DK955283 |
Clone id |
TST39A01NGRL0022_K21 |
Library |
TST39 |
Length |
558 |
Definition |
Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0022_K21. 5' end sequence. |
Accession |
DK955283 |
Tissue type |
prothallia with plantlets |
Developmental stage |
gametophytes with sporophytes |
Contig ID |
CL140Contig1 |
Sequence |
CATCATTTCTGTCGATCTGTTGTTCTAGGCACCGCTTTGCTTTTCAGCTCACGATTTCTG TTAATCTCTTGTCCTGGGTACTGCCCTCTTCCCTGTCTGCAGAGTGTGGGCGCCTCTTGA TAGAGCAGGACCCCTTGTTGTCCCTGTTTGTGCGTGTGTATCTGCTGGTGCCGCCCATGG CTCAAGAAAGCTGGAACTGCGACACGGCAGAGGGAAGTGGGTGCCAGCAGCAAGAGGGCC TTGTGCTCTGCCCAAACAATTGCGGTTTTTTTGGCTGTGCCGCCACCATGAATCTCTGCT CTAAGTGCTACAGAGAACTCACCTTGAAGAAGCAAGGGAGCCCCTCTGAGTTATCTATAA TCACCTCTGCGTCCGCCACAACTCCGGTGCATCTCTCTCCTGTCGGATCTGAGAAGTCCT GTGCAAAATCTCCCTTTTCACTCTCATTGCCTGCATCTGTCGAACCCCTTAAGGCTCAAA TAGCTCTTCCGTCTTCGGTAATGGGTGAGATTTCACCGATTTCTACTGGCTTGGGGGAGT CAGTGAGCCCTTCGAGCT |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q6H7P8 |
Definition |
sp|Q6H7P8|SAP4_ORYSJ Zinc finger A20 and AN1 domain-containing stress-associated protein 4 OS=Oryza sativa subsp. japonica |
Align length |
97 |
Score (bit) |
70.9 |
E-value |
4.0e-12 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A9NKD1 |
Definition |
tr|A9NKD1|A9NKD1_PICSI Putative uncharacterized protein OS=Picea sitchensis |
Align length |
79 |
Score (bit) |
79.7 |
E-value |
1.0e-13 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK955283|Adiantum capillus-veneris mRNA, clone: TST39A01NGRL0022_K21, 5' (558 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|A9NKD1|A9NKD1_PICSI Putative uncharacterized protein OS=Picea... 80 1e-13 tr|A9NZK1|A9NZK1_PICSI Putative uncharacterized protein OS=Picea... 75 3e-12 tr|A9NK42|A9NK42_PICSI Putative uncharacterized protein OS=Picea... 75 3e-12 tr|A7PPF9|A7PPF9_VITVI Chromosome chr8 scaffold_23, whole genome... 71 4e-11 tr|A3A445|A3A445_ORYSJ cDNA clone:001-042-A06, full insert seque... 71 4e-11 tr|A2X203|A2X203_ORYSI Putative uncharacterized protein OS=Oryza... 71 4e-11 tr|B3IX31|B3IX31_LOTJA Transcription factor C2H2 OS=Lotus japoni... 70 8e-11 tr|A9NUS5|A9NUS5_PICSI Putative uncharacterized protein OS=Picea... 70 1e-10 tr|Q6R3I8|Q6R3I8_MAIZE Putative zinc finger protein ZmZf OS=Zea ... 69 2e-10 tr|Q3BCU2|Q3BCU2_MAIZE Zinc finger A20 and AN1 domains-containin... 69 2e-10 tr|B7E4H0|B7E4H0_ORYSJ cDNA clone:006-301-C11, full insert seque... 69 2e-10 tr|A8QZ71|A8QZ71_MAIZE Putative uncharacterized protein OS=Zea m... 69 2e-10 tr|B8LRP0|B8LRP0_PICSI Putative uncharacterized protein OS=Picea... 68 4e-10 tr|B6SN92|B6SN92_MAIZE Zinc finger A20 and AN1 domains-containin... 67 5e-10 tr|B4F8R6|B4F8R6_MAIZE Putative uncharacterized protein OS=Zea m... 67 5e-10 tr|A5BFH0|A5BFH0_VITVI Putative uncharacterized protein (Chromos... 67 6e-10 tr|B4FDQ8|B4FDQ8_MAIZE Putative uncharacterized protein OS=Zea m... 66 1e-09 tr|Q6T7D0|Q6T7D0_GOSBA Fiber protein Fb37 OS=Gossypium barbadens... 66 1e-09 tr|Q4TZT8|Q4TZT8_GOSHI Fb37 OS=Gossypium hirsutum PE=2 SV=1 66 1e-09 tr|A9PJ34|A9PJ34_POPJC Putative uncharacterized protein OS=Popul... 