NBDC - アーカイブトップ - ヘルプ
データベースの説明 | データ項目の説明 | ダウンロード | 利用許諾 | ヘルプ
AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
NBDC - LSDB Archive
Description of this DB | Description of data items | Download | License
AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
DK955289
Clone id TST39A01NGRL0022_L03
Library
Length 584
Definition Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0022_L03. 5' end sequence.
Accession
Tissue type prothallia with plantlets
Developmental stage gametophytes with sporophytes
Contig ID -
Sequence 
CAGAACGCGAAATTGCACAGAGTGCAGATGTTATATGCTGCACTTGTGTTGGTGCTGGTG
ACCCTCGTTTGCTAAACTTTAGATTCAGACAGGTTTTGATTGACGAGTCCACTCAAGCAA
CGGAACCAGAGTGTTTAATACCTTTAGTACTAGGTGCAAAGCAGGTTGTCCTTGTGGGAG
ATCACTGTCAGCTTGGCCCTGTGATAATGTGTAAGAAAGCAGCACGAGCTGGCCTTGCCC
AGTCTTTATTTGAACGTTTGGTTTTGCTCGGAGTCAAGCCTATACGTTTGGTGGTGCAAT
ATCGAATGCATCCGTCCCTTTCAGAGTTTCCCTCAAACAACTTCTACGAGGGCACGTTAC
AAAATGGCATCACCATGAATGAGAGATTGACTGTGGGAATTGATTTCCCTTGGCCTGTAC
CTAATAGGCCGATGTTTTTCTATGTGCAGATGGGCCAGGAAGAAATAAGTGCAAGTGGTA
CATCATATCTCAACAGGACAGAAGCTGCAAATGTTGAGAAGATTGTCACCACTTTTTTGA
AGACAGGTGTCTTGCCTAGCCAGATTGGTGTGATAACACCTTAT
■■Homology search results ■■ -
sp_hit_id Q9FJR0
Definition sp|Q9FJR0|RENT1_ARATH Regulator of nonsense transcripts 1 homolog OS=Arabidopsis thaliana
Align length 194
Score (bit) 356.0
E-value 4.0e-98
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK955289|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0022_L03, 5'
         (584 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q9FJR0|RENT1_ARATH Regulator of nonsense transcripts 1 homolo...   356   4e-98
sp|Q9EPU0|RENT1_MOUSE Regulator of nonsense transcripts 1 OS=Mus...   312   9e-85
sp|Q92900|RENT1_HUMAN Regulator of nonsense transcripts 1 OS=Hom...   312   9e-85
sp|Q9HEH1|RENT1_NEUCR Regulator of nonsense transcripts 1 homolo...   300   3e-81
sp|Q9VYS3|RENT1_DROME Regulator of nonsense transcripts 1 homolo...   295   1e-79
sp|Q09820|RENT1_SCHPO Regulator of nonsense transcripts 1 homolo...   289   8e-78
sp|O76512|RENT1_CAEEL Regulator of nonsense transcripts 1 OS=Cae...   272   1e-72
sp|Q98TR3|RENT1_FUGRU Putative regulator of nonsense transcripts...   270   3e-72
sp|P30771|NAM7_YEAST ATP-dependent helicase NAM7 OS=Saccharomyce...   260   3e-69
sp|Q6ZU11|YD002_HUMAN Uncharacterized protein FLJ44066 OS=Homo s...   112   1e-24
sp|Q92355|SEN1_SCHPO Helicase sen1 OS=Schizosaccharomyces pombe ...   105   2e-22
sp|O94247|HCS1_SCHPO DNA polymerase alpha-associated DNA helicas...   104   4e-22
sp|O94387|YGSA_SCHPO Uncharacterized ATP-dependent helicase C29A...   101   2e-21
sp|Q00416|SEN1_YEAST Helicase SEN1 OS=Saccharomyces cerevisiae G...   101   3e-21
sp|P51530|DNA2L_HUMAN DNA2-like helicase OS=Homo sapiens GN=DNA2...    97   4e-20
sp|Q6ZQJ5|DNA2L_MOUSE DNA2-like helicase OS=Mus musculus GN=Dna2...    97   6e-20
sp|P32644|ECM32_YEAST Putative ATP-dependent RNA helicase ECM32 ...    96   2e-19
sp|Q9BYK8|PR285_HUMAN Peroxisomal proliferator-activated recepto...    92   2e-18
sp|Q8QHA5|DNA2L_XENLA DNA2-like helicase OS=Xenopus laevis GN=dn...    91   5e-18
sp|Q5ZKG3|DNA2L_CHICK DNA2-like helicase OS=Gallus gallus GN=DNA...    88   3e-17
sp|Q8GYD9|SDE3_ARATH Probable RNA helicase SDE3 OS=Arabidopsis t...    88   4e-17
sp|Q86AS0|Y4399_DICDI Probable helicase DDB_G0274399 OS=Dictyost...    86   1e-16
sp|Q57568|Y104_METJA Uncharacterized ATP-dependent helicase MJ01...    84   4e-16
sp|Q9BXT6|M10L1_HUMAN Putative helicase Mov10l1 OS=Homo sapiens ...    81   3e-15
sp|Q99MV5|M10L1_MOUSE Putative helicase Mov10l1 OS=Mus musculus ...    81   4e-15
sp|P34243|HCS1_YEAST DNA polymerase alpha-associated DNA helicas...    79   1e-14
sp|P23249|MOV10_MOUSE Putative helicase MOV-10 OS=Mus musculus G...    79   2e-14
sp|Q60560|SMBP2_MESAU DNA-binding protein SMUBP-2 OS=Mesocricetu...    78   3e-14
sp|Q9HCE1|MOV10_HUMAN Putative helicase MOV-10 OS=Homo sapiens G...    78   3e-14
sp|A2AKX3|SETX_MOUSE Probable helicase senataxin OS=Mus musculus...    78   4e-14

>sp|Q9FJR0|RENT1_ARATH Regulator of nonsense transcripts 1 homolog
            OS=Arabidopsis thaliana GN=UPF1 PE=2 SV=2
          Length = 1254

