DK955341 |
Clone id |
TST39A01NGRL0022_N12 |
Library |
TST39 |
Length |
593 |
Definition |
Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0022_N12. 5' end sequence. |
Accession |
DK955341 |
Tissue type |
prothallia with plantlets |
Developmental stage |
gametophytes with sporophytes |
Contig ID |
CL3Contig1 |
Sequence |
ATCTTGGCCATGGATGAGTCCAACGCAACATGTGGGAAGCGCCTTGCCTCAATCGGCCTT GAGAACACTGAAGCAAACCGACAGGCTTACCGACAGCTTCTTTGTACTGCACCTGGTCTT GGTGAATACATCTCTGGTGCAATTCTTTTTGAGGAGACTCTGTACCAATCGACCCTCGAT GGGAAGAAGTTTGTGGACTGCTTAAAGGAAGGTGGCATTGCCCCTGGAATTAAAGTGGAC AAGGGTTTGGTGCCTTTGGCTGGATCCAATGATGAGTCCTGGTGCCAGGGTCTTGATGGG TTGGCATCCAGGTCTGCTGAGTATTACAAGCAAGGTGCACGATTCGCCAAGTGGAGGACT GTTGTCAGCATTCCCAACGGGCCTTCGGAGCTGGCTGTGCAAGAGGCTGCATGGGGTTTG GCAAGATATGCTGCTATCTCACAGGACAATGGTTTGGTTCCTATTGTGGAGCCTGAAATC CTTCTTGATGGAGAGCATGGGATTGACAGGACGCTTGCTGTGGCCGAGAAAGTGTGGAAT GAGGTTTTCTACTTCTTGGCAAAGAACAATGTGATGTATGAGGGTATCCTCCT |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q40677 |
Definition |
sp|Q40677|ALFC_ORYSJ Fructose-bisphosphate aldolase, chloroplastic OS=Oryza sativa subsp. japonica |
Align length |
190 |
Score (bit) |
337.0 |
E-value |
3.0e-92 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK955341|Adiantum capillus-veneris mRNA, clone: TST39A01NGRL0022_N12, 5' (570 letters)
Database: uniprot_sprot.fasta 412,525 sequences; 148,809,765 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
sp|Q40677|ALFC_ORYSJ Fructose-bisphosphate aldolase, chloroplast... 337 3e-92 sp|Q9ZU52|ALFC3_ARATH Probable fructose-bisphosphate aldolase 3,... 333 4e-91 sp|Q01516|ALFC1_PEA Fructose-bisphosphate aldolase 1, chloroplas... 332 6e-91 sp|Q01517|ALFC2_PEA Fructose-bisphosphate aldolase 2, chloroplas... 331 2e-90 sp|Q9SJU4|ALFC1_ARATH Probable fructose-bisphosphate aldolase 1,... 329 5e-90 sp|P16096|ALFC_SPIOL Fructose-bisphosphate aldolase, chloroplast... 323 5e-88 sp|Q944G9|ALFC2_ARATH Probable fructose-bisphosphate aldolase 2,... 318 2e-86 sp|Q42690|ALFC_CHLRE Fructose-bisphosphate aldolase 1, chloropla... 263 5e-70 sp|P29356|ALF_SPIOL Fructose-bisphosphate aldolase, cytoplasmic ... 224 2e-58 sp|P08440|ALF_MAIZE Fructose-bisphosphate aldolase, cytoplasmic ... 