NBDC - アーカイブトップ - ヘルプ
データベースの説明 | データ項目の説明 | ダウンロード | 利用許諾 | ヘルプ
AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
NBDC - LSDB Archive
Description of this DB | Description of data items | Download | License
AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
DK955301
Clone id TST39A01NGRL0022_L18
Library
Length 156
Definition Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0022_L18. 5' end sequence.
Accession
Tissue type prothallia with plantlets
Developmental stage gametophytes with sporophytes
Contig ID -
Sequence 
GTACATGCCCCTGATTGACCACGAGGCTGTAATGCTGTTTTGGGTGATGCTCTGGTTATC
ATCGGTGCCACGTTGTATGCTCTTACTAATGTTTCTGACGAGATTCCGATCAAAAGAGTT
GATTTTGTGGAGCTGATGACATTTTTGGGCTTGTTT
■■Homology search results ■■ -
sp_hit_id Q8IXU6
Definition sp|Q8IXU6|S35F2_HUMAN Solute carrier family 35 member F2 OS=Homo sapiens
Align length 44
Score (bit) 43.5
E-value 0.0003
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK955301|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0022_L18, 5'
         (156 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q8IXU6|S35F2_HUMAN Solute carrier family 35 member F2 OS=Homo...    44   3e-04
sp|Q7TML3|S35F2_MOUSE Solute carrier family 35 member F2 OS=Mus ...    43   4e-04
sp|Q5T1Q4|S35F1_HUMAN Solute carrier family 35 member F1 OS=Homo...    41   0.002
sp|Q8BGK5|S35F1_MOUSE Solute carrier family 35 member F1 OS=Mus ...    41   0.002
sp|Q0V9U2|S35F2_XENTR Solute carrier family 35 member F2 OS=Xeno...    40   0.004

>sp|Q8IXU6|S35F2_HUMAN Solute carrier family 35 member F2 OS=Homo
           sapiens GN=SLC35F2 PE=1 SV=1
          Length = 374

 Score = 43.5 bits (101), Expect = 3e-04
 Identities = 18/44 (40%), Positives = 32/44 (72%)
 Frame = +1

Query: 25  GCNAVLGDALVIIGATLYALTNVSDEIPIKRVDFVELMTFLGLF 156
           G + ++GD LV++GA+LYA++NV +E  +K++   E +  +GLF
Sbjct: 192 GSDVLIGDILVLLGASLYAISNVCEEYIVKKLSRQEFLGMVGLF 235


>sp|Q7TML3|S35F2_MOUSE Solute carrier family 35 member F2 OS=Mus
           musculus GN=Slc35f2 PE=2 SV=2
          Length = 375

 Score = 43.1 bits (100), Expect = 4e-04
 Identities = 18/44 (40%), Positives = 32/44 (72%)
 Frame = +1

Query: 25  GCNAVLGDALVIIGATLYALTNVSDEIPIKRVDFVELMTFLGLF 156
           G + ++GD LV++GA+LYA++NV +E  +K++   E +  +GLF
Sbjct: 192 GSDVLIGDILVLLGASLYAVSNVCEEYIVKKLSRQEFLGMVGLF 235


>sp|Q5T1Q4|S35F1_HUMAN Solute carrier family 35 member F1 OS=Homo
           sapiens GN=SLC35F1 PE=2 SV=2
          Length = 408

 Score = 41.2 bits (95), Expect = 0.002
 Identities = 20/44 (45%), Positives = 30/44 (68%)
 Frame = +1

Query: 25  GCNAVLGDALVIIGATLYALTNVSDEIPIKRVDFVELMTFLGLF 156
           G N ++GD LV+ GATLY ++NV +E  I+ +  VE +  +GLF
Sbjct: 213 GENKLVGDLLVLGGATLYGISNVWEEYIIRTLSRVEFLGMIGLF 256


>sp|Q8BGK5|S35F1_MOUSE Solute carrier family 35 member F1 OS=Mus
           musculus GN=Slc35f1 PE=2 SV=1
          Length = 408

 Score = 40.8 bits (94), Expect = 0.002
 Identities = 20/44 (45%), Positives = 30/44 (68%)
 Frame = +1