 Score =  356 bits (914), Expect = 4e-98
 Identities = 174/194 (89%), Positives = 183/194 (94%)
 Frame = +3

Query: 3    EREIAQSADVICCTCVGAGDPRLLNFRFRQVLIDESTQATEPECLIPLVLGAKQVVLVGD 182
            EREI QSADVICCTCVGA D RL NFRFRQVLIDESTQATEPECLIPLVLG KQVVLVGD
Sbjct: 623  EREITQSADVICCTCVGAADLRLSNFRFRQVLIDESTQATEPECLIPLVLGVKQVVLVGD 682

Query: 183  HCQLGPVIMCKKAARAGLAQSLFERLVLLGVKPIRLVVQYRMHPSLSEFPSNNFYEGTLQ 362
            HCQLGPVIMCKKAARAGLAQSLFERLV LG+KPIRL VQYRMHP+LSEFPSN+FYEGTLQ
Sbjct: 683  HCQLGPVIMCKKAARAGLAQSLFERLVTLGIKPIRLQVQYRMHPALSEFPSNSFYEGTLQ 742

Query: 363  NGITMNERLTVGIDFPWPVPNRPMFFYVQMGQEEISASGTSYLNRTEAANVEKIVTTFLK 542
            NG+T+ ER T GIDFPWPVPNRPMFFYVQ+GQEEISASGTSYLNRTEAANVEK+VT FLK
Sbjct: 743  NGVTIIERQTTGIDFPWPVPNRPMFFYVQLGQEEISASGTSYLNRTEAANVEKLVTAFLK 802

Query: 543  TGVLPSQIGVITPY 584
            +GV+PSQIGVITPY
Sbjct: 803  SGVVPSQIGVITPY 816


>sp|Q9EPU0|RENT1_MOUSE Regulator of nonsense transcripts 1 OS=Mus
            musculus GN=Upf1 PE=1 SV=2
          Length = 1124

 Score =  312 bits (799), Expect = 9e-85
 Identities = 144/194 (74%), Positives = 169/194 (87%)
 Frame = +3

Query: 3    EREIAQSADVICCTCVGAGDPRLLNFRFRQVLIDESTQATEPECLIPLVLGAKQVVLVGD 182
            ERE+  +ADVICCTCVGAGDPRL   +FR +LIDESTQATEPEC++P+VLGAKQ++LVGD
Sbjct: 609  ERELLMNADVICCTCVGAGDPRLAKMQFRSILIDESTQATEPECMVPVVLGAKQLILVGD 668

Query: 183  HCQLGPVIMCKKAARAGLAQSLFERLVLLGVKPIRLVVQYRMHPSLSEFPSNNFYEGTLQ 362
            HCQLGPV+MCKKAA+AGL+QSLFERLV+LG++PIRL VQYRMHP+LS FPSN FYEG+LQ
Sbjct: 669  HCQLGPVVMCKKAAKAGLSQSLFERLVVLGIRPIRLQVQYRMHPALSAFPSNIFYEGSLQ 728

Query: 363  NGITMNERLTVGIDFPWPVPNRPMFFYVQMGQEEISASGTSYLNRTEAANVEKIVTTFLK 542
            NG+T  +R+  G DF WP P++PMFFYV  GQEEI++SGTSYLNRTEAANVEKI T  LK
Sbjct: 729  NGVTAADRVKKGFDFQWPQPDKPMFFYVTQGQEEIASSGTSYLNRTEAANVEKITTKLLK 788

Query: 543  TGVLPSQIGVITPY 584
             G  P QIG+ITPY
Sbjct: 789  AGAKPDQIGIITPY 802


>sp|Q92900|RENT1_HUMAN Regulator of nonsense transcripts 1 OS=Homo
            sapiens GN=UPF1 PE=1 SV=2
          Length = 1129

 Score =  312 bits (799), Expect = 9e-85
 Identities = 144/194 (74%), Positives = 169/194 (87%)
 Frame = +3

Query: 3    EREIAQSADVICCTCVGAGDPRLLNFRFRQVLIDESTQATEPECLIPLVLGAKQVVLVGD 182
            ERE+  +ADVICCTCVGAGDPRL   +FR +LIDESTQATEPEC++P+VLGAKQ++LVGD
Sbjct: 614  ERELLMNADVICCTCVGAGDPRLAKMQFRSILIDESTQATEPECMVPVVLGAKQLILVGD 673

Query: 183  HCQLGPVIMCKKAARAGLAQSLFERLVLLGVKPIRLVVQYRMHPSLSEFPSNNFYEGTLQ 362
            HCQLGPV+MCKKAA+AGL+QSLFERLV+LG++PIRL VQYRMHP+LS FPSN FYEG+LQ
Sbjct: 674  HCQLGPVVMCKKAAKAGLSQSLFERLVVLGIRPIRLQVQYRMHPALSAFPSNIFYEGSLQ 733

Query: 363  NGITMNERLTVGIDFPWPVPNRPMFFYVQMGQEEISASGTSYLNRTEAANVEKIVTTFLK 542
            NG+T  +R+  G DF WP P++PMFFYV  GQEEI++SGTSYLNRTEAANVEKI T  LK
Sbjct: 734  NGVTAADRVKKGFDFQWPQPDKPMFFYVTQGQEEIASSGTSYLNRTEAANVEKITTKLLK 793

Query: 543  TGVLPSQIGVITPY 584
             G  P QIG+ITPY
Sbjct: 794  AGAKPDQIGIITPY 807


>sp|Q9HEH1|RENT1_NEUCR Regulator of nonsense transcripts 1 homolog
            OS=Neurospora crassa GN=2E4.130 PE=3 SV=1
          Length = 1093

 Score =  300 bits (769), Expect = 3e-81
 Identities = 149/194 (76%), Positives = 161/194 (82%)
 Frame = +3

