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NBDC - LSDB Archive
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DK955286
Clone id TST39A01NGRL0022_K24
Library
Length 523
Definition Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0022_K24. 5' end sequence.
Accession
Tissue type prothallia with plantlets
Developmental stage gametophytes with sporophytes
Contig ID -
Sequence 
GCATCATTTGGGCGACTTCTATTTGATTTAAGCATGCGGTCGATTTGCCTGCAGGCTCTA
AAAGCATTTGAGGTGCATCTGAGCTTCGACTATACATTCCGAGCATTCAGGCAACTGCTT
GTCACAGCCGCAAGCGGCAGCGGTGCGGCATTGTCCAAGCCTTCGTGCAATTTGCACATC
TGAGCTGGGCGACTTATATCTCAAATTCCAAGCAATTGGGCGATTTGTACTTGAGCTTCT
AGGCATTTGGGAGACTTGCATTCTCATGAGTTTCTGAGCGATTGTTGGCCTGTTTGCATC
TCCCAAGCATTTGAACGATTCGCATGTGGGCTTTTTAAGCTGGCAATTGGGTGATTCAAA
GCATTTGGGCCGTTTGCATGTGCAAGTGGGCGACTTCCCTCTGAATCTTTGAGCGATTTG
CTAGCATGTGAGCATTGTGCATCTGAGCGCATTTGGGCGATTTTTGAGAGCGCTTGGGAG
ATTGGCATCAAGCTTTTGAAAGCATTTCACCGCTTTTTTGCAC
■■Homology search results ■■ -
sp_hit_id Q00725
Definition sp|Q00725|SGS4_DROME Salivary glue protein Sgs-4 OS=Drosophila melanogaster
Align length 147
Score (bit) 36.2
E-value 0.092
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK955286|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0022_K24, 5'
         (508 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q00725|SGS4_DROME Salivary glue protein Sgs-4 OS=Drosophila m...    36   0.092
sp|Q8ZLZ9|QSEC_SALTY Sensor protein qseC OS=Salmonella typhimuri...    34   0.45 
sp|Q8Z3P2|QSEC_SALTI Sensor protein qseC OS=Salmonella typhi GN=...    34   0.45 
sp|P40719|QSEC_ECOLI Sensor protein qseC OS=Escherichia coli (st...    33   1.00 
sp|Q8X524|QSEC_ECO57 Sensor protein qseC OS=Escherichia coli O15...    33   1.00 
sp|Q9BXL8|CDCA4_HUMAN Cell division cycle-associated protein 4 O...    32   1.3  
sp|Q5E9W5|G3ST4_BOVIN Galactose-3-O-sulfotransferase 4 OS=Bos ta...    31   3.8  
sp|O00462|MANBA_HUMAN Beta-mannosidase OS=Homo sapiens GN=MANBA ...    31   3.9  
sp|A5A6P5|KRA92_PANTR Keratin-associated protein 9-2 OS=Pan trog...    30   5.0  
sp|Q54Q45|MYBZ_DICDI Myb-like protein Z OS=Dictyostelium discoid...    30   6.5  
sp|Q9Z207|DIAP3_MOUSE Protein diaphanous homolog 3 OS=Mus muscul...    30   6.5  
sp|P20062|TCO2_HUMAN Transcobalamin-2 OS=Homo sapiens GN=TCN2 PE...    30   6.6  
sp|Q9BYQ4|KRA92_HUMAN Keratin-associated protein 9-2 OS=Homo sap...    30   6.6  
sp|A8MXZ3|KR923_HUMAN Putative keratin-associated protein 9-2-li...    30   6.6  
sp|O54775|WISP1_MOUSE WNT1-inducible-signaling pathway protein 1...    30   8.6  
sp|Q3UYH7|ARBK2_MOUSE Beta-adrenergic receptor kinase 2 OS=Mus m...    30   8.6  

>sp|Q00725|SGS4_DROME Salivary glue protein Sgs-4 OS=Drosophila
           melanogaster GN=Sgs4 PE=2 SV=1
          Length = 297

