DK955328 |
Clone id |
TST39A01NGRL0022_M23 |
Library |
TST39 |
Length |
585 |
Definition |
Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0022_M23. 5' end sequence. |
Accession |
DK955328 |
Tissue type |
prothallia with plantlets |
Developmental stage |
gametophytes with sporophytes |
Contig ID |
CL3161Contig1 |
Sequence |
GAGAGAGAGAGAGAGAACGACAGAGATGGACGAGCTGCTCCACAGAGCGACCAAGAGCGA TGGCGGCATACCCAAAACCAAAATTGTGTGCACCCTTGGCCCAAAGTCGCGTGATGTGGG TATTATCGAGCGTCTTTTGCGCGCCGGGATGAACATCGCCCGCTTCAACTTTTCCCATGG CTCGCACGAGTACCACCAGGAAACTCTCGACAATCTACACATAGCCCAGCAAAACACTCA AATCATGTGCGCTGTCATGCTTGACACAAAGGGCCCTGAGATACGAACTGGCTTTTTGGA GGAGGGTAAGCCAATCCAGCTTGTAGAGGGGCAAGAATTGGTCATTTCAACTGATTACAG CATCAAAGGGAACTCAAAGATGATTTCTATGAGCTACAAAAAATTACCCCAAGACTTGGA ACCTGGCAGCACTATTCTGTGTTCAGATGGAACCATTACATTGACGGTATTATCATGTGA CCCAGCCGCTGGCACAGTAATTGTAAGATGTGAGAATACAGCAGTGCTTGGGGAAAGAAA AAATGTGAACCTTCCTGGAGTTGTTGTAGATCTTCCCACTTTAAC |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
P22200 |
Definition |
sp|P22200|KPYC_SOLTU Pyruvate kinase, cytosolic isozyme OS=Solanum tuberosum |
Align length |
176 |
Score (bit) |
299.0 |
E-value |
6.0e-81 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK955328|Adiantum capillus-veneris mRNA, clone: TST39A01NGRL0022_M23, 5' (585 letters)
Database: uniprot_sprot.fasta 412,525 sequences; 148,809,765 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
sp|P22200|KPYC_SOLTU Pyruvate kinase, cytosolic isozyme OS=Solan... 299 6e-81 sp|Q42806|KPYC_SOYBN Pyruvate kinase, cytosolic isozyme OS=Glyci... 288 1e-77 sp|Q42954|KPYC_TOBAC Pyruvate kinase, cytosolic isozyme OS=Nicot... 264 3e-70 sp|O65595|KPYC_ARATH Probable pyruvate kinase, cytosolic isozyme... 263 4e-70 sp|O44006|KPYK_EIMTE Pyruvate kinase OS=Eimeria tenella GN=PYK P... 169 9e-42 sp|Q54RF5|KPYK_DICDI Pyruvate kinase OS=Dictyostelium discoideum... 151 3e-36 sp|P0AD61|KPYK1_ECOLI Pyruvate kinase I OS=Escherichia coli (str... 145 2e-34 sp|P0AD62|KPYK1_ECO57 Pyruvate kinase I OS=Escherichia coli O157... 145 2e-34 sp|Q02499|KPYK_BACST Pyruvate kinase OS=Bacillus stearothermophi... 143 5e-34 sp|P77983|KPYK1_SALTY Pyruvate kinase I OS=Salmonella typhimuriu... 143 7e-34 sp|Q8Z6K2|KPYK1_SALTI Pyruvate kinase I OS=Salmonella typhi GN=p... 143 7e-34 sp|P51182|KPYK_BACPY Pyruvate kinase OS=Bacillus psychrophilus G... 141 3e-33 sp|P80885|KPYK_BACSU Pyruvate kinase OS=Bacillus subtilis GN=pyk... 140 5e-33 sp|Q49YC7|KPYK_STAS1 Pyruvate kinase OS=Staphylococcus saprophyt... 