NBDC - アーカイブトップ - ヘルプ
データベースの説明 | データ項目の説明 | ダウンロード | 利用許諾 | ヘルプ
AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
NBDC - LSDB Archive
Description of this DB | Description of data items | Download | License
AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
DK955291
Clone id TST39A01NGRL0022_L07
Library
Length 534
Definition Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0022_L07. 5' end sequence.
Accession
Tissue type prothallia with plantlets
Developmental stage gametophytes with sporophytes
Contig ID
Sequence 
GTGAGCCTTTGATATGGCAACAATGGCGGCTGCAGCGCTTTCTTCAAGCACCTTCGCCGG
CCAGGCTGTGTATAAGCCCCAGAGCGAGCTGAGCTCTAAGGTAGTCAATGTGGGCGAGGC
CCGCGTGTCCATGAGGAAAACAGTGTCAAAGAGCTCCGACAGCCCCTGGTATGGCCCCGA
CCGCGTGAAGTACCTTGGCCCTTTCTCCGGCGAGGCCCCCAGCTATCTCAAGGGAGAATT
TCCCGGCGACTACGGCTGGGACACCGCCGGCCTGTCTGCCGACCCTGAGACCTTCGCCAA
GAACCGGGAGCTGGAGGTGATTCACGCACGGTGGGCTATGTTGGGAGCCCTGGGCTGCGT
GACCCCCGAGCTGCTGGCCAAGAATGGTGTGAAGTTTGGCGAGGCCGTGTGGTTCAAGGC
TGGCTCGCAGATCTTTGCTGAGGGTGGGCTTGACTACTTGGGCAACCCCAGCCTCGTCCA
CGCTCAGAGCATTCTGGCCATCTGGGCATGTCAGGTAAATCTTCATGGGCGCTG
■■Homology search results ■■ -
sp_hit_id P20866
Definition sp|P20866|CB2_PHYPA Chlorophyll a-b binding protein, chloroplastic OS=Physcomitrella patens
Align length 159
Score (bit) 265.0
E-value 1.0e-70
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK955291|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0022_L07, 5'
         (534 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|P20866|CB2_PHYPA Chlorophyll a-b binding protein, chloroplast...   265   1e-70
sp|P27493|CB22_TOBAC Chlorophyll a-b binding protein 21, chlorop...   262   7e-70
sp|P12329|CB21_MAIZE Chlorophyll a-b binding protein 1, chloropl...   261   1e-69
sp|P12333|CB2A_SPIOL Chlorophyll a-b binding protein, chloroplas...   261   2e-69
sp|P12332|CB21_SILPR Chlorophyll a-b binding protein, chloroplas...   261   2e-69
sp|P14278|CB24_SOLLC Chlorophyll a-b binding protein 4, chloropl...   260   3e-69
sp|P04782|CB24_PETSP Chlorophyll a-b binding protein 25, chlorop...   260   3e-69
sp|P07370|CB2B_SOLLC Chlorophyll a-b binding protein 1B, chlorop...   260   3e-69
sp|P27496|CB25_TOBAC Chlorophyll a-b binding protein 50, chlorop...   260   3e-69
sp|P27492|CB21_TOBAC Chlorophyll a-b binding protein 16, chlorop...   260   3e-69
sp|P07369|CB2G_SOLLC Chlorophyll a-b binding protein 3C, chlorop...   259   4e-69
sp|P27495|CB24_TOBAC Chlorophyll a-b binding protein 40, chlorop...   259   4e-69
sp|P12470|CB25_NICPL Chlorophyll a-b binding protein E, chloropl...   259   7e-69
sp|P27497|CB29_MAIZE Chlorophyll a-b binding protein M9, chlorop...   258   1e-68
sp|P27491|CB27_TOBAC Chlorophyll a-b binding protein 7, chloropl...   258   1e-68
sp|P27518|CB21_GOSHI Chlorophyll a-b binding protein 151, chloro...   258   1e-68
sp|P08221|CB21_CUCSA Chlorophyll a-b binding protein of LHCII ty...   258   1e-68
sp|P92919|CB23_APIGR Chlorophyll a-b binding protein, chloroplas...   258   1e-68
sp|P08963|CB22_HORVU Chlorophyll a-b binding protein 2, chloropl...   258   1e-68
sp|P09756|CB23_SOYBN Chlorophyll a-b binding protein 3, chloropl...   257   3e-68
sp|P06671|CB22_MAIZE Chlorophyll a-b binding protein, chloroplas...   257   3e-68
sp|P04783|CB25_PETSP Chlorophyll a-b binding protein 91R, chloro...   256   4e-68
sp|P04781|CB23_PETSP Chlorophyll a-b binding protein 22R, chloro...   256   4e-68
sp|P12469|CB23_NICPL Chlorophyll a-b binding protein C, chloropl...   255   8e-68
sp|P15195|CB23_POLMU Chlorophyll a-b binding protein type 1 memb...   255   1e-67
sp|P04780|CB22_PETSP Chlorophyll a-b binding protein 22L, chloro...   254   2e-67
sp|P04779|CB21_PETSP Chlorophyll a-b binding protein 13, chlorop...   253   3e-67
sp|P15194|CB2B_PINSY Chlorophyll a-b binding protein type 2 memb...   253   4e-67
sp|P12471|CB21_SOYBN Chlorophyll a-b binding protein, chloroplas...   253   5e-67
sp|P15193|CB2A_PINSY Chlorophyll a-b binding protein type 2 memb...   252   7e-67

