30/94 (31%), Positives = 50/94 (53%)
Frame = +2
Query: 29 NLYIKNIEDTIDDEKLKEIFSEFGLVLSCKVMKTPQGHXXXXXXXXXXXXDEASRAVNEL 208
N++IKN+ED+ID++ L + FS FG +LSCKV G + A +A+N +
Sbjct: 100 NIFIKNLEDSIDNKALYDTFSTFGNILSCKVACDEHG-SRGFGFVHFETHEAAQQAINTM 158
Query: 209 NGKMVGSKPLYVAQAQKKEDRRARLQAHFAHMRN 310
NG ++ + ++V + + +R A L A N
Sbjct: 159 NGMLLNDRKVFVGHFKSRREREAELGARALEFTN 192
>sp|Q6BI95|PABP_DEBHA Polyadenylate-binding protein, cytoplasmic and
nuclear OS=Debaryomyces hansenii GN=PAB1 PE=3 SV=2
Length = 627
Score = 99.8 bits (247), Expect = 9e-21
Identities = 64/188 (34%), Positives = 87/188 (46%), Gaps = 15/188 (7%)
Frame = +2
Query: 2 ERVEKFQGVNLYIKNIEDTIDDEKLKEIFSEFGLVLSCKVMKTPQGHXXXXXXXXXXXXD 181
E++ K+QGVNL+IKN++DTID EKL+E F FG + S +VM G +
Sbjct: 327 EKLSKYQGVNLFIKNLDDTIDSEKLEEEFKPFGSITSARVMVDETGKSKGFGFVCFSSPE 386
Query: 182 EASRAVNELNGKMVGSKPLYVAQAQKKEDRRARLQAHFAHMRNSXXXXXXXXXXXXXXXX 361
EA++A+ E+N +M+ KPLYVA AQ+K+ RR++L+ RN
Sbjct: 387 EATKAITEMNQRMIYGKPLYVALAQRKDVRRSQLEQQI-QARNQ------MRMQNAAATG 439
Query: 362 XXXXXXXQQVFYAQPPGMMPPQANGFG---------------YQHPMVAGVRPGAPQPPM 496
+FY Q PG PP G G P RPG P+
Sbjct: 440 GIPGQFIPPMFYGQQPGFFPPNGRGNGPFPGPNPQMMMPRGQIPPPQGQWPRPGPNGQPV 499
Query: 497 PNYFMPIV 520
P Y MP V
Sbjct: 500 PVYGMPPV 507
Score = 57.0 bits (136), Expect = 7e-08
Identities = 31/107 (28%), Positives = 55/107 (51%), Gaps = 5/107 (4%)
Frame = +2
Query: 2 ERVEKFQGV-----NLYIKNIEDTIDDEKLKEIFSEFGLVLSCKVMKTPQGHXXXXXXXX 166
+R KF+ + N+Y KNI+ +E+ K++F +G + S + K +G
Sbjct: 219 DRESKFEEMKANFTNVYAKNIDLDFSEEEFKKLFEAYGKITSIYLEKDHEGKSKGFGFVN 278
Query: 167 XXXXDEASRAVNELNGKMVGSKPLYVAQAQKKEDRRARLQAHFAHMR 307
+ A +AV+ELN K + + +YV +AQKK +R L+ + + R
Sbjct: 279 FENHESAVKAVDELNDKEINGQKIYVGRAQKKRERLEELKKQYENTR 325
Score = 56.6 bits (135), Expect = 9e-08
Identities = 27/94 (28%), Positives = 48/94 (51%)
Frame = +2
Query: 29 NLYIKNIEDTIDDEKLKEIFSEFGLVLSCKVMKTPQGHXXXXXXXXXXXXDEASRAVNEL 208
N++IKN+ ID++ L + F+ FG +LSCKV G + A A+ +
Sbjct: 140 NIFIKNLHPAIDNKALHDTFTAFGKILSCKVATDDMGISKCFGFVHYETAEAAEAAIENV 199
Query: 209 NGKMVGSKPLYVAQAQKKEDRRARLQAHFAHMRN 310
NG ++ + +YV + K+DR ++ + A+ N
Sbjct: 200 NGMLLNDREVYVGKHISKKDRESKFEEMKANFTN 233
>sp|A5DM21|PABP_PICGU Polyadenylate-binding protein, cytoplasmic and
nuclear OS=Pichia guilliermondii GN=PAB1 PE=3 SV=2
Length = 631
Score = 98.6 bits (244), Expect = 2e-20
Identities = 67/195 (34%), Positives = 92/195 (47%), Gaps = 2/195 (1%)
Frame = +2
Query: 2 ERVEKFQGVNLYIKNIEDTIDDEKLKEIFSEFGLVLSCKVMKTPQGHXXXXXXXXXXXXD 181
E++ K+QGVNL++KN++D+ID EKL+E F FG + S +VM G +
Sbjct: 334 EKLSKYQGVNLFVKNLDDSIDSEKLEEEFKPFGTITSARVMVDDAGKSKGFGFVCFSSPE 393
Query: 182 EASRAVNELNGKMVGSKPLYVAQAQKKEDRRARLQAHFAHMRNSXXXXXXXXXXXXXXXX 361
EA++A+ E+N +M+ KPLYVA AQ+K+ RR++L+ RN
Sbjct: 394 EATKAITEMNQRMIQGKPLYVALAQRKDVRRSQLEQQI-QARNQ------MRMQNAAAAA 446
Query: 362 XXXXXXXQQVFYAQPPGMMPPQANGFGYQHPMVAGVRPGAPQPPMPNYFMPIVQRPGQHQ 541
+FY Q PG PP G G Q P PP P MP R GQ
Sbjct: 447 GMPGQFMSPMFYGQQPGFFPPNGRG-GAQGPF----------PPNPQMMMP---RGGQMP 492
Query: 542 RSGNR--RAGGPTQP 580
+ RAG QP
Sbjct: 493 PPQGQWPRAGPNGQP 507
Score = 56.6 bits (135), Expect = 9e-08
Identities = 27/94 (28%), Positives = 47/94 (50%)
Frame = +2