138 2e-32 sp|Q4L739|KPYK_STAHJ Pyruvate kinase OS=Staphylococcus haemolyti... 137 3e-32 sp|Q7A0N4|KPYK_STAAW Pyruvate kinase OS=Staphylococcus aureus (s... 137 4e-32 sp|Q6G8M9|KPYK_STAAS Pyruvate kinase OS=Staphylococcus aureus (s... 137 4e-32 sp|Q6GG09|KPYK_STAAR Pyruvate kinase OS=Staphylococcus aureus (s... 137 4e-32 sp|Q7A559|KPYK_STAAN Pyruvate kinase OS=Staphylococcus aureus (s... 137 4e-32 sp|Q99TG5|KPYK_STAAM Pyruvate kinase OS=Staphylococcus aureus (s... 137 4e-32 sp|Q5HF76|KPYK_STAAC Pyruvate kinase OS=Staphylococcus aureus (s... 137 4e-32 sp|Q2YTE3|KPYK_STAAB Pyruvate kinase OS=Staphylococcus aureus (s... 137 4e-32 sp|Q2FXM9|KPYK_STAA8 Pyruvate kinase OS=Staphylococcus aureus (s... 137 4e-32 sp|Q2FG40|KPYK_STAA3 Pyruvate kinase OS=Staphylococcus aureus (s... 137 4e-32 sp|P30613|KPYR_HUMAN Pyruvate kinase isozymes R/L OS=Homo sapien... 135 2e-31 sp|Q8CS69|KPYK_STAES Pyruvate kinase OS=Staphylococcus epidermid... 133 6e-31 sp|Q5HNK7|KPYK_STAEQ Pyruvate kinase OS=Staphylococcus epidermid... 133 6e-31 sp|Q10208|KPYK_SCHPO Pyruvate kinase OS=Schizosaccharomyces pomb... 132 1e-30 sp|Q12669|KPYK_ASPNG Pyruvate kinase OS=Aspergillus niger GN=pki... 131 2e-30 sp|P12928|KPYR_RAT Pyruvate kinase isozymes R/L OS=Rattus norveg... 130 4e-30
>sp|P22200|KPYC_SOLTU Pyruvate kinase, cytosolic isozyme OS=Solanum tuberosum PE=2 SV=1 Length = 510
Score = 299 bits (766), Expect = 6e-81 Identities = 144/176 (81%), Positives = 160/176 (90%) Frame = +2
Query: 56 SDGGIPKTKIVCTLGPKSRDVGIIERLLRAGMNIARFNFSHGSHEYHQETLDNLHIAQQN 235 +DG IPKTKIVCTLGP SR V ++E+LLRAGMN+ARFNFSHG+HEYHQETLDNL IA QN Sbjct: 15 NDGRIPKTKIVCTLGPSSRTVPMLEKLLRAGMNVARFNFSHGTHEYHQETLDNLKIAMQN 74
Query: 236 TQIMCAVMLDTKGPEIRTGFLEEGKPIQLVEGQELVISTDYSIKGNSKMISMSYKKLPQD 415 TQI+CAVMLDTKGPEIRTGFL +GKPIQL EGQE+ +STDY+IKGN +MISMSYKKL D Sbjct: 75 TQILCAVMLDTKGPEIRTGFLTDGKPIQLKEGQEITVSTDYTIKGNEEMISMSYKKLVMD 134
Query: 416 LEPGSTILCSDGTITLTVLSCDPAAGTVIVRCENTAVLGERKNVNLPGVVVDLPTL 583 L+PG+TILC+DGTITLTVLSCDP +GTV RCENTA LGERKNVNLPGVVVDLPTL Sbjct: 135 LKPGNTILCADGTITLTVLSCDPPSGTVRCRCENTATLGERKNVNLPGVVVDLPTL 190
>sp|Q42806|KPYC_SOYBN Pyruvate kinase, cytosolic isozyme OS=Glycine max PE=2 SV=1 Length = 511
Score = 288 bits (737), Expect = 1e-77 Identities = 140/187 (74%), Positives = 161/187 (86%) Frame = +2