>sp|P20866|CB2_PHYPA Chlorophyll a-b binding protein, chloroplastic
           OS=Physcomitrella patens PE=3 SV=1
          Length = 269

 Score =  265 bits (676), Expect = 1e-70
 Identities = 129/159 (81%), Positives = 143/159 (89%), Gaps = 2/159 (1%)
 Frame = +2

Query: 59  GQAVYKPQSELSSKVVNVGEARVSMRKTVSKS--SDSPWYGPDRVKYLGPFSGEAPSYLK 232
           GQ++ KP +ELS KV+   EARV+MR+TVSKS  SD+ WYG DR K+LGPFSGE PSYL 
Sbjct: 14  GQSLVKPVNELSRKVLGNVEARVTMRRTVSKSAGSDTIWYGADRPKFLGPFSGETPSYLN 73

Query: 233 GEFPGDYGWDTAGLSADPETFAKNRELEVIHARWAMLGALGCVTPELLAKNGVKFGEAVW 412
           GEF GDYGWDTAGLS+DPETFA+NRELEVIHARWAMLGALGC+TPELLAK+GVKFGEAVW
Sbjct: 74  GEFAGDYGWDTAGLSSDPETFARNRELEVIHARWAMLGALGCLTPELLAKSGVKFGEAVW 133

Query: 413 FKAGSQIFAEGGLDYLGNPSLVHAQSILAIWACQVNLHG 529
           FKAG+QIF+EGGLDYLGNPSLVHAQSILAIWACQV L G
Sbjct: 134 FKAGAQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMG 172



 Score = 30.8 bits (68), Expect = 4.3
 Identities = 16/50 (32%), Positives = 26/50 (52%)
 Frame = +2

Query: 239 FPGDYGWDTAGLSADPETFAKNRELEVIHARWAMLGALGCVTPELLAKNG 388
           +PG   +D  GL+ DP+TFA+ +  E+ + R AM    G     ++   G
Sbjct: 192 YPGG-SFDPLGLADDPDTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKG 240


>sp|P27493|CB22_TOBAC Chlorophyll a-b binding protein 21,
           chloroplastic OS=Nicotiana tabacum GN=CAB21 PE=2 SV=1
          Length = 265

 Score =  262 bits (670), Expect = 7e-70
 Identities = 126/141 (89%), Positives = 131/141 (92%), Gaps = 2/141 (1%)
 Frame = +2

Query: 113 GEARVSMRKTVSK--SSDSPWYGPDRVKYLGPFSGEAPSYLKGEFPGDYGWDTAGLSADP 286
           G  RVSMRKTV+K  +S SPWYGPDRVKYLGPFSGE+PSYL GEFPGDYGWDTAGLSADP
Sbjct: 29  GNGRVSMRKTVAKPVASSSPWYGPDRVKYLGPFSGESPSYLTGEFPGDYGWDTAGLSADP 88

Query: 287 ETFAKNRELEVIHARWAMLGALGCVTPELLAKNGVKFGEAVWFKAGSQIFAEGGLDYLGN 466
           ETFAKNRELEVIH RWAMLGALGCV PELLA+NGVKFGEAVWFKAGSQIF+EGGLDYLGN
Sbjct: 89  ETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGN 148

Query: 467 PSLVHAQSILAIWACQVNLHG 529
           PSLVHAQSILAIWACQV L G
Sbjct: 149 PSLVHAQSILAIWACQVILMG 169


>sp|P12329|CB21_MAIZE Chlorophyll a-b binding protein 1,
           chloroplastic OS=Zea mays GN=CAB1 PE=3 SV=1
          Length = 262

 Score =  261 bits (668), Expect = 1e-69
 Identities = 125/148 (84%), Positives = 134/148 (90%), Gaps = 4/148 (2%)
 Frame = +2

Query: 98  KVVNVGEARVSMRKTVSK----SSDSPWYGPDRVKYLGPFSGEAPSYLKGEFPGDYGWDT 265
           KV + GE R++MRKTV K    +S SPWYGPDRVKYLGPFSGE PSYL GEFPGDYGWDT
Sbjct: 19  KVGSFGEGRITMRKTVGKPKVAASGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDT 78

Query: 266 AGLSADPETFAKNRELEVIHARWAMLGALGCVTPELLAKNGVKFGEAVWFKAGSQIFAEG 445
           AGLSADPETFAKNRELEVIH+RWAMLGALGCV PELL++NGVKFGEAVWFKAGSQIF+EG
Sbjct: 79  AGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEG 138