Query: 29 NLYIKNIEDTIDDEKLKEIFSEFGLVLSCKVMKTPQGHXXXXXXXXXXXXDEASRAVNEL 208
N++IKN+ ID++ L + FS FG +LSCKV G + A A+ +
Sbjct: 147 NIFIKNLHPAIDNKALHDTFSAFGRILSCKVATDELGQSKCFGFVHYETAEAAEAAIENV 206
Query: 209 NGKMVGSKPLYVAQAQKKEDRRARLQAHFAHMRN 310
NG ++ + ++V + K DR ++ + A+ N
Sbjct: 207 NGMLLNDREVFVGKHVSKRDRESKFEEMKANFTN 240
Score = 56.6 bits (135), Expect = 9e-08
Identities = 33/107 (30%), Positives = 52/107 (48%), Gaps = 5/107 (4%)
Frame = +2
Query: 2 ERVEKFQGV-----NLYIKNIEDTIDDEKLKEIFSEFGLVLSCKVMKTPQGHXXXXXXXX 166
+R KF+ + N+Y+KN+ +D+ K +EIF FG V S + +G
Sbjct: 226 DRESKFEEMKANFTNVYVKNLAPEVDNAKFEEIFKPFGPVTSVHLETDQEGKSRGFGFVN 285
Query: 167 XXXXDEASRAVNELNGKMVGSKPLYVAQAQKKEDRRARLQAHFAHMR 307
+ A AV E+N K + + LYV +AQKK +R L+ + R
Sbjct: 286 FENHESALNAVKEMNDKEIDGQKLYVGRAQKKRERLDELKRLYESTR 332
Score = 32.0 bits (71), Expect = 2.3
Identities = 21/83 (25%), Positives = 37/83 (44%), Gaps = 1/83 (1%)
Frame = +2
Query: 29 NLYIKNIEDTIDDEKLKEIFSEFGLVLSCKVMK-TPQGHXXXXXXXXXXXXDEASRAVNE 205
+LY+ + ++++ L EIFS G V S +V + + SRA+ E
Sbjct: 59 SLYVGELNPSVNEALLFEIFSPIGQVSSIRVCRDAVTKKSLGYAYVNFHKHADGSRAIEE 118
Query: 206 LNGKMVGSKPLYVAQAQKKEDRR 274
LN +V +P + +Q+ R
Sbjct: 119 LNYSLVDGRPCRIMWSQRDPSLR 141
>sp|Q6CDH3|PABP_YARLI Polyadenylate-binding protein, cytoplasmic and
nuclear OS=Yarrowia lipolytica GN=PAB1 PE=3 SV=1
Length = 629
Score = 98.2 bits (243), Expect = 3e-20
Identities = 67/194 (34%), Positives = 89/194 (45%), Gaps = 2/194 (1%)
Frame = +2
Query: 2 ERVEKFQGVNLYIKNIEDTIDDEKLKEIFSEFGLVLSCKVMKTPQGHXXXXXXXXXXXXD 181
E++ K+QGVNLYIKN++DTIDD+KL+ F+ G + S KVM G +
Sbjct: 322 EKLNKYQGVNLYIKNLDDTIDDDKLRAEFAPHGTITSAKVMVDEAGKSKGFGFVCYSSPE 381
Query: 182 EASRAVNELNGKMVGSKPLYVAQAQKKEDRRARLQAHFAHMRNSXXXXXXXXXXXXXXXX 361
EA++AV E+N ++V KPLYV AQ+K+ RR++LQ
Sbjct: 382 EATKAVTEMNHRLVAGKPLYVVLAQRKDVRRSQLQQQIQAKNQMRLQQQAAAGGLPGQYM 441
Query: 362 XXXXXXXQQVFYAQPPGMMPPQANG--FGYQHPMVAGVRPGAPQPPMPNYFMPIVQRPGQ 535
VFY PG MPP G FG M+ +PPMP P Q P +
Sbjct: 442 GNPG-----VFYPGQPGFMPPGRGGMPFGANPQMMM-------RPPMP----PQNQFPPR 485
Query: 536 HQRSGNRRAGGPTQ 577
G G P Q
Sbjct: 486 GVPGGPNMYGAPPQ 499
Score = 55.5 bits (132), Expect = 2e-07
Identities = 26/81 (32%), Positives = 42/81 (51%)
Frame = +2
Query: 29 NLYIKNIEDTIDDEKLKEIFSEFGLVLSCKVMKTPQGHXXXXXXXXXXXXDEASRAVNEL 208
N+YIKN++ ID++ L + FS FG +LSCK+ G+ + A A+ +
Sbjct: 135 NIYIKNLDPAIDNKALHDTFSAFGQILSCKIATDEFGNSRGFGFVHYESAESAESAIQHV 194
Query: 209 NGKMVGSKPLYVAQAQKKEDR 271
NG ++ K ++V K DR
Sbjct: 195 NGMLLNDKKVFVGPHVPKSDR 215
Score = 36.6 bits (83), Expect = 0.094
Identities = 22/99 (22%), Positives = 44/99 (44%)
Frame = +2
Query: 11 EKFQGVNLYIKNIEDTIDDEKLKEIFSEFGLVLSCKVMKTPQGHXXXXXXXXXXXXDEAS 190
+K N++IKN+ I + + +E+ ++FG S + +G D A
Sbjct: 222 QKNSFTNVFIKNLGTEITEAEFEELVNKFGETSSVHLSTNDEGKPTGFGFVDYKEHDVAV 281
Query: 191 RAVNELNGKMVGSKPLYVAQAQKKEDRRARLQAHFAHMR 307
+A++ L+ L+ +A+KK +R L+ + R
Sbjct: 282 KAIDGLSETEFKGNKLFAGRAKKKYERADELRKQYEASR 320
|
| TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
| tr_hit_id |
Q94IQ3 |
| Definition |
tr|Q94IQ3|Q94IQ3_ANEPH Polyadenylated mRNA-binding protein 2 (Fragment) OS=Anemia phyllitidis |
| Align length |
192 |
| Score (bit) |
223.0 |
| E-value |
