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NBDC - LSDB Archive
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DK955290
Clone id TST39A01NGRL0022_L04
Library
Length 525
Definition Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0022_L04. 5' end sequence.
Accession
Tissue type prothallia with plantlets
Developmental stage gametophytes with sporophytes
Contig ID
Sequence 
GGTTCAAAATCGAATGTTGAAAGCTGCTCTCATGGTAGCTGACACTTCCTCTCGTTCGGC
GCGGTGAGGAACGTGACGTCTTCTGCGCTGATTGTCTTGCAGACACAGACCAGGTTTTGG
TTATGGCTTTGGAGTTTGTCAGCCCAGAAGGACTTCGTTTAGATGGCCGCCGTCCAACTG
AGATGCGTCAATTACGGGCAAAATTAGGCGTCGTGGATAAAGCGGACGGGTCGGCCACAT
TTGAGATGGGCAACACGAAGGTGATTGCAGCTGTTTATGGACCTCATGAGGTGCAAAATA
GGGGCCAGCAGCTTTTTGATCAAGCTTTGGTAAGATGTGAATATAGCATGGCAAATTTCA
GCACTGGTGACCGCAGGAGGAAACAAAAGGGAGACCGACGCTCTGTCGAGATTTCACTCG
TAATCCGTCAAAGCATGGAGGCTGCAATCTTGACAAATCTCATGCCCCGCACACAGATTG
ATATATTTGTGCATGTACTTCAAGCTGATGGAGGAAACTCGATCT
■■Homology search results ■■ -
sp_hit_id Q921I9
Definition sp|Q921I9|EXOS4_MOUSE Exosome complex exonuclease RRP41 OS=Mus musculus
Align length 130
Score (bit) 135.0
E-value 9.0e-32
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK955290|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0022_L04, 5'
         (525 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q921I9|EXOS4_MOUSE Exosome complex exonuclease RRP41 OS=Mus m...   135   9e-32
sp|Q9NPD3|EXOS4_HUMAN Exosome complex exonuclease RRP41 OS=Homo ...   135   1e-31
sp|Q7YRA3|EXOS4_BOVIN Exosome complex exonuclease RRP41 OS=Bos t...   135   1e-31
sp|Q975G8|ECX1_SULTO Probable exosome complex exonuclease 1 OS=S...   124   3e-28
sp|Q9UXC2|ECX1_SULSO Probable exosome complex exonuclease 1 OS=S...   120   4e-27
sp|Q4JB27|ECX1_SULAC Probable exosome complex exonuclease 1 OS=S...   119   1e-26
sp|Q8TYC1|ECX1_METKA Probable exosome complex exonuclease 1 OS=M...   118   2e-26
sp|Q5JIR6|ECX1_PYRKO Probable exosome complex exonuclease 1 OS=P...   110   5e-24
sp|Q8U0L9|ECX1_PYRFU Probable exosome complex exonuclease 1 OS=P...   110   5e-24
sp|O59223|ECX1_PYRHO Probable exosome complex exonuclease 1 OS=P...   108   1e-23
sp|Q8PTT8|ECX1_METMA Probable exosome complex exonuclease 1 OS=M...   108   2e-23
sp|Q8ZVM9|ECX1_PYRAE Probable exosome complex exonuclease 1 OS=P...   107   4e-23
sp|A8WQQ5|EXOS4_CAEBR Putative exosome complex exonuclease RRP41...   106   8e-23
sp|Q9V119|ECX1_PYRAB Probable exosome complex exonuclease 1 OS=P...   105   1e-22
sp|Q17533|EXOS4_CAEEL Putative exosome complex exonuclease RRP41...   105   2e-22
sp|Q9YC03|ECX1_AERPE Probable exosome complex exonuclease 1 OS=A...   104   2e-22
sp|O29757|ECX1_ARCFU Probable exosome complex exonuclease 1 OS=A...   104   3e-22
sp|Q97BZ5|ECX1_THEVO Probable exosome complex exonuclease 1 OS=T...    99   1e-20
sp|Q9HIP2|ECX1_THEAC Probable exosome complex exonuclease 1 OS=T...    98   2e-20
sp|O26779|ECX1_METTH Probable exosome complex exonuclease 1 OS=M...    97   5e-20
sp|O42872|RRP41_SCHPO Exosome complex component ski6 OS=Schizosa...    88   3e-17
sp|P46948|RRP41_YEAST Exosome complex component SKI6 OS=Saccharo...    83   7e-16
sp|Q6P0I8|EXOS6_DANRE Exosome complex exonuclease MTR3 OS=Danio ...    68   2e-11
sp|Q28F19|EXOS6_XENTR Exosome complex exonuclease MTR3 OS=Xenopu...    56   9e-08
sp|Q8BTW3|EXOS6_MOUSE Exosome complex exonuclease MTR3 OS=Mus mu...    54   3e-07
sp|Q5RKV6|EXOS6_HUMAN Exosome complex exonuclease MTR3 OS=Homo s...    51   3e-06
sp|Q2S8P0|RNPH_HAHCH Ribonuclease PH OS=Hahella chejuensis (stra...    51   4e-06
sp|Q9P7R3|MTR3_SCHPO Exosome complex component mtr3 OS=Schizosac...    50   5e-06
sp|A1T097|RNPH_PSYIN Ribonuclease PH OS=Psychromonas ingrahamii ...    50   7e-06
sp|Q2JEN8|RNPH_FRASC Ribonuclease PH OS=Frankia sp. (strain CcI3...    47   6e-05