Query: 446 GLDYLGNPSLVHAQSILAIWACQVNLHG 529
           GLDYLGNPSL+HAQSILAIWACQV L G
Sbjct: 139 GLDYLGNPSLIHAQSILAIWACQVVLMG 166


>sp|P12333|CB2A_SPIOL Chlorophyll a-b binding protein, chloroplastic
           OS=Spinacia oleracea PE=1 SV=1
          Length = 267

 Score =  261 bits (666), Expect = 2e-69
 Identities = 124/144 (86%), Positives = 130/144 (90%), Gaps = 4/144 (2%)
 Frame = +2

Query: 110 VGEARVSMRKTVSK----SSDSPWYGPDRVKYLGPFSGEAPSYLKGEFPGDYGWDTAGLS 277
           +GE R++MRKT  K     S SPWYGPDRVKYLGPFSGE+PSYL GEFPGDYGWDTAGLS
Sbjct: 28  IGEGRITMRKTAGKPKTVQSSSPWYGPDRVKYLGPFSGESPSYLTGEFPGDYGWDTAGLS 87

Query: 278 ADPETFAKNRELEVIHARWAMLGALGCVTPELLAKNGVKFGEAVWFKAGSQIFAEGGLDY 457
           ADPETFAKNRELEVIH RWAMLGALGCV PELLA+NGVKFGEAVWFKAGSQIF+EGGLDY
Sbjct: 88  ADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDY 147

Query: 458 LGNPSLVHAQSILAIWACQVNLHG 529
           LGNPSLVHAQSILAIWACQV L G
Sbjct: 148 LGNPSLVHAQSILAIWACQVILMG 171


>sp|P12332|CB21_SILPR Chlorophyll a-b binding protein, chloroplastic
           (Fragment) OS=Silene pratensis PE=2 SV=2
          Length = 205

 Score =  261 bits (666), Expect = 2e-69
 Identities = 127/157 (80%), Positives = 135/157 (85%)
 Frame = +2

Query: 59  GQAVYKPQSELSSKVVNVGEARVSMRKTVSKSSDSPWYGPDRVKYLGPFSGEAPSYLKGE 238
           GQ + KPQ+EL  KV   G  RVSMR+T+  + +S WYGPDR KYLGPFS + PSYL GE
Sbjct: 13  GQTLLKPQNELVRKVGGNG-GRVSMRRTIKSAPESIWYGPDRPKYLGPFSEQTPSYLTGE 71

Query: 239 FPGDYGWDTAGLSADPETFAKNRELEVIHARWAMLGALGCVTPELLAKNGVKFGEAVWFK 418
           FPGDYGWDTAGLSADPETFAKNRELEVIH RWAMLGALGCV PELLAKNGVKFGEAVWFK
Sbjct: 72  FPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLAKNGVKFGEAVWFK 131

Query: 419 AGSQIFAEGGLDYLGNPSLVHAQSILAIWACQVNLHG 529
           AGSQIF EGGLDYLGNP+LVHAQSILAIWACQV L G
Sbjct: 132 AGSQIFQEGGLDYLGNPNLVHAQSILAIWACQVVLMG 168


>sp|P14278|CB24_SOLLC Chlorophyll a-b binding protein 4,
           chloroplastic OS=Solanum lycopersicum GN=CAB4 PE=2 SV=1
          Length = 265

 Score =  260 bits (665), Expect = 3e-69
 Identities = 124/157 (78%), Positives = 135/157 (85%)
 Frame = +2

Query: 59  GQAVYKPQSELSSKVVNVGEARVSMRKTVSKSSDSPWYGPDRVKYLGPFSGEAPSYLKGE 238
           GQAV K Q+E   KV N GE R++MR+TV  +  S WYG DR KYLGPFS + PSYL GE
Sbjct: 13  GQAVGKSQNEFIRKVGNFGEGRITMRRTVKSAPQSIWYGEDRPKYLGPFSEQTPSYLTGE 72

Query: 239 FPGDYGWDTAGLSADPETFAKNRELEVIHARWAMLGALGCVTPELLAKNGVKFGEAVWFK 418
           FPGDYGWDTAGLSADPETFA+NRELEVIH RWAMLGALGCV PE+L+KNGVKFGEAVWFK
Sbjct: 73  FPGDYGWDTAGLSADPETFARNRELEVIHCRWAMLGALGCVFPEILSKNGVKFGEAVWFK 132

Query: 419 AGSQIFAEGGLDYLGNPSLVHAQSILAIWACQVNLHG 529
           AGSQIF+EGGLDYLGNP+LVHAQSILAIWACQV L G
Sbjct: 133 AGSQIFSEGGLDYLGNPNLVHAQSILAIWACQVVLMG 169


>sp|P04782|CB24_PETSP Chlorophyll a-b binding protein 25,
           chloroplastic OS=Petunia sp. GN=CAB25 PE=3 SV=1
          Length = 266