5.0e-57 |
| Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DK955279|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0022_K17, 5'
(583 letters)
Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
tr|Q94IQ3|Q94IQ3_ANEPH Polyadenylated mRNA-binding protein 2 (Fr... 223 5e-57
tr|Q39953|Q39953_ANEPH Poly(A)-mRNA binding protein OS=Anemia ph... 197 4e-49
tr|Q9AT32|Q9AT32_DAUCA Poly(A)-binding protein OS=Daucus carota ... 189 1e-46
tr|Q9M6E4|Q9M6E4_TOBAC Poly(A)-binding protein (Fragment) OS=Nic... 189 1e-46
tr|A5B5N0|A5B5N0_VITVI Putative uncharacterized protein (Chromos... 186 8e-46
tr|A7PLE6|A7PLE6_VITVI Chromosome chr7 scaffold_20, whole genome... 184 4e-45
tr|A9PEX9|A9PEX9_POPTR Putative uncharacterized protein OS=Popul... 182 2e-44
tr|Q9M6E6|Q9M6E6_TOBAC Poly(A)-binding protein OS=Nicotiana taba... 180 6e-44
tr|A5BR81|A5BR81_VITVI Putative uncharacterized protein (Chromos... 178 2e-43
tr|P93616|P93616_WHEAT Poly(A)-binding protein OS=Triticum aesti... 171 2e-41
tr|Q9M549|Q9M549_CUCSA Poly(A)-binding protein OS=Cucumis sativu... 167 4e-40
tr|A9TLC5|A9TLC5_PHYPA Predicted protein OS=Physcomitrella paten... 165 2e-39
tr|Q6YYV1|Q6YYV1_ORYSJ Os09g0115400 protein OS=Oryza sativa subs... 164 3e-39
tr|A9SVZ7|A9SVZ7_PHYPA Predicted protein OS=Physcomitrella paten... 164 3e-39
tr|A2YYH2|A2YYH2_ORYSI Putative uncharacterized protein OS=Oryza... 164 3e-39
tr|B7FM14|B7FM14_MEDTR Putative uncharacterized protein (Fragmen... 163 6e-39
tr|A7QRL0|A7QRL0_VITVI Chromosome undetermined scaffold_151, who... 159 1e-37
tr|Q9FXA2|Q9FXA2_ARATH Putative Poly-A Binding Protein OS=Arabid... 156 7e-37
tr|B6U4M0|B6U4M0_MAIZE Polyadenylate-binding protein 2 OS=Zea ma... 156 7e-37
tr|A5C9H4|A5C9H4_VITVI Putative uncharacterized protein OS=Vitis... 156 7e-37
tr|Q8RXR5|Q8RXR5_ARATH Putative poly(A)-binding protein (Fragmen... 156 9e-37
tr|Q9M6E5|Q9M6E5_TOBAC Poly(A)-binding protein (Fragment) OS=Nic... 154 3e-36
tr|Q6Z050|Q6Z050_ORYSJ Os08g0314800 protein OS=Oryza sativa subs... 154 3e-36
tr|Q7F8Y1|Q7F8Y1_ORYSJ Os04g0504800 protein OS=Oryza sativa subs... 153 8e-36
tr|A9TPK9|A9TPK9_PHYPA Predicted protein OS=Physcomitrella paten... 152 2e-35
tr|Q00M91|Q00M91_SOYBN Poly(A)-binding protein OS=Glycine max PE... 151 2e-35
tr|B8ARD0|B8ARD0_ORYSI Putative uncharacterized protein OS=Oryza... 151 2e-35
tr|Q9C5J0|Q9C5J0_ARATH Putative poly(A) binding protein OS=Arabi... 150 5e-35
tr|O22173|O22173_ARATH Putative poly(A) binding protein OS=Arabi... 150 5e-35
tr|Q7X675|Q7X675_ORYSA OSJNBa0014K14.19 protein OS=Oryza sativa ... 138 2e-31
>tr|Q94IQ3|Q94IQ3_ANEPH Polyadenylated mRNA-binding protein 2
(Fragment) OS=Anemia phyllitidis GN=Pab2 PE=2 SV=1
Length = 472
Score = 223 bits (569), Expect = 5e-57
Identities = 114/192 (59%), Positives = 134/192 (69%), Gaps = 2/192 (1%)
Frame = +2
Query: 2 ERVEKFQGVNLYIKNIEDTIDDEKLKEIFSEFGLVLSCKVMKTPQGHXXXXXXXXXXXXD 181
ER EKFQGVNLY+KN++D+IDDEKLKE+FS FG V SCK+M++PQG D
Sbjct: 125 ERTEKFQGVNLYLKNVDDSIDDEKLKELFSGFGTVNSCKIMRSPQGQIVGSGFVALSSKD 184
Query: 182 EASRAVNELNGKMVGSKPLYVAQAQKKEDRRARLQAHFAHMRNSXXXXXXXXXXXXXXXX 361
EA RAVNE+NGKMVGSKPLYVA AQ+K++RRA+LQA FA +RN