>sp|Q921I9|EXOS4_MOUSE Exosome complex exonuclease RRP41 OS=Mus
           musculus GN=Exosc4 PE=2 SV=3
          Length = 245

 Score =  135 bits (341), Expect = 9e-32
 Identities = 70/130 (53%), Positives = 92/130 (70%), Gaps = 1/130 (0%)
 Frame = +3

Query: 129 LEFVSPEGLRLDGRRPTEMRQLRAKLGVVDKADGSATFEMGNTKVIAAVYGPHEVQ-NRG 305
           LE +S +G R+DGRR  E+R+++A++GV  +ADGSA  E GNTK +A VYGPHE++ +R 
Sbjct: 4   LELLSDQGYRIDGRRAGELRKIQARMGVFAQADGSAYIEQGNTKALAVVYGPHEIRGSRS 63

Query: 306 QQLFDQALVRCEYSMANFSTXXXXXXXXXXXXSVEISLVIRQSMEAAILTNLMPRTQIDI 485
           + L D+ALV C+YS A FST            S E+ L +RQ+ EAAILT L PR+QIDI
Sbjct: 64  RALPDRALVNCQYSSATFSTGERKRRPHGDRKSCEMGLQLRQTFEAAILTQLHPRSQIDI 123

Query: 486 FVHVLQADGG 515
           +V VLQADGG
Sbjct: 124 YVQVLQADGG 133


>sp|Q9NPD3|EXOS4_HUMAN Exosome complex exonuclease RRP41 OS=Homo
           sapiens GN=EXOSC4 PE=1 SV=3
          Length = 245

 Score =  135 bits (340), Expect = 1e-31
 Identities = 70/130 (53%), Positives = 92/130 (70%), Gaps = 1/130 (0%)
 Frame = +3

Query: 129 LEFVSPEGLRLDGRRPTEMRQLRAKLGVVDKADGSATFEMGNTKVIAAVYGPHEVQ-NRG 305
           LE +S +G R+DGRR  E+R+++A++GV  +ADGSA  E GNTK +A VYGPHE++ +R 
Sbjct: 4   LELLSDQGYRVDGRRAGELRKIQARMGVFAQADGSAYIEQGNTKALAVVYGPHEIRGSRA 63

Query: 306 QQLFDQALVRCEYSMANFSTXXXXXXXXXXXXSVEISLVIRQSMEAAILTNLMPRTQIDI 485
           + L D+ALV C+YS A FST            S E+ L +RQ+ EAAILT L PR+QIDI
Sbjct: 64  RALPDRALVNCQYSSATFSTGERKRRPHGDRKSCEMGLQLRQTFEAAILTQLHPRSQIDI 123

Query: 486 FVHVLQADGG 515
           +V VLQADGG
Sbjct: 124 YVQVLQADGG 133


>sp|Q7YRA3|EXOS4_BOVIN Exosome complex exonuclease RRP41 OS=Bos
           taurus GN=EXOSC4 PE=2 SV=3
          Length = 245

 Score =  135 bits (340), Expect = 1e-31
 Identities = 70/130 (53%), Positives = 92/130 (70%), Gaps = 1/130 (0%)
 Frame = +3

Query: 129 LEFVSPEGLRLDGRRPTEMRQLRAKLGVVDKADGSATFEMGNTKVIAAVYGPHEVQ-NRG 305
           LE +S +G R+DGRR  E+R+++A++GV  +ADGSA  E GNTK +A VYGPHE++ +R 
Sbjct: 4   LELLSDQGYRVDGRRAGELRKIQARMGVFAQADGSAYIEQGNTKALAVVYGPHEIRGSRA 63