216 5e-56 sp|P17784|ALF_ORYSJ Fructose-bisphosphate aldolase cytoplasmic i... 215 1e-55 sp|O65735|ALF_CICAR Fructose-bisphosphate aldolase, cytoplasmic ... 213 7e-55 sp|P46256|ALF1_PEA Fructose-bisphosphate aldolase, cytoplasmic i... 211 2e-54 sp|P46257|ALF2_PEA Fructose-bisphosphate aldolase, cytoplasmic i... 211 2e-54 sp|P22197|ALF_ARATH Fructose-bisphosphate aldolase, cytoplasmic ... 210 4e-54 sp|Q9GP32|ALF_ECHMU Fructose-bisphosphate aldolase OS=Echinococc... 201 3e-51 sp|Q86A67|ALF_DICDI Fructose-bisphosphate aldolase OS=Dictyostel... 198 1e-50 sp|P49577|ALF2_PLABA Fructose-bisphosphate aldolase 2 OS=Plasmod... 196 7e-50 sp|P14223|ALF_PLAFA Fructose-bisphosphate aldolase OS=Plasmodium... 195 2e-49 sp|Q7KQL9|ALF_PLAF7 Fructose-bisphosphate aldolase OS=Plasmodium... 195 2e-49 sp|P53445|ALF1_LAMJA Fructose-bisphosphate aldolase, muscle type... 194 3e-49 sp|P46563|ALF2_CAEEL Fructose-bisphosphate aldolase 2 OS=Caenorh... 193 4e-49 sp|Q8P5Z7|ALF1_XANCP Probable fructose-bisphosphate aldolase cla... 193 6e-49 sp|Q8JH70|ALDOC_DANRE Fructose-bisphosphate aldolase C OS=Danio ... 192 1e-48 sp|P53442|ALF_SCHMA Fructose-bisphosphate aldolase OS=Schistosom... 191 2e-48 sp|Q8PHB5|ALF1_XANAC Probable fructose-bisphosphate aldolase cla... 191 2e-48 sp|Q87AI0|ALF1_XYLFT Probable fructose-bisphosphate aldolase cla... 191 2e-48 sp|Q9PF52|ALF1_XYLFA Probable fructose-bisphosphate aldolase cla... 190 5e-48 sp|P53446|ALF2_LAMJA Fructose-bisphosphate aldolase, non-muscle ... 189 6e-48 sp|P53448|ALDOC_CARAU Fructose-bisphosphate aldolase C OS=Carass... 189 6e-48
>sp|Q40677|ALFC_ORYSJ Fructose-bisphosphate aldolase, chloroplastic OS=Oryza sativa subsp. japonica GN=Os11g0171300 PE=1 SV=2 Length = 388
Score = 337 bits (863), Expect = 3e-92 Identities = 166/190 (87%), Positives = 176/190 (92%) Frame = +1
Query: 1 ILAMDESNATCGKRLASIGLENTEANRQAYRQLLCTAPGLGEYISGAILFEETLYQSTLD 180 ILAMDESNATCGKRLASIGLENTEANRQAYR LL TAPGLG+YISGAILFEETLYQST+D Sbjct: 59 ILAMDESNATCGKRLASIGLENTEANRQAYRTLLVTAPGLGQYISGAILFEETLYQSTVD 118
Query: 181 GKKFVDCLKEGGIAPGIKVDKGLVPLAGSNDESWCQGLDGLASRSAEYYKQGARFAKWRT 360 GKK VD L E I PGIKVDKGLVPLAGSN+ESWCQGLDGLASR A YY+QGARFAKWRT Sbjct: 119 GKKIVDILTEQKIVPGIKVDKGLVPLAGSNNESWCQGLDGLASREAAYYQQGARFAKWRT 178