Sbjct: 185 EAMRAVNEMNGKMVGSKPLYVAVAQRKDERRAKLQAQFAQLRNVVANVPQMNGSPGPLYP 244
Query: 362 XXXXXXXQQVFYAQPP-GMMPPQANGFGYQHPMVAGVRPGAPQPPMPNYFMPIVQRPGQH 538
QQV+Y QPP G++PPQ +GFGYQHPMV G+RPG PQ MPNYF+P VQRPGQ
Sbjct: 245 PRPPAMGQQVYYGQPPHGLLPPQPSGFGYQHPMVPGMRPGGPQ--MPNYFLPAVQRPGQQ 302
Query: 539 -QRSGNRRAGGP 571
QR GNRR G P
Sbjct: 303 GQRMGNRRPGPP 314
Score = 68.9 bits (167), Expect = 2e-10
Identities = 33/93 (35%), Positives = 51/93 (54%)
Frame = +2
Query: 29 NLYIKNIEDTIDDEKLKEIFSEFGLVLSCKVMKTPQGHXXXXXXXXXXXXDEASRAVNEL 208
N+++KN+ + DE L E+F FG + S VM+ G+ D+A++AV +
Sbjct: 31 NVFVKNLAEETTDEDLMEVFGGFGPISSAVVMRDANGNSKCFGFVNFKNADDAAKAVENI 90
Query: 209 NGKMVGSKPLYVAQAQKKEDRRARLQAHFAHMR 307
NGK+ K YV +AQKK +R A L+ F +R
Sbjct: 91 NGKVFNDKEWYVGRAQKKSEREAELKVKFEQLR 123
>tr|Q39953|Q39953_ANEPH Poly(A)-mRNA binding protein OS=Anemia
phyllitidis PE=2 SV=1
Length = 638
Score = 197 bits (501), Expect = 4e-49
Identities = 110/197 (55%), Positives = 130/197 (65%), Gaps = 3/197 (1%)
Frame = +2
Query: 2 ERVEKFQGVNLYIKNIEDTIDDEKLKEIFSEFGLVLSCKVMKTPQGHXXXXXXXXXXXXD 181
E+ EKFQGVNLY+KNI+D+IDDEKL+E+F+ FG V SCKVMK+PQG +
Sbjct: 299 EKEEKFQGVNLYLKNIDDSIDDEKLRELFAVFGTVTSCKVMKSPQGQSMGSGFVTFSAPE 358
Query: 182 EASRAVNELNGKMVGSKPLYVAQAQKKEDRRARLQAHFAHMRNSXXXXXXXXXXXXXXXX 361
EA +AVN++NGKMVGSKPLYVA AQ+KE+RRARLQA FA M+
Sbjct: 359 EAMQAVNDMNGKMVGSKPLYVALAQRKEERRARLQAQFAQMQIVAPNAPPMAPNPPSMYH 418
Query: 362 XXXXXXXQQVFYAQP-PGMMPPQANGFGYQHPMVAGVRPGAPQPPMPNYFMPIVQRPGQH 538
Q+FY QP PG++P QANGFGYQ PMV +RP +PNYFMP VQRPGQ
Sbjct: 419 PGPQGMGHQMFYGQPAPGLLPSQANGFGYQQPMVPTMRP--TSAGVPNYFMP-VQRPGQQ 475
Query: 539 -QRSGNRRAG-GPTQPQ 583
QR NRR G GP QPQ
Sbjct: 476 IQRPVNRRGGVGPLQPQ 492
Score = 73.2 bits (178), Expect = 1e-11
Identities = 35/93 (37%), Positives = 53/93 (56%)
Frame = +2
Query: 29 NLYIKNIEDTIDDEKLKEIFSEFGLVLSCKVMKTPQGHXXXXXXXXXXXXDEASRAVNEL 208
N+Y+KN+ + DE L+++F+ FG + S VM+ G D+A+ AV L
Sbjct: 205 NVYVKNLAEATTDEDLRKVFAGFGPISSAVVMRDADGKSKCFGFVNFENVDDAANAVENL 264
Query: 209 NGKMVGSKPLYVAQAQKKEDRRARLQAHFAHMR 307
NGK++ K YV +AQKK +R A L+A F +R
Sbjct: 265 NGKLINEKEWYVGRAQKKSEREAELKAKFEQVR 297
Score = 57.0 bits (136), Expect = 8e-07
Identities = 26/88 (29%), Positives = 49/88 (55%)
Frame = +2
Query: 8 VEKFQGVNLYIKNIEDTIDDEKLKEIFSEFGLVLSCKVMKTPQGHXXXXXXXXXXXXDEA 187
+ K N++IKN+E +ID++ L + FS FG +LSC+V+ G+ + A
Sbjct: 108 IRKSGAANIFIKNLEKSIDNKALHDTFSAFGTILSCRVVMDDAGNSKGYGFVQFEKEESA 167
Query: 188 SRAVNELNGKMVGSKPLYVAQAQKKEDR 271
A+ ++NG ++ + + VA +K++R
Sbjct: 168 QIAIEKVNGMLINDRQVSVAPFIRKQER 195
>tr|Q9AT32|Q9AT32_DAUCA Poly(A)-binding protein OS=Daucus carota
PE=2 SV=1
Length = 658
Score = 189 bits (480), Expect = 1e-46
Identities = 102/193 (52%), Positives = 126/193 (65%), Gaps = 1/193 (0%)
Frame = +2
Query: 2 ERVEKFQGVNLYIKNIEDTIDDEKLKEIFSEFGLVLSCKVMKTPQGHXXXXXXXXXXXXD 181
E+V+K+QGVNLY+KN++DTIDDEKLKE+FSE+G + SCKVM+ P G +
Sbjct: 314 EQVDKYQGVNLYVKNLDDTIDDEKLKELFSEYGTITSCKVMRDPSGISRGSGFVAFSTPE 373
Query: 182 EASRAVNELNGKMVGSKPLYVAQAQKKEDRRARLQAHFAHMRNSXXXXXXXXXXXXXXXX 361
EASRA+ E+NGKM+ SKPLYVA AQ+KE+RRARLQA F+ MR
Sbjct: 374 EASRALGEMNGKMIVSKPLYVALAQRKEERRARLQAQFSQMR--PVAMPPSMGPRMPMYS 431
Query: 362 XXXXXXXQQVFYAQ-PPGMMPPQANGFGYQHPMVAGVRPGAPQPPMPNYFMPIVQRPGQH 538