Query: 306 QQLFDQALVRCEYSMANFSTXXXXXXXXXXXXSVEISLVIRQSMEAAILTNLMPRTQIDI 485
           + L D+ALV C+YS A FST            S E+ L +RQ+ EAAILT L PR+QIDI
Sbjct: 64  RALPDRALVNCQYSSATFSTGERKRRPHGDRKSCEMGLQLRQTFEAAILTQLHPRSQIDI 123

Query: 486 FVHVLQADGG 515
           +V VLQADGG
Sbjct: 124 YVQVLQADGG 133


>sp|Q975G8|ECX1_SULTO Probable exosome complex exonuclease 1
           OS=Sulfolobus tokodaii GN=ST0443 PE=3 SV=1
          Length = 247

 Score =  124 bits (311), Expect = 3e-28
 Identities = 66/125 (52%), Positives = 84/125 (67%)
 Frame = +3

Query: 150 GLRLDGRRPTEMRQLRAKLGVVDKADGSATFEMGNTKVIAAVYGPHEVQNRGQQLFDQAL 329
           GLRLDGR+P EMR ++ +LGV+  ADGSA FEMGNTKVIAAVYGP E+  R   L D+A+
Sbjct: 18  GLRLDGRKPDEMRPIKIELGVLKNADGSAIFEMGNTKVIAAVYGPKEMHPRHLALPDRAV 77

Query: 330 VRCEYSMANFSTXXXXXXXXXXXXSVEISLVIRQSMEAAILTNLMPRTQIDIFVHVLQAD 509
           +R  Y M  FST             +E+S VIR+++E+ IL  L PRT ID+F+ VLQAD
Sbjct: 78  LRVRYHMTPFST-DERKNPAPSRREIELSKVIREALESTILVELFPRTVIDVFMEVLQAD 136

Query: 510 GGNSI 524
            G  +
Sbjct: 137 AGTRL 141


>sp|Q9UXC2|ECX1_SULSO Probable exosome complex exonuclease 1
           OS=Sulfolobus solfataricus GN=SSO0735 PE=1 SV=1
          Length = 248

 Score =  120 bits (301), Expect = 4e-27
 Identities = 61/131 (46%), Positives = 85/131 (64%)
 Frame = +3

Query: 132 EFVSPEGLRLDGRRPTEMRQLRAKLGVVDKADGSATFEMGNTKVIAAVYGPHEVQNRGQQ 311
           + +  +G R DGR+P E+R ++ +LGV+  ADGSA FEMGNTK IAAVYGP E+  R   
Sbjct: 11  KLILDDGKRTDGRKPDELRSIKIELGVLKNADGSAIFEMGNTKAIAAVYGPKEMHPRHLS 70

Query: 312 LFDQALVRCEYSMANFSTXXXXXXXXXXXXSVEISLVIRQSMEAAILTNLMPRTQIDIFV 491
           L D+A++R  Y M  FST             +E+S VIR+++E+A+L  L PRT ID+F 
Sbjct: 71  LPDRAVLRVRYHMTPFST-DERKNPAPSRREIELSKVIREALESAVLVELFPRTAIDVFT 129

Query: 492 HVLQADGGNSI 524
            +LQAD G+ +
Sbjct: 130 EILQADAGSRL 140


>sp|Q4JB27|ECX1_SULAC Probable exosome complex exonuclease 1
           OS=Sulfolobus acidocaldarius GN=Saci_0610 PE=3 SV=1
          Length = 243

 Score =  119 bits (297), Expect = 1e-26
 Identities = 65/131 (49%), Positives = 84/131 (64%)
 Frame = +3

Query: 132 EFVSPEGLRLDGRRPTEMRQLRAKLGVVDKADGSATFEMGNTKVIAAVYGPHEVQNRGQQ 311
           + +   GLR DGR+  E+R ++ +LGV+  ADGSA FEMGNTKVIAAVYGP E+  R   
Sbjct: 8   KLILENGLRTDGRKLDELRPIKIELGVLKNADGSAIFEMGNTKVIAAVYGPKEMHPRHLA 67

Query: 312 LFDQALVRCEYSMANFSTXXXXXXXXXXXXSVEISLVIRQSMEAAILTNLMPRTQIDIFV 491
           L D+A +R  Y M  FST             +E+S VIR+++E+ IL NL PRT IDIF+
Sbjct: 68  LPDKASLRVRYHMTPFST-DERKNPAPSRREIELSKVIREALESTILLNLFPRTVIDIFM 126

Query: 492 HVLQADGGNSI 524
            VLQAD G  +
Sbjct: 127 EVLQADAGTRL 137


>sp|Q8TYC1|ECX1_METKA Probable exosome complex exonuclease 1
           OS=Methanopyrus kandleri GN=MK0381 PE=3 SV=1
          Length = 239

