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NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
DK955348
Clone id TST39A01NGRL0022_N19
Library
Length 556
Definition Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0022_N19. 5' end sequence.
Accession
Tissue type prothallia with plantlets
Developmental stage gametophytes with sporophytes
Contig ID -
Sequence 
CGAGTATCCTGTACCTTGACAGTTTGAAGGTTATTGGGGATGTTTGGTTTGGCAGTGGCA
TTGTCTTGAAGGGAAAGGTAATTGTGGAGGCTAAAAAAGGTGAAAAGCTTGCGCTTCCAG
ACGATTCGACCATCGAAAACAAGCACATCACATCTGGGCCAACCTATTCTCCTCTTTAGA
AGCTCTCCCCTTTTCTCAGGCTAGTACATACAGAGTTTTTGAGTACCCTTCTTGTTCCCT
CTCTTGCAAGAAGCAAGGAAGAAGCTTCATTGTGCATGGGCTCTTGCAGGAGATCCACTT
TCTGCAGTGTGTGGAATTTCTTCATTTCCAGTTATCAGGTGTCTTAAGTACAGGCAAAGT
CGATCTCCCAGCATTATGCAATATATAAATTTTGACAATTTATTGCAATATTGGTTAGTG
TTCATCTAGTTGTTGAAGAGTATTGTATACATGCCTTGGGATTGTTTGTATTTGAAGCCC
AATGTTTAGGCCCATCTACTGAAGGGAACCTTCAAGCACTCTAAAATTGTGATCTTTGTT
CTAAAAAAAAAAAAAA
■■Homology search results ■■ -
sp_hit_id P57751
Definition sp|P57751|UGPA1_ARATH UTP--glucose-1-phosphate uridylyltransferase 1 OS=Arabidopsis thaliana
Align length 53
Score (bit) 70.9
E-value 4.0e-12
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK955348|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0022_N19, 5'
         (542 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|P57751|UGPA1_ARATH UTP--glucose-1-phosphate uridylyltransfera...    71   4e-12
sp|Q9M9P3|UGPA2_ARATH Probable UTP--glucose-1-phosphate uridylyl...    70   7e-12
sp|P19595|UGPA_SOLTU UTP--glucose-1-phosphate uridylyltransferas...    69   2e-11
sp|O64459|UGPA_PYRPY UTP--glucose-1-phosphate uridylyltransferas...    69   2e-11
sp|Q9LKG7|UGPA_ASTME UTP--glucose-1-phosphate uridylyltransferas...    68   3e-11
sp|Q9SDX3|UGPA_MUSAC UTP--glucose-1-phosphate uridylyltransferas...    64   6e-10
sp|Q43772|UGPA_HORVU UTP--glucose-1-phosphate uridylyltransferas...    63   8e-10
sp|P08800|UGPA1_DICDI UTP--glucose-1-phosphate uridylyltransfera...    52   2e-06
sp|Q54YZ0|UGPA2_DICDI UTP--glucose-1-phosphate uridylyltransfera...    49   2e-05
sp|Q91ZJ5|UGPA_MOUSE UTP--glucose-1-phosphate uridylyltransferas...    46   1e-04
sp|Q16851|UGPA_HUMAN UTP--glucose-1-phosphate uridylyltransferas...    46   1e-04
sp|O35156|UGPA_CRIGR UTP--glucose-1-phosphate uridylyltransferas...    46   1e-04
sp|Q07130|UGPA_BOVIN UTP--glucose-1-phosphate uridylyltransferas...    46   1e-04
sp|P79303|UGPA_PIG UTP--glucose-1-phosphate uridylyltransferase ...    44   5e-04
sp|P38709|UGPA2_YEAST Probable UTP--glucose-1-phosphate uridylyl...    43   9e-04
sp|P78811|UGPA1_SCHPO Probable UTP--glucose-1-phosphate uridylyl...    42   0.002
sp|P32861|UGPA1_YEAST UTP--glucose-1-phosphate uridylyltransfera...    41   0.003
sp|O59819|UGPA2_SCHPO Probable UTP--glucose-1-phosphate uridylyl...    40   0.006
sp|Q09MB8|YCF1_CITSI Putative membrane protein ycf1 OS=Citrus si...    30   7.6  