QQ+FY Q PP M+ PQA GFGYQ +V G+RPG PMPN+FMP+VQ+ Q
Sbjct: 432 PGAPGMGQQLFYGQAPPAMIAPQA-GFGYQQQLVPGMRPGG--GPMPNFFMPMVQQGQQG 488
Query: 539 QRSGNRRAGGPTQ 577
QR G RR GP Q
Sbjct: 489 QRPGGRRGAGPAQ 501
Score = 65.9 bits (159), Expect = 2e-09
Identities = 30/89 (33%), Positives = 50/89 (56%)
Frame = +2
Query: 29 NLYIKNIEDTIDDEKLKEIFSEFGLVLSCKVMKTPQGHXXXXXXXXXXXXDEASRAVNEL 208
N+Y+KN+ D+ ++ L++ F E+G + S VM+ G ++A++AV+ L
Sbjct: 220 NIYVKNLSDSTSEDDLRKTFGEYGTITSVVVMRDADGKSKCFGFVNFENPEDAAKAVDAL 279
Query: 209 NGKMVGSKPLYVAQAQKKEDRRARLQAHF 295
NGK K YV +AQKK +R L++ F
Sbjct: 280 NGKKFDDKEWYVGKAQKKSEREVELKSRF 308
Score = 59.7 bits (143), Expect = 1e-07
Identities = 27/85 (31%), Positives = 47/85 (55%)
Frame = +2
Query: 29 NLYIKNIEDTIDDEKLKEIFSEFGLVLSCKVMKTPQGHXXXXXXXXXXXXDEASRAVNEL 208
N++IKN++ +ID + L E FS FG ++SCK+ G + A A+++L
Sbjct: 129 NIFIKNLDKSIDIKALHETFSSFGTIISCKIATDASGQSKGYGFVQYDSEEAAQTAIDKL 188
Query: 209 NGKMVGSKPLYVAQAQKKEDRRARL 283
NG ++ K +YV +K+DR + +
Sbjct: 189 NGMLMNDKQVYVGVFLRKQDRDSEM 213
>tr|Q9M6E4|Q9M6E4_TOBAC Poly(A)-binding protein (Fragment)
OS=Nicotiana tabacum GN=PABP PE=2 SV=1
Length = 479
Score = 189 bits (479), Expect = 1e-46
Identities = 100/193 (51%), Positives = 127/193 (65%), Gaps = 1/193 (0%)
Frame = +2
Query: 2 ERVEKFQGVNLYIKNIEDTIDDEKLKEIFSEFGLVLSCKVMKTPQGHXXXXXXXXXXXXD 181
E V+K+QG+NLY+KN++DTIDDEKLKE+FSEFG + SCKVM+ P G +
Sbjct: 134 EAVDKYQGLNLYVKNLDDTIDDEKLKELFSEFGTITSCKVMRDPSGISRGSGFVAFSTSE 193
Query: 182 EASRAVNELNGKMVGSKPLYVAQAQKKEDRRARLQAHFAHMRNSXXXXXXXXXXXXXXXX 361
EASRA++E+NGKM+ SKPLYVA AQ+KE+RRA+L+A F+ +R
Sbjct: 194 EASRALSEMNGKMIVSKPLYVALAQRKEERRAKLRAQFSQLR--PVAMPPSLAPRMPIYP 251
Query: 362 XXXXXXXQQVFYAQ-PPGMMPPQANGFGYQHPMVAGVRPGAPQPPMPNYFMPIVQRPGQH 538
QQ+FY Q PP M+PPQA GFGYQ +V G+RPG PMPN+FMP+VQ+ Q
Sbjct: 252 PGAPGIGQQLFYGQGPPAMIPPQA-GFGYQQQLVPGMRPGG--APMPNFFMPLVQQGQQG 308
Query: 539 QRSGNRRAGGPTQ 577
QR G RR GP Q
Sbjct: 309 QRPGGRRGAGPVQ 321
Score = 68.6 bits (166), Expect = 3e-10
Identities = 35/94 (37%), Positives = 53/94 (56%)
Frame = +2
Query: 14 KFQGVNLYIKNIEDTIDDEKLKEIFSEFGLVLSCKVMKTPQGHXXXXXXXXXXXXDEASR 193
KFQ N+Y+KN+ ++ D+ LK++F EFG + S VM+ G ++A++
Sbjct: 37 KFQ--NVYVKNLSESTTDDGLKKVFGEFGNITSAVVMRDADGKSKCFGFINFETAEDAAK 94
Query: 194 AVNELNGKMVGSKPLYVAQAQKKEDRRARLQAHF 295
AV LNGK K YV +AQKK +R L++ F
Sbjct: 95 AVESLNGKKFDDKEWYVGKAQKKSEREQELKSKF 128
>tr|A5B5N0|A5B5N0_VITVI Putative uncharacterized protein (Chromosome
chr18 scaffold_1, whole genome shotgun sequence)
OS=Vitis vinifera GN=GSVIVT00014861001 PE=4 SV=1
Length = 640
Score = 186 bits (472), Expect = 8e-46
Identities = 102/193 (52%), Positives = 125/193 (64%), Gaps = 1/193 (0%)
Frame = +2
Query: 2 ERVEKFQGVNLYIKNIEDTIDDEKLKEIFSEFGLVLSCKVMKTPQGHXXXXXXXXXXXXD 181
E V+KFQGVNLYIKN++D+I D+KLKE+FSEFG + SCKVM+ P G +
Sbjct: 292 EVVDKFQGVNLYIKNLDDSIGDDKLKELFSEFGTITSCKVMRDPSGISRGSGFVAFSTSE 351
Query: 182 EASRAVNELNGKMVGSKPLYVAQAQKKEDRRARLQAHFAHMRNSXXXXXXXXXXXXXXXX 361
EASRA+ E+NGKMV SKPLYVA AQ+KE+RRARLQA F+ MR
Sbjct: 352 EASRALTEMNGKMVVSKPLYVALAQRKEERRARLQAQFSQMR--PVSMAPSVAPRMPMYP 409
Query: 362 XXXXXXXQQVFYAQ-PPGMMPPQANGFGYQHPMVAGVRPGAPQPPMPNYFMPIVQRPGQH 538
QQ+FY Q PP ++PPQA GFGYQ +V G+RPG PMPN+F+P+VQ+ Q
