DK955357 |
Clone id |
TST39A01NGRL0022_O04 |
Library |
TST39 |
Length |
690 |
Definition |
Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0022_O04. 5' end sequence. |
Accession |
DK955357 |
Tissue type |
prothallia with plantlets |
Developmental stage |
gametophytes with sporophytes |
Contig ID |
CL4023Contig1 |
Sequence |
CTAGAGTGTTATCCTATCCACCTTCTCTCTCGTCTACTCTCCTCTGCGCGCCATGTCCAT TGCGAGGCCATTGGCTTCTGCTGGCGCACCCTACAGGTGGTATCAGAGCACCAGGAAGAG AAACAATTCAAAAGTCTTGGCTCTTCCACACCTCGCTTTGACAATGAGAAGGATGGAGAG GAGGGCAGTGTGAGCAATTGATGGGAAGTGGCGACGTTCAGGTAGTTTTGAGAGAACGAT TGAGGAAGGATTCTAACAGTGAATGCGATCAAGGGTGTGTCGAGCAGGCGGAGATGAGGA GATTGGGTCGGAGCAGGACTACGCCAAAGATGGCGAATTGGAGGCAAGGGACTCAGGCCC GGAGCCGGTTGTGACAGAGAGGCCGGAAGCACGTTGTTAGGCTAAGGGCGGTTGAGGAAC AGGTCAGCGCTAGAGCGAATGGTGTAACTGGGAATAAGTGCGGACCAGCAGGCTCTGCCA TGCTACACACACAGTGATGTCATCCCACATGTTTTTTTTTTCTAGTCTGAAGTATTATCA TGGCTTTGCTCTATTTATTTTTTTTGGAGGATATTCACACGAAAATCGATTAACGATGAT GTCACTAAAAGTGTACAATGGAAATGAATGAATATTTTATATGAAAAAAACTCCCCTTAT TGATCCGTGGCAAAAAAAAAAAAAAAAAAA |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q494R0 |
Definition |
sp|Q494R0|YP028_HUMAN Uncharacterized protein LOC283932 OS=Homo sapiens |
Align length |
84 |
Score (bit) |
32.7 |
E-value |
1.8 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A8IZR0 |
Definition |
tr|A8IZR0|A8IZR0_CHLRE Predicted protein OS=Chlamydomonas reinhardtii |
Align length |
48 |
Score (bit) |
36.6 |
E-value |
1.5 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK955357|Adiantum capillus-veneris mRNA, clone: TST39A01NGRL0022_O04, 5' (671 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|A8IZR0|A8IZR0_CHLRE Predicted protein OS=Chlamydomonas reinha... 37 1.5 tr|B7QI88|B7QI88_IXOSC Monocarboxylate transporter, putative OS=... 36 1.9 tr|Q5KHI0|Q5KHI0_CRYNE Putative uncharacterized protein OS=Crypt... 36 1.9 tr|A9S9Z6|A9S9Z6_PHYPA Predicted protein OS=Physcomitrella paten... 36 2.5 tr|B0L5P4|B0L5P4_CALMS COUP-TF/Svp nuclear hormone receptor OS=C... 36 2.5 tr|B5LVY9|B5LVY9_SACKO Runt protein OS=Saccoglossus kowalevskii ... 35 3.3 tr|Q0JKB9|Q0JKB9_ORYSJ Os01g0685200 protein OS=Oryza sativa subs... 35 5.6 tr|Q5B8M8|Q5B8M8_EMENI Putative uncharacterized protein OS=Emeri... 35 5.6 tr|A7CYE1|A7CYE1_9BACT Putative uncharacterized protein OS=Opitu... 34 7.3 tr|Q4DSJ8|Q4DSJ8_TRYCR Protein kinase, putative OS=Trypanosoma c... 34 7.3 tr|Q1JT09|Q1JT09_TOXGO Putative uncharacterized protein OS=Toxop... 34 7.3 tr|B6KQI8|B6KQI8_TOXGO Putative uncharacterized protein OS=Toxop... 34 7.3 tr|A8N1S1|A8N1S1_COPC7 Putative uncharacterized protein OS=Copri... 