Query: 361 VVSIPNGPSELAVQEAAWGLARYAAISQDNGLVPIVEPEILLDGEHGIDRTLAVAEKVWN 540 VVSIPNGPSELAV+EAAWGLARYAAISQDNGLVPIVEPEILLDGEHGIDRT VA+KVW Sbjct: 179 VVSIPNGPSELAVKEAAWGLARYAAISQDNGLVPIVEPEILLDGEHGIDRTFEVAQKVWA 238
Query: 541 EVFYFLAKNN 570 E F+++A+NN Sbjct: 239 ETFFYMAENN 248
>sp|Q9ZU52|ALFC3_ARATH Probable fructose-bisphosphate aldolase 3, chloroplastic OS=Arabidopsis thaliana GN=FBA3 PE=1 SV=1 Length = 391
Score = 333 bits (854), Expect = 4e-91 Identities = 162/190 (85%), Positives = 177/190 (93%) Frame = +1
Query: 1 ILAMDESNATCGKRLASIGLENTEANRQAYRQLLCTAPGLGEYISGAILFEETLYQSTLD 180 ILA+DESNATCGKRLASIGL+NTE NRQAYRQLL T PGLG+YISG+ILFEETLYQST D Sbjct: 62 ILAIDESNATCGKRLASIGLDNTEDNRQAYRQLLLTTPGLGDYISGSILFEETLYQSTKD 121
Query: 181 GKKFVDCLKEGGIAPGIKVDKGLVPLAGSNDESWCQGLDGLASRSAEYYKQGARFAKWRT 360 GK FVDCL++ I PGIKVDKGL PLAGSN+ESWCQGLDGLASRSAEYYKQGARFAKWRT Sbjct: 122 GKTFVDCLRDANIVPGIKVDKGLSPLAGSNEESWCQGLDGLASRSAEYYKQGARFAKWRT 181
Query: 361 VVSIPNGPSELAVQEAAWGLARYAAISQDNGLVPIVEPEILLDGEHGIDRTLAVAEKVWN 540 VVS+P GPS LAV+EAAWGLARYAAISQDNGLVPIVEPEILLDG+H I+RTL VAEKVW+ Sbjct: 182 VVSVPCGPSALAVKEAAWGLARYAAISQDNGLVPIVEPEILLDGDHPIERTLEVAEKVWS 241
Query: 541 EVFYFLAKNN 570 EVF++LA+NN Sbjct: 242 EVFFYLAQNN 251
>sp|Q01516|ALFC1_PEA Fructose-bisphosphate aldolase 1, chloroplastic (Fragment) OS=Pisum sativum PE=1 SV=1 Length = 356
Score = 332 bits (852), Expect = 6e-91 Identities = 166/190 (87%), Positives = 173/190 (91%) Frame = +1
Query: 1 ILAMDESNATCGKRLASIGLENTEANRQAYRQLLCTAPGLGEYISGAILFEETLYQSTLD 180 ILAMDESNATCGKRLASIGLENTE NRQA+R LL T P LGEYISGAILFEETLYQST D Sbjct: 27 ILAMDESNATCGKRLASIGLENTEVNRQAWRTLLVTVPTLGEYISGAILFEETLYQSTTD 86
Query: 181 GKKFVDCLKEGGIAPGIKVDKGLVPLAGSNDESWCQGLDGLASRSAEYYKQGARFAKWRT 360 G+K VD L E I PGIKVDKGLVPLAGSNDESWCQGLDGLASRSA YY+QGARFAKWRT Sbjct: 87 GRKIVDVLIEQNIIPGIKVDKGLVPLAGSNDESWCQGLDGLASRSAAYYQQGARFAKWRT 146
Query: 361 VVSIPNGPSELAVQEAAWGLARYAAISQDNGLVPIVEPEILLDGEHGIDRTLAVAEKVWN 540 VVSIPNGPS LAV+EAAWGLARYAAISQDNGLVPIVEPEILLDGEHGIDRT VA+KVW Sbjct: 147 VVSIPNGPSALAVKEAAWGLARYAAISQDNGLVPIVEPEILLDGEHGIDRTFEVAQKVWA 206
Query: 541 EVFYFLAKNN 570 EVFY+LA+NN Sbjct: 207 EVFYYLAENN 216