Query: 3    EREIAQSADVICCTCVGAGDPRLLNFRFRQVLIDESTQATEPECLIPLVLGAKQVVLVGD 182
            EREI Q+ADV+CCTCVGAGDPRL   +FR VLIDESTQ+ EPEC+IPLVLG KQVVLVGD
Sbjct: 588  EREILQNADVVCCTCVGAGDPRLSKMKFRNVLIDESTQSAEPECMIPLVLGCKQVVLVGD 647

Query: 183  HCQLGPVIMCKKAARAGLAQSLFERLVLLGVKPIRLVVQYRMHPSLSEFPSNNFYEGTLQ 362
            H QLGPVIM KKAA+AGL QSLFERLV L   PIRL VQYRMHP LSEFPSN FYEG+LQ
Sbjct: 648  HKQLGPVIMNKKAAKAGLNQSLFERLVKLQFTPIRLKVQYRMHPCLSEFPSNMFYEGSLQ 707

Query: 363  NGITMNERLTVGIDFPWPVPNRPMFFYVQMGQEEISASGTSYLNRTEAANVEKIVTTFLK 542
            NG+T  ERL   +DFPWPVP  PM F+  +G EEISASGTSYLNRTEAANVEKIVT F K
Sbjct: 708  NGVTAAERLRKDVDFPWPVPETPMMFWSNLGNEEISASGTSYLNRTEAANVEKIVTRFFK 767

Query: 543  TGVLPSQIGVITPY 584
             GV P+ IGVITPY
Sbjct: 768  AGVKPADIGVITPY 781


>sp|Q9VYS3|RENT1_DROME Regulator of nonsense transcripts 1 homolog
            OS=Drosophila melanogaster GN=Upf1 PE=1 SV=2
          Length = 1180

 Score =  295 bits (755), Expect = 1e-79
 Identities = 137/194 (70%), Positives = 164/194 (84%)
 Frame = +3

Query: 3    EREIAQSADVICCTCVGAGDPRLLNFRFRQVLIDESTQATEPECLIPLVLGAKQVVLVGD 182
            E ++ ++ADVICCTCVGAGD RL   +F  +LIDES Q+TEPEC++P+VLGAKQ++LVGD
Sbjct: 584  ENQLLEAADVICCTCVGAGDGRLSRVKFTSILIDESMQSTEPECMVPVVLGAKQLILVGD 643

Query: 183  HCQLGPVIMCKKAARAGLAQSLFERLVLLGVKPIRLVVQYRMHPSLSEFPSNNFYEGTLQ 362
            HCQLGPV+MCKKAARAGL+QSLFERLV+LG++P RL VQYRMHP LS+FPSN FYEG+LQ
Sbjct: 644  HCQLGPVVMCKKAARAGLSQSLFERLVVLGIRPFRLEVQYRMHPELSQFPSNFFYEGSLQ 703

Query: 363  NGITMNERLTVGIDFPWPVPNRPMFFYVQMGQEEISASGTSYLNRTEAANVEKIVTTFLK 542
            NG+   +R  + +DFPWP P RPMFF V  GQEEI+ SGTS+LNRTEAANVEKI T FLK
Sbjct: 704  NGVCAEDR-RLKLDFPWPQPERPMFFLVTQGQEEIAGSGTSFLNRTEAANVEKITTRFLK 762

Query: 543  TGVLPSQIGVITPY 584
             G+ P QIG+ITPY
Sbjct: 763  AGIKPEQIGIITPY 776


>sp|Q09820|RENT1_SCHPO Regulator of nonsense transcripts 1 homolog
            OS=Schizosaccharomyces pombe GN=SPAC16C9.06c PE=2 SV=2
          Length = 925

 Score =  289 bits (739), Expect = 8e-78
 Identities = 136/194 (70%), Positives = 163/194 (84%)
 Frame = +3

Query: 3    EREIAQSADVICCTCVGAGDPRLLNFRFRQVLIDESTQATEPECLIPLVLGAKQVVLVGD 182
            E+E+ ++A VICCTCVGAGD R+  ++FR VLIDE+TQA+EPEC+IPLVLGAKQVVLVGD
Sbjct: 531  EKELLRAAHVICCTCVGAGDRRISKYKFRSVLIDEATQASEPECMIPLVLGAKQVVLVGD 590

Query: 183  HCQLGPVIMCKKAARAGLAQSLFERLVLLGVKPIRLVVQYRMHPSLSEFPSNNFYEGTLQ 362
            H QLGPV+M KK A A L+QSLFERL++LG  P RLVVQYRMHP LSEFPSN FYEGTLQ
Sbjct: 591  HQQLGPVVMNKKVALASLSQSLFERLIILGNSPFRLVVQYRMHPCLSEFPSNTFYEGTLQ 650

Query: 363  NGITMNERLTVGIDFPWPVPNRPMFFYVQMGQEEISASGTSYLNRTEAANVEKIVTTFLK 542
            NG+T +ER+   +DFPW  P+ P+ FY   GQEE+SASGTS+LNRTEA+  EKIVTTFL+
Sbjct: 651  NGVTTSERIARHVDFPWIQPDSPLMFYANFGQEELSASGTSFLNRTEASTCEKIVTTFLR 710

Query: 543  TGVLPSQIGVITPY 584
            + VLP QIG++TPY
Sbjct: 711  SNVLPEQIGIVTPY 724


>sp|O76512|RENT1_CAEEL Regulator of nonsense transcripts 1
            OS=Caenorhabditis elegans GN=smg-2 PE=1 SV=1
          Length = 1069

 Score =  272 bits (695), Expect = 1e-72
 Identities = 131/194 (67%), Positives = 156/194 (80%)
 Frame = +3

Query: 3    EREIAQSADVICCTCVGAGDPRLLNFRFRQVLIDESTQATEPECLIPLVLGAKQVVLVGD 182
            E E+  +ADVICCTC  A D RL   R R VLIDESTQATEPE L+ ++ G +Q+VLVGD
Sbjct: 577  EHELLAAADVICCTCSSAADARLSKIRTRTVLIDESTQATEPEILVSIMRGVRQLVLVGD 636