>sp|P57751|UGPA1_ARATH UTP--glucose-1-phosphate uridylyltransferase
           1 OS=Arabidopsis thaliana GN=At5g17310 PE=2 SV=1
          Length = 470

 Score = 70.9 bits (172), Expect = 4e-12
 Identities = 35/53 (66%), Positives = 43/53 (81%)
 Frame = +3

Query: 3   SILYLDSLKVIGDVWFGSGIVLKGKVIVEAKKGEKLALPDDSTIENKHITSGP 161
           SI+ LDSLKV GDVWFGSG+VLKGKV V+A  G KL +PD++ +ENK I +GP
Sbjct: 416 SIVELDSLKVSGDVWFGSGVVLKGKVTVKANAGTKLEIPDNAVLENKDI-NGP 467


>sp|Q9M9P3|UGPA2_ARATH Probable UTP--glucose-1-phosphate
           uridylyltransferase 2 OS=Arabidopsis thaliana
           GN=At3g03250 PE=1 SV=1
          Length = 469

 Score = 70.1 bits (170), Expect = 7e-12
 Identities = 36/53 (67%), Positives = 42/53 (79%)
 Frame = +3

Query: 3   SILYLDSLKVIGDVWFGSGIVLKGKVIVEAKKGEKLALPDDSTIENKHITSGP 161
           SI+ LDSLKV GDVWFGS IVLKGKV V AK G KL +PD + +ENK+I +GP
Sbjct: 415 SIVELDSLKVSGDVWFGSSIVLKGKVTVAAKSGVKLEIPDRAVVENKNI-NGP 466


>sp|P19595|UGPA_SOLTU UTP--glucose-1-phosphate uridylyltransferase
           OS=Solanum tuberosum PE=1 SV=3
          Length = 477

 Score = 68.6 bits (166), Expect = 2e-11
 Identities = 35/53 (66%), Positives = 40/53 (75%)
 Frame = +3

Query: 3   SILYLDSLKVIGDVWFGSGIVLKGKVIVEAKKGEKLALPDDSTIENKHITSGP 161
           SI+ LDSLKV GDVWFGSG+ LKGKV V AK G KL +PD + I NK I +GP
Sbjct: 423 SIIDLDSLKVTGDVWFGSGVTLKGKVTVAAKSGVKLEIPDGAVIANKDI-NGP 474


>sp|O64459|UGPA_PYRPY UTP--glucose-1-phosphate uridylyltransferase
           OS=Pyrus pyrifolia PE=2 SV=1
          Length = 471

 Score = 68.6 bits (166), Expect = 2e-11
 Identities = 34/53 (64%), Positives = 42/53 (79%)
 Frame = +3

Query: 3   SILYLDSLKVIGDVWFGSGIVLKGKVIVEAKKGEKLALPDDSTIENKHITSGP 161
           SIL L+SLKV GDVWFG+G+VLKGKV + AK G KL +PD++ I NK I +GP
Sbjct: 417 SILELESLKVSGDVWFGAGVVLKGKVTITAKSGVKLEIPDNAVIANKDI-NGP 468


>sp|Q9LKG7|UGPA_ASTME UTP--glucose-1-phosphate uridylyltransferase
           OS=Astragalus membranaceus GN=UGP PE=2 SV=1
          Length = 471

 Score = 68.2 bits (165), Expect = 3e-11
 Identities = 32/53 (60%), Positives = 42/53 (79%)
 Frame = +3