Sbjct: 410 PGAPGLGQQLFYGQGPPAIIPPQA-GFGYQQQLVPGMRPGG--APMPNFFVPLVQQGQQG 466
Query: 539 QRSGNRRAGGPTQ 577
QR G RR GP Q
Sbjct: 467 QRPGGRRGAGPVQ 479
Score = 68.2 bits (165), Expect = 3e-10
Identities = 34/89 (38%), Positives = 48/89 (53%)
Frame = +2
Query: 29 NLYIKNIEDTIDDEKLKEIFSEFGLVLSCKVMKTPQGHXXXXXXXXXXXXDEASRAVNEL 208
N+Y+KN+ ++ +E LK IF EFG++ S VM+ G D+A+ AV L
Sbjct: 198 NVYVKNLSESTTEEDLKNIFGEFGIITSVVVMRDGDGKSKCFGFVNFENADDAAEAVEAL 257
Query: 209 NGKMVGSKPLYVAQAQKKEDRRARLQAHF 295
NGK K YV +AQKK +R L+ F
Sbjct: 258 NGKKFDEKEWYVGKAQKKYERELELKGRF 286
Score = 67.0 bits (162), Expect = 7e-10
Identities = 30/92 (32%), Positives = 51/92 (55%)
Frame = +2
Query: 8 VEKFQGVNLYIKNIEDTIDDEKLKEIFSEFGLVLSCKVMKTPQGHXXXXXXXXXXXXDEA 187
+ K N++IKN++ +ID++ L + FS FG +LSCK+ P G + A
Sbjct: 100 IRKSGTANIFIKNLDKSIDNKALHDTFSAFGNILSCKIATDPSGQSKGYGFVQFDNEESA 159
Query: 188 SRAVNELNGKMVGSKPLYVAQAQKKEDRRARL 283
A+++LNG ++ K +YV Q +K++R L
Sbjct: 160 QNAIDKLNGMLINDKQVYVGQFLRKQERETAL 191
>tr|A7PLE6|A7PLE6_VITVI Chromosome chr7 scaffold_20, whole genome
shotgun sequence OS=Vitis vinifera GN=GSVIVT00019539001
PE=4 SV=1
Length = 654
Score = 184 bits (466), Expect = 4e-45
Identities = 103/195 (52%), Positives = 131/195 (67%), Gaps = 3/195 (1%)
Frame = +2
Query: 2 ERVEKFQGVNLYIKNIEDTIDDEKLKEIFSEFGLVLSCKVMKTPQGHXXXXXXXXXXXXD 181
E V+KFQG+NLY+KN++D+I D+KL+E+FSEFG + SCKVM+ P G +
Sbjct: 306 EAVDKFQGLNLYVKNLDDSIADDKLRELFSEFGTITSCKVMRDPNGISRGSGFVAFSTAE 365
Query: 182 EASRAVNELNGKMVGSKPLYVAQAQKKEDRRARLQAHFAHMRNSXXXXXXXXXXXXXXXX 361
EASRA+ ++NGKMV SKPLYVA AQ+KEDRRARLQA F+ MR +
Sbjct: 366 EASRALADMNGKMVASKPLYVALAQRKEDRRARLQAQFSQMRPA--AMAPSVGPRMSMYP 423
Query: 362 XXXXXXXQQVFYAQ-PPGMMPPQANGFGYQHPMVAGVRPGAPQPPMPNYFMPIVQRPGQ- 535
QQ+FY Q PP ++PPQ GFGYQH +V G+RPGA PMPN+F+P+VQ PGQ
Sbjct: 424 PGAPGLGQQLFYGQGPPALIPPQP-GFGYQHQLVPGMRPGA--APMPNFFVPMVQ-PGQP 479
Query: 536 HQRSGNRRAG-GPTQ 577
+QR G RR+G GP Q
Sbjct: 480 NQRPGGRRSGTGPVQ 494
Score = 67.0 bits (162), Expect = 7e-10
Identities = 34/89 (38%), Positives = 48/89 (53%)
Frame = +2
Query: 29 NLYIKNIEDTIDDEKLKEIFSEFGLVLSCKVMKTPQGHXXXXXXXXXXXXDEASRAVNEL 208
N+Y+KN+ ++ DE LK IF E+G + S VM+ G D+A+R+V L
Sbjct: 212 NVYVKNLLESTTDEDLKNIFGEYGPITSAVVMQDGDGKSKCFGFVNFENADDAARSVEAL 271
Query: 209 NGKMVGSKPLYVAQAQKKEDRRARLQAHF 295
NGK K YV +AQKK +R L+ F
Sbjct: 272 NGKKFDDKEWYVGKAQKKTEREVELKGRF 300
Score = 58.2 bits (139), Expect = 3e-07
Identities = 26/83 (31%), Positives = 45/83 (54%)
Frame = +2
Query: 29 NLYIKNIEDTIDDEKLKEIFSEFGLVLSCKVMKTPQGHXXXXXXXXXXXXDEASRAVNEL 208
N++IKN++ ID++ L + FS FG +LSCK+ G + A A ++L
Sbjct: 121 NIFIKNLDKAIDNKALYDTFSTFGAILSCKIATDASGQSKGYGFVQFDNEESAKNATDKL 180
Query: 209 NGKMVGSKPLYVAQAQKKEDRRA 277
NG ++ K +YV +K++R +
Sbjct: 181 NGMLLNDKQVYVGPFVRKQERES 203
>tr|A9PEX9|A9PEX9_POPTR Putative uncharacterized protein OS=Populus
trichocarpa PE=2 SV=1
Length = 408
Score = 182 bits (461), Expect = 2e-44
Identities = 101/195 (51%), Positives = 122/195 (62%), Gaps = 1/195 (0%)
Frame = +2
Query: 2 ERVEKFQGVNLYIKNIEDTIDDEKLKEIFSEFGLVLSCKVMKTPQGHXXXXXXXXXXXXD 181
E +KFQG NLYIKN++D+I DEK+KE+FS FG + SCKVM+ P G +
Sbjct: 64 EAADKFQGANLYIKNLDDSIGDEKIKELFSPFGTITSCKVMRDPNGISRGSGFVAFSTPE 123