 Score =  260 bits (665), Expect = 3e-69
 Identities = 129/160 (80%), Positives = 135/160 (84%), Gaps = 11/160 (6%)
 Frame = +2

Query: 83  SELSSKVVNV-------GEARVSMRKTVSK----SSDSPWYGPDRVKYLGPFSGEAPSYL 229
           S  + K VNV       G  + +MRKTV+K    SS SPWYGPDRVKYLGPFSGEAPSYL
Sbjct: 11  SSFAGKAVNVPSSSQITGNGKATMRKTVTKAKPVSSGSPWYGPDRVKYLGPFSGEAPSYL 70

Query: 230 KGEFPGDYGWDTAGLSADPETFAKNRELEVIHARWAMLGALGCVTPELLAKNGVKFGEAV 409
            GEFPGDYGWDTAGLSADPETFAKNRELEVIH RWAMLGALGCV PEL A+NGVKFGEAV
Sbjct: 71  TGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELFARNGVKFGEAV 130

Query: 410 WFKAGSQIFAEGGLDYLGNPSLVHAQSILAIWACQVNLHG 529
           WFKAGSQIF+EGGLDYLGNPSLVHAQSILAIWACQV L G
Sbjct: 131 WFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMG 170


>sp|P07370|CB2B_SOLLC Chlorophyll a-b binding protein 1B,
           chloroplastic OS=Solanum lycopersicum GN=CAB1B PE=3 SV=1
          Length = 265

 Score =  260 bits (664), Expect = 3e-69
 Identities = 124/141 (87%), Positives = 130/141 (92%), Gaps = 2/141 (1%)
 Frame = +2

Query: 113 GEARVSMRKTVSKS--SDSPWYGPDRVKYLGPFSGEAPSYLKGEFPGDYGWDTAGLSADP 286
           G  R++MRK V+KS  S SPWYGPDRVKYLGPFSGE+PSYL GEFPGDYGWDTAGLSADP
Sbjct: 29  GNGRITMRKAVAKSAPSSSPWYGPDRVKYLGPFSGESPSYLTGEFPGDYGWDTAGLSADP 88

Query: 287 ETFAKNRELEVIHARWAMLGALGCVTPELLAKNGVKFGEAVWFKAGSQIFAEGGLDYLGN 466
           ETFAKNRELEVIH RWAMLGALGCV PELLA+NGVKFGEAVWFKAGSQIF+EGGLDYLGN
Sbjct: 89  ETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGN 148

Query: 467 PSLVHAQSILAIWACQVNLHG 529
           PSLVHAQSILAIWACQV L G
Sbjct: 149 PSLVHAQSILAIWACQVVLMG 169


>sp|P27496|CB25_TOBAC Chlorophyll a-b binding protein 50,
           chloroplastic OS=Nicotiana tabacum GN=CAB50 PE=2 SV=1
          Length = 267

 Score =  260 bits (664), Expect = 3e-69
 Identities = 125/143 (87%), Positives = 131/143 (91%), Gaps = 4/143 (2%)
 Frame = +2

Query: 113 GEARVSMRKTVSK----SSDSPWYGPDRVKYLGPFSGEAPSYLKGEFPGDYGWDTAGLSA 280
           G  +V+MRKTV+K    SS SPWYGPDRVKYLGPFSGE+PSYL GEFPGDYGWDTAGLSA
Sbjct: 29  GNGKVTMRKTVTKAKPLSSGSPWYGPDRVKYLGPFSGESPSYLTGEFPGDYGWDTAGLSA 88

Query: 281 DPETFAKNRELEVIHARWAMLGALGCVTPELLAKNGVKFGEAVWFKAGSQIFAEGGLDYL 460
           DPETFAKNRELEVIH RWAMLGALGCV PELLA+NGVKFGEAVWFKAGSQIF+EGGLDYL
Sbjct: 89  DPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYL 148

Query: 461 GNPSLVHAQSILAIWACQVNLHG 529
           GNPSLVHAQSILAIWACQV L G
Sbjct: 149 GNPSLVHAQSILAIWACQVVLMG 171


>sp|P27492|CB21_TOBAC Chlorophyll a-b binding protein 16,
           chloroplastic OS=Nicotiana tabacum GN=CAB16 PE=2 SV=1
          Length = 266

 Score =  260 bits (664), Expect = 3e-69
 Identities = 129/153 (84%), Positives = 135/153 (88%), Gaps = 4/153 (2%)
 Frame = +2

Query: 83  SELSSKVVNVGEARVSMRKTVSK----SSDSPWYGPDRVKYLGPFSGEAPSYLKGEFPGD 250
           S  SS+V   G  +V+MRKT SK    SS SPWYGPDRVKYLGPFSGE+PSYL GEFPGD
Sbjct: 20  SPSSSEVT--GNGKVTMRKTASKAKPVSSGSPWYGPDRVKYLGPFSGESPSYLTGEFPGD 77