66 1e-09 tr|A9PEQ1|A9PEQ1_POPTR Putative uncharacterized protein OS=Popul... 66 1e-09 tr|A9TKL7|A9TKL7_PHYPA Predicted protein OS=Physcomitrella paten... 65 2e-09 tr|A9RR10|A9RR10_PHYPA Predicted protein OS=Physcomitrella paten... 64 4e-09 tr|A1ECK5|A1ECK5_9ROSI Putative multiple stress-responsive zinc-... 64 5e-09 tr|A9NYV7|A9NYV7_PICSI Putative uncharacterized protein OS=Picea... 62 2e-08 tr|A9NK82|A9NK82_PICSI Putative uncharacterized protein OS=Picea... 62 2e-08 tr|B7FMV3|B7FMV3_MEDTR Putative uncharacterized protein OS=Medic... 62 2e-08 tr|B7FGP6|B7FGP6_MEDTR Putative uncharacterized protein OS=Medic... 62 2e-08 tr|A9S5V1|A9S5V1_PHYPA Predicted protein OS=Physcomitrella paten... 62 2e-08 tr|B8AL94|B8AL94_ORYSI Putative uncharacterized protein OS=Oryza... 62 3e-08
>tr|A9NKD1|A9NKD1_PICSI Putative uncharacterized protein OS=Picea sitchensis PE=2 SV=1 Length = 181
Score = 79.7 bits (195), Expect = 1e-13 Identities = 39/79 (49%), Positives = 54/79 (68%), Gaps = 1/79 (1%) Frame = +3
Query: 177 MAQESWNCDTAEGSGCQQQEGLVLCPNNCGFFGCAATMNLCSKCYRELTLKKQGSPSELS 356 M QE+WN A+G+GCQ EG LC NNCGFFG +AT NLCSKCYR+L +K+ + S ++ Sbjct: 1 MDQENWNIG-ADGTGCQAPEGHTLCANNCGFFGSSATRNLCSKCYRDLIMKEAQATSAMA 59
Query: 357 II-TSASATTPVHLSPVGS 410 + S +A +P+ P+ S Sbjct: 60 AVEKSFAAGSPMDEVPLSS 78
>tr|A9NZK1|A9NZK1_PICSI Putative uncharacterized protein OS=Picea sitchensis PE=2 SV=1 Length = 180
Score = 74.7 bits (182), Expect = 3e-12 Identities = 34/50 (68%), Positives = 38/50 (76%) Frame = +3
Query: 177 MAQESWNCDTAEGSGCQQQEGLVLCPNNCGFFGCAATMNLCSKCYRELTL 326 MAQESWN + E +GCQ EGL+ C NNCGFFG ATM+LCSKCYRE L Sbjct: 1 MAQESWNREKEE-TGCQVPEGLIRCANNCGFFGSPATMSLCSKCYREFVL 49
>tr|A9NK42|A9NK42_PICSI Putative uncharacterized protein OS=Picea sitchensis PE=2 SV=1 Length = 180
Score = 74.7 bits (182), Expect = 3e-12 Identities = 34/50 (68%), Positives = 38/50 (76%) Frame = +3
Query: 177 MAQESWNCDTAEGSGCQQQEGLVLCPNNCGFFGCAATMNLCSKCYRELTL 326 MAQESWN + E +GCQ EGL+ C NNCGFFG ATM+LCSKCYRE L Sbjct: 1 MAQESWNREKEE-TGCQVPEGLIRCANNCGFFGSPATMSLCSKCYREFVL 49
>tr|A7PPF9|A7PPF9_VITVI Chromosome chr8 scaffold_23, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00021636001 PE=4 SV=1 Length = 161
Score = 70.9 bits (172), Expect = 4e-11 Identities = 44/113 (38%), Positives = 64/113 (56%), Gaps = 6/113 (5%) Frame = +3
Query: 207 AEGSGCQQQEGLVLCPNNCGFFGCAATMNLCSKCYRELTLKKQGSPS-----ELSIITSA 371 AE C+ EG LC NNCGFFG AT+NLCSKCYR+L LK++ + S E S+ ++ Sbjct: 2 AEEHRCEAPEGHRLCANNCGFFGSPATLNLCSKCYRDLRLKEEQASSAKSAVEKSLSAAS 61
Query: 372 SATTPVHLSPVGSEKSCAKSPFSLSLPASVEPLKAQIALPSSVMGEI-SPIST 527 S+T P+ SP +L+LP + +I +P++V + SP +T Sbjct: 62 SSTAPL-------------SPPALTLPEAAN----EITVPAAVTAAVPSPSAT 97
>tr|A3A445|A3A445_ORYSJ cDNA clone:001-042-A06, full insert sequence OS=Oryza sativa subsp. japonica GN=OsJ_005567 PE=2 SV=1 Length = 173
Score = 70.9 bits (172), Expect = 4e-11 Identities = 40/97 (41%), Positives = 57/97 (58%) Frame = +3