>sp|Q01517|ALFC2_PEA Fructose-bisphosphate aldolase 2, chloroplastic OS=Pisum sativum PE=1 SV=2 Length = 349
Score = 331 bits (848), Expect = 2e-90 Identities = 165/190 (86%), Positives = 174/190 (91%) Frame = +1
Query: 1 ILAMDESNATCGKRLASIGLENTEANRQAYRQLLCTAPGLGEYISGAILFEETLYQSTLD 180 ILAMDESNATCGKRL SIGLENTEANRQA+R LL T P LGEYISGAILFEETLYQST+D Sbjct: 21 ILAMDESNATCGKRLDSIGLENTEANRQAWRTLLVTVPTLGEYISGAILFEETLYQSTVD 80
Query: 181 GKKFVDCLKEGGIAPGIKVDKGLVPLAGSNDESWCQGLDGLASRSAEYYKQGARFAKWRT 360 G+K VD L E I PGIKVDKGLVPLAGSN+ESWCQGLDGLASRSA YY+QGARFAKWRT Sbjct: 81 GRKIVDVLVEQNIIPGIKVDKGLVPLAGSNNESWCQGLDGLASRSAAYYQQGARFAKWRT 140
Query: 361 VVSIPNGPSELAVQEAAWGLARYAAISQDNGLVPIVEPEILLDGEHGIDRTLAVAEKVWN 540 VVSIPNGPS LAV+EAAWGLARYAAISQDNGLVPIVEPEILLDGEHGIDRT VA+KVW Sbjct: 141 VVSIPNGPSALAVKEAAWGLARYAAISQDNGLVPIVEPEILLDGEHGIDRTFEVAQKVWA 200
Query: 541 EVFYFLAKNN 570 EVFY+LA+NN Sbjct: 201 EVFYYLAENN 210
>sp|Q9SJU4|ALFC1_ARATH Probable fructose-bisphosphate aldolase 1, chloroplastic OS=Arabidopsis thaliana GN=FBA1 PE=1 SV=2 Length = 399
Score = 329 bits (844), Expect = 5e-90 Identities = 163/190 (85%), Positives = 174/190 (91%) Frame = +1
Query: 1 ILAMDESNATCGKRLASIGLENTEANRQAYRQLLCTAPGLGEYISGAILFEETLYQSTLD 180 I+AMDESNATCGKRLASIGLENTEANRQAYR LL +APGLG+YISGAILFEETLYQST D Sbjct: 70 IMAMDESNATCGKRLASIGLENTEANRQAYRTLLVSAPGLGQYISGAILFEETLYQSTTD 129
Query: 181 GKKFVDCLKEGGIAPGIKVDKGLVPLAGSNDESWCQGLDGLASRSAEYYKQGARFAKWRT 360 GKK VD L E I PGIKVDKGLVPL GS DESWCQGLDGLASR+A YY+QGARFAKWRT Sbjct: 130 GKKMVDVLVEQNIVPGIKVDKGLVPLVGSYDESWCQGLDGLASRTAAYYQQGARFAKWRT 189
Query: 361 VVSIPNGPSELAVQEAAWGLARYAAISQDNGLVPIVEPEILLDGEHGIDRTLAVAEKVWN 540 VVSIPNGPS LAV+EAAWGLARYAAISQD+GLVPIVEPEI+LDGEHGIDRT VAEKVW Sbjct: 190 VVSIPNGPSALAVKEAAWGLARYAAISQDSGLVPIVEPEIMLDGEHGIDRTYDVAEKVWA 249
Query: 541 EVFYFLAKNN 570 EVF++LA+NN Sbjct: 250 EVFFYLAQNN 259
>sp|P16096|ALFC_SPIOL Fructose-bisphosphate aldolase, chloroplastic OS=Spinacia oleracea PE=1 SV=3 Length = 394
Score = 323 bits (827), Expect = 5e-88 Identities = 159/190 (83%), Positives = 172/190 (90%) Frame = +1
Query: 1 ILAMDESNATCGKRLASIGLENTEANRQAYRQLLCTAPGLGEYISGAILFEETLYQSTLD 180 ILAMDESNATCGKRLASIGLENTEANRQAYR LL +APGLG+Y+SGAILFEETLYQST D Sbjct: 67 ILAMDESNATCGKRLASIGLENTEANRQAYRTLLISAPGLGQYVSGAILFEETLYQSTTD 126