 Score = 36.2 bits (82), Expect = 0.092
 Identities = 33/147 (22%), Positives = 55/147 (37%), Gaps = 9/147 (6%)
 Frame = -2

Query: 477 PSALKNRPNALRCTMLTC*QIAQRFRGKSPTCTCKRPKC-FESPNCQLKKPTCESFKCLG 301
           P   K +P   +    TC       R + PTC  + P C  E P C+ + PTC++     
Sbjct: 112 PPTCKTKPPTCKTEPPTCKTEPPTCRTEPPTCKTEPPTCRTEPPTCKTEPPTCKTEPPTC 171

Query: 300 DANRPT---IAQKLMRMQVSQMPRSSSTNRPIAWNLRYKSPSSDVQIARRLGQCRTA--A 136
               P      +++ R +  +  RS ST + +     +  P +  +     G    +   
Sbjct: 172 KTEPPCEKHCTKRIKRHRTKRTKRSKSTKKIVH---HHNRPGTTPESGCGCGSKNESGGG 228

Query: 135 ACGC---DKQLPECSECIVEAQMHLKC 64
             GC   D   P+C +   + Q   KC
Sbjct: 229 GSGCILKDLLTPKCPDSKPKPQASPKC 255



 Score = 35.8 bits (81), Expect = 0.12
 Identities = 18/55 (32%), Positives = 25/55 (45%), Gaps = 1/55 (1%)
 Frame = -2

Query: 477 PSALKNRPNALRCTMLTC*QIAQRFRGKSPTCTCKRPKC-FESPNCQLKKPTCES 316
           P   K +P   R    TC       + K PTC  + P C  E P C+ + PTC++
Sbjct: 91  PPTCKTKPPTCRTEPPTCRTEPPTCKTKPPTCKTEPPTCKTEPPTCRTEPPTCKT 145



 Score = 34.7 bits (78), Expect = 0.27
 Identities = 19/55 (34%), Positives = 24/55 (43%), Gaps = 1/55 (1%)
 Frame = -2

Query: 477 PSALKNRPNALRCTMLTC*QIAQRFRGKSPTCTCKRPKC-FESPNCQLKKPTCES 316
           P   K  P   R    TC       + K PTC  + P C  E P C+ K PTC++
Sbjct: 77  PPTCKTEPPTCRTEPPTC-------KTKPPTCRTEPPTCRTEPPTCKTKPPTCKT 124



 Score = 32.7 bits (73), Expect = 1.0
 Identities = 17/55 (30%), Positives = 22/55 (40%), Gaps = 1/55 (1%)
 Frame = -2

Query: 477 PSALKNRPNALRCTMLTC*QIAQRFRGKSPTCTCKRPKC-FESPNCQLKKPTCES 316
           P   +  P     T   C       R + PTC  + P C  E P C+ K PTC +
Sbjct: 49  PPRCETEPPRCETTTPKCETTPPTCRTEPPTCKTEPPTCRTEPPTCKTKPPTCRT 103



 Score = 32.3 bits (72), Expect = 1.3
 Identities = 17/48 (35%), Positives = 22/48 (45%), Gaps = 1/48 (2%)
 Frame = -2

Query: 456 PNALRCTMLTC*QIAQRFRGKSPTCTCKRPKC-FESPNCQLKKPTCES 316
           P   R    TC       R + PTC  K P C  E P C+ + PTC++
Sbjct: 70  PPTCRTEPPTCKTEPPTCRTEPPTCKTKPPTCRTEPPTCRTEPPTCKT 117


>sp|Q8ZLZ9|QSEC_SALTY Sensor protein qseC OS=Salmonella typhimurium
           GN=qseC PE=3 SV=1
          Length = 449

 Score = 33.9 bits (76), Expect = 0.45
 Identities = 21/57 (36%), Positives = 32/57 (56%), Gaps = 1/57 (1%)
 Frame = -3