Query: 183  HCQLGPVIMCKKAARAGLAQSLFERLVLLGVKPIRLVVQYRMHPSLSEFPSNNFYEGTLQ 362
            HCQLGPV++CKKAA AGL+QSLFERLVLLG++P RL VQYRMHP LSEFPSN FY+G+LQ
Sbjct: 637  HCQLGPVVICKKAAIAGLSQSLFERLVLLGIRPFRLQVQYRMHPVLSEFPSNVFYDGSLQ 696

Query: 363  NGITMNERLTVGIDFPWPVPNRPMFFYVQMGQEEISASGTSYLNRTEAANVEKIVTTFLK 542
            NG+T N+R   G+D+ WP PN+P FF+   G EE+SASGTS+LNRTEAANVEK+V+  +K
Sbjct: 697  NGVTENDRHMTGVDWHWPKPNKPAFFWHCSGSEELSASGTSFLNRTEAANVEKLVSKLIK 756

Query: 543  TGVLPSQIGVITPY 584
             GV P QIGVIT Y
Sbjct: 757  AGVQPHQIGVITSY 770


>sp|Q98TR3|RENT1_FUGRU Putative regulator of nonsense transcripts 1
            OS=Fugu rubripes GN=rent1 PE=3 SV=1
          Length = 1097

 Score =  270 bits (691), Expect = 3e-72
 Identities = 131/194 (67%), Positives = 156/194 (80%)
 Frame = +3

Query: 3    EREIAQSADVICCTCVGAGDPRLLNFRFRQVLIDESTQATEPECLIPLVLGAKQVVLVGD 182
            ERE+  +ADVI CTCV AGDPRL   +FR +LIDESTQATEP+C+ P+ LGAKQ++L G+
Sbjct: 585  ERELLMNADVIWCTCVRAGDPRLAKMQFRSILIDESTQATEPKCIGPVELGAKQLIL-GE 643

Query: 183  HCQLGPVIMCKKAARAGLAQSLFERLVLLGVKPIRLVVQYRMHPSLSEFPSNNFYEGTLQ 362
                   +MCKKAA+AGL+QSLFERLV+LG++PIRL VQYRMHP+LS FPSN FYEG+LQ
Sbjct: 644  ITASWSCVMCKKAAKAGLSQSLFERLVVLGIRPIRLQVQYRMHPALSAFPSNIFYEGSLQ 703

Query: 363  NGITMNERLTVGIDFPWPVPNRPMFFYVQMGQEEISASGTSYLNRTEAANVEKIVTTFLK 542
            NG+T  +R+  G DF WP P +PMFFYV  GQEEI++SGTSYLNRTEAANVEKI T  LK
Sbjct: 704  NGVTAGDRIKKGFDFQWPQPEKPMFFYVTQGQEEIASSGTSYLNRTEAANVEKITTRLLK 763

Query: 543  TGVLPSQIGVITPY 584
             G  P QIG+ITPY
Sbjct: 764  AGAKPDQIGIITPY 777


>sp|P30771|NAM7_YEAST ATP-dependent helicase NAM7 OS=Saccharomyces
            cerevisiae GN=NAM7 PE=1 SV=1
          Length = 971

 Score =  260 bits (665), Expect = 3e-69
 Identities = 130/194 (67%), Positives = 152/194 (78%)
 Frame = +3

Query: 3    EREIAQSADVICCTCVGAGDPRLLNFRFRQVLIDESTQATEPECLIPLVLGAKQVVLVGD 182
            E EI   ADV+CCTCVGAGD RL + +FR VLIDESTQA+EPECLIP+V GAKQV+LVGD
Sbjct: 540  EAEILNKADVVCCTCVGAGDKRL-DTKFRTVLIDESTQASEPECLIPIVKGAKQVILVGD 598

Query: 183  HCQLGPVIMCKKAARAGLAQSLFERLVLLGVKPIRLVVQYRMHPSLSEFPSNNFYEGTLQ 362
            H QLGPVI+ +KAA AGL QSLFERL+ LG  PIRL VQYRM+P LSEFPSN FYEG+LQ
Sbjct: 599  HQQLGPVILERKAADAGLKQSLFERLISLGHVPIRLEVQYRMNPYLSEFPSNMFYEGSLQ 658

Query: 363  NGITMNERLTVGIDFPWPVPNRPMFFYVQMGQEEISASGTSYLNRTEAANVEKIVTTFLK 542
            NG+T+ +R      FPWP+   PM F+   G+EEISA+GTS+LNR EA N E+I+T   +
Sbjct: 659  NGVTIEQRTVPNSKFPWPIRGIPMMFWANYGREEISANGTSFLNRIEAMNCERIITKLFR 718

Query: 543  TGVLPSQIGVITPY 584
             GV P QIGVITPY
Sbjct: 719  DGVKPEQIGVITPY 732


>sp|Q6ZU11|YD002_HUMAN Uncharacterized protein FLJ44066 OS=Homo
            sapiens PE=1 SV=1
          Length = 926

 Score =  112 bits (280), Expect = 1e-24
 Identities = 73/195 (37%), Positives = 108/195 (55%), Gaps = 2/195 (1%)
 Frame = +3

Query: 6    REIAQSADVICCTCVGAGDPRLLNFRFRQVLIDESTQATEPECLIPLV-LGAKQVVLVGD 182
            R + +   V+  TC     P + + +F  V++DE +Q TEP  L+P+     ++++LVGD
Sbjct: 599  RTLLKQVRVVGVTCAACPFPCMNDLKFPVVVLDECSQITEPASLLPIARFECEKLILVGD 658

Query: 183  HCQLGPVIMCKKAARA-GLAQSLFERLVLLGVKPIRLVVQYRMHPSLSEFPSNNFYEGTL 359
              QL P I    AA   GL Q+LF+RL L+G KPI L  QYR HP++S   ++ FY+G L
Sbjct: 659  PKQLPPTIQGSDAAHENGLEQTLFDRLCLMGHKPILLRTQYRCHPAISAIANDLFYKGAL 718