 Score =  118 bits (295), Expect = 2e-26
 Identities = 63/126 (50%), Positives = 84/126 (66%)
 Frame = +3

Query: 138 VSPEGLRLDGRRPTEMRQLRAKLGVVDKADGSATFEMGNTKVIAAVYGPHEVQNRGQQLF 317
           +S +GLRLDGR+P EMR L+ + GV+ +ADGSA  E+G  K++AAVYGP E+  R +Q  
Sbjct: 9   ISEDGLRLDGRKPDEMRPLKIQAGVLKRADGSAYLELGANKIVAAVYGPRELHPRHKQKP 68

Query: 318 DQALVRCEYSMANFSTXXXXXXXXXXXXSVEISLVIRQSMEAAILTNLMPRTQIDIFVHV 497
           D+A+VR  Y+MA FS             S+EIS + ++++E AI T   PRT IDIFV V
Sbjct: 69  DRAVVRFRYNMAPFSV-DERKRPGPDRRSIEISKLSKEALEPAIFTEYYPRTAIDIFVEV 127

Query: 498 LQADGG 515
           LQAD G
Sbjct: 128 LQADAG 133


>sp|Q5JIR6|ECX1_PYRKO Probable exosome complex exonuclease 1
           OS=Pyrococcus kodakaraensis GN=TK1634 PE=3 SV=1
          Length = 249

 Score =  110 bits (274), Expect = 5e-24
 Identities = 57/132 (43%), Positives = 83/132 (62%)
 Frame = +3

Query: 129 LEFVSPEGLRLDGRRPTEMRQLRAKLGVVDKADGSATFEMGNTKVIAAVYGPHEVQNRGQ 308
           L+ +   G R+DGR+  E+R ++ ++GV+  ADGSA  E G  KV+AAVYGP E+  +  
Sbjct: 8   LKLIDENGKRIDGRKKYELRPIKMEVGVLKNADGSAYVEWGKNKVLAAVYGPREIHPKHL 67

Query: 309 QLFDQALVRCEYSMANFSTXXXXXXXXXXXXSVEISLVIRQSMEAAILTNLMPRTQIDIF 488
           Q  D+A++R  Y+MA FS             SVEIS VIR ++E A+L ++ PRT ID+F
Sbjct: 68  QRPDRAILRVRYNMAPFSV-EERKKPGPDRRSVEISKVIRGALEPALLLHMFPRTAIDVF 126

Query: 489 VHVLQADGGNSI 524
           + +LQAD G  +
Sbjct: 127 IEILQADAGTRV 138


>sp|Q8U0L9|ECX1_PYRFU Probable exosome complex exonuclease 1
           OS=Pyrococcus furiosus GN=PF1568 PE=3 SV=1
          Length = 250

 Score =  110 bits (274), Expect = 5e-24
 Identities = 57/132 (43%), Positives = 82/132 (62%)
 Frame = +3

Query: 129 LEFVSPEGLRLDGRRPTEMRQLRAKLGVVDKADGSATFEMGNTKVIAAVYGPHEVQNRGQ 308
           L+ +   G RLDGR+  E+R ++ K+GV+  A+GSA  E G  K+IAAVYGP E+  +  
Sbjct: 8   LKLIDENGRRLDGRKKYELRPIKMKVGVLKNANGSAYIEWGKNKIIAAVYGPREIHPKHL 67

Query: 309 QLFDQALVRCEYSMANFSTXXXXXXXXXXXXSVEISLVIRQSMEAAILTNLMPRTQIDIF 488
           Q  D+A++R  Y+MA FS             S+EIS VIR ++E A++  + PRT ID+F
Sbjct: 68  QRPDRAILRVRYNMAPFSV-EERKKPGPDRRSIEISKVIRGALEPALILEMFPRTAIDVF 126

Query: 489 VHVLQADGGNSI 524
           + VLQAD G  +
Sbjct: 127 IEVLQADAGTRV 138


>sp|O59223|ECX1_PYRHO Probable exosome complex exonuclease 1
           OS=Pyrococcus horikoshii GN=PH1549 PE=3 SV=1
          Length = 249

 Score =  108 bits (271), Expect = 1e-23
 Identities = 55/132 (41%), Positives = 83/132 (62%)
 Frame = +3

Query: 129 LEFVSPEGLRLDGRRPTEMRQLRAKLGVVDKADGSATFEMGNTKVIAAVYGPHEVQNRGQ 308
           L+ +   G R+DGR+  E+R ++ K+GV+  A+GSA  E G  K+IAAVYGP E+ ++  
Sbjct: 8   LKLIDENGRRIDGRKKYELRPIKMKVGVLKNANGSAYIEWGRNKIIAAVYGPRELHSKHL 67