Query: 3   SILYLDSLKVIGDVWFGSGIVLKGKVIVEAKKGEKLALPDDSTIENKHITSGP 161
           SI+ LDSLKV+GDVWFG+G++LKGKV + AK G K+ +PD + I NK I +GP
Sbjct: 417 SIVELDSLKVVGDVWFGTGVILKGKVSIVAKSGVKVEIPDGAVIANKEI-NGP 468


>sp|Q9SDX3|UGPA_MUSAC UTP--glucose-1-phosphate uridylyltransferase
           OS=Musa acuminata GN=UGPA PE=2 SV=1
          Length = 467

 Score = 63.5 bits (153), Expect = 6e-10
 Identities = 31/53 (58%), Positives = 39/53 (73%)
 Frame = +3

Query: 3   SILYLDSLKVIGDVWFGSGIVLKGKVIVEAKKGEKLALPDDSTIENKHITSGP 161
           SI+ LDSLKV GDVWFG G+VLKG V + AK G KL + D + +ENK + +GP
Sbjct: 413 SIVELDSLKVSGDVWFGEGVVLKGNVSIAAKSGVKLEISDGAVLENK-VINGP 464


>sp|Q43772|UGPA_HORVU UTP--glucose-1-phosphate uridylyltransferase
           OS=Hordeum vulgare PE=2 SV=1
          Length = 473

 Score = 63.2 bits (152), Expect = 8e-10
 Identities = 33/53 (62%), Positives = 40/53 (75%)
 Frame = +3

Query: 3   SILYLDSLKVIGDVWFGSGIVLKGKVIVEAKKGEKLALPDDSTIENKHITSGP 161
           SI+ LDSLKV GDV FGSG+VLKG V + AK G KL +PD + +ENK I +GP
Sbjct: 419 SIVELDSLKVSGDVSFGSGVVLKGNVTIAAKAGVKLEIPDGAVLENKDI-NGP 470


>sp|P08800|UGPA1_DICDI UTP--glucose-1-phosphate uridylyltransferase
           1 OS=Dictyostelium discoideum GN=uppA PE=2 SV=2
          Length = 511

 Score = 51.6 bits (122), Expect = 2e-06
 Identities = 25/46 (54%), Positives = 32/46 (69%)
 Frame = +3

Query: 6   ILYLDSLKVIGDVWFGSGIVLKGKVIVEAKKGEKLALPDDSTIENK 143
           +L LD L V GDV+FGS I LKG VI+ A  GE++ +PD   +ENK
Sbjct: 455 LLELDHLTVSGDVYFGSRITLKGTVIIVANHGERVDIPDGVVLENK 500


>sp|Q54YZ0|UGPA2_DICDI UTP--glucose-1-phosphate uridylyltransferase
           2 OS=Dictyostelium discoideum GN=ugpB PE=2 SV=1
          Length = 502

 Score = 48.5 bits (114), Expect = 2e-05
 Identities = 23/49 (46%), Positives = 32/49 (65%)
 Frame = +3

Query: 6   ILYLDSLKVIGDVWFGSGIVLKGKVIVEAKKGEKLALPDDSTIENKHIT 152
           IL LD L V GD+ FG  +VLKG VI+ A  G ++ +P+ S  ENK ++
Sbjct: 446 ILELDQLTVSGDITFGPNMVLKGTVIIVANHGSRIDIPEGSEFENKVVS 494


>sp|Q91ZJ5|UGPA_MOUSE UTP--glucose-1-phosphate uridylyltransferase
           OS=Mus musculus GN=Ugp2 PE=2 SV=3
          Length = 508

 Score = 45.8 bits (107), Expect = 1e-04
 Identities = 24/51 (47%), Positives = 33/51 (64%)
 Frame = +3