Query: 263 ECKSP-KCLEAQVQIAQLLGI*DISRPAQMCKLHEGLDNAAPLPLAAVTSSCLNARN 96
           E +SP   L+ Q ++AQL G   +SR   + +LH G+D A  L    +T S L++ N
Sbjct: 247 ELRSPLAALKVQTEVAQLSGDDPLSRDKALTQLHAGIDRATRLVDQLLTLSRLDSLN 303


>sp|Q8Z3P2|QSEC_SALTI Sensor protein qseC OS=Salmonella typhi
           GN=qseC PE=3 SV=1
          Length = 449

 Score = 33.9 bits (76), Expect = 0.45
 Identities = 21/57 (36%), Positives = 32/57 (56%), Gaps = 1/57 (1%)
 Frame = -3

Query: 263 ECKSP-KCLEAQVQIAQLLGI*DISRPAQMCKLHEGLDNAAPLPLAAVTSSCLNARN 96
           E +SP   L+ Q ++AQL G   +SR   + +LH G+D A  L    +T S L++ N
Sbjct: 247 ELRSPLAALKVQTEVAQLSGDDPLSRDKALTQLHAGIDRATRLVDQLLTLSRLDSLN 303


>sp|P40719|QSEC_ECOLI Sensor protein qseC OS=Escherichia coli
           (strain K12) GN=qseC PE=1 SV=2
          Length = 449

 Score = 32.7 bits (73), Expect = 1.00
 Identities = 27/105 (25%), Positives = 52/105 (49%), Gaps = 1/105 (0%)
 Frame = -3

Query: 413 LKDSEGSRPLAHANGPNALNHPIASLKSPHANRSNAWEMQTGQQSLRNS*ECKSP-KCLE 237
           ++D +  +PL     P+ +   + SL    A R++A  ++  + +   + E +SP   L+
Sbjct: 198 MRDPDSEKPLNATGVPSEVRPLVESLNQLFA-RTHAMMVRERRFTSDAAHELRSPLTALK 256

Query: 236 AQVQIAQLLGI*DISRPAQMCKLHEGLDNAAPLPLAAVTSSCLNA 102
            Q ++AQL      +R   + +LH G+D A  L    +T S L++
Sbjct: 257 VQTEVAQLSDDDPQARKKALLQLHSGIDRATRLVDQLLTLSRLDS 301


>sp|Q8X524|QSEC_ECO57 Sensor protein qseC OS=Escherichia coli
           O157:H7 GN=qseC PE=2 SV=1
          Length = 449

 Score = 32.7 bits (73), Expect = 1.00
 Identities = 27/105 (25%), Positives = 52/105 (49%), Gaps = 1/105 (0%)
 Frame = -3

Query: 413 LKDSEGSRPLAHANGPNALNHPIASLKSPHANRSNAWEMQTGQQSLRNS*ECKSP-KCLE 237
           ++D +  +PL     P+ +   + SL    A R++A  ++  + +   + E +SP   L+
Sbjct: 198 MRDPDSEKPLNATGVPSEVRPLVESLNQLFA-RTHAMMVRERRFTSDAAHELRSPLTALK 256

Query: 236 AQVQIAQLLGI*DISRPAQMCKLHEGLDNAAPLPLAAVTSSCLNA 102
            Q ++AQL      +R   + +LH G+D A  L    +T S L++
Sbjct: 257 VQTEVAQLSDDDPQARKKALLQLHSGIDRATRLVDQLLTLSRLDS 301


>sp|Q9BXL8|CDCA4_HUMAN Cell division cycle-associated protein 4
           OS=Homo sapiens GN=CDCA4 PE=2 SV=1
          Length = 241

 Score = 32.3 bits (72), Expect = 1.3
 Identities = 33/121 (27%), Positives = 51/121 (42%), Gaps = 24/121 (19%)
 Frame = -3

Query: 401 EGSRPL-----AHANGPNALNHPIASLKSPHANRSNAWEMQTGQQS----------LRNS 267
           EG+ P       H  GP +   P+ S ++P   +S+AWEM   +++          +  +
Sbjct: 109 EGAHPAPGLGDGHTQGPVSDLCPVTSAQAPRHLQSSAWEMDGPRENRGSFHKSLDQIFET 168