Query: 251 YGWDTAGLSADPETFAKNRELEVIHARWAMLGALGCVTPELLAKNGVKFGEAVWFKAGSQ 430
           YGWDTAGLSADPETFAKNRELEVIH RWAMLGALGCV PELLA+NGVKFGEAVWFKAGSQ
Sbjct: 78  YGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQ 137

Query: 431 IFAEGGLDYLGNPSLVHAQSILAIWACQVNLHG 529
           IF+EGGLDYLGNPSLVHAQSILAIWACQV L G
Sbjct: 138 IFSEGGLDYLGNPSLVHAQSILAIWACQVVLMG 170
tr_hit_id A9RNP2
Definition tr|A9RNP2|A9RNP2_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens
Align length 157
Score (bit) 272.0
E-value 9.0e-72
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK955291|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0022_L07, 5'
         (534 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|A9RNP2|A9RNP2_PHYPA Predicted protein OS=Physcomitrella paten...   272   9e-72
tr|Q9SXW8|Q9SXW8_PHYPA Chlorophyll a/b-binding protein OS=Physco...   271   2e-71
tr|A9T769|A9T769_PHYPA Predicted protein OS=Physcomitrella paten...   271   2e-71
tr|Q39768|Q39768_GINBI Light-harvesting chlorophyll a/b binding ...   269   8e-71
tr|A9RAS2|A9RAS2_PHYPA Predicted protein OS=Physcomitrella paten...   266   5e-70
tr|A9S6F4|A9S6F4_PHYPA Predicted protein OS=Physcomitrella paten...   266   6e-70
tr|O04687|O04687_MESCR Chlorophyll a/b-binding protein OS=Mesemb...   264   2e-69
tr|A9RJS3|A9RJS3_PHYPA Predicted protein OS=Physcomitrella paten...   264   2e-69
tr|O64445|O64445_NICSY Light harvesting chlorophyll a/b-binding ...   263   3e-69
tr|A7Q0V3|A7Q0V3_VITVI Chromosome chr7 scaffold_42, whole genome...   263   4e-69
tr|Q765P5|Q765P5_PHYPA Light-harvesting chlorophyll a/b-binding ...   263   5e-69
tr|Q40961|Q40961_PRUPE Light-harvesting chlorophyll a/b-binding ...   262   7e-69
tr|A9RBQ3|A9RBQ3_PHYPA Predicted protein OS=Physcomitrella paten...   262   7e-69
tr|O64443|O64443_NICSY Light harvesting chlorophyll a/b-binding ...   262   9e-69
tr|B4FNR1|B4FNR1_MAIZE Chlorophyll a-b binding protein 2 OS=Zea ...   261   1e-68
tr|A9TL35|A9TL35_PHYPA Predicted protein OS=Physcomitrella paten...   261   1e-68
tr|A4F3R4|A4F3R4_SPIOL Major chlorophyll a/b binding protein LHC...   261   1e-68
tr|A4F3R3|A4F3R3_SPIOL Major chlorophyll a/b binding protein LHC...   261   1e-68
tr|O04686|O04686_MESCR Chlorophyll a/b-binding protein OS=Mesemb...   261   2e-68
tr|Q765P6|Q765P6_PHYPA Light-harvesting chlorophyll a/b-binding ...   261   2e-68
tr|O64444|O64444_NICSY Light harvesting chlorophyll a/b-binding ...   261   2e-68
tr|B3WFZ6|B3WFZ6_SPIOL Major chlorophyll a/b binding protein LHC...   261   2e-68
tr|Q2XTE0|Q2XTE0_SOLTU Chlorophyll a-b binding protein 3C-like O...   260   3e-68
tr|Q41424|Q41424_SOLTU Chlorophyll a/b binding protein OS=Solanu...   260   4e-68
tr|Q41421|Q41421_SOLTU Chlorophyll a/b binding protein OS=Solanu...   260   4e-68
tr|B8XLF1|B8XLF1_SOLNI Putative chloroplast chlorophyll a/b bind...   260   4e-68
tr|B6STN4|B6STN4_MAIZE Chlorophyll a-b binding protein 2 OS=Zea ...   260   4e-68
tr|A9RT62|A9RT62_PHYPA Predicted protein OS=Physcomitrella paten...   260   4e-68
tr|O64446|O64446_NICSY Light harvesting chlorophyll a/b-binding ...   259   5e-68
tr|O64442|O64442_NICSY Light harvesting chlorophyll a/b-binding ...   259   5e-68

>tr|A9RNP2|A9RNP2_PHYPA Predicted protein OS=Physcomitrella patens
           subsp. patens GN=PHYPADRAFT_176684 PE=4 SV=1
          Length = 265

 Score =  272 bits (695), Expect = 9e-72
 Identities = 134/157 (85%), Positives = 142/157 (90%)
 Frame = +2