Query: 360  QNGITMNERLTVGIDFPWPVPNRPMFFYVQMGQEEISASGTSYLNRTEAANVEKIVTTFL 539
             NG+T  ER  +     W +P   + FY   G E+I     S+ N  EA    K++ + +
Sbjct: 719  MNGVTEIERSPL---LEW-LPT--LCFYNVKGLEQIERD-NSFHNVAEATFTLKLIQSLI 771

Query: 540  KTGVLPSQIGVITPY 584
             +G+  S IGVIT Y
Sbjct: 772  ASGIAGSMIGVITLY 786
tr_hit_id A7PCF0
Definition tr|A7PCF0|A7PCF0_VITVI Chromosome chr2 scaffold_11, whole genome shotgun sequence OS=Vitis vinifera
Align length 194
Score (bit) 370.0
E-value 1.0e-101
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK955289|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0022_L03, 5'
         (584 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|A7PCF0|A7PCF0_VITVI Chromosome chr2 scaffold_11, whole genome...   370   e-101
tr|Q69VT5|Q69VT5_ORYSJ Putative type 1 RNA helicase OS=Oryza sat...   364   2e-99
tr|Q0D6B1|Q0D6B1_ORYSJ Os07g0495900 protein (Fragment) OS=Oryza ...   364   2e-99
tr|B8B6D2|B8B6D2_ORYSI Putative uncharacterized protein OS=Oryza...   364   2e-99
tr|A3BK00|A3BK00_ORYSJ Putative uncharacterized protein OS=Oryza...   364   2e-99
tr|A8I9D7|A8I9D7_CHLRE UPF1 protein (Fragment) OS=Chlamydomonas ...   313   3e-84
tr|Q7ZVZ4|Q7ZVZ4_DANRE Upf1 regulator of nonsense transcripts ho...   313   4e-84
tr|Q6GNR2|Q6GNR2_XENLA MGC80941 protein OS=Xenopus laevis GN=MGC...   312   1e-83
tr|A9UM85|A9UM85_XENTR LOC100135270 protein (Fragment) OS=Xenopu...   312   1e-83
tr|Q4SBL0|Q4SBL0_TETNG Chromosome 15 SCAF14667, whole genome sho...   311   2e-83
tr|A8NEE6|A8NEE6_COPC7 Putative uncharacterized protein OS=Copri...   311   2e-83
tr|A9UPD7|A9UPD7_MONBE Predicted protein (Fragment) OS=Monosiga ...   308   2e-82
tr|B7PZ74|B7PZ74_IXOSC Nonsense-mediated mRNA decay protein, put...   306   7e-82
tr|B8M268|B8M268_9EURO Nonsense transcript regulator, putative O...   303   6e-81
tr|A6QTP5|A6QTP5_AJECN ATP-dependent helicase NAM7 OS=Ajellomyce...   302   8e-81
tr|B6QCK9|B6QCK9_PENMA Nonsense transcript regulator, putative O...   302   1e-80
tr|Q16NZ5|Q16NZ5_AEDAE Nonsense-mediated mrna decay protein 1 (R...   301   2e-80
tr|B0WYS1|B0WYS1_CULQU Nonsense-mediated mRNA decay protein 1 OS...   301   2e-80
tr|Q1DS86|Q1DS86_COCIM Putative uncharacterized protein OS=Cocci...   301   2e-80
tr|B2B731|B2B731_PODAN Predicted CDS Pa_2_9730 OS=Podospora anse...   299   9e-80
tr|Q0UC02|Q0UC02_PHANO Putative uncharacterized protein OS=Phaeo...   298   1e-79
tr|A6S6M8|A6S6M8_BOTFB Putative uncharacterized protein OS=Botry...   298   1e-79
tr|B2WIV2|B2WIV2_PYRTR DNA-binding protein SMUBP-2 OS=Pyrenophor...   298   1e-79
tr|Q5BFN4|Q5BFN4_EMENI Putative uncharacterized protein OS=Emeri...   297   3e-79
tr|A4RDH7|A4RDH7_MAGGR Putative uncharacterized protein OS=Magna...   297   3e-79
tr|Q2UCH7|Q2UCH7_ASPOR RNA helicase nonsense mRNA reducing facto...   296   4e-79
tr|B8N676|B8N676_ASPFL Regulator of nonsense transcripts, putati...   296   4e-79
tr|A2QRH3|A2QRH3_ASPNC Contig An08c0130, complete genome OS=Aspe...   296   4e-79
tr|Q7PWZ4|Q7PWZ4_ANOGA AGAP001133-PA (Fragment) OS=Anopheles gam...   296   6e-79
tr|Q0D0N3|Q0D0N3_ASPTN ATP-dependent helicase NAM7 OS=Aspergillu...   296   6e-79

>tr|A7PCF0|A7PCF0_VITVI Chromosome chr2 scaffold_11, whole genome
            shotgun sequence OS=Vitis vinifera GN=GSVIVT00015835001
            PE=4 SV=1
          Length = 1267

 Score =  370 bits (951), Expect = e-101
 Identities = 181/194 (93%), Positives = 189/194 (97%)
 Frame = +3

Query: 3    EREIAQSADVICCTCVGAGDPRLLNFRFRQVLIDESTQATEPECLIPLVLGAKQVVLVGD 182
            EREI+QSADVICCTCVGAGDPRL NFRFRQVLIDESTQATEPECLIPLVLG KQVVLVGD
Sbjct: 608  EREISQSADVICCTCVGAGDPRLANFRFRQVLIDESTQATEPECLIPLVLGVKQVVLVGD 667

Query: 183  HCQLGPVIMCKKAARAGLAQSLFERLVLLGVKPIRLVVQYRMHPSLSEFPSNNFYEGTLQ 362
            HCQLGPVIMCKKAARAGLAQSLFERLVLLGVKPIRL VQYRMHPSLSEFPSN+FYEGTLQ
Sbjct: 668  HCQLGPVIMCKKAARAGLAQSLFERLVLLGVKPIRLQVQYRMHPSLSEFPSNSFYEGTLQ 727