Query: 23 EMDELLHRATKSDGGIPKTKIVCTLGPKSRDVGIIERLLRAGMNIARFNFSHGSHEYHQE 202 +++ +L + DG +PKTKIVCTLGP SR V + E+LLRAGMN+ARFNFSHG+H+YHQE Sbjct: 5 DIEGILKQQQPYDGRVPKTKIVCTLGPASRSVEMTEKLLRAGMNVARFNFSHGTHDYHQE 64
Query: 203 TLDNLHIAQQNTQIMCAVMLDTKGPEIRTGFLEEGKPIQLVEGQELVISTDYSIKGNSKM 382 TL+NL A NT I+CAVMLDTKGPEIRTGFL++GKPIQL EGQE+ I+TDY IKG+ +M Sbjct: 65 TLNNLKTAMHNTGILCAVMLDTKGPEIRTGFLKDGKPIQLKEGQEVTITTDYDIKGDPEM 124
Query: 383 ISMSYKKLPQDLEPGSTILCSDGTITLTVLSCDPAAGTVIVRCENTAVLGERKNVNLPGV 562 ISMSYKKLP L+PG+TILCSDGTITLTVLSCDP AGTV RCENTA LGERKNVNLPGV Sbjct: 125 ISMSYKKLPVHLKPGNTILCSDGTITLTVLSCDPDAGTVRCRCENTATLGERKNVNLPGV 184
Query: 563 VVDLPTL 583 VVDLPTL Sbjct: 185 VVDLPTL 191
>sp|Q42954|KPYC_TOBAC Pyruvate kinase, cytosolic isozyme OS=Nicotiana tabacum PE=2 SV=1 Length = 508
Score = 264 bits (674), Expect = 3e-70 Identities = 127/171 (74%), Positives = 146/171 (85%) Frame = +2
Query: 71 PKTKIVCTLGPKSRDVGIIERLLRAGMNIARFNFSHGSHEYHQETLDNLHIAQQNTQIMC 250 PKTKIVCTLGP SR V +IE+LLRAGMN+ARFNFSHGSH+YHQET+DNL A ++T I+C Sbjct: 18 PKTKIVCTLGPASRSVPMIEKLLRAGMNVARFNFSHGSHDYHQETIDNLRQAMESTGILC 77
Query: 251 AVMLDTKGPEIRTGFLEEGKPIQLVEGQELVISTDYSIKGNSKMISMSYKKLPQDLEPGS 430 AVMLDTKGPEIRTGFL++ KP+QL +GQE+ ISTDYSIKG+ MI MSYKKL +D++P S Sbjct: 78 AVMLDTKGPEIRTGFLKDAKPVQLKQGQEITISTDYSIKGDESMICMSYKKLAEDVKPQS 137
Query: 431 TILCSDGTITLTVLSCDPAAGTVIVRCENTAVLGERKNVNLPGVVVDLPTL 583 ILC+DG IT TVLSCD G RCENTAVLGERKNVNLPGV+VDLPTL Sbjct: 138 VILCADGQITFTVLSCDKENGLDRCRCENTAVLGERKNVNLPGVIVDLPTL 188
>sp|O65595|KPYC_ARATH Probable pyruvate kinase, cytosolic isozyme OS=Arabidopsis thaliana GN=At4g26390 PE=2 SV=1 Length = 497
Score = 263 bits (673), Expect = 4e-70 Identities = 127/171 (74%), Positives = 146/171 (85%) Frame = +2
Query: 71 PKTKIVCTLGPKSRDVGIIERLLRAGMNIARFNFSHGSHEYHQETLDNLHIAQQNTQIMC 250 PKTKIVCTLGP SR V ++E+LL AGM++ARFNFSHGS+EYHQETLDNL A NT ++C Sbjct: 7 PKTKIVCTLGPASRSVPMVEKLLMAGMSVARFNFSHGSYEYHQETLDNLRQAMLNTGMLC 66
Query: 251 AVMLDTKGPEIRTGFLEEGKPIQLVEGQELVISTDYSIKGNSKMISMSYKKLPQDLEPGS 430 AVMLDTKGPEIRTGFL++GKPIQL +GQE+ ISTDY +KG+ K I MSYKKL QD+ PG Sbjct: 67 AVMLDTKGPEIRTGFLKDGKPIQLKQGQEITISTDYDLKGDEKTICMSYKKLAQDVNPGM 126
Query: 431 TILCSDGTITLTVLSCDPAAGTVIVRCENTAVLGERKNVNLPGVVVDLPTL 583 ILC+DGTI+L VLSCD GTV RCENT++LGERKNVNLPGVVVDLPTL Sbjct: 127 VILCADGTISLKVLSCDKEKGTVRCRCENTSMLGERKNVNLPGVVVDLPTL 177
>sp|O44006|KPYK_EIMTE Pyruvate kinase OS=Eimeria tenella GN=PYK PE=2 SV=1 Length = 531
Score = 169 bits (428), Expect = 9e-42 Identities = 89/187 (47%), Positives = 119/187 (63%), Gaps = 1/187 (0%) Frame = +2