Query: 59  GQAVYKPQSELSSKVVNVGEARVSMRKTVSKSSDSPWYGPDRVKYLGPFSGEAPSYLKGE 238
           GQ++ KP +ELS KV NV EAR+SMRKT SKSSDS WYG DR KYLGPFSGE PSYL GE
Sbjct: 14  GQSLLKPVNELSRKVGNV-EARISMRKTASKSSDSIWYGADRPKYLGPFSGETPSYLNGE 72

Query: 239 FPGDYGWDTAGLSADPETFAKNRELEVIHARWAMLGALGCVTPELLAKNGVKFGEAVWFK 418
           F GDYGWDTAGLS+DPETFA+NRELEVIHARWAMLGALGCVTPELLAKNGVKFGEAVWFK
Sbjct: 73  FAGDYGWDTAGLSSDPETFARNRELEVIHARWAMLGALGCVTPELLAKNGVKFGEAVWFK 132

Query: 419 AGSQIFAEGGLDYLGNPSLVHAQSILAIWACQVNLHG 529
           AG+QIF+EGGLDYLGNPSLVHAQSILAIWA QV L G
Sbjct: 133 AGAQIFSEGGLDYLGNPSLVHAQSILAIWASQVILMG 169


>tr|Q9SXW8|Q9SXW8_PHYPA Chlorophyll a/b-binding protein
           OS=Physcomitrella patens PE=2 SV=1
          Length = 268

 Score =  271 bits (693), Expect = 2e-71
 Identities = 135/159 (84%), Positives = 144/159 (90%), Gaps = 2/159 (1%)
 Frame = +2

Query: 59  GQAVYKPQSELSSKVVNVGEARVSMRKTVSKSS--DSPWYGPDRVKYLGPFSGEAPSYLK 232
           GQA+ KP SELS KV N GEARV+MRKTVSKSS  DS WYG DR K+LGPFSGE PSYL 
Sbjct: 15  GQALLKPVSELSRKV-NAGEARVTMRKTVSKSSGSDSIWYGADRPKFLGPFSGETPSYLN 73

Query: 233 GEFPGDYGWDTAGLSADPETFAKNRELEVIHARWAMLGALGCVTPELLAKNGVKFGEAVW 412
           GEF GDYGWDTAGLS+DPETFA+NRELEVIHARWAMLGALGC+TPELLAK+GVKFGEAVW
Sbjct: 74  GEFAGDYGWDTAGLSSDPETFARNRELEVIHARWAMLGALGCLTPELLAKSGVKFGEAVW 133

Query: 413 FKAGSQIFAEGGLDYLGNPSLVHAQSILAIWACQVNLHG 529
           FKAG+QIF+EGGLDYLGNPSLVHAQSILAIWACQV L G
Sbjct: 134 FKAGAQIFSEGGLDYLGNPSLVHAQSILAIWACQVILMG 172


>tr|A9T769|A9T769_PHYPA Predicted protein OS=Physcomitrella patens
           subsp. patens GN=PHYPADRAFT_219547 PE=4 SV=1
          Length = 268

 Score =  271 bits (693), Expect = 2e-71
 Identities = 135/159 (84%), Positives = 144/159 (90%), Gaps = 2/159 (1%)
 Frame = +2

Query: 59  GQAVYKPQSELSSKVVNVGEARVSMRKTVSKSS--DSPWYGPDRVKYLGPFSGEAPSYLK 232
           GQA+ KP SELS KV N GEARV+MRKTVSKSS  DS WYG DR K+LGPFSGE PSYL 
Sbjct: 15  GQALLKPVSELSRKV-NAGEARVTMRKTVSKSSGSDSIWYGADRPKFLGPFSGETPSYLN 73

Query: 233 GEFPGDYGWDTAGLSADPETFAKNRELEVIHARWAMLGALGCVTPELLAKNGVKFGEAVW 412
           GEF GDYGWDTAGLS+DPETFA+NRELEVIHARWAMLGALGC+TPELLAK+GVKFGEAVW
Sbjct: 74  GEFAGDYGWDTAGLSSDPETFARNRELEVIHARWAMLGALGCLTPELLAKSGVKFGEAVW 133

Query: 413 FKAGSQIFAEGGLDYLGNPSLVHAQSILAIWACQVNLHG 529
           FKAG+QIF+EGGLDYLGNPSLVHAQSILAIWACQV L G
Sbjct: 134 FKAGAQIFSEGGLDYLGNPSLVHAQSILAIWACQVILMG 172


>tr|Q39768|Q39768_GINBI Light-harvesting chlorophyll a/b binding
           protein of photosystem II OS=Ginkgo biloba PE=2 SV=1
          Length = 270

 Score =  269 bits (687), Expect = 8e-71
 Identities = 132/161 (81%), Positives = 141/161 (87%), Gaps = 4/161 (2%)
 Frame = +2

Query: 59  GQAVYKPQSELSSKVVNVGEARVSMRKTVSK----SSDSPWYGPDRVKYLGPFSGEAPSY 226
           GQ V KPQ+E    V   GE R++MRKT SK    SS SPWYGPDRVKYLGPFSGEAPSY
Sbjct: 16  GQIVLKPQNEFVGGVH--GEGRITMRKTASKKVVASSGSPWYGPDRVKYLGPFSGEAPSY 73