Query: 25  GCNAVLGDALVIIGATLYALTNVSDEIPIKRVDFVELMTFLGLF 156
           G N ++GD LV+ GATLY ++NV +E  I+ +  VE +  +GLF
Sbjct: 213 GENKLVGDLLVLGGATLYGISNVWEESIIRTLSRVEFLGMIGLF 256


>sp|Q0V9U2|S35F2_XENTR Solute carrier family 35 member F2 OS=Xenopus
           tropicalis GN=slc35f2 PE=2 SV=2
          Length = 391

 Score = 40.0 bits (92), Expect = 0.004
 Identities = 18/44 (40%), Positives = 30/44 (68%)
 Frame = +1

Query: 25  GCNAVLGDALVIIGATLYALTNVSDEIPIKRVDFVELMTFLGLF 156
           G + ++GD LV+ GATLY +++V  E  ++ +  VEL+  +GLF
Sbjct: 196 GDSKLIGDVLVLGGATLYGISSVCQEYIVRNLSRVELLGMIGLF 239
tr_hit_id Q9LX40
Definition tr|Q9LX40|Q9LX40_ARATH Putative uncharacterized protein F25L23_170 OS=Arabidopsis thaliana
Align length 52
Score (bit) 61.2
E-value 2.0e-08
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK955301|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0022_L18, 5'
         (156 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|Q9LX40|Q9LX40_ARATH Putative uncharacterized protein F25L23_1...    61   2e-08
tr|Q948Q9|Q948Q9_ARATH Anthocyanin-related membrane protein 1 (P...    61   2e-08
tr|Q3EAH6|Q3EAH6_ARATH Uncharacterized protein At3g59310.2 OS=Ar...    61   2e-08
tr|Q9LX39|Q9LX39_ARATH Putative uncharacterized protein F25L23_1...    61   3e-08
tr|Q948Q8|Q948Q8_ARATH Anthocyanin-related membrane protein 2 (A...    61   3e-08
tr|Q7XJ54|Q7XJ54_ARATH At3g59320 (Anthocyanin-related membrane p...    61   3e-08
tr|Q3EAH5|Q3EAH5_ARATH Uncharacterized protein At3g59320.2 OS=Ar...    61   3e-08
tr|Q9LX38|Q9LX38_ARATH Putative uncharacterized protein F25L23_1...    59   2e-07
tr|Q9LX37|Q9LX37_ARATH Putative uncharacterized protein F25L23_2...    59   2e-07
tr|Q94JZ9|Q94JZ9_ARATH Putative uncharacterized protein F25L23_2...    59   2e-07
tr|Q948Q7|Q948Q7_ARATH Anthocyanin-related membrane protein 3 OS...    59   2e-07
tr|Q6NKU8|Q6NKU8_ARATH At3g59330 OS=Arabidopsis thaliana PE=2 SV=1     59   2e-07
tr|Q0DJC9|Q0DJC9_ORYSJ Os05g0299500 protein (Fragment) OS=Oryza ...    56   8e-07
tr|B7EMH5|B7EMH5_ORYSJ cDNA clone:J033047A18, full insert sequen...    56   8e-07
tr|A3B2B2|A3B2B2_ORYSJ Putative uncharacterized protein OS=Oryza...    56   8e-07
tr|A2Y2W5|A2Y2W5_ORYSI Putative uncharacterized protein OS=Oryza...    56   8e-07
tr|B4FG06|B4FG06_MAIZE Putative uncharacterized protein OS=Zea m...    54   4e-06
tr|Q69U97|Q69U97_ORYSJ Os08g0540000 protein OS=Oryza sativa subs...    53   7e-06
tr|B8B3L2|B8B3L2_ORYSI Putative uncharacterized protein OS=Oryza...    53   7e-06
tr|A5AFN7|A5AFN7_VITVI Putative uncharacterized protein OS=Vitis...    53   7e-06
tr|A7QS51|A7QS51_VITVI Chromosome chr5 scaffold_156, whole genom...    51   3e-05
tr|Q69IN6|Q69IN6_ORYSJ Anthocyanin-related membrane protein 1 (A...    50   6e-05
tr|B6U001|B6U001_MAIZE Solute carrier family 35, member F1 OS=Ze...    50   6e-05
tr|B4FRX3|B4FRX3_MAIZE Putative uncharacterized protein OS=Zea m...    50   6e-05
tr|A2ZVM3|A2ZVM3_ORYSJ Putative uncharacterized protein OS=Oryza...    50   6e-05
tr|B8BFP0|B8BFP0_ORYSI Putative uncharacterized protein OS=Oryza...    50   7e-05
tr|A9SXD2|A9SXD2_PHYPA Predicted protein (Fragment) OS=Physcomit...    48   3e-04
tr|B3RY74|B3RY74_TRIAD Putative uncharacterized protein (Fragmen...    46   0.001
tr|A7PPG1|A7PPG1_VITVI Chromosome chr8 scaffold_23, whole genome...    45   0.001
tr|A7PPG2|A7PPG2_VITVI Chromosome chr8 scaffold_23, whole genome...    45   0.002