Query: 309 QLFDQALVRCEYSMANFSTXXXXXXXXXXXXSVEISLVIRQSMEAAILTNLMPRTQIDIF 488
           Q  D+A++R  Y+MA FS             S+EIS VI+ ++E A++  + PRT ID+F
Sbjct: 68  QRPDRAILRVRYNMAPFSV-EERKKPGPDRRSIEISKVIKGALEPALILEMFPRTSIDVF 126

Query: 489 VHVLQADGGNSI 524
           + VLQAD G  +
Sbjct: 127 IEVLQADAGTRV 138
tr_hit_id A9PK13
Definition tr|A9PK13|A9PK13_POPJC Putative uncharacterized protein OS=Populus jackii
Align length 129
Score (bit) 191.0
E-value 2.0e-47
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK955290|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0022_L04, 5'
         (525 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|A9PK13|A9PK13_POPJC Putative uncharacterized protein OS=Popul...   191   2e-47
tr|A5BIU1|A5BIU1_VITVI Putative uncharacterized protein (Chromos...   188   2e-46
tr|A9TY02|A9TY02_PHYPA Predicted protein OS=Physcomitrella paten...   171   2e-41
tr|B8BDD9|B8BDD9_ORYSI Putative uncharacterized protein OS=Oryza...   166   7e-40
tr|B4FDA8|B4FDA8_MAIZE Putative uncharacterized protein OS=Zea m...   163   6e-39
tr|B6T763|B6T763_MAIZE Exosome complex exonuclease RRP41 OS=Zea ...   162   7e-39
tr|Q9SP08|Q9SP08_ARATH Exonuclease RRP41 OS=Arabidopsis thaliana...   160   3e-38
tr|A8J275|A8J275_CHLRE 3'-5' exoribonuclease PH component of the...   152   1e-35
tr|A7S1D9|A7S1D9_NEMVE Predicted protein OS=Nematostella vectens...   147   2e-34
tr|B5X813|B5X813_SALSA Exosome complex exonuclease RRP41 OS=Salm...   141   2e-32
tr|Q6PBZ8|Q6PBZ8_DANRE Exosc4 protein (Exosome complex exonuclea...   139   9e-32
tr|Q28H58|Q28H58_XENTR Exosome component 4 (LOC549190 protein) O...   138   2e-31
tr|B7P8R1|B7P8R1_IXOSC Exosomal 3'-5' exoribonuclease complex, s...   137   2e-31
tr|Q5PQ94|Q5PQ94_XENLA LOC495942 protein OS=Xenopus laevis GN=LO...   136   6e-31
tr|B6M505|B6M505_BRAFL Putative uncharacterized protein OS=Branc...   136   7e-31
tr|B6LWQ9|B6LWQ9_BRAFL Putative uncharacterized protein OS=Branc...   136   7e-31
tr|Q542B0|Q542B0_MOUSE Putative uncharacterized protein OS=Mus m...   135   9e-31
tr|Q54EU6|Q54EU6_DICDI Putative uncharacterized protein OS=Dicty...   131   2e-29
tr|Q6K293|Q6K293_ORYSJ Putative exosome component 4 OS=Oryza sat...   130   4e-29
tr|B3RL48|B3RL48_TRIAD Putative uncharacterized protein OS=Trich...   130   5e-29
tr|B4P324|B4P324_DROYA GE11809 OS=Drosophila yakuba GN=GE11809 P...   128   2e-28
tr|B3NB10|B3NB10_DROER GG10219 OS=Drosophila erecta GN=GG10219 P...   128   2e-28
tr|Q16KB4|Q16KB4_AEDAE Exosome complex exonuclease RRP41, putati...   127   3e-28
tr|B4M9A1|B4M9A1_DROVI GJ18275 OS=Drosophila virilis GN=GJ18275 ...   126   6e-28
tr|B0XII7|B0XII7_CULQU Exosome complex exonuclease RRP41 OS=Cule...   126   6e-28
tr|B4KHM2|B4KHM2_DROMO GI10716 OS=Drosophila mojavensis GN=GI107...   126   7e-28
tr|B4JCT4|B4JCT4_DROGR GH10637 OS=Drosophila grimshawi GN=GH1063...   126   7e-28
tr|B3MN36|B3MN36_DROAN GF15621 OS=Drosophila ananassae GN=GF1562...   126   7e-28
tr|Q29KH8|Q29KH8_DROPS GA13761 OS=Drosophila pseudoobscura pseud...   125   1e-27
tr|B4MX14|B4MX14_DROWI GK15569 OS=Drosophila willistoni GN=GK155...   125   1e-27