Query: 216 SGCQQQEGLVLCPNNCGFFGCAATMNLCSKCYRELTLKKQGSPSELSIITSASATTPVHL 395 +GCQQ EG +LC NNCGFFG AATMN+CSKC++E+ +K+ E + + ++S + V+ Sbjct: 6 AGCQQPEGPILCINNCGFFGSAATMNMCSKCHKEMIMKE-----EQAKLAASSIDSIVNG 60
Query: 396 SPVGSEKSCAKSPFSLSLPASVEPLKAQIALPSSVMG 506 G E A S + A VE K + P+ V G Sbjct: 61 CDGGKEHIVAASGSTAVAVAQVE-AKTLVVQPTDVAG 96
>tr|A2X203|A2X203_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_06227 PE=4 SV=1 Length = 173
Score = 70.9 bits (172), Expect = 4e-11 Identities = 40/97 (41%), Positives = 57/97 (58%) Frame = +3
Query: 216 SGCQQQEGLVLCPNNCGFFGCAATMNLCSKCYRELTLKKQGSPSELSIITSASATTPVHL 395 +GCQQ EG +LC NNCGFFG AATMN+CSKC++E+ +K+ E + + ++S + V+ Sbjct: 6 AGCQQPEGPILCINNCGFFGSAATMNMCSKCHKEMIMKE-----EQAKLAASSIDSIVNG 60
Query: 396 SPVGSEKSCAKSPFSLSLPASVEPLKAQIALPSSVMG 506 G E A S + A VE K + P+ V G Sbjct: 61 CDGGKEHIVAASGSTAVAVAQVE-AKTLVVQPTDVAG 96
>tr|B3IX31|B3IX31_LOTJA Transcription factor C2H2 OS=Lotus japonicus GN=ZF-M39 PE=2 SV=1 Length = 165
Score = 70.1 bits (170), Expect = 8e-11 Identities = 45/106 (42%), Positives = 54/106 (50%), Gaps = 4/106 (3%) Frame = +3
Query: 207 AEGSGCQQQEGLVLCPNNCGFFGCAATMNLCSKCYRELTLKKQGSPSELSIITSASATTP 386 AE C+ EG LC NNCGF G ATM+LCSKCYR++ LK+Q S S I +A Sbjct: 2 AEEHRCEAPEGHRLCVNNCGFSGSPATMDLCSKCYRDIRLKEQQEASTKSTIETA----- 56
Query: 387 VHLSPVGSEKSCAKSPFSLSLPAS----VEPLKAQIALPSSVMGEI 512 + S S AK P S S P+ P KA+ A S G I Sbjct: 57 -----LSSSSSVAKPPSSTSSPSPAVDLAPPAKAETASISLTAGPI 97
>tr|A9NUS5|A9NUS5_PICSI Putative uncharacterized protein OS=Picea sitchensis PE=2 SV=1 Length = 162
Score = 69.7 bits (169), Expect = 1e-10 Identities = 31/66 (46%), Positives = 48/66 (72%) Frame = +3
Query: 177 MAQESWNCDTAEGSGCQQQEGLVLCPNNCGFFGCAATMNLCSKCYRELTLKKQGSPSELS 356 MAQ++W D+ EG+G Q QE +LC N+CGFFG ++TMN CSKC+++L LK+ S + + Sbjct: 1 MAQDNWKGDS-EGTGYQPQEDPILCANSCGFFGSSSTMNFCSKCFKDLVLKQALSAAVVE 59
Query: 357 IITSAS 374 I + ++ Sbjct: 60 ISSGSA 65
>tr|Q6R3I8|Q6R3I8_MAIZE Putative zinc finger protein ZmZf OS=Zea mays PE=2 SV=1 Length = 233
Score = 68.6 bits (166), Expect = 2e-10 Identities = 36/100 (36%), Positives = 53/100 (53%) Frame = +3
Query: 216 SGCQQQEGLVLCPNNCGFFGCAATMNLCSKCYRELTLKKQGSPSELSIITSASATTPVHL 395 +GCQ EG +LC NNCGFFG AATMN+CSKC++E+ K+ + S I S + + Sbjct: 65 AGCQAPEGPILCINNCGFFGSAATMNMCSKCHKEMITKQDQAKLAASSIDSIVDGSDAVM 124
Query: 396 SPVGSEKSCAKSPFSLSLPASVEPLKAQIALPSSVMGEIS 515 P G+ + + + L A +A P+ + IS Sbjct: 125 EPGGAGSNTVVAVAQVELQKKNVQQPADVAEPNEGVAAIS 164
>tr|Q3BCU2|Q3BCU2_MAIZE Zinc finger A20 and AN1 domains-containing protein OS=Zea mays GN=znf1 PE=2 SV=1 Length = 174
Score = 68.6 bits (166), Expect = 2e-10 Identities = 37/100 (37%), Positives = 53/100 (53%) Frame = +3
Query: 216 SGCQQQEGLVLCPNNCGFFGCAATMNLCSKCYRELTLKKQGSPSELSIITSASATTPVHL 395 +GCQ EG +LC NNCGFFG AATMN+CSKC++E+ K+ + S I S + + Sbjct: 6 AGCQAPEGPILCINNCGFFGSAATMNMCSKCHKEMITKQDQAKLAASSIDSIVNGSDAVM 65
Query: 396 SPVGSEKSCAKSPFSLSLPASVEPLKAQIALPSSVMGEIS 515 PV + + + + L A +A PS + IS Sbjct: 66 EPVVAGSNTVVAVAQVELQTMNVQQPADVAGPSEGVAAIS 105
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