DK955284 [AcEST]

DK955284
Clone id	TST39A01NGRL0022_K22
Library	TST39
Length	549
Definition	Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0022_K22. 5' end sequence.
Accession	DK955284
Tissue type	prothallia with plantlets
Developmental stage	gametophytes with sporophytes
Contig ID	-
Sequence	GCCGCTTTTATCGTTCGCCTGAGGTCGTTCTTGGACATGCGTATCCTTAAATGAGGGTGG GTTTCACTTCAGCAAAGTTATTAGGGTTCATACTGTCTTGTTTTTGTAAGGGCTTCTATC GATATTACTCCTTTGCTAGGTAGAGTAATGTTACCTTTAAAAGAAGGTACTGTAAGATGG CTCAATCTTGTTGAGCAAAAGACAAATTTAAGGTCTCTCTGATTTCTTAACAATTAGCGA TCAAGGTTACAACCACGCACACATGCACAATTTGGTTTTGTGAAAAGAATGCTTTCTTTG AACTTTAACGAGGGGTGATGCCTCTATTCTATATAAATCATTGCTAGCGCACAACATTAA GGTATATTCAACCAGCACCTGCAGTTACCAGGATTGGATTGTGTTTCACATCTCAGAACG AAGTGGTCGCTTGCAGAATAAGATAATCAGTGGTTCCAATATTCTATTACGTAACTAGCT TTTGTCACTTGCTGTGTTTACTTAACCATGCATCAGCTATACAACTGCAATTGATATGGT GGGCCCTAG
■■Homology search results ■■	-
Swiss-Prot (release 56.9)	Link to BlastX Result : Swiss-Prot
sp_hit_id	Q8BI55
Definition	sp\|Q8BI55\|DYRK4_MOUSE Dual specificity tyrosine-phosphorylation-regulated kinase 4 OS=Mus musculus
Align length	14
Score (bit)	31.6
E-value	2.6
Report	BLASTX 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= DK955284\|Adiantum capillus-veneris mRNA, clone: TST39A01NGRL0022_K22, 5' (549 letters) Database: uniprot_sprot.fasta 412,525 sequences; 148,809,765 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value sp\|Q8BI55\|DYRK4_MOUSE Dual specificity tyrosine-phosphorylation-... 32 2.6 sp\|Q9NR20\|DYRK4_HUMAN Dual specificity tyrosine-phosphorylation-... 32 2.6 sp\|Q54WE5\|PRP4B_DICDI Serine/threonine-protein kinase prpf4B OS=... 30 7.7 >sp\|Q8BI55\|DYRK4_MOUSE Dual specificity tyrosine-phosphorylation-regulated kinase 4 OS=Mus musculus GN=Dyrk4 PE=1 SV=1 Length = 632 Score = 31.6 bits (70), Expect = 2.6 Identities = 12/14 (85%), Positives = 13/14 (92%) Frame = +3 Query: 3 RFYRSPEVVLGHAY 44 RFYRSPEV+LGH Y Sbjct: 383 RFYRSPEVILGHPY 396 >sp\|Q9NR20\|DYRK4_HUMAN Dual specificity tyrosine-phosphorylation-regulated kinase 4 OS=Homo sapiens GN=DYRK4 PE=1 SV=2 Length = 520 Score = 31.6 bits (70), Expect = 2.6 Identities = 12/14 (85%), Positives = 13/14 (92%) Frame = +3 Query: 3 RFYRSPEVVLGHAY 44 RFYRSPEV+LGH Y Sbjct: 268 RFYRSPEVILGHPY 281 >sp\|Q54WE5\|PRP4B_DICDI Serine/threonine-protein kinase prpf4B OS=Dictyostelium discoideum GN=prpf4B PE=3 SV=1 Length = 811 Score = 30.0 bits (66), Expect = 7.7 Identities = 10/14 (71%), Positives = 13/14 (92%) Frame = +3 Query: 3 RFYRSPEVVLGHAY 44 RFYR+PE++LGH Y Sbjct: 657 RFYRAPEIILGHKY 670
TrEMBL (release 39.9)	Link to BlastX Result : TrEMBL
tr_hit_id	-
Definition	No hits.
Align length	-
Score (bit)	-
E-value	-
Report	BLASTX 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= DK955284\|Adiantum capillus-veneris mRNA, clone: TST39A01NGRL0022_K22, 5' (549 letters) Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters Searching..................................................done *** No hits found ****