Query: 363  NGITMNERLTVGIDFPWPVPNRPMFFYVQMGQEEISASGTSYLNRTEAANVEKIVTTFLK 542
            NG+T+NER + GIDFPWPVPNRPMFFYVQMGQEEISASGTSYLNRTEAANVEKIVTTFL+
Sbjct: 728  NGVTINERQSSGIDFPWPVPNRPMFFYVQMGQEEISASGTSYLNRTEAANVEKIVTTFLR 787

Query: 543  TGVLPSQIGVITPY 584
            +GV+PSQIGVITPY
Sbjct: 788  SGVVPSQIGVITPY 801


>tr|Q69VT5|Q69VT5_ORYSJ Putative type 1 RNA helicase OS=Oryza sativa
            subsp. japonica GN=OJ1457_D07.109-1 PE=4 SV=1
          Length = 1277

 Score =  364 bits (935), Expect = 2e-99
 Identities = 178/194 (91%), Positives = 185/194 (95%)
 Frame = +3

Query: 3    EREIAQSADVICCTCVGAGDPRLLNFRFRQVLIDESTQATEPECLIPLVLGAKQVVLVGD 182
            EREI QSADVICCTCVGAGDPRL NFRFRQVLIDESTQATEPECLIPLVLG KQVVLVGD
Sbjct: 647  EREILQSADVICCTCVGAGDPRLANFRFRQVLIDESTQATEPECLIPLVLGVKQVVLVGD 706

Query: 183  HCQLGPVIMCKKAARAGLAQSLFERLVLLGVKPIRLVVQYRMHPSLSEFPSNNFYEGTLQ 362
            HCQLGPVIMCKKAARAGLAQSLFERLV+LGVKP RL VQYRMHP LS+FPSN FYEGTLQ
Sbjct: 707  HCQLGPVIMCKKAARAGLAQSLFERLVILGVKPFRLQVQYRMHPCLSDFPSNCFYEGTLQ 766

Query: 363  NGITMNERLTVGIDFPWPVPNRPMFFYVQMGQEEISASGTSYLNRTEAANVEKIVTTFLK 542
            NG+T+NER T GIDFPWPVPNRPMFFYVQMGQEEISASGTSYLNRTEAANVEKIVTTFL+
Sbjct: 767  NGVTVNERQTPGIDFPWPVPNRPMFFYVQMGQEEISASGTSYLNRTEAANVEKIVTTFLR 826

Query: 543  TGVLPSQIGVITPY 584
            +GV+PSQIGVITPY
Sbjct: 827  SGVVPSQIGVITPY 840


>tr|Q0D6B1|Q0D6B1_ORYSJ Os07g0495900 protein (Fragment) OS=Oryza
            sativa subsp. japonica GN=Os07g0495900 PE=4 SV=1
          Length = 1121

 Score =  364 bits (935), Expect = 2e-99
 Identities = 178/194 (91%), Positives = 185/194 (95%)
 Frame = +3

Query: 3    EREIAQSADVICCTCVGAGDPRLLNFRFRQVLIDESTQATEPECLIPLVLGAKQVVLVGD 182
            EREI QSADVICCTCVGAGDPRL NFRFRQVLIDESTQATEPECLIPLVLG KQVVLVGD
Sbjct: 491  EREILQSADVICCTCVGAGDPRLANFRFRQVLIDESTQATEPECLIPLVLGVKQVVLVGD 550

Query: 183  HCQLGPVIMCKKAARAGLAQSLFERLVLLGVKPIRLVVQYRMHPSLSEFPSNNFYEGTLQ 362
            HCQLGPVIMCKKAARAGLAQSLFERLV+LGVKP RL VQYRMHP LS+FPSN FYEGTLQ
Sbjct: 551  HCQLGPVIMCKKAARAGLAQSLFERLVILGVKPFRLQVQYRMHPCLSDFPSNCFYEGTLQ 610

Query: 363  NGITMNERLTVGIDFPWPVPNRPMFFYVQMGQEEISASGTSYLNRTEAANVEKIVTTFLK 542
            NG+T+NER T GIDFPWPVPNRPMFFYVQMGQEEISASGTSYLNRTEAANVEKIVTTFL+
Sbjct: 611  NGVTVNERQTPGIDFPWPVPNRPMFFYVQMGQEEISASGTSYLNRTEAANVEKIVTTFLR 670

Query: 543  TGVLPSQIGVITPY 584
            +GV+PSQIGVITPY
Sbjct: 671  SGVVPSQIGVITPY 684


>tr|B8B6D2|B8B6D2_ORYSI Putative uncharacterized protein OS=Oryza
            sativa subsp. indica GN=OsI_26082 PE=4 SV=1
          Length = 1277

 Score =  364 bits (935), Expect = 2e-99
 Identities = 178/194 (91%), Positives = 185/194 (95%)
 Frame = +3

Query: 3    EREIAQSADVICCTCVGAGDPRLLNFRFRQVLIDESTQATEPECLIPLVLGAKQVVLVGD 182
            EREI QSADVICCTCVGAGDPRL NFRFRQVLIDESTQATEPECLIPLVLG KQVVLVGD
Sbjct: 647  EREILQSADVICCTCVGAGDPRLANFRFRQVLIDESTQATEPECLIPLVLGVKQVVLVGD 706

Query: 183  HCQLGPVIMCKKAARAGLAQSLFERLVLLGVKPIRLVVQYRMHPSLSEFPSNNFYEGTLQ 362
            HCQLGPVIMCKKAARAGLAQSLFERLV+LGVKP RL VQYRMHP LS+FPSN FYEGTLQ
Sbjct: 707  HCQLGPVIMCKKAARAGLAQSLFERLVILGVKPFRLQVQYRMHPCLSDFPSNCFYEGTLQ 766