>tr|A9PK13|A9PK13_POPJC Putative uncharacterized protein OS=Populus
           jackii PE=2 SV=1
          Length = 241

 Score =  191 bits (484), Expect = 2e-47
 Identities = 98/129 (75%), Positives = 106/129 (82%)
 Frame = +3

Query: 129 LEFVSPEGLRLDGRRPTEMRQLRAKLGVVDKADGSATFEMGNTKVIAAVYGPHEVQNRGQ 308
           +EFV+PEGLRLDGRRP EMRQLRA++G V KADGSA FEMGNTKVIAAVYGP EVQNR Q
Sbjct: 1   MEFVNPEGLRLDGRRPMEMRQLRAQIGAVAKADGSAVFEMGNTKVIAAVYGPREVQNRSQ 60

Query: 309 QLFDQALVRCEYSMANFSTXXXXXXXXXXXXSVEISLVIRQSMEAAILTNLMPRTQIDIF 488
           Q+ DQALVRCEYSMANFST            S EISLVIRQ+ME  ILTNLMPR+QIDI+
Sbjct: 61  QINDQALVRCEYSMANFSTGDRRRKPKGDRRSTEISLVIRQAMEECILTNLMPRSQIDIY 120

Query: 489 VHVLQADGG 515
           V VLQADGG
Sbjct: 121 VQVLQADGG 129


>tr|A5BIU1|A5BIU1_VITVI Putative uncharacterized protein (Chromosome
           chr15 scaffold_40, whole genome shotgun sequence)
           OS=Vitis vinifera GN=GSVIVT00026977001 PE=4 SV=1
          Length = 241

 Score =  188 bits (477), Expect = 2e-46
 Identities = 96/129 (74%), Positives = 106/129 (82%)
 Frame = +3

Query: 129 LEFVSPEGLRLDGRRPTEMRQLRAKLGVVDKADGSATFEMGNTKVIAAVYGPHEVQNRGQ 308
           +EFVSPEGLRLDGRRP EMRQ+R ++G V KADGSA FEMGNTKVIAAVYGP EV+NR Q
Sbjct: 1   MEFVSPEGLRLDGRRPMEMRQIRGEIGAVAKADGSAFFEMGNTKVIAAVYGPREVENRSQ 60

Query: 309 QLFDQALVRCEYSMANFSTXXXXXXXXXXXXSVEISLVIRQSMEAAILTNLMPRTQIDIF 488
           Q+ DQALVRCEY+MANFST            S EISLVIRQ+MEA ILT+LMPR+QIDIF
Sbjct: 61  QISDQALVRCEYTMANFSTGDRMRKPKGDRRSTEISLVIRQTMEACILTHLMPRSQIDIF 120

Query: 489 VHVLQADGG 515
           V VLQADGG
Sbjct: 121 VQVLQADGG 129


>tr|A9TY02|A9TY02_PHYPA Predicted protein OS=Physcomitrella patens
           subsp. patens GN=PHYPADRAFT_110596 PE=4 SV=1
          Length = 246

 Score =  171 bits (433), Expect = 2e-41
 Identities = 87/131 (66%), Positives = 101/131 (77%)
 Frame = +3

Query: 123 MALEFVSPEGLRLDGRRPTEMRQLRAKLGVVDKADGSATFEMGNTKVIAAVYGPHEVQNR 302
           MA EFVSPEGLRLDGRRP EMR L A +GVV  ADGSA F MGNT+V+A VYGPHEV N+
Sbjct: 1   MATEFVSPEGLRLDGRRPPEMRHLHAVVGVVPSADGSALFHMGNTQVMAVVYGPHEVHNK 60

Query: 303 GQQLFDQALVRCEYSMANFSTXXXXXXXXXXXXSVEISLVIRQSMEAAILTNLMPRTQID 482
             QL D+ALVRCEYSMA FST            + E+SLVI Q++EAAI+T+L+PR+QID
Sbjct: 61  AHQLHDKALVRCEYSMAAFSTGERRRRGKTDRRATELSLVIGQTLEAAIMTHLLPRSQID 120

Query: 483 IFVHVLQADGG 515
           I+V VLQADGG
Sbjct: 121 IYVQVLQADGG 131


>tr|B8BDD9|B8BDD9_ORYSI Putative uncharacterized protein OS=Oryza
           sativa subsp. indica GN=OsI_30553 PE=4 SV=1
          Length = 242

 Score =  166 bits (420), Expect = 7e-40
 Identities = 88/131 (67%), Positives = 105/131 (80%), Gaps = 2/131 (1%)
 Frame = +3