34 7.3 tr|A8I172|A8I172_CHLRE Predicted protein OS=Chlamydomonas reinha... 34 9.5 tr|Q4E3T2|Q4E3T2_TRYCR Protein kinase, putative OS=Trypanosoma c... 34 9.5 tr|Q2URR9|Q2URR9_ASPOR Sensory transduction histidine kinase OS=... 34 9.5 tr|B8MY27|B8MY27_ASPFL Sensor histidine kinase/response regulato... 34 9.5 tr|B2ALF2|B2ALF2_PODAN Predicted CDS Pa_5_3200 OS=Podospora anse... 34 9.5
>tr|A8IZR0|A8IZR0_CHLRE Predicted protein OS=Chlamydomonas reinhardtii GN=CHLREDRAFT_173556 PE=4 SV=1 Length = 1555
Score = 36.6 bits (83), Expect = 1.5 Identities = 20/48 (41%), Positives = 25/48 (52%) Frame = -1
Query: 407 P*PNNVLPASLSQPAPGLSPLPPIRHLWRSPAPTQSPHLRLLDTPLIA 264 P P V P SL +PAP SP P +PAPT +P L + P +A Sbjct: 239 PQPQAVAPPSLEEPAPSPSPAP-------TPAPTPAPPLEPANAPALA 279
>tr|B7QI88|B7QI88_IXOSC Monocarboxylate transporter, putative OS=Ixodes scapularis GN=IscW_ISCW013878 PE=4 SV=1 Length = 476
Score = 36.2 bits (82), Expect = 1.9 Identities = 19/53 (35%), Positives = 30/53 (56%), Gaps = 5/53 (9%) Frame = +2
Query: 473 LCHATHTVMSSHMFFFSSLKYYHGFALF-----IFFGGYSHENRLTMMSLKVY 616 LC A ++S+ + F++L YHG+ LF +F+GGY + SLK+Y Sbjct: 259 LCQAAALMISAALLAFTALHQYHGYLLFVWIYGVFYGGYQY-------SLKMY 304
>tr|Q5KHI0|Q5KHI0_CRYNE Putative uncharacterized protein OS=Cryptococcus neoformans GN=CNBD0030 PE=4 SV=1 Length = 218
Score = 36.2 bits (82), Expect = 1.9 Identities = 28/87 (32%), Positives = 41/87 (47%), Gaps = 1/87 (1%) Frame = -1
Query: 455 IPSYTIRSSADLFLNRP*PNNVLPASLSQPAPGLSPLPPIRHLWRSPA-PTQSPHLRLLD 279 +PS+T + L P P +LP L +P LSPLPP H PA SP R+ Sbjct: 21 LPSFTRLPESSTVLPHPCPA-LLPPILLSLSPPLSPLPPAPHSRPFPAFQGYSPRRRVFP 79
Query: 278 TPLIAFTVRILPQSFSQNYLNVATSHQ 198 ++ R PQS + ++A ++Q Sbjct: 80 PTVLPLYPRSFPQSPEEPDHHLAATNQ 106
>tr|A9S9Z6|A9S9Z6_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_163695 PE=4 SV=1 Length = 824
Score = 35.8 bits (81), Expect = 2.5 Identities = 25/68 (36%), Positives = 31/68 (45%), Gaps = 7/68 (10%) Frame = -1
Query: 386 PASLSQPAPGLSPLPPIRHLWRSPAPTQSPHLRLLDTP-LIAFTVRILPQS------FSQ 228 P +L++P P H RSP P SP R LD P I+F R+ P S FS Sbjct: 510 PTNLNRPLTSTRAAPDTHHQSRSPLPPPSPQTRPLDLPRAISFNSRLHPGSGGHVSNFSL 569
Query: 227 NYLNVATS 204 + N A S Sbjct: 570 DSKNAARS 577
>tr|B0L5P4|B0L5P4_CALMS COUP-TF/Svp nuclear hormone receptor OS=Callosobruchus maculatus GN=Svp PE=2 SV=1 Length = 419
Score = 35.8 bits (81), Expect = 2.5 Identities = 25/66 (37%), Positives = 33/66 (50%) Frame = -1
Query: 395 NVLPASLSQPAPGLSPLPPIRHLWRSPAPTQSPHLRLLDTPLIAFTVRILPQSFSQNYLN 216 N +P SL+ GL+PLPP +L +P PT + L+TP I R P SQN N Sbjct: 15 NPIPTSLNSLPNGLNPLPPAGNL--NPLPTNINPI-TLETPDIGLINRQTPSQNSQNSAN 71