Query: 266 *ECKSPKCLEAQVQIAQ---------LLGI*DISRPAQMCKLHEGLDNAAPLPLAAVTSS 114
            E K+P C+E                L G+   +RP   C+  EGL  A P P    +SS
Sbjct: 169 LETKNPSCMEELFSDVDSPYYDLDTVLTGMMGGARPGP-CEGLEGLAPATPGP----SSS 223

Query: 113 C 111
           C
Sbjct: 224 C 224


>sp|Q5E9W5|G3ST4_BOVIN Galactose-3-O-sulfotransferase 4 OS=Bos
           taurus GN=GAL3ST4 PE=2 SV=1
          Length = 483

 Score = 30.8 bits (68), Expect = 3.8
 Identities = 14/40 (35%), Positives = 20/40 (50%)
 Frame = -3

Query: 398 GSRPLAHANGPNALNHPIASLKSPHANRSNAWEMQTGQQS 279
           G+ P AH   PNAL HP+  +   H+  S+   +  G  S
Sbjct: 243 GAGPPAHTLDPNALFHPVPIVADGHSQMSSPASLDLGSSS 282


>sp|O00462|MANBA_HUMAN Beta-mannosidase OS=Homo sapiens GN=MANBA
           PE=1 SV=3
          Length = 879

 Score = 30.8 bits (68), Expect = 3.9
 Identities = 16/60 (26%), Positives = 28/60 (46%)
 Frame = +1

Query: 109 RQLLVTAASGSGAALSKPSCNLHI*AGRLISQIPSNWAICT*ASRHLGDLHSHEFLSDCW 288
           R+L++          S P+      A   +SQ P+        S + GD+H ++++SDCW
Sbjct: 490 RELVLAGDKSRPFITSSPTNGAETVAEAWVSQNPN--------SNYFGDVHFYDYISDCW 541


>sp|A5A6P5|KRA92_PANTR Keratin-associated protein 9-2 OS=Pan
           troglodytes GN=KRTAP9-2 PE=2 SV=1
          Length = 170

 Score = 30.4 bits (67), Expect = 5.0
 Identities = 18/52 (34%), Positives = 22/52 (42%), Gaps = 2/52 (3%)
 Frame = -2

Query: 441 CTMLTC*QIAQRFRGKSPTC--TCKRPKCFESPNCQLKKPTCESFKCLGDAN 292
           C   TC Q         PTC  +C +P C  +P CQ   PTC    C G  +
Sbjct: 61  CCRTTCCQ---------PTCVTSCYQPSCCSTPCCQ---PTCCGSSCCGQTS 100


>sp|Q54Q45|MYBZ_DICDI Myb-like protein Z OS=Dictyostelium discoideum
           GN=mybZ PE=4 SV=1
          Length = 726

 Score = 30.0 bits (66), Expect = 6.5
 Identities = 27/93 (29%), Positives = 36/93 (38%)
 Frame = -3

Query: 374 NGPNALNHPIASLKSPHANRSNAWEMQTGQQSLRNS*ECKSPKCLEAQVQIAQLLGI*DI 195
           NG N  N+  +SL  PH+   +  + Q+ QQ   N  +   PK  +             I
Sbjct: 637 NGNNYNNNYRSSLSPPHSPHES--DRQSPQQKSNNENQQNFPKFRKP------------I 682