Query: 26 MDELLHRATKSDGGIPKTKIVCTLGPKSRDVGIIERLLRAGMNIARFNFSHGSHEYHQET 205 M ++L D +TKIVCT+GP DV + +L+ AGMN+ R NFSHG HE H Sbjct: 41 MSQILEHHEDEDFSAHRTKIVCTMGPSCWDVDKMVQLIDAGMNVCRLNFSHGDHEAHGRV 100
Query: 206 LDNLHIA-QQNTQIMCAVMLDTKGPEIRTGFLEEGKPIQLVEGQELVISTDYSIKGNSKM 382 + NL A +Q A++LDTKGPEIRTG LE KPI+L G L I TDYS GN Sbjct: 101 VKNLQEALKQRPGKRVALLLDTKGPEIRTGMLEGDKPIELHAGDMLKIVTDYSFVGNKSC 160
Query: 383 ISMSYKKLPQDLEPGSTILCSDGTITLTVLSCDPAAGTVIVRCENTAVLGERKNVNLPGV 562 I+ SY+KLP ++PG+TIL +DG++++ V+ C V+ R N A++G +KN+NLPGV Sbjct: 161 IACSYEKLPSSVKPGNTILIADGSLSVEVVEC--GKDYVMTRVMNPAIIGNKKNMNLPGV 218
Query: 563 VVDLPTL 583 VDLP + Sbjct: 219 KVDLPVI 225
>sp|Q54RF5|KPYK_DICDI Pyruvate kinase OS=Dictyostelium discoideum GN=pyk PE=3 SV=1 Length = 507
Score = 151 bits (381), Expect = 3e-36 Identities = 74/171 (43%), Positives = 112/171 (65%), Gaps = 1/171 (0%) Frame = +2
Query: 74 KTKIVCTLGPKSRDVGIIERLLRAGMNIARFNFSHGSHEYHQETLDNLHIAQQNTQIMCA 253 +TKIVCT+GPK+ + +L+ GMN+ R NFSHG+H+YH + + N+ A + T + A Sbjct: 21 RTKIVCTIGPKTMSEEALIKLIETGMNVCRLNFSHGTHDYHGQVIKNVRSAMEKTGKIIA 80
Query: 254 VMLDTKGPEIRTGFLEEG-KPIQLVEGQELVISTDYSIKGNSKMISMSYKKLPQDLEPGS 430 +MLDTKGPEIRTG +E+ + L GQE+++ T+ + G S IS+ YK L ++ G Sbjct: 81 IMLDTKGPEIRTGKIEDRCGYVDLFVGQEILVDTNMNQPGTSFRISIDYKGLLDSVKVGG 140
Query: 431 TILCSDGTITLTVLSCDPAAGTVIVRCENTAVLGERKNVNLPGVVVDLPTL 583 IL +DG I+L++ + + G V+ R N + LGE KNV+LPG +V+LP + Sbjct: 141 YILIADGVISLSITAVEKEKGHVVCRVNNNSRLGENKNVHLPGAIVNLPAV 191
>sp|P0AD61|KPYK1_ECOLI Pyruvate kinase I OS=Escherichia coli (strain K12) GN=pykF PE=1 SV=1 Length = 470
Score = 145 bits (365), Expect = 2e-34 Identities = 75/170 (44%), Positives = 103/170 (60%) Frame = +2
Query: 74 KTKIVCTLGPKSRDVGIIERLLRAGMNIARFNFSHGSHEYHQETLDNLHIAQQNTQIMCA 253 KTKIVCT+GPK+ ++ ++L AGMN+ R NFSHG + H + + NL T A Sbjct: 3 KTKIVCTIGPKTESEEMLAKMLDAGMNVMRLNFSHGDYAEHGQRIQNLRNVMSKTGKTAA 62
Query: 254 VMLDTKGPEIRTGFLEEGKPIQLVEGQELVISTDYSIKGNSKMISMSYKKLPQDLEPGST 433 ++LDTKGPEIRT LE G + L GQ +TD S+ GNS+M++++Y+ DL G+T Sbjct: 63 ILLDTKGPEIRTMKLEGGNDVSLKAGQTFTFTTDKSVIGNSEMVAVTYEGFTTDLSVGNT 122
Query: 434 ILCSDGTITLTVLSCDPAAGTVIVRCENTAVLGERKNVNLPGVVVDLPTL 583 +L DG I + V + + VI + N LGE K VNLPGV + LP L Sbjct: 123 VLVDDGLIGMEVTAIE--GNKVICKVLNNGDLGENKGVNLPGVSIALPAL 170
>sp|P0AD62|KPYK1_ECO57 Pyruvate kinase I OS=Escherichia coli O157:H7 GN=pykF PE=3 SV=1 Length = 470