Query: 227 LKGEFPGDYGWDTAGLSADPETFAKNRELEVIHARWAMLGALGCVTPELLAKNGVKFGEA 406
           L GEFPGDYGWDTAGLSADPETFAKNRELEVIH+RWAMLGALGCV PELL++NGVKFGEA
Sbjct: 74  LTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSRNGVKFGEA 133

Query: 407 VWFKAGSQIFAEGGLDYLGNPSLVHAQSILAIWACQVNLHG 529
           VWFKAGSQIF++GGLDYLGNPSL+HAQSILAIWACQV L G
Sbjct: 134 VWFKAGSQIFSDGGLDYLGNPSLIHAQSILAIWACQVILMG 174


>tr|A9RAS2|A9RAS2_PHYPA Predicted protein OS=Physcomitrella patens
           subsp. patens GN=PHYPADRAFT_155384 PE=4 SV=1
          Length = 267

 Score =  266 bits (680), Expect = 5e-70
 Identities = 133/159 (83%), Positives = 143/159 (89%), Gaps = 2/159 (1%)
 Frame = +2

Query: 59  GQAVYKPQSELSSKVVNVGEARVSMRKTVSKS--SDSPWYGPDRVKYLGPFSGEAPSYLK 232
           GQ V KP +ELS KV NV EARV+MR+TVSKS  SDS WYG DR K+LGPFSGE PSYL 
Sbjct: 14  GQGVLKPVNELSRKVGNV-EARVTMRRTVSKSAGSDSIWYGADRPKFLGPFSGETPSYLT 72

Query: 233 GEFPGDYGWDTAGLSADPETFAKNRELEVIHARWAMLGALGCVTPELLAKNGVKFGEAVW 412
           GEF GDYGWDTAGLS+DPETFA+NRELEVIHARWAMLGALGC+TPELLAK+GVKFGEAVW
Sbjct: 73  GEFAGDYGWDTAGLSSDPETFARNRELEVIHARWAMLGALGCLTPELLAKSGVKFGEAVW 132

Query: 413 FKAGSQIFAEGGLDYLGNPSLVHAQSILAIWACQVNLHG 529
           FKAG+QIF+EGGLDYLGNPSLVHAQSILAIWACQV L G
Sbjct: 133 FKAGAQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMG 171


>tr|A9S6F4|A9S6F4_PHYPA Predicted protein OS=Physcomitrella patens
           subsp. patens GN=PHYPADRAFT_124625 PE=4 SV=1
          Length = 267

 Score =  266 bits (679), Expect = 6e-70
 Identities = 132/159 (83%), Positives = 144/159 (90%), Gaps = 2/159 (1%)
 Frame = +2

Query: 59  GQAVYKPQSELSSKVVNVGEARVSMRKTVSKS--SDSPWYGPDRVKYLGPFSGEAPSYLK 232
           GQ++ KP +ELS KV NV EARV+MR+TVSKS  SDS WYG DR K+LGPFSGE PSYL 
Sbjct: 14  GQSLVKPVNELSRKVGNV-EARVTMRRTVSKSAGSDSIWYGADRPKFLGPFSGETPSYLN 72

Query: 233 GEFPGDYGWDTAGLSADPETFAKNRELEVIHARWAMLGALGCVTPELLAKNGVKFGEAVW 412
           GEF GDYGWDTAGLS+DPETFA+NRELEVIHARWAMLGALGC+TPELLAK+GVKFGEAVW
Sbjct: 73  GEFAGDYGWDTAGLSSDPETFARNRELEVIHARWAMLGALGCLTPELLAKSGVKFGEAVW 132

Query: 413 FKAGSQIFAEGGLDYLGNPSLVHAQSILAIWACQVNLHG 529
           FKAG+QIF+EGGLDYLGNPSLVHAQSILAIWACQV L G
Sbjct: 133 FKAGAQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMG 171


>tr|O04687|O04687_MESCR Chlorophyll a/b-binding protein
           OS=Mesembryanthemum crystallinum GN=CAB3 PE=2 SV=1
          Length = 267

 Score =  264 bits (674), Expect = 2e-69
 Identities = 126/144 (87%), Positives = 132/144 (91%), Gaps = 4/144 (2%)
 Frame = +2

Query: 110 VGEARVSMRKTVSK----SSDSPWYGPDRVKYLGPFSGEAPSYLKGEFPGDYGWDTAGLS 277
           +GE R++MRKT  K    SSDSPWYGPDRVKYLGPFSGEAPSYL GEFPGDYGWDTAGLS
Sbjct: 28  LGEGRITMRKTAGKTKNVSSDSPWYGPDRVKYLGPFSGEAPSYLTGEFPGDYGWDTAGLS 87