Query: 129 LEFVSP-EGLRLDGRRPTEMRQLRAKLGVVDKADGSATFEMGNTKVIAAVYGPHEVQNRG 305
           +E+V+P  G R+DGRRP EMRQL+ ++GVV +ADGSA FEMGNT+VIAAVYGP EVQN+G
Sbjct: 1   MEYVNPLTGFRVDGRRPNEMRQLKGEVGVVARADGSALFEMGNTRVIAAVYGPREVQNKG 60

Query: 306 QQLFDQ-ALVRCEYSMANFSTXXXXXXXXXXXXSVEISLVIRQSMEAAILTNLMPRTQID 482
           QQ+  + ALVRCEY MA+FST            S EISLVIRQ+MEA+ILT+LMPR+QID
Sbjct: 61  QQVNSKDALVRCEYRMADFSTGDRRRKPKGDRRSTEISLVIRQTMEASILTHLMPRSQID 120

Query: 483 IFVHVLQADGG 515
           IFV VLQADGG
Sbjct: 121 IFVQVLQADGG 131


>tr|B4FDA8|B4FDA8_MAIZE Putative uncharacterized protein OS=Zea mays
           PE=2 SV=1
          Length = 242

 Score =  163 bits (412), Expect = 6e-39
 Identities = 86/131 (65%), Positives = 103/131 (78%), Gaps = 2/131 (1%)
 Frame = +3

Query: 129 LEFVSP-EGLRLDGRRPTEMRQLRAKLGVVDKADGSATFEMGNTKVIAAVYGPHEVQNRG 305
           +E+V+P  G R+DGRRP EMRQL+ ++GVV +ADGSA FEMGNT+VIAAVYGP EVQN+G
Sbjct: 1   MEYVNPLTGFRVDGRRPNEMRQLKGEVGVVARADGSALFEMGNTRVIAAVYGPREVQNKG 60

Query: 306 QQL-FDQALVRCEYSMANFSTXXXXXXXXXXXXSVEISLVIRQSMEAAILTNLMPRTQID 482
           QQ+   +ALVRCEY MA FST            S EISLVIRQ+MEA+ILT+LMP +QID
Sbjct: 61  QQVNSKEALVRCEYRMAEFSTGDRRRKPKGDRRSTEISLVIRQTMEASILTHLMPHSQID 120

Query: 483 IFVHVLQADGG 515
           I+V VLQADGG
Sbjct: 121 IYVQVLQADGG 131


>tr|B6T763|B6T763_MAIZE Exosome complex exonuclease RRP41 OS=Zea
           mays PE=2 SV=1
          Length = 242

 Score =  162 bits (411), Expect = 7e-39
 Identities = 86/131 (65%), Positives = 103/131 (78%), Gaps = 2/131 (1%)
 Frame = +3

Query: 129 LEFVSP-EGLRLDGRRPTEMRQLRAKLGVVDKADGSATFEMGNTKVIAAVYGPHEVQNRG 305
           +E+V+P  G R+DGRRP EMRQL+ ++GVV +ADGSA FEMGNT+VIAAVYGP EVQN+G
Sbjct: 1   MEYVNPLTGFRVDGRRPNEMRQLKGEVGVVVRADGSALFEMGNTRVIAAVYGPREVQNKG 60

Query: 306 QQL-FDQALVRCEYSMANFSTXXXXXXXXXXXXSVEISLVIRQSMEAAILTNLMPRTQID 482
           QQ+   +ALVRCEY MA FST            S EISLVIRQ+MEA+ILT+LMP +QID
Sbjct: 61  QQVNSKEALVRCEYRMAEFSTGDRRRKPKGDRRSTEISLVIRQTMEASILTHLMPHSQID 120

Query: 483 IFVHVLQADGG 515
           I+V VLQADGG
Sbjct: 121 IYVQVLQADGG 131


>tr|Q9SP08|Q9SP08_ARATH Exonuclease RRP41 OS=Arabidopsis thaliana
           GN=RRP41 PE=2 SV=1
          Length = 241

 Score =  160 bits (406), Expect = 3e-38
 Identities = 87/130 (66%), Positives = 100/130 (76%), Gaps = 1/130 (0%)
 Frame = +3

Query: 129 LEFVSPEGLRLDGRRPTEMRQLRAKLGVVDKADGSATFEMGNTKVIAAVYGPHEVQNRGQ 308
           +E+V+PEGLRLDGRR  EMRQ+ A++GVV KADGSA FEMGNTKVIAAVYGP E+QN+ Q
Sbjct: 1   MEYVNPEGLRLDGRRFNEMRQIVAEVGVVSKADGSAVFEMGNTKVIAAVYGPREIQNKSQ 60