Query: 194 SRPAQMCKLHEGLDNAAPLPLAAVTSSCLNARN 96
            RPAQ C+ H       P PL       LN  N
Sbjct: 683 GRPAQSCEAHRNEHQKCP-PLCPNRPENLNNNN 714
tr_hit_id A9S1X5
Definition tr|A9S1X5|A9S1X5_PHYPA Predicted protein (Fragment) OS=Physcomitrella patens subsp. patens
Align length 73
Score (bit) 34.7
E-value 2.7
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK955286|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0022_K24, 5'
         (508 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|A9S1X5|A9S1X5_PHYPA Predicted protein (Fragment) OS=Physcomit...    35   2.7  
tr|B4T646|B4T646_SALNS Sensor protein QseC OS=Salmonella newport...    34   3.5  
tr|B5PWY8|B5PWY8_SALHA Sensor protein QseC OS=Salmonella enteric...    34   3.5  
tr|B6JE54|B6JE54_OLICO Transporter, nitrate/nitrite porter (NNP)...    34   3.6  
tr|B6PGE3|B6PGE3_BRAFL Putative uncharacterized protein (Fragmen...    34   3.6  
tr|B4L119|B4L119_DROMO GI13091 OS=Drosophila mojavensis GN=GI130...    34   3.6  
tr|Q5PMT5|Q5PMT5_SALPA Sensor protein OS=Salmonella paratyphi A ...    34   4.6  
tr|Q57JT4|Q57JT4_SALCH Sensor protein OS=Salmonella choleraesuis...    34   4.6  
tr|B5RED7|B5RED7_SALG2 Probable two-component system sensor hist...    34   4.6  
tr|B5QZ15|B5QZ15_SALEP Probable two-component system sensor hist...    34   4.6  
tr|B5FV44|B5FV44_SALDC Sensor protein QseC OS=Salmonella dublin ...    34   4.6  
tr|B5F671|B5F671_SALA4 Sensor protein QseC OS=Salmonella agona (...    34   4.6  
tr|B5BFZ0|B5BFZ0_SALPK Probable two-component system sensor hist...    34   4.6  
tr|B4TVQ9|B4TVQ9_SALSV Sensor protein QseC OS=Salmonella schwarz...    34   4.6  
tr|B4TI27|B4TI27_SALHS Sensor protein QseC OS=Salmonella heidelb...    34   4.6  
tr|A9N5V2|A9N5V2_SALPB Sensor protein OS=Salmonella paratyphi B ...    34   4.6  
tr|B5Q5V2|B5Q5V2_SALVI Sensor protein QseC OS=Salmonella enteric...    34   4.6  
tr|B5PF37|B5PF37_SALET Sensor protein QseC OS=Salmonella enteric...    34   4.6  
tr|B5P4Y8|B5P4Y8_SALET Sensor protein QseC OS=Salmonella enteric...    34   4.6  
tr|B5NQR1|B5NQR1_SALET Sensor protein QseC OS=Salmonella enteric...    34   4.6  
tr|B5NCF5|B5NCF5_SALET Sensor protein QseC OS=Salmonella enteric...    34   4.6  
tr|B5MVP0|B5MVP0_SALET Sensor protein QseC OS=Salmonella enteric...    34   4.6  
tr|B5MP23|B5MP23_SALET Sensor protein QseC OS=Salmonella enteric...    34   4.6  
tr|B5CGL1|B5CGL1_SALET Sensor protein QseC OS=Salmonella enteric...    34   4.6  
tr|B5C0N3|B5C0N3_SALET Sensor protein QseC OS=Salmonella enteric...    34   4.6  
tr|B4A1E8|B4A1E8_SALNE Sensor protein QseC OS=Salmonella enteric...    34   4.6  
tr|B3YLS7|B3YLS7_SALET Sensor protein QseC OS=Salmonella enteric...    34   4.6  
tr|B6MIT4|B6MIT4_BRAFL Putative uncharacterized protein OS=Branc...    34   4.6  
tr|Q6MG89|Q6MG89_RAT Notch homolog 4, [Drosophila] OS=Rattus nor...    34   4.7  
tr|Q53VT0|Q53VT0_CANFA Mitochondrial associated cysteine-rich pr...    34   4.7  

>tr|A9S1X5|A9S1X5_PHYPA Predicted protein (Fragment)
           OS=Physcomitrella patens subsp. patens
           GN=PHYPADRAFT_10474 PE=3 SV=1
          Length = 912

 Score = 34.7 bits (78), Expect = 2.7
 Identities = 24/73 (32%), Positives = 39/73 (53%), Gaps = 4/73 (5%)
 Frame = -2