Query: 363  NGITMNERLTVGIDFPWPVPNRPMFFYVQMGQEEISASGTSYLNRTEAANVEKIVTTFLK 542
            NG+T+NER T GIDFPWPVPNRPMFFYVQMGQEEISASGTSYLNRTEAANVEKIVTTFL+
Sbjct: 767  NGVTVNERQTPGIDFPWPVPNRPMFFYVQMGQEEISASGTSYLNRTEAANVEKIVTTFLR 826

Query: 543  TGVLPSQIGVITPY 584
            +GV+PSQIGVITPY
Sbjct: 827  SGVVPSQIGVITPY 840


>tr|A3BK00|A3BK00_ORYSJ Putative uncharacterized protein OS=Oryza
            sativa subsp. japonica GN=OsJ_023372 PE=4 SV=1
          Length = 1289

 Score =  364 bits (935), Expect = 2e-99
 Identities = 178/194 (91%), Positives = 185/194 (95%)
 Frame = +3

Query: 3    EREIAQSADVICCTCVGAGDPRLLNFRFRQVLIDESTQATEPECLIPLVLGAKQVVLVGD 182
            EREI QSADVICCTCVGAGDPRL NFRFRQVLIDESTQATEPECLIPLVLG KQVVLVGD
Sbjct: 647  EREILQSADVICCTCVGAGDPRLANFRFRQVLIDESTQATEPECLIPLVLGVKQVVLVGD 706

Query: 183  HCQLGPVIMCKKAARAGLAQSLFERLVLLGVKPIRLVVQYRMHPSLSEFPSNNFYEGTLQ 362
            HCQLGPVIMCKKAARAGLAQSLFERLV+LGVKP RL VQYRMHP LS+FPSN FYEGTLQ
Sbjct: 707  HCQLGPVIMCKKAARAGLAQSLFERLVILGVKPFRLQVQYRMHPCLSDFPSNCFYEGTLQ 766

Query: 363  NGITMNERLTVGIDFPWPVPNRPMFFYVQMGQEEISASGTSYLNRTEAANVEKIVTTFLK 542
            NG+T+NER T GIDFPWPVPNRPMFFYVQMGQEEISASGTSYLNRTEAANVEKIVTTFL+
Sbjct: 767  NGVTVNERQTPGIDFPWPVPNRPMFFYVQMGQEEISASGTSYLNRTEAANVEKIVTTFLR 826

Query: 543  TGVLPSQIGVITPY 584
            +GV+PSQIGVITPY
Sbjct: 827  SGVVPSQIGVITPY 840


>tr|A8I9D7|A8I9D7_CHLRE UPF1 protein (Fragment) OS=Chlamydomonas
            reinhardtii GN=UPF1 PE=4 SV=1
          Length = 800

 Score =  313 bits (803), Expect = 3e-84
 Identities = 151/194 (77%), Positives = 168/194 (86%)
 Frame = +3

Query: 3    EREIAQSADVICCTCVGAGDPRLLNFRFRQVLIDESTQATEPECLIPLVLGAKQVVLVGD 182
            E E+ ++ADV+C TCVGAGDPRL +FRF+ VLIDESTQA EPECLIP+VLGAKQV+LVGD
Sbjct: 484  EMEVLENADVVCTTCVGAGDPRLSHFRFQHVLIDESTQAAEPECLIPMVLGAKQVILVGD 543

Query: 183  HCQLGPVIMCKKAARAGLAQSLFERLVLLGVKPIRLVVQYRMHPSLSEFPSNNFYEGTLQ 362
            HCQLGPVIMCKKAA AGL QSLFERL LLGVKPIRL VQYRMHP LSEFPSN FYEGTLQ
Sbjct: 544  HCQLGPVIMCKKAAEAGLCQSLFERLRLLGVKPIRLQVQYRMHPCLSEFPSNTFYEGTLQ 603

Query: 363  NGITMNERLTVGIDFPWPVPNRPMFFYVQMGQEEISASGTSYLNRTEAANVEKIVTTFLK 542
            NG  M ER   G+DFPWP P++PM F+VQ+G EEISAS TSYLNRTEAA VEK+VT FL+
Sbjct: 604  NGTGMGERRLAGVDFPWPNPDKPMMFWVQLGAEEISASSTSYLNRTEAAAVEKVVTRFLQ 663

Query: 543  TGVLPSQIGVITPY 584
             G+ P+QIGVITPY
Sbjct: 664  NGMSPAQIGVITPY 677


>tr|Q7ZVZ4|Q7ZVZ4_DANRE Upf1 regulator of nonsense transcripts homolog
            (Yeast) OS=Danio rerio GN=upf1 PE=1 SV=1
          Length = 1100

 Score =  313 bits (802), Expect = 4e-84
 Identities = 145/194 (74%), Positives = 169/194 (87%)
 Frame = +3

Query: 3    EREIAQSADVICCTCVGAGDPRLLNFRFRQVLIDESTQATEPECLIPLVLGAKQVVLVGD 182
            ERE+  +ADVICCTCVGAGDPRL   +FR +LIDESTQATEPEC++P+VLGAKQ++LVGD
Sbjct: 583  ERELLMNADVICCTCVGAGDPRLAKMQFRSILIDESTQATEPECMVPVVLGAKQLILVGD 642

Query: 183  HCQLGPVIMCKKAARAGLAQSLFERLVLLGVKPIRLVVQYRMHPSLSEFPSNNFYEGTLQ 362
            HCQLGPV+MCKKAA+AGL+QSLFERLV+LG++PIRL VQYRMHP+LS FPSN FYEG+LQ
Sbjct: 643  HCQLGPVVMCKKAAKAGLSQSLFERLVVLGIRPIRLQVQYRMHPALSAFPSNIFYEGSLQ 702

Query: 363  NGITMNERLTVGIDFPWPVPNRPMFFYVQMGQEEISASGTSYLNRTEAANVEKIVTTFLK 542
            NG+T  +RL  G DF WP P++PMFFYV  GQEEI++SGTSYLNRTEAANVEKI T  LK
Sbjct: 703  NGVTAADRLKKGFDFQWPQPDKPMFFYVTQGQEEIASSGTSYLNRTEAANVEKITTRLLK 762