Query: 182 EASRAVNELNGKMVGSKPLYVAQAQKKEDRRARLQAHFAHMRNSXXXXXXXXXXXXXXXX 361
EASRA+ E+NGKMV SKPLYVA AQ+KEDRRARLQA F+ MR
Sbjct: 124 EASRALLEMNGKMVASKPLYVALAQRKEDRRARLQAQFSQMR---PVAMAPSVGRMPMYP 180
Query: 362 XXXXXXXQQVFYAQ-PPGMMPPQANGFGYQHPMVAGVRPGAPQPPMPNYFMPIVQRPGQH 538
QQ+FY Q PP +MPPQ GFGYQ +V G+RPG PMPN+F+P+VQ+ Q
Sbjct: 181 PTGPGLGQQIFYGQGPPAIMPPQP-GFGYQQQLVPGMRPGG--APMPNFFVPMVQQGQQG 237
Query: 539 QRSGNRRAGGPTQPQ 583
QR G RRAG Q Q
Sbjct: 238 QRPGGRRAGTGQQSQ 252
Score = 35.4 bits (80), Expect = 2.4
Identities = 16/39 (41%), Positives = 23/39 (58%)
Frame = +2
Query: 179 DEASRAVNELNGKMVGSKPLYVAQAQKKEDRRARLQAHF 295
D+A++A LNGK K +V +AQKK +R L+ F
Sbjct: 20 DDAAKAAEALNGKKFDDKEWFVGKAQKKYEREVELKQRF 58
>tr|Q9M6E6|Q9M6E6_TOBAC Poly(A)-binding protein OS=Nicotiana tabacum
GN=PABP PE=2 SV=1
Length = 649
Score = 180 bits (456), Expect = 6e-44
Identities = 99/189 (52%), Positives = 122/189 (64%), Gaps = 1/189 (0%)
Frame = +2
Query: 2 ERVEKFQGVNLYIKNIEDTIDDEKLKEIFSEFGLVLSCKVMKTPQGHXXXXXXXXXXXXD 181
E V+K QG+NLYIKN++D+I DEKLKE+FS +G + SCKVM+ P G +
Sbjct: 301 EAVDKSQGLNLYIKNLDDSISDEKLKELFSPYGTITSCKVMRDPSGVSKGSGFVAFSNPE 360
Query: 182 EASRAVNELNGKMVGSKPLYVAQAQKKEDRRARLQAHFAHMRNSXXXXXXXXXXXXXXXX 361
EASRA++E+NGKMV SKPLYVA AQ+KE+RRARLQA F+ MR
Sbjct: 361 EASRALSEMNGKMVVSKPLYVALAQRKEERRARLQAQFSQMR--PIAMASSVAPRMPMYP 418
Query: 362 XXXXXXXQQVFYAQP-PGMMPPQANGFGYQHPMVAGVRPGAPQPPMPNYFMPIVQRPGQH 538
QQ+FY QP P M+PPQA GFGYQ +V G+RPG PMPN+FMP+VQ+ Q
Sbjct: 419 PGGPGLGQQIFYGQPQPAMLPPQA-GFGYQQQLVPGMRPGG--GPMPNFFMPMVQQGQQG 475
Query: 539 QRSGNRRAG 565
QR G RR G
Sbjct: 476 QRPGGRRGG 484
Score = 66.2 bits (160), Expect = 1e-09
Identities = 33/96 (34%), Positives = 55/96 (57%)
Frame = +2
Query: 8 VEKFQGVNLYIKNIEDTIDDEKLKEIFSEFGLVLSCKVMKTPQGHXXXXXXXXXXXXDEA 187
V+K + N+++KN+ ++ +E+L++IF EFG + S VMK G ++A
Sbjct: 200 VDKTRFTNVFVKNLSESTLEEELRKIFGEFGAITSVAVMKDEDGKSRCFGFVNFENAEDA 259
Query: 188 SRAVNELNGKMVGSKPLYVAQAQKKEDRRARLQAHF 295
+RAV LNG + +K +V +AQKK +R L+ F
Sbjct: 260 ARAVEALNGYKLDNKDWFVGRAQKKSEREMELKHRF 295
Score = 57.0 bits (136), Expect = 8e-07
Identities = 27/81 (33%), Positives = 43/81 (53%)
Frame = +2
Query: 29 NLYIKNIEDTIDDEKLKEIFSEFGLVLSCKVMKTPQGHXXXXXXXXXXXXDEASRAVNEL 208
N++IKN++ ID + L + FS FG +LSCKV G + A +A+ +L
Sbjct: 116 NIFIKNLDKAIDHKALHDTFSAFGNILSCKVAVDSSGQSKGYGFVQYDSEEAAQKAIEKL 175
Query: 209 NGKMVGSKPLYVAQAQKKEDR 271
NG ++ K +YV +K +R
Sbjct: 176 NGMLLNDKQVYVGPFVRKHER 196
>tr|A5BR81|A5BR81_VITVI Putative uncharacterized protein (Chromosome
chr3 scaffold_8, whole genome shotgun sequence) OS=Vitis
vinifera GN=GSVIVT00036627001 PE=4 SV=1
Length = 648
Score = 178 bits (452), Expect = 2e-43
Identities = 99/195 (50%), Positives = 122/195 (62%), Gaps = 1/195 (0%)
Frame = +2
Query: 2 ERVEKFQGVNLYIKNIEDTIDDEKLKEIFSEFGLVLSCKVMKTPQGHXXXXXXXXXXXXD 181
E V+KFQG NLYIKN++D+I D+KLKE+F++FG + SCKVM+ P G +
Sbjct: 304 EAVDKFQGANLYIKNLDDSIGDDKLKELFAQFGTITSCKVMRDPNGLSRGSGFVAFSSPE 363
Query: 182 EASRAVNELNGKMVGSKPLYVAQAQKKEDRRARLQAHFAHMRNSXXXXXXXXXXXXXXXX 361
EASRA+ E+N KMV SKPLYVA AQ+KEDRRARLQA F+ MR
Sbjct: 364 EASRALAEMNSKMVVSKPLYVALAQRKEDRRARLQAQFSQMR--PVPMPPSVVPRLPMYP 421
Query: 362 XXXXXXXQQVFYAQ-PPGMMPPQANGFGYQHPMVAGVRPGAPQPPMPNYFMPIVQRPGQH 538