>tr|Q9LX40|Q9LX40_ARATH Putative uncharacterized protein F25L23_170
           OS=Arabidopsis thaliana GN=F25L23_170 PE=4 SV=1
          Length = 339

 Score = 61.2 bits (147), Expect = 2e-08
 Identities = 31/52 (59%), Positives = 36/52 (69%)
 Frame = +1

Query: 1   VHAPD*PRGCNAVLGDALVIIGATLYALTNVSDEIPIKRVDFVELMTFLGLF 156
           VHA D   G N V GD LV+ GATLYA++N S+E  +K  D VELMTFLG F
Sbjct: 150 VHAGDRAGGSNPVKGDFLVLAGATLYAVSNTSEEFLVKNADTVELMTFLGFF 201


>tr|Q948Q9|Q948Q9_ARATH Anthocyanin-related membrane protein 1
           (Putative uncharacterized protein At3g59310)
           OS=Arabidopsis thaliana GN=Anm1 PE=2 SV=1
          Length = 332

 Score = 61.2 bits (147), Expect = 2e-08
 Identities = 31/52 (59%), Positives = 36/52 (69%)
 Frame = +1

Query: 1   VHAPD*PRGCNAVLGDALVIIGATLYALTNVSDEIPIKRVDFVELMTFLGLF 156
           VHA D   G N V GD LV+ GATLYA++N S+E  +K  D VELMTFLG F
Sbjct: 150 VHAGDRAGGSNPVKGDFLVLAGATLYAVSNTSEEFLVKNADTVELMTFLGFF 201


>tr|Q3EAH6|Q3EAH6_ARATH Uncharacterized protein At3g59310.2
           OS=Arabidopsis thaliana GN=At3g59310 PE=4 SV=1
          Length = 363

 Score = 61.2 bits (147), Expect = 2e-08
 Identities = 31/52 (59%), Positives = 36/52 (69%)
 Frame = +1

Query: 1   VHAPD*PRGCNAVLGDALVIIGATLYALTNVSDEIPIKRVDFVELMTFLGLF 156
           VHA D   G N V GD LV+ GATLYA++N S+E  +K  D VELMTFLG F
Sbjct: 150 VHAGDRAGGSNPVKGDFLVLAGATLYAVSNTSEEFLVKNADTVELMTFLGFF 201


>tr|Q9LX39|Q9LX39_ARATH Putative uncharacterized protein F25L23_180
           OS=Arabidopsis thaliana GN=F25L23_180 PE=4 SV=1
          Length = 315

 Score = 60.8 bits (146), Expect = 3e-08
 Identities = 31/52 (59%), Positives = 36/52 (69%)
 Frame = +1

Query: 1   VHAPD*PRGCNAVLGDALVIIGATLYALTNVSDEIPIKRVDFVELMTFLGLF 156
           VHA D   G N V GD LVI GATLYA++NV++E  +K  D  ELM FLGLF
Sbjct: 128 VHAGDRAGGSNPVKGDFLVIAGATLYAVSNVTEEFLVKNADVTELMAFLGLF 179


>tr|Q948Q8|Q948Q8_ARATH Anthocyanin-related membrane protein 2
           (At3g59320) OS=Arabidopsis thaliana GN=Anm2 PE=2 SV=1
          Length = 339

 Score = 60.8 bits (146), Expect = 3e-08
 Identities = 31/52 (59%), Positives = 36/52 (69%)
 Frame = +1