Query: 215 VATSHQ 198 +Q Sbjct: 72 SNDKNQ 77
>tr|B5LVY9|B5LVY9_SACKO Runt protein OS=Saccoglossus kowalevskii GN=runt PE=2 SV=1 Length = 490
Score = 35.4 bits (80), Expect = 3.3 Identities = 28/94 (29%), Positives = 43/94 (45%), Gaps = 15/94 (15%) Frame = -1
Query: 464 SALIPSYTIRSSADLFLNRP*PNNVLPASLSQP-----APGLSPLPPIR---HLWRSPAP 309 SA IP + +L P P++V P S S P +P +S PP + HL+ +PAP Sbjct: 350 SATIPILSPGIDTSRYLPLPSPHDVYPTSPSTPVTLPASPYISGSPPYQLYAHLYSTPAP 409
Query: 308 TQ-------SPHLRLLDTPLIAFTVRILPQSFSQ 228 +PHL +L T ++ + + SQ Sbjct: 410 ASHPPYYEGTPHLSMLPTTTVSSRISTMIGRSSQ 443
>tr|Q0JKB9|Q0JKB9_ORYSJ Os01g0685200 protein OS=Oryza sativa subsp. japonica GN=Os01g0685200 PE=4 SV=1 Length = 479
Score = 34.7 bits (78), Expect = 5.6 Identities = 22/58 (37%), Positives = 25/58 (43%), Gaps = 6/58 (10%) Frame = -1
Query: 479 GRACWSALIPSYTIRSSADLFL------NRP*PNNVLPASLSQPAPGLSPLPPIRHLW 324 GRA WS P IRS A L L + P P + P P P PP+R LW Sbjct: 31 GRAAWSRRRPPLPIRSRARLPLPPLSPADAASPQPCSPTDAAAPPPRSLPTPPLRLLW 88
>tr|Q5B8M8|Q5B8M8_EMENI Putative uncharacterized protein OS=Emericella nidulans GN=AN3102.2 PE=4 SV=1 Length = 2312
Score = 34.7 bits (78), Expect = 5.6 Identities = 18/57 (31%), Positives = 28/57 (49%) Frame = -1
Query: 446 YTIRSSADLFLNRP*PNNVLPASLSQPAPGLSPLPPIRHLWRSPAPTQSPHLRLLDT 276 + +R +AD + P + P+S+++ +P PP RH WRS S L L T Sbjct: 83 FGLRHAADTDASTPLATSSGPSSITRSSPRTDARPPFRHHWRSSLSESSSELSLSRT 139
>tr|A7CYE1|A7CYE1_9BACT Putative uncharacterized protein OS=Opitutaceae bacterium TAV2 GN=ObacDRAFT_2735 PE=3 SV=1 Length = 280
Score = 34.3 bits (77), Expect = 7.3 Identities = 16/48 (33%), Positives = 26/48 (54%) Frame = -1
Query: 386 PASLSQPAPGLSPLPPIRHLWRSPAPTQSPHLRLLDTPLIAFTVRILP 243 PA +PAP LPP+ H R+P P ++ L +PL+ + ++P Sbjct: 41 PARSERPAP--PALPPVPHAIRAPGPPSHKIMKTLRSPLVVVLLGVVP 86
>tr|Q4DSJ8|Q4DSJ8_TRYCR Protein kinase, putative OS=Trypanosoma cruzi GN=Tc00.1047053508543.20 PE=4 SV=1 Length = 1113
Score = 34.3 bits (77), Expect = 7.3 Identities = 32/124 (25%), Positives = 49/124 (39%), Gaps = 18/124 (14%) Frame = +3
Query: 198 LMGSGDVQV------VLRERLRKDSNSECDQGCVEQAEMRRLGRSRTTPKMANWRQGTQA 359 + GS DV+V VL S+S+C +GC G Q Sbjct: 369 IRGSHDVEVGGNASDVLSNLSIPHSSSKCTEGC----------------------SGEQM 406
Query: 360 RSRL*QRGRKHV---VRLRAVEEQVSARANGVTGNKC---------GPAGSAMLHTQ*CH 503 + +HV RLR++E+++ + G G++C GP +A+LHT H Sbjct: 407 STETWDTRTRHVQLEARLRSLEKRLEQQLRGSVGHRCDTKALTASQGPEPAAVLHTSESH 466
Query: 504 PTCF 515 P F Sbjct: 467 PQEF 470
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