QQ+FY Q PP ++PPQ GFGYQ +V G+RP PPMPN+F+PIVQ+ Q
Sbjct: 422 PSGPGLGQQMFYGQAPPAIIPPQP-GFGYQQQLVPGMRPAG--PPMPNFFVPIVQQGQQG 478
Query: 539 QRSGNRRAGGPTQPQ 583
QR G RRAG Q
Sbjct: 479 QRPGGRRAGAVPMQQ 493
Score = 62.0 bits (149), Expect = 2e-08
Identities = 34/95 (35%), Positives = 50/95 (52%)
Frame = +2
Query: 11 EKFQGVNLYIKNIEDTIDDEKLKEIFSEFGLVLSCKVMKTPQGHXXXXXXXXXXXXDEAS 190
EKF N+++KNI + + +E L IF EFG + S VM+ G D+A+
Sbjct: 206 EKFN--NVFVKNISEGMTEEDLTRIFGEFGPITSVVVMRDGDGKSKCFGFVNFENVDDAA 263
Query: 191 RAVNELNGKMVGSKPLYVAQAQKKEDRRARLQAHF 295
+V LNG+ K YV +AQKK +R L++ F
Sbjct: 264 MSVEALNGQKFDDKEWYVGKAQKKSEREIELKSRF 298
Score = 56.2 bits (134), Expect = 1e-06
Identities = 26/85 (30%), Positives = 47/85 (55%)
Frame = +2
Query: 29 NLYIKNIEDTIDDEKLKEIFSEFGLVLSCKVMKTPQGHXXXXXXXXXXXXDEASRAVNEL 208
N++IKN++ ID + L + FS FG +LSCKV G + A +A+++L
Sbjct: 119 NIFIKNLDKGIDHKALHDTFSAFGNILSCKVATDASGMSKGHGFVQFDSEEAAQKAIDKL 178
Query: 209 NGKMVGSKPLYVAQAQKKEDRRARL 283
NG ++ K ++V +K++R + +
Sbjct: 179 NGMLLNDKQVFVGPFVRKQERESTI 203
Score = 34.3 bits (77), Expect = 5.2
Identities = 19/83 (22%), Positives = 42/83 (50%), Gaps = 1/83 (1%)
Frame = +2
Query: 14 KFQGVNLYIKNIEDTIDDEKLKEIFSEFGLVLSCKVMK-TPQGHXXXXXXXXXXXXDEAS 190
+F +LY+ ++E ++D +L ++FS+ G V+S +V + +A+
Sbjct: 26 QFVTTSLYVGDLELNVNDSQLYDLFSQMGAVVSVRVCRDLSTRRSLGYGYVNYSNPQDAA 85
Query: 191 RAVNELNGKMVGSKPLYVAQAQK 259
RA++ LN + KP+ + + +
Sbjct: 86 RALDVLNFTPLNGKPIRIMYSHR 108
>tr|P93616|P93616_WHEAT Poly(A)-binding protein OS=Triticum aestivum
GN=wheatpab PE=1 SV=1
Length = 651
Score = 171 bits (434), Expect = 2e-41
Identities = 90/188 (47%), Positives = 116/188 (61%)
Frame = +2
Query: 2 ERVEKFQGVNLYIKNIEDTIDDEKLKEIFSEFGLVLSCKVMKTPQGHXXXXXXXXXXXXD 181
E +K+Q NLY+KN++DT+DDEKL+E+F+EFG + SCKVM+ G D
Sbjct: 306 EAADKYQNTNLYLKNLDDTVDDEKLRELFAEFGTITSCKVMRDSNGASRGSGFVAFKSAD 365
Query: 182 EASRAVNELNGKMVGSKPLYVAQAQKKEDRRARLQAHFAHMRNSXXXXXXXXXXXXXXXX 361
+ASRA+ E+N KMVG+KPLYVA AQ+KEDR+ARLQA F+ MR
Sbjct: 366 DASRALAEMNNKMVGNKPLYVALAQRKEDRKARLQAQFSQMR---PVPMAQTVGPRMQML 422
Query: 362 XXXXXXXQQVFYAQPPGMMPPQANGFGYQHPMVAGVRPGAPQPPMPNYFMPIVQRPGQHQ 541
QQ+FY QPP + PQ GFG+Q P + G+RPG PMPN+ MP+VQ+ Q Q
Sbjct: 423 PPGVPVGQQMFYGQPPAFINPQP-GFGFQQPFMPGMRPGG--APMPNFMMPMVQQGQQPQ 479
Query: 542 RSGNRRAG 565
R RRAG
Sbjct: 480 RPAGRRAG 487
Score = 69.7 bits (169), Expect = 1e-10
Identities = 35/89 (39%), Positives = 49/89 (55%)
Frame = +2
Query: 29 NLYIKNIEDTIDDEKLKEIFSEFGLVLSCKVMKTPQGHXXXXXXXXXXXXDEASRAVNEL 208
N+Y+KN+ +T ++ LKEIF +FG + S VM+ G DEA+ AV +L
Sbjct: 212 NVYVKNLAETTTEDDLKEIFGKFGAITSVVVMRDGDGRSKCFGFVNFESPDEAALAVQDL 271
Query: 209 NGKMVGSKPLYVAQAQKKEDRRARLQAHF 295
NGK K YV +AQKK +R L+ F
Sbjct: 272 NGKKFSDKEWYVGRAQKKSEREIELKEKF 300
Score = 57.8 bits (138), Expect = 4e-07
Identities = 27/81 (33%), Positives = 45/81 (55%)
Frame = +2
Query: 29 NLYIKNIEDTIDDEKLKEIFSEFGLVLSCKVMKTPQGHXXXXXXXXXXXXDEASRAVNEL 208
N++IKN++ +ID++ L + F FG +LSCKV P G + A A+ +L
Sbjct: 121 NIFIKNLDKSIDNKALYDTFCVFGNILSCKVATDPAGESKGYGFVQYERDEAAHAAIEKL 180
Query: 209 NGKMVGSKPLYVAQAQKKEDR 271
NG ++ K +YV +K++R
Sbjct: 181 NGMLMNDKKVYVGPFVRKQER 201
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