Score = 145 bits (365), Expect = 2e-34 Identities = 75/170 (44%), Positives = 103/170 (60%) Frame = +2
Query: 74 KTKIVCTLGPKSRDVGIIERLLRAGMNIARFNFSHGSHEYHQETLDNLHIAQQNTQIMCA 253 KTKIVCT+GPK+ ++ ++L AGMN+ R NFSHG + H + + NL T A Sbjct: 3 KTKIVCTIGPKTESEEMLAKMLDAGMNVMRLNFSHGDYAEHGQRIQNLRNVMSKTGKTAA 62
Query: 254 VMLDTKGPEIRTGFLEEGKPIQLVEGQELVISTDYSIKGNSKMISMSYKKLPQDLEPGST 433 ++LDTKGPEIRT LE G + L GQ +TD S+ GNS+M++++Y+ DL G+T Sbjct: 63 ILLDTKGPEIRTMKLEGGNDVSLKAGQTFTFTTDKSVIGNSEMVAVTYEGFTTDLSVGNT 122
Query: 434 ILCSDGTITLTVLSCDPAAGTVIVRCENTAVLGERKNVNLPGVVVDLPTL 583 +L DG I + V + + VI + N LGE K VNLPGV + LP L Sbjct: 123 VLVDDGLIGMEVTAIE--GNKVICKVLNNGDLGENKGVNLPGVSIALPAL 170
>sp|Q02499|KPYK_BACST Pyruvate kinase OS=Bacillus stearothermophilus GN=pyk PE=1 SV=2 Length = 587
Score = 143 bits (361), Expect = 5e-34 Identities = 79/168 (47%), Positives = 105/168 (62%) Frame = +2
Query: 74 KTKIVCTLGPKSRDVGIIERLLRAGMNIARFNFSHGSHEYHQETLDNLHIAQQNTQIMCA 253 KTKIVCT+GP S V + +L+ AGMN+AR NFSHG HE H + N+ A + T A Sbjct: 4 KTKIVCTIGPASESVDKLVQLMEAGMNVARLNFSHGDHEEHGRRIANIREAAKRTGRTVA 63
Query: 254 VMLDTKGPEIRTGFLEEGKPIQLVEGQELVISTDYSIKGNSKMISMSYKKLPQDLEPGST 433 ++LDTKGPEIRT +E G I+L EG +LVIS + G + IS++Y L D+ G+ Sbjct: 64 ILLDTKGPEIRTHNMENG-AIELKEGSKLVISMS-EVLGTPEKISVTYPSLIDDVSVGAK 121
Query: 434 ILCSDGTITLTVLSCDPAAGTVIVRCENTAVLGERKNVNLPGVVVDLP 577 IL DG I+L V + D AG ++ N VL +K VN+PGV V+LP Sbjct: 122 ILLDDGLISLEVNAVDKQAGEIVTTVLNGGVLKNKKGVNVPGVKVNLP 169
>sp|P77983|KPYK1_SALTY Pyruvate kinase I OS=Salmonella typhimurium GN=pykF PE=3 SV=2 Length = 470
Score = 143 bits (360), Expect = 7e-34 Identities = 73/170 (42%), Positives = 103/170 (60%) Frame = +2
Query: 74 KTKIVCTLGPKSRDVGIIERLLRAGMNIARFNFSHGSHEYHQETLDNLHIAQQNTQIMCA 253 KTKIVCT+GPK+ ++ ++L AGMN+ R NFSHG + H + + NL T A Sbjct: 3 KTKIVCTIGPKTESEEMLSKMLDAGMNVMRLNFSHGDYAEHGQRIQNLRNVMSKTGKKAA 62
Query: 254 VMLDTKGPEIRTGFLEEGKPIQLVEGQELVISTDYSIKGNSKMISMSYKKLPQDLEPGST 433 ++LDTKGPEIRT LE G + L GQ +TD S+ GN+++++++Y+ DL G+T Sbjct: 63 ILLDTKGPEIRTIKLEGGNDVSLKAGQTFTFTTDKSVVGNNEIVAVTYEGFTSDLSVGNT 122
Query: 434 ILCSDGTITLTVLSCDPAAGTVIVRCENTAVLGERKNVNLPGVVVDLPTL 583 +L DG I + V + + VI + N LGE K VNLPGV + LP L Sbjct: 123 VLVDDGLIGMEVTAIE--GNKVICKVLNNGDLGENKGVNLPGVSIALPAL 170
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A7QNP5 |
Definition |
tr|A7QNP5|A7QNP5_VITVI Pyruvate kinase OS=Vitis vinifera |
Align length |
176 |
Score (bit) |
302.0 |
E-value |
8.0e-81 |
Report |
|