Query: 181 GKKFVDCLKEGGIAPGIKVDKGLVPLAGSNDESWCQGLDGLASRSAEYYKQGARFAKWRT 360 GKK VD L E GI PGIKVDKG +PL GSNDESWCQGLDGLA RSA YY+QGARFAKWRT Sbjct: 127 GKKMVDVLIEQGIVPGIKVDKGWLPLPGSNDESWCQGLDGLACRSAAYYQQGARFAKWRT 186
Query: 361 VVSIPNGPSELAVQEAAWGLARYAAISQDNGLVPIVEPEILLDGEHGIDRTLAVAEKVWN 540 VVSIPNGPS LAV+EAAWGLARYAAI+QDNGL PI+EPEI+LDGEHGIDRT VA++VW Sbjct: 187 VVSIPNGPSALAVKEAAWGLARYAAITQDNGLDPILEPEIMLDGEHGIDRTFRVAQQVWA 246
Query: 541 EVFYFLAKNN 570 EVF+ LA+NN Sbjct: 247 EVFFNLAENN 256
>sp|Q944G9|ALFC2_ARATH Probable fructose-bisphosphate aldolase 2, chloroplastic OS=Arabidopsis thaliana GN=FBA2 PE=1 SV=1 Length = 398
Score = 318 bits (814), Expect = 2e-86 Identities = 158/190 (83%), Positives = 172/190 (90%) Frame = +1
Query: 1 ILAMDESNATCGKRLASIGLENTEANRQAYRQLLCTAPGLGEYISGAILFEETLYQSTLD 180 ILAMDESNATCGKRL SIGLENTEANRQA+R LL +APGLG+Y+SGAILFEETLYQST + Sbjct: 69 ILAMDESNATCGKRLDSIGLENTEANRQAFRTLLVSAPGLGQYVSGAILFEETLYQSTTE 128
Query: 181 GKKFVDCLKEGGIAPGIKVDKGLVPLAGSNDESWCQGLDGLASRSAEYYKQGARFAKWRT 360 GKK VD L E I PGIKVDKGLVPL GSN+ESW QGLDGL+SR+A YY+QGARFAKWRT Sbjct: 129 GKKMVDVLVEQNIVPGIKVDKGLVPLVGSNNESWGQGLDGLSSRTAAYYQQGARFAKWRT 188
Query: 361 VVSIPNGPSELAVQEAAWGLARYAAISQDNGLVPIVEPEILLDGEHGIDRTLAVAEKVWN 540 VVSIPNGPS LAV+EAAWGLARYAAISQD+GLVPIVEPEILLDGEH IDRT VAEKVW Sbjct: 189 VVSIPNGPSALAVKEAAWGLARYAAISQDSGLVPIVEPEILLDGEHDIDRTYDVAEKVWA 248
Query: 541 EVFYFLAKNN 570 EVF++LA+NN Sbjct: 249 EVFFYLAQNN 258
>sp|Q42690|ALFC_CHLRE Fructose-bisphosphate aldolase 1, chloroplastic OS=Chlamydomonas reinhardtii GN=ALDCHL PE=2 SV=1 Length = 374
Score = 263 bits (672), Expect = 5e-70 Identities = 136/189 (71%), Positives = 154/189 (81%) Frame = +1
Query: 1 ILAMDESNATCGKRLASIGLENTEANRQAYRQLLCTAPGLGEYISGAILFEETLYQSTLD 180 ILAMDESNATCGKRL SIG+ENTE NR+AYR+LL TAPGLG+YISGAILFEETLYQST Sbjct: 48 ILAMDESNATCGKRLDSIGVENTEENRRAYRELLVTAPGLGQYISGAILFEETLYQSTAS 107
Query: 181 GKKFVDCLKEGGIAPGIKVDKGLVPLAGSNDESWCQGLDGLASRSAEYYKQGARFAKWRT 360 GKKFVD +KE I PGIKVDKGLVP + SWC GLDG S +AEYYK GARFAKWR+ Sbjct: 108 GKKFVDVMKEQNIVPGIKVDKGLVP-CPTPTMSWCMGLDGWTS-AAEYYKAGARFAKWRS 165