Query: 6   ILYLDSLKVIGDVWFGSGIVLKGKVIVEAKKGEKLALPDDSTIENKHITSG 158
           +L LD L V GDV FG  + LKG VI+ A  G+++ +P  + +ENK I SG
Sbjct: 452 MLELDHLTVSGDVTFGKNVSLKGTVIIIANHGDRIDIPPGAVLENK-IVSG 501
tr_hit_id A9S087
Definition tr|A9S087|A9S087_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens
Align length 47
Score (bit) 77.4
E-value 4.0e-13
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK955348|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0022_N19, 5'
         (542 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|A9S087|A9S087_PHYPA Predicted protein OS=Physcomitrella paten...    77   4e-13
tr|A6N839|A6N839_PINTA UDP-glucose pyrophosphorylase OS=Pinus ta...    76   1e-12
tr|B8LNP1|B8LNP1_PICSI Putative uncharacterized protein OS=Picea...    75   2e-12
tr|B8LRA3|B8LRA3_PICSI Putative uncharacterized protein OS=Picea...    73   1e-11
tr|A9NUR9|A9NUR9_PICSI Putative uncharacterized protein OS=Picea...    73   1e-11
tr|Q6Y643|Q6Y643_BAMOL UDP-glucose pyrophosphorylase OS=Bambusa ...    69   1e-10
tr|B8YIE2|B8YIE2_SACOF UDP-glucose pyrophosphorylase OS=Saccharu...    69   1e-10
tr|A7QBA6|A7QBA6_VITVI Chromosome chr4 scaffold_73, whole genome...    69   2e-10
tr|Q84UG8|Q84UG8_SOLTU UTP:alpha-D-glucose-1-phosphate uridylylt...    69   2e-10
tr|Q84UG7|Q84UG7_SOLTU UTP:alpha-D-glucose-1-phosphate uridylylt...    69   2e-10
tr|Q5F1U6|Q5F1U6_SOLTU UTP:alpha-D-glucose-1-phosphate uridylylt...    69   2e-10
tr|Q3HVN2|Q3HVN2_SOLTU UDP-glucose pyrophosphorylase-like protei...    69   2e-10
tr|Q19TV8|Q19TV8_CUCME UDP-glucose pyrophosphorylase OS=Cucumis ...    68   3e-10
tr|B6T4R3|B6T4R3_MAIZE UTP--glucose-1-phosphate uridylyltransfer...    68   3e-10
tr|B4F8W6|B4F8W6_MAIZE Putative uncharacterized protein OS=Zea m...    68   3e-10
tr|Q2V506|Q2V506_9ROSI UDP-glucose pyrophosphorylase OS=Populus ...    68   4e-10
tr|B4FAD9|B4FAD9_MAIZE Putative uncharacterized protein OS=Zea m...    68   4e-10
tr|A4KC21|A4KC21_ORYSI UDP-glucose pyrophosphorylase OS=Oryza sa...    68   4e-10
tr|Q8W557|Q8W557_9FABA UDP-glucose pyrophosphorylase OS=Amorpha ...    67   6e-10
tr|B3VDY8|B3VDY8_EUCGR UTP-glucose 1 phosphate uridylyltransfera...    67   6e-10
tr|Q8W3Z7|Q8W3Z7_TOBAC UDP-glucose pyrophosphorylase (Fragment) ...    67   8e-10
tr|Q84UG9|Q84UG9_SOLTU UTP:alpha-D-glucose-1-phosphate uridylylt...    67   8e-10
tr|A8W7I0|A8W7I0_9POAL UDP-glucose pyrophosphorylase OS=Dendroca...    67   8e-10
tr|A9TPV2|A9TPV2_PHYPA Predicted protein OS=Physcomitrella paten...    66   1e-09
tr|Q9M4X0|Q9M4X0_ORYSI UDP-glucose pyrophosphorylase OS=Oryza sa...    65   2e-09
tr|Q6ZGL5|Q6ZGL5_ORYSJ Os02g0117700 protein OS=Oryza sativa subs...    65   2e-09
tr|B8AGI4|B8AGI4_ORYSI Putative uncharacterized protein OS=Oryza...    65   2e-09
tr|A3A2G7|A3A2G7_ORYSJ Putative uncharacterized protein OS=Oryza...    65   2e-09
tr|Q93X08|Q93X08_ORYSJ Os09g0553200 protein OS=Oryza sativa subs...    64   4e-09
tr|A3QQQ3|A3QQQ3_ORYSI Putative uncharacterized protein OS=Oryza...    64   4e-09