Query: 267 MRMQVSQMPRSSS----TNRPIAWNLRYKSPSSDVQIARRLGQCRTAAACGCDKQLPECS 100
           +  +V Q+ +S S    TNRPI  N+     S+DV +A+ L      A  G DK+L E +
Sbjct: 456 LEAEVQQLQQSKSRSVLTNRPIYPNVANVVKSADV-VAKELEYSSVQA--GLDKELQELN 512

Query: 99  ECIVEAQMHLKCF 61
           +C+ + +  +K F
Sbjct: 513 KCLEQKEAEMKSF 525


>tr|B4T646|B4T646_SALNS Sensor protein QseC OS=Salmonella newport
           (strain SL254) GN=SNSL254_A3434 PE=4 SV=1
          Length = 449

 Score = 34.3 bits (77), Expect = 3.5
 Identities = 21/57 (36%), Positives = 32/57 (56%), Gaps = 1/57 (1%)
 Frame = -3

Query: 263 ECKSP-KCLEAQVQIAQLLGI*DISRPAQMCKLHEGLDNAAPLPLAAVTSSCLNARN 96
           E +SP   L+ Q ++AQL G   +SR   + +LH G+D A  L    +T S L++ N
Sbjct: 247 ELRSPLAALKVQTEVAQLSGDDPLSRDKALAQLHAGIDRATRLVDQLLTLSRLDSLN 303


>tr|B5PWY8|B5PWY8_SALHA Sensor protein QseC OS=Salmonella enterica
           subsp. enterica serovar Hadar str. RI_05P066
           GN=SeH_A3624 PE=4 SV=1
          Length = 449

 Score = 34.3 bits (77), Expect = 3.5
 Identities = 21/57 (36%), Positives = 32/57 (56%), Gaps = 1/57 (1%)
 Frame = -3

Query: 263 ECKSP-KCLEAQVQIAQLLGI*DISRPAQMCKLHEGLDNAAPLPLAAVTSSCLNARN 96
           E +SP   L+ Q ++AQL G   +SR   + +LH G+D A  L    +T S L++ N
Sbjct: 247 ELRSPLAALKVQTEVAQLSGDDPLSRDKALAQLHAGIDRATRLVDQLLTLSRLDSLN 303


>tr|B6JE54|B6JE54_OLICO Transporter, nitrate/nitrite porter (NNP)
           family OS=Oligotropha carboxidovorans (strain ATCC 49405
           / DSM 1227 / OM5) GN=narD PE=4 SV=1
          Length = 433

 Score = 34.3 bits (77), Expect = 3.6
 Identities = 23/76 (30%), Positives = 34/76 (44%), Gaps = 8/76 (10%)
 Frame = +2

Query: 110 GNCLSQPQAAAVRHCPSLRAICTSELGDLYLKFQAIGRFVL--------ELLGIWETCIL 265
           G C+S  +AA  +H P         +G L      +G FVL        +L GIW  C +
Sbjct: 338 GFCMSLGKAAVYKHIPVYYPNNVGAVGGLVGMIGGLGGFVLPIVFGALNDLTGIWSNCFM 397

Query: 266 MSF*AIVGLFASPKHL 313
           + F A+ G+  +  HL
Sbjct: 398 LLF-ALAGVCLAWMHL 412


>tr|B6PGE3|B6PGE3_BRAFL Putative uncharacterized protein (Fragment)
           OS=Branchiostoma floridae GN=BRAFLDRAFT_249640 PE=4 SV=1
          Length = 79

 Score = 34.3 bits (77), Expect = 3.6
 Identities = 17/40 (42%), Positives = 21/40 (52%)
 Frame = -2

Query: 390 PTCTCKRPKCFESPNCQLKKPTCESFKCLGDANRPTIAQK 271
           PTC C+RP C E P+C  +   CE   C     RPT  Q+
Sbjct: 30  PTC-CERPTCCERPSCCERPTCCERPTC---CQRPTCCQR 65