Query: 361 VVSIPNGPSELAVQEAAWGLARYAAISQDNGLVPIVEPEILLDGEHGIDRTLAVAEKVWN 540 VVSIP+GPS + + A+GLARYAAI+Q+ GLVPIVEPE+LLDGEH IDR L V E +W Sbjct: 166 VVSIPHGPS-IMLPRLAYGLARYAAIAQNAGLVPIVEPEVLLDGEHDIDRCLEVQEAIWA 224
Query: 541 EVFYFLAKN 567 E F ++A N Sbjct: 225 ETFKYMADN 233
>sp|P29356|ALF_SPIOL Fructose-bisphosphate aldolase, cytoplasmic isozyme OS=Spinacia oleracea PE=2 SV=1 Length = 357
Score = 224 bits (571), Expect = 2e-58 Identities = 116/179 (64%), Positives = 133/179 (74%), Gaps = 1/179 (0%) Frame = +1
Query: 1 ILAMDESNATCGKRLASIGLENTEANRQAYRQLLCTAPGLGEYISGAILFEETLYQSTLD 180 ILA DES T GKR SI +EN E+NR+A R+LL T PG Y+SG ILFEETLYQ T D Sbjct: 26 ILAADESTGTIGKRFPSINVENVESNRRALRELLFTTPGALPYLSGVILFEETLYQKTAD 85
Query: 181 GKKFVDCLKEGGIAPGIKVDKGLVPLAGSNDESWCQGLDGLASRSAEYYKQGARFAKWRT 360 GK FVD +K+GG+ PGIKVDKG V LAG+N E+ QGLDGLA R A+YY GARFAKWR Sbjct: 86 GKPFVDAMKDGGVLPGIKVDKGTVELAGTNGETTTQGLDGLAQRCAQYYTAGARFAKWRA 145
Query: 361 VVSI-PNGPSELAVQEAAWGLARYAAISQDNGLVPIVEPEILLDGEHGIDRTLAVAEKV 534 V+ I P PS LA+ E A GLARY I Q+NGLVPIVEPEIL+DG H IDR V+E+V Sbjct: 146 VLKIGPTEPSPLAILENANGLARYGIICQENGLVPIVEPEILVDGTHDIDRCAEVSERV 204
>sp|P08440|ALF_MAIZE Fructose-bisphosphate aldolase, cytoplasmic isozyme OS=Zea mays PE=2 SV=1 Length = 355
Score = 216 bits (551), Expect = 5e-56 Identities = 113/179 (63%), Positives = 131/179 (73%), Gaps = 1/179 (0%) Frame = +1
Query: 1 ILAMDESNATCGKRLASIGLENTEANRQAYRQLLCTAPGLGEYISGAILFEETLYQSTLD 180 ILA DES T GKRL+SI +EN E NR+A R+LL PG +YISG ILFEETLYQ T D Sbjct: 26 ILAADESTGTIGKRLSSINVENVEENRRALRELLFCCPGALQYISGVILFEETLYQKTKD 85
Query: 181 GKKFVDCLKEGGIAPGIKVDKGLVPLAGSNDESWCQGLDGLASRSAEYYKQGARFAKWRT 360 GK FVD LKEGG+ PGIKVDKG + + G++ E+ QG D L R A+YY+ GARFAKWR Sbjct: 86 GKPFVDVLKEGGVLPGIKVDKGTIEVVGTDKETTTQGHDDLGKRCAKYYEAGARFAKWRA 145
Query: 361 VVSI-PNGPSELAVQEAAWGLARYAAISQDNGLVPIVEPEILLDGEHGIDRTLAVAEKV 534 V+ I PN PS+LA+ A GLARYA I Q+NGLVPIVEPEIL+DG H IDR V E V Sbjct: 146 VLKIGPNEPSQLAIDLNAQGLARYAIICQENGLVPIVEPEILVDGPHDIDRCAYVTETV 204
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A9TPN5 |
Definition |
tr|A9TPN5|A9TPN5_PHYPA Fructose-bisphosphate aldolase OS=Physcomitrella patens subsp. patens |
Align length |
190 |
Score (bit) |
343.0 |
E-value |
3.0e-93 |
Report |
|