>tr|A9S087|A9S087_PHYPA Predicted protein OS=Physcomitrella patens
           subsp. patens GN=PHYPADRAFT_179979 PE=4 SV=1
          Length = 474

 Score = 77.4 bits (189), Expect = 4e-13
 Identities = 38/47 (80%), Positives = 41/47 (87%)
 Frame = +3

Query: 3   SILYLDSLKVIGDVWFGSGIVLKGKVIVEAKKGEKLALPDDSTIENK 143
           SI+ LDSLKV GDVWFG  IVLKGKVIVEA KGEKL LPDD+TIE+K
Sbjct: 424 SIIELDSLKVSGDVWFGENIVLKGKVIVEAAKGEKLVLPDDATIEDK 470


>tr|A6N839|A6N839_PINTA UDP-glucose pyrophosphorylase OS=Pinus taeda
           GN=UGP1 PE=2 SV=1
          Length = 480

 Score = 75.9 bits (185), Expect = 1e-12
 Identities = 35/51 (68%), Positives = 44/51 (86%)
 Frame = +3

Query: 3   SILYLDSLKVIGDVWFGSGIVLKGKVIVEAKKGEKLALPDDSTIENKHITS 155
           SI+ LDSLKV GDVWFGSG++LKGKVI+EAK+G  L +PD+S IENK ++S
Sbjct: 424 SIIDLDSLKVSGDVWFGSGVILKGKVIIEAKQGATLEVPDESVIENKVVSS 474


>tr|B8LNP1|B8LNP1_PICSI Putative uncharacterized protein OS=Picea
           sitchensis PE=2 SV=1
          Length = 480

 Score = 75.5 bits (184), Expect = 2e-12
 Identities = 36/47 (76%), Positives = 41/47 (87%)
 Frame = +3

Query: 3   SILYLDSLKVIGDVWFGSGIVLKGKVIVEAKKGEKLALPDDSTIENK 143
           SI+ LDSLKV GDVWFGSGI+LKGKV VEAK+G KL +PD+S IENK
Sbjct: 424 SIIELDSLKVSGDVWFGSGIILKGKVTVEAKQGGKLEIPDESVIENK 470


>tr|B8LRA3|B8LRA3_PICSI Putative uncharacterized protein OS=Picea
           sitchensis PE=2 SV=1
          Length = 236

 Score = 72.8 bits (177), Expect = 1e-11
 Identities = 35/51 (68%), Positives = 43/51 (84%)
 Frame = +3

Query: 3   SILYLDSLKVIGDVWFGSGIVLKGKVIVEAKKGEKLALPDDSTIENKHITS 155
           SI+ LDSLKV GDVWFGS I+LKGKV VEAK+G KL +PD+S IENK +++
Sbjct: 180 SIIDLDSLKVSGDVWFGSEIILKGKVTVEAKQGGKLEIPDESVIENKVVSN 230


>tr|A9NUR9|A9NUR9_PICSI Putative uncharacterized protein OS=Picea
           sitchensis PE=2 SV=1
          Length = 480

 Score = 72.8 bits (177), Expect = 1e-11
 Identities = 35/51 (68%), Positives = 43/51 (84%)
 Frame = +3

Query: 3   SILYLDSLKVIGDVWFGSGIVLKGKVIVEAKKGEKLALPDDSTIENKHITS 155
           SI+ LDSLKV GDVWFGS I+LKGKV VEAK+G KL +PD+S IENK +++
Sbjct: 424 SIIDLDSLKVSGDVWFGSEIILKGKVTVEAKQGGKLEIPDESVIENKVVSN 474