Query: 309 Q-LFDQALVRCEYSMANFSTXXXXXXXXXXXXSVEISLVIRQSMEAAILTNLMPRTQIDI 485
           Q   D A+V CEYSMA FST            S E+SLVIRQ+MEA ILT LMP +QIDI
Sbjct: 61  QKKNDHAVVLCEYSMAQFST-GDRRRQKFDRRSTELSLVIRQTMEACILTELMPHSQIDI 119

Query: 486 FVHVLQADGG 515
           F+ VLQADGG
Sbjct: 120 FLQVLQADGG 129


>tr|A8J275|A8J275_CHLRE 3'-5' exoribonuclease PH component of the
           exosome OS=Chlamydomonas reinhardtii GN=RNPH1 PE=4 SV=1
          Length = 245

 Score =  152 bits (383), Expect = 1e-35
 Identities = 75/129 (58%), Positives = 95/129 (73%)
 Frame = +3

Query: 129 LEFVSPEGLRLDGRRPTEMRQLRAKLGVVDKADGSATFEMGNTKVIAAVYGPHEVQNRGQ 308
           +EFVSPEGLRLDGRRP E+R++  +L V+  ADGSA FEMGNTKV+AAV+GPH V  R +
Sbjct: 1   MEFVSPEGLRLDGRRPRELRRINCQLDVLSNADGSAIFEMGNTKVLAAVFGPHAVTRRSE 60

Query: 309 QLFDQALVRCEYSMANFSTXXXXXXXXXXXXSVEISLVIRQSMEAAILTNLMPRTQIDIF 488
              + ALV CEYSMA FST            S E+S+VIR ++E A++T L+PR+QID++
Sbjct: 61  LREEGALVVCEYSMAAFSTGERRRRGKGDRRSTELSMVIRNTLEQAVITELLPRSQIDVY 120

Query: 489 VHVLQADGG 515
           V VLQADGG
Sbjct: 121 VQVLQADGG 129


>tr|A7S1D9|A7S1D9_NEMVE Predicted protein OS=Nematostella vectensis
           GN=v1g165257 PE=4 SV=1
          Length = 247

 Score =  147 bits (372), Expect = 2e-34
 Identities = 70/132 (53%), Positives = 97/132 (73%)
 Frame = +3

Query: 129 LEFVSPEGLRLDGRRPTEMRQLRAKLGVVDKADGSATFEMGNTKVIAAVYGPHEVQNRGQ 308
           LE +SPEGLR+DGR+ +E+R++  K+GV+ +ADGSA  EMGNTK +A VYGPHEVQN+ +
Sbjct: 4   LEVLSPEGLRIDGRKASELRKMVCKVGVLSQADGSAYIEMGNTKALATVYGPHEVQNKAK 63

Query: 309 QLFDQALVRCEYSMANFSTXXXXXXXXXXXXSVEISLVIRQSMEAAILTNLMPRTQIDIF 488
            L D+ L+  ++ MA FST            + E+S+++R++ EAAIL NL PR+QIDI+
Sbjct: 64  ALHDRVLLNVQFGMATFSTGERKKKPRGDRKATELSMMVRRTFEAAILINLYPRSQIDIY 123

Query: 489 VHVLQADGGNSI 524
           V VLQADGGN +
Sbjct: 124 VQVLQADGGNHV 135


>tr|B5X813|B5X813_SALSA Exosome complex exonuclease RRP41 OS=Salmo
           salar GN=EXOS4 PE=2 SV=1
          Length = 245

 Score =  141 bits (355), Expect = 2e-32
 Identities = 69/131 (52%), Positives = 96/131 (73%), Gaps = 1/131 (0%)
 Frame = +3

Query: 129 LEFVSPEGLRLDGRRPTEMRQLRAKLGVVDKADGSATFEMGNTKVIAAVYGPHEVQ-NRG 305
           LE +S +G RLDGR+  E+R+++A++GV  +ADGSA  E GNTK +A VYGPHEV+ +R 
Sbjct: 4   LELLSDQGYRLDGRKAAELRKVQARMGVFAQADGSAYIEQGNTKALAVVYGPHEVRGSRS 63

Query: 306 QQLFDQALVRCEYSMANFSTXXXXXXXXXXXXSVEISLVIRQSMEAAILTNLMPRTQIDI 485
           + L D+A++ C+YSMA FST            S E+SL ++Q+ EAA+LTNL PR+QIDI
Sbjct: 64  KTLHDRAVINCQYSMATFSTAERKRRPHGDRKSTEMSLHLKQTFEAAVLTNLYPRSQIDI 123

Query: 486 FVHVLQADGGN 518
           +V +LQ+DGGN
Sbjct: 124 YVKILQSDGGN 134