Query: 543  TGVLPSQIGVITPY 584
             G  P QIG+ITPY
Sbjct: 763  AGAKPDQIGIITPY 776


>tr|Q6GNR2|Q6GNR2_XENLA MGC80941 protein OS=Xenopus laevis GN=MGC80941
            PE=2 SV=1
          Length = 1098

 Score =  312 bits (799), Expect = 1e-83
 Identities = 144/194 (74%), Positives = 169/194 (87%)
 Frame = +3

Query: 3    EREIAQSADVICCTCVGAGDPRLLNFRFRQVLIDESTQATEPECLIPLVLGAKQVVLVGD 182
            ERE+  +ADVICCTCVGAGDPRL   +FR +LIDESTQATEPEC++P+VLGAKQ++LVGD
Sbjct: 582  ERELLMNADVICCTCVGAGDPRLAKMQFRSILIDESTQATEPECMVPVVLGAKQLILVGD 641

Query: 183  HCQLGPVIMCKKAARAGLAQSLFERLVLLGVKPIRLVVQYRMHPSLSEFPSNNFYEGTLQ 362
            HCQLGPV+MCKKAA+AGL+QSLFERLV+LG++PIRL VQYRMHP+LS FPSN FYEG+LQ
Sbjct: 642  HCQLGPVVMCKKAAKAGLSQSLFERLVVLGIRPIRLQVQYRMHPALSAFPSNIFYEGSLQ 701

Query: 363  NGITMNERLTVGIDFPWPVPNRPMFFYVQMGQEEISASGTSYLNRTEAANVEKIVTTFLK 542
            NG+T  +R+  G DF WP P++PMFFYV  GQEEI++SGTSYLNRTEAANVEKI T  LK
Sbjct: 702  NGVTAADRVKKGFDFQWPQPDKPMFFYVTQGQEEIASSGTSYLNRTEAANVEKITTKLLK 761

Query: 543  TGVLPSQIGVITPY 584
             G  P QIG+ITPY
Sbjct: 762  AGAKPDQIGIITPY 775


>tr|A9UM85|A9UM85_XENTR LOC100135270 protein (Fragment) OS=Xenopus
           tropicalis GN=LOC100135270 PE=2 SV=1
          Length = 587

 Score =  312 bits (799), Expect = 1e-83
 Identities = 144/194 (74%), Positives = 169/194 (87%)
 Frame = +3

Query: 3   EREIAQSADVICCTCVGAGDPRLLNFRFRQVLIDESTQATEPECLIPLVLGAKQVVLVGD 182
           ERE+  +ADVICCTCVGAGDPRL   +FR +LIDESTQATEPEC++P+VLGAKQ++LVGD
Sbjct: 71  ERELLMNADVICCTCVGAGDPRLAKMQFRSILIDESTQATEPECMVPVVLGAKQLILVGD 130

Query: 183 HCQLGPVIMCKKAARAGLAQSLFERLVLLGVKPIRLVVQYRMHPSLSEFPSNNFYEGTLQ 362
           HCQLGPV+MCKKAA+AGL+QSLFERLV+LG++PIRL VQYRMHP+LS FPSN FYEG+LQ
Sbjct: 131 HCQLGPVVMCKKAAKAGLSQSLFERLVVLGIRPIRLQVQYRMHPALSAFPSNIFYEGSLQ 190

Query: 363 NGITMNERLTVGIDFPWPVPNRPMFFYVQMGQEEISASGTSYLNRTEAANVEKIVTTFLK 542
           NG+T  +R+  G DF WP P++PMFFYV  GQEEI++SGTSYLNRTEAANVEKI T  LK
Sbjct: 191 NGVTAADRVKKGFDFQWPQPDKPMFFYVTQGQEEIASSGTSYLNRTEAANVEKITTKLLK 250

Query: 543 TGVLPSQIGVITPY 584
            G  P QIG+ITPY
Sbjct: 251 AGAKPDQIGIITPY 264


>tr|Q4SBL0|Q4SBL0_TETNG Chromosome 15 SCAF14667, whole genome shotgun
            sequence OS=Tetraodon nigroviridis GN=GSTENG00020924001
            PE=4 SV=1
          Length = 1123

 Score =  311 bits (797), Expect = 2e-83
 Identities = 144/194 (74%), Positives = 168/194 (86%)
 Frame = +3

Query: 3    EREIAQSADVICCTCVGAGDPRLLNFRFRQVLIDESTQATEPECLIPLVLGAKQVVLVGD 182
            ERE+  +ADVICCTCVGAGDPRL   +FR +LIDESTQATEPEC++P VLGAKQ++LVGD
Sbjct: 582  ERELLMNADVICCTCVGAGDPRLAKMQFRSILIDESTQATEPECMVPAVLGAKQLILVGD 641

Query: 183  HCQLGPVIMCKKAARAGLAQSLFERLVLLGVKPIRLVVQYRMHPSLSEFPSNNFYEGTLQ 362
            HCQLGPV+MCKKAA+AGL+QSLFERLV+LG++PIRL VQYRMHP+LS FPSN FYEG+LQ
Sbjct: 642  HCQLGPVVMCKKAAKAGLSQSLFERLVVLGIRPIRLQVQYRMHPALSAFPSNIFYEGSLQ 701

Query: 363  NGITMNERLTVGIDFPWPVPNRPMFFYVQMGQEEISASGTSYLNRTEAANVEKIVTTFLK 542
            NG+T  +R+  G DF WP P++PMFFYV  GQEEI++SGTSYLNRTEAANVEKI T  LK
Sbjct: 702  NGVTSADRVKKGFDFQWPQPDKPMFFYVTQGQEEIASSGTSYLNRTEAANVEKITTRLLK 761

Query: 543  TGVLPSQIGVITPY 584
             G  P QIG+ITPY
Sbjct: 762  AGAKPDQIGIITPY 775