Query: 1   VHAPD*PRGCNAVLGDALVIIGATLYALTNVSDEIPIKRVDFVELMTFLGLF 156
           VHA D   G N V GD LVI GATLYA++NV++E  +K  D  ELM FLGLF
Sbjct: 151 VHAGDRAGGSNPVKGDFLVIAGATLYAVSNVTEEFLVKNADVTELMAFLGLF 202


>tr|Q7XJ54|Q7XJ54_ARATH At3g59320 (Anthocyanin-related membrane
           protein 2) OS=Arabidopsis thaliana GN=At3g59320 PE=2
           SV=1
          Length = 339

 Score = 60.8 bits (146), Expect = 3e-08
 Identities = 31/52 (59%), Positives = 36/52 (69%)
 Frame = +1

Query: 1   VHAPD*PRGCNAVLGDALVIIGATLYALTNVSDEIPIKRVDFVELMTFLGLF 156
           VHA D   G N V GD LVI GATLYA++NV++E  +K  D  ELM FLGLF
Sbjct: 151 VHAGDRAGGSNPVKGDFLVIAGATLYAVSNVTEEFLVKNADVTELMAFLGLF 202


>tr|Q3EAH5|Q3EAH5_ARATH Uncharacterized protein At3g59320.2
           OS=Arabidopsis thaliana GN=At3g59320 PE=4 SV=1
          Length = 238

 Score = 60.8 bits (146), Expect = 3e-08
 Identities = 31/52 (59%), Positives = 36/52 (69%)
 Frame = +1

Query: 1   VHAPD*PRGCNAVLGDALVIIGATLYALTNVSDEIPIKRVDFVELMTFLGLF 156
           VHA D   G N V GD LVI GATLYA++NV++E  +K  D  ELM FLGLF
Sbjct: 50  VHAGDRAGGSNPVKGDFLVIAGATLYAVSNVTEEFLVKNADVTELMAFLGLF 101


>tr|Q9LX38|Q9LX38_ARATH Putative uncharacterized protein F25L23_190
           OS=Arabidopsis thaliana GN=F25L23_190 PE=4 SV=1
          Length = 241

 Score = 58.5 bits (140), Expect = 2e-07
 Identities = 30/52 (57%), Positives = 36/52 (69%)
 Frame = +1

Query: 1   VHAPD*PRGCNAVLGDALVIIGATLYALTNVSDEIPIKRVDFVELMTFLGLF 156
           VHA D   G N + GD LVI GATLYA++NVS E  +K  D V+LM+ LGLF
Sbjct: 161 VHAGDRAGGSNPIKGDFLVIAGATLYAVSNVSQEFLVKNADRVQLMSLLGLF 212


>tr|Q9LX37|Q9LX37_ARATH Putative uncharacterized protein F25L23_200
           OS=Arabidopsis thaliana GN=F25L23_200 PE=4 SV=1
          Length = 330

 Score = 58.5 bits (140), Expect = 2e-07
 Identities = 29/52 (55%), Positives = 36/52 (69%)
 Frame = +1

Query: 1   VHAPD*PRGCNAVLGDALVIIGATLYALTNVSDEIPIKRVDFVELMTFLGLF 156
           VHA     G N V GD LV+ GATLYA++N ++E  +K  D VELMTF+GLF
Sbjct: 153 VHAGSRAGGSNPVKGDFLVLAGATLYAVSNTTEEFLVKNADTVELMTFMGLF 204


>tr|Q94JZ9|Q94JZ9_ARATH Putative uncharacterized protein F25L23_200
           (Putative uncharacterized protein At3g59340; F25L23_200)
           OS=Arabidopsis thaliana GN=F25L23_200 PE=2 SV=1
          Length = 333

 Score = 58.5 bits (140), Expect = 2e-07
 Identities = 29/52 (55%), Positives = 36/52 (69%)
 Frame = +1

Query: 1   VHAPD*PRGCNAVLGDALVIIGATLYALTNVSDEIPIKRVDFVELMTFLGLF 156
           VHA     G N V GD LV+ GATLYA++N ++E  +K  D VELMTF+GLF
Sbjct: 153 VHAGSRAGGSNPVKGDFLVLAGATLYAVSNTTEEFLVKNADTVELMTFMGLF 204