Query: 278 ADPETFAKNRELEVIHARWAMLGALGCVTPELLAKNGVKFGEAVWFKAGSQIFAEGGLDY 457
           ADPETFAKNRELEVIH RWAMLGALGCV PELLA+NGVKFGEAVWFKAG+QIF+EGGLDY
Sbjct: 88  ADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDY 147

Query: 458 LGNPSLVHAQSILAIWACQVNLHG 529
           LGNPSLVHAQSILAIWACQV L G
Sbjct: 148 LGNPSLVHAQSILAIWACQVILMG 171


>tr|A9RJS3|A9RJS3_PHYPA Predicted protein OS=Physcomitrella patens
           subsp. patens GN=PHYPADRAFT_175594 PE=4 SV=1
          Length = 267

 Score =  264 bits (674), Expect = 2e-69
 Identities = 133/159 (83%), Positives = 142/159 (89%), Gaps = 2/159 (1%)
 Frame = +2

Query: 59  GQAVYKPQSELSSKVVNVGEARVSMRKTVSKS--SDSPWYGPDRVKYLGPFSGEAPSYLK 232
           GQ++ KP +ELS KV NV EARVSMRK+ SKS  SDS WYG DR KYLGPFSGE PSYL 
Sbjct: 14  GQSLLKPVNELSRKVGNV-EARVSMRKSASKSAASDSIWYGADRPKYLGPFSGETPSYLN 72

Query: 233 GEFPGDYGWDTAGLSADPETFAKNRELEVIHARWAMLGALGCVTPELLAKNGVKFGEAVW 412
           GEF GDYGWDTAGLS+DPETFA+NRELEVIHARWAMLGALGCVTPELLAK+GVKFGEAVW
Sbjct: 73  GEFAGDYGWDTAGLSSDPETFARNRELEVIHARWAMLGALGCVTPELLAKSGVKFGEAVW 132

Query: 413 FKAGSQIFAEGGLDYLGNPSLVHAQSILAIWACQVNLHG 529
           FKAG+QIF+EGGLDYLGNPSLVHAQSILAIWA QV L G
Sbjct: 133 FKAGAQIFSEGGLDYLGNPSLVHAQSILAIWASQVILMG 171


>tr|O64445|O64445_NICSY Light harvesting chlorophyll a/b-binding
           protein OS=Nicotiana sylvestris GN=Lhcb1*4 PE=3 SV=1
          Length = 265

 Score =  263 bits (673), Expect = 3e-69
 Identities = 127/141 (90%), Positives = 131/141 (92%), Gaps = 2/141 (1%)
 Frame = +2

Query: 113 GEARVSMRKTVSK--SSDSPWYGPDRVKYLGPFSGEAPSYLKGEFPGDYGWDTAGLSADP 286
           G  RVSMRKTV+K  +S SPWYGPDRVKYLGPFSGEAPSYL GEFPGDYGWDTAGLSADP
Sbjct: 29  GNGRVSMRKTVAKPVASSSPWYGPDRVKYLGPFSGEAPSYLTGEFPGDYGWDTAGLSADP 88

Query: 287 ETFAKNRELEVIHARWAMLGALGCVTPELLAKNGVKFGEAVWFKAGSQIFAEGGLDYLGN 466
           ETFAKNRELEVIH RWAMLGALGCV PELLA+NGVKFGEAVWFKAGSQIF+EGGLDYLGN
Sbjct: 89  ETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGN 148

Query: 467 PSLVHAQSILAIWACQVNLHG 529
           PSLVHAQSILAIWACQV L G
Sbjct: 149 PSLVHAQSILAIWACQVILMG 169


>tr|A7Q0V3|A7Q0V3_VITVI Chromosome chr7 scaffold_42, whole genome
           shotgun sequence OS=Vitis vinifera GN=GSVIVT00028191001
           PE=4 SV=1
          Length = 263

 Score =  263 bits (672), Expect = 4e-69
 Identities = 126/151 (83%), Positives = 135/151 (89%)
 Frame = +2

Query: 77  PQSELSSKVVNVGEARVSMRKTVSKSSDSPWYGPDRVKYLGPFSGEAPSYLKGEFPGDYG 256
           P +E SSKV   G+ R+SMRK+ +K S SPWYGPDRVKYLGPFSGE PSYL GEFPGDYG
Sbjct: 19  PGTEFSSKVR--GDGRISMRKSFAKPSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYG 76

Query: 257 WDTAGLSADPETFAKNRELEVIHARWAMLGALGCVTPELLAKNGVKFGEAVWFKAGSQIF 436
           WDTAGLSADPETFAKNRELEVIH RWAMLGALGCV PELL++NGVKFGEAVWFKAG+QIF
Sbjct: 77  WDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGAQIF 136

Query: 437 AEGGLDYLGNPSLVHAQSILAIWACQVNLHG 529
           +EGGLDYLGNP LVHAQSILAIWACQV L G
Sbjct: 137 SEGGLDYLGNPGLVHAQSILAIWACQVILMG 167