>tr|Q6Y643|Q6Y643_BAMOL UDP-glucose pyrophosphorylase OS=Bambusa
           oldhamii GN=UGP PE=2 SV=1
          Length = 473

 Score = 69.3 bits (168), Expect = 1e-10
 Identities = 34/53 (64%), Positives = 41/53 (77%)
 Frame = +3

Query: 3   SILYLDSLKVIGDVWFGSGIVLKGKVIVEAKKGEKLALPDDSTIENKHITSGP 161
           SI+ LDS+KV GDVWFGSGI LKGKV + AK G KL +PD + +ENK I +GP
Sbjct: 419 SIVELDSMKVSGDVWFGSGITLKGKVTISAKSGVKLEIPDGTVLENKDI-NGP 470


>tr|B8YIE2|B8YIE2_SACOF UDP-glucose pyrophosphorylase OS=Saccharum
           officinarum PE=2 SV=1
          Length = 476

 Score = 69.3 bits (168), Expect = 1e-10
 Identities = 34/53 (64%), Positives = 41/53 (77%)
 Frame = +3

Query: 3   SILYLDSLKVIGDVWFGSGIVLKGKVIVEAKKGEKLALPDDSTIENKHITSGP 161
           SI+ LDSLKV GDVWFGSGI LKGKV + AK G KL +PD + +ENK + +GP
Sbjct: 422 SIVELDSLKVSGDVWFGSGITLKGKVTITAKSGVKLEIPDGAVLENKDV-NGP 473


>tr|A7QBA6|A7QBA6_VITVI Chromosome chr4 scaffold_73, whole genome
           shotgun sequence OS=Vitis vinifera GN=GSVIVT00034877001
           PE=4 SV=1
          Length = 465

 Score = 68.9 bits (167), Expect = 2e-10
 Identities = 32/53 (60%), Positives = 42/53 (79%)
 Frame = +3

Query: 3   SILYLDSLKVIGDVWFGSGIVLKGKVIVEAKKGEKLALPDDSTIENKHITSGP 161
           SI+ LDSLKV GDVWFGSG++LKGKV +EAK G KL +P+ + + NK + +GP
Sbjct: 411 SIIELDSLKVAGDVWFGSGVILKGKVTIEAKAGVKLEIPNGAVVANK-VINGP 462


>tr|Q84UG8|Q84UG8_SOLTU UTP:alpha-D-glucose-1-phosphate
           uridylyltransferase OS=Solanum tuberosum PE=2 SV=1
          Length = 477

 Score = 68.6 bits (166), Expect = 2e-10
 Identities = 35/53 (66%), Positives = 40/53 (75%)
 Frame = +3

Query: 3   SILYLDSLKVIGDVWFGSGIVLKGKVIVEAKKGEKLALPDDSTIENKHITSGP 161
           SI+ LDSLKV GDVWFGSG+ LKGKV V AK G KL +PD + I NK I +GP
Sbjct: 423 SIIDLDSLKVTGDVWFGSGVTLKGKVTVAAKSGVKLEIPDGAVIANKDI-NGP 474


>tr|Q84UG7|Q84UG7_SOLTU UTP:alpha-D-glucose-1-phosphate
           uridylyltransferase OS=Solanum tuberosum PE=2 SV=1
          Length = 477

 Score = 68.6 bits (166), Expect = 2e-10
 Identities = 35/53 (66%), Positives = 40/53 (75%)
 Frame = +3

Query: 3   SILYLDSLKVIGDVWFGSGIVLKGKVIVEAKKGEKLALPDDSTIENKHITSGP 161
           SI+ LDSLKV GDVWFGSG+ LKGKV V AK G KL +PD + I NK I +GP
Sbjct: 423 SIIDLDSLKVTGDVWFGSGVTLKGKVTVAAKSGVKLEIPDGAVIANKDI-NGP 474