>tr|B4L119|B4L119_DROMO GI13091 OS=Drosophila mojavensis GN=GI13091
            PE=4 SV=1
          Length = 3836

 Score = 34.3 bits (77), Expect = 3.6
 Identities = 18/59 (30%), Positives = 27/59 (45%)
 Frame = -2

Query: 480  LPSALKNRPNALRCTMLTC*QIAQRFRGKSPTCTCKRPKCFESPNCQLKKPTCESFKCL 304
            +P +  N      C+  TC  I  +   K+ T TC  PKC E  + +L   T ++  CL
Sbjct: 2622 MPGSELNYQEEEECSEFTCVPIPTKEVNKNETITCVEPKCPEKYDVELDLSTAKAGDCL 2680


>tr|Q5PMT5|Q5PMT5_SALPA Sensor protein OS=Salmonella paratyphi A
           GN=ygiY PE=3 SV=1
          Length = 449

 Score = 33.9 bits (76), Expect = 4.6
 Identities = 21/57 (36%), Positives = 32/57 (56%), Gaps = 1/57 (1%)
 Frame = -3

Query: 263 ECKSP-KCLEAQVQIAQLLGI*DISRPAQMCKLHEGLDNAAPLPLAAVTSSCLNARN 96
           E +SP   L+ Q ++AQL G   +SR   + +LH G+D A  L    +T S L++ N
Sbjct: 247 ELRSPLAALKVQTEVAQLSGDDPLSRDKALTQLHAGIDRATRLVDQLLTLSRLDSLN 303


>tr|Q57JT4|Q57JT4_SALCH Sensor protein OS=Salmonella choleraesuis
           GN=ygiY PE=3 SV=1
          Length = 449

 Score = 33.9 bits (76), Expect = 4.6
 Identities = 21/57 (36%), Positives = 32/57 (56%), Gaps = 1/57 (1%)
 Frame = -3

Query: 263 ECKSP-KCLEAQVQIAQLLGI*DISRPAQMCKLHEGLDNAAPLPLAAVTSSCLNARN 96
           E +SP   L+ Q ++AQL G   +SR   + +LH G+D A  L    +T S L++ N
Sbjct: 247 ELRSPLAALKVQTEVAQLSGDDPLSRDKALTQLHAGIDRATRLVDQLLTLSRLDSLN 303


>tr|B5RED7|B5RED7_SALG2 Probable two-component system sensor
           histidine kinase OS=Salmonella gallinarum (strain 287/91
           / NCTC 13346) GN=ygiY PE=3 SV=1
          Length = 449

 Score = 33.9 bits (76), Expect = 4.6
 Identities = 21/57 (36%), Positives = 32/57 (56%), Gaps = 1/57 (1%)
 Frame = -3

Query: 263 ECKSP-KCLEAQVQIAQLLGI*DISRPAQMCKLHEGLDNAAPLPLAAVTSSCLNARN 96
           E +SP   L+ Q ++AQL G   +SR   + +LH G+D A  L    +T S L++ N
Sbjct: 247 ELRSPLAALKVQTEVAQLSGDDPLSRDKALTQLHAGIDRATRLVDQLLTLSRLDSLN 303


>tr|B5QZ15|B5QZ15_SALEP Probable two-component system sensor
           histidine kinase OS=Salmonella enteritidis PT4 (strain
           P125109) GN=ygiY PE=3 SV=1
          Length = 449

 Score = 33.9 bits (76), Expect = 4.6
 Identities = 21/57 (36%), Positives = 32/57 (56%), Gaps = 1/57 (1%)
 Frame = -3

Query: 263 ECKSP-KCLEAQVQIAQLLGI*DISRPAQMCKLHEGLDNAAPLPLAAVTSSCLNARN 96
           E +SP   L+ Q ++AQL G   +SR   + +LH G+D A  L    +T S L++ N
Sbjct: 247 ELRSPLAALKVQTEVAQLSGDDPLSRDKALTQLHAGIDRATRLVDQLLTLSRLDSLN 303