DK955357
Clone id TST39A01NGRL0022_O04
Library
Length 690
Definition Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0022_O04. 5' end sequence.
Accession
Tissue type prothallia with plantlets
Developmental stage gametophytes with sporophytes
Contig ID
Sequence
CTAGAGTGTTATCCTATCCACCTTCTCTCTCGTCTACTCTCCTCTGCGCGCCATGTCCAT
TGCGAGGCCATTGGCTTCTGCTGGCGCACCCTACAGGTGGTATCAGAGCACCAGGAAGAG
AAACAATTCAAAAGTCTTGGCTCTTCCACACCTCGCTTTGACAATGAGAAGGATGGAGAG
GAGGGCAGTGTGAGCAATTGATGGGAAGTGGCGACGTTCAGGTAGTTTTGAGAGAACGAT
TGAGGAAGGATTCTAACAGTGAATGCGATCAAGGGTGTGTCGAGCAGGCGGAGATGAGGA
GATTGGGTCGGAGCAGGACTACGCCAAAGATGGCGAATTGGAGGCAAGGGACTCAGGCCC
GGAGCCGGTTGTGACAGAGAGGCCGGAAGCACGTTGTTAGGCTAAGGGCGGTTGAGGAAC
AGGTCAGCGCTAGAGCGAATGGTGTAACTGGGAATAAGTGCGGACCAGCAGGCTCTGCCA
TGCTACACACACAGTGATGTCATCCCACATGTTTTTTTTTTCTAGTCTGAAGTATTATCA
TGGCTTTGCTCTATTTATTTTTTTTGGAGGATATTCACACGAAAATCGATTAACGATGAT
GTCACTAAAAGTGTACAATGGAAATGAATGAATATTTTATATGAAAAAAACTCCCCTTAT
TGATCCGTGGCAAAAAAAAAAAAAAAAAAA
■■Homology search results ■■ -
sp_hit_id Q494R0
Definition sp|Q494R0|YP028_HUMAN Uncharacterized protein LOC283932 OS=Homo sapiens
Align length 84
Score (bit) 32.7
E-value 1.8
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK955357|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0022_O04, 5'
(671 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q494R0|YP028_HUMAN Uncharacterized protein LOC283932 OS=Homo ... 33 1.8
sp|P41677|LEF7_NPVAC Late expression factor 7 OS=Autographa cali... 32 2.3
sp|Q9YLR1|POLN_HEVUS Non-structural polyprotein pORF1 OS=Hepatit... 32 3.0
sp|Q8N8W4|PLPL1_HUMAN Patatin-like phospholipase domain-containi... 32 4.0
sp|O60318|MCM3A_HUMAN 80 kDa MCM3-associated protein OS=Homo sap... 32 4.0
sp|Q6CBW0|NST1_YARLI Stress response protein NST1 OS=Yarrowia li... 31 6.8
sp|Q9UPN6|RBM16_HUMAN Putative RNA-binding protein 16 OS=Homo sa... 30 8.8

>sp|Q494R0|YP028_HUMAN Uncharacterized protein LOC283932 OS=Homo
sapiens PE=2 SV=1
Length = 122

Score = 32.7 bits (73), Expect = 1.8
Identities = 29/84 (34%), Positives = 36/84 (42%), Gaps = 2/84 (2%)
Frame = +3

Query: 90 PTGGIRAPGRETIQKSWLFHTSL*Q*EGWRGGQCEQLMGSGDVQVVLRERLRKDSNSECD 269
PT G R G ++ ++H Q W+G MG G R+R R +CD
Sbjct: 40 PTSGARPDGSCSLPAP-VYHLKSRQ---WKG------MGRG-----YRQRWRLQGRGDCD 84

Query: 270 QGCVEQAE--MRRLGRSRTTPKMA 335
GCV QA R RTT KMA
Sbjct: 85 MGCVVQASGLFPAEMRERTTKKMA 108


>sp|P41677|LEF7_NPVAC Late expression factor 7 OS=Autographa
californica nuclear polyhedrosis virus GN=LEF-7 PE=4
SV=1
Length = 226

Score = 32.3 bits (72), Expect = 2.3
Identities = 22/81 (27%), Positives = 38/81 (46%)
Frame = -1

Query: 458 LIPSYTIRSSADLFLNRP*PNNVLPASLSQPAPGLSPLPPIRHLWRSPAPTQSPHLRLLD 279
L+P + ++ +F N+ P +V +L+ P P L + LW A H R +D
Sbjct: 86 LVPLLSFGKASCVFFNKCIPEDVRIVTLNWPLPLLENFLSKQFLWYKLARKLIEHERRMD 145

Query: 278 TPLIAFTVRILPQSFSQNYLN 216
+ TV+I +++YLN
Sbjct: 146 RCVTPSTVQINLYDDNEDYLN 166


>sp|Q9YLR1|POLN_HEVUS Non-structural polyprotein pORF1 OS=Hepatitis
E virus genotype 3 (isolate Human/United States of
America/US2) GN=ORF1 PE=3 SV=1
Length = 1708

Score = 32.0 bits (71), Expect = 3.0
Identities = 16/46 (34%), Positives = 23/46 (50%), Gaps = 1/46 (2%)
Frame = -1

Query: 401 PNNVLPASLSQPAPGLS-PLPPIRHLWRSPAPTQSPHLRLLDTPLI 267
P PAS + APGL P PP+ +W P P++ H+ P +
Sbjct: 717 PEAAAPASAA--APGLPYPTPPVSDIWVLPPPSEESHVDAASVPSV 760


>sp|Q8N8W4|PLPL1_HUMAN Patatin-like phospholipase domain-containing
protein 1 OS=Homo sapiens GN=PNPLA1 PE=2 SV=2
Length = 532

Score = 31.6 bits (70), Expect = 4.0
Identities = 15/36 (41%), Positives = 22/36 (61%)
Frame = -1

Query: 401 PNNVLPASLSQPAPGLSPLPPIRHLWRSPAPTQSPH 294
P++ +SL P PGLSPL P + + S +P +S H
Sbjct: 381 PSSTPGSSLPTPPPGLSPLSPQQQVQPSGSPARSLH 416


>sp|O60318|MCM3A_HUMAN 80 kDa MCM3-associated protein OS=Homo sapiens
GN=MCM3AP PE=1 SV=2
Length = 1980

Score = 31.6 bits (70), Expect = 4.0
Identities = 16/32 (50%), Positives = 19/32 (59%)
Frame = -1

Query: 401 PNNVLPASLSQPAPGLSPLPPIRHLWRSPAPT 306
P + LP SL PAP PLPP+ L S AP+
Sbjct: 1025 PLSSLPQSLPAPAPSPVPLPPVLALTPSVAPS 1056


>sp|Q6CBW0|NST1_YARLI Stress response protein NST1 OS=Yarrowia
lipolytica GN=NST1 PE=3 SV=1
Length = 889

Score = 30.8 bits (68), Expect = 6.8
Identities = 19/58 (32%), Positives = 30/58 (51%), Gaps = 9/58 (15%)
Frame = -1

Query: 437 RSSADLFLNRP*PNNV-LPAS--------LSQPAPGLSPLPPIRHLWRSPAPTQSPHL 291
R+S + L++P P +PAS L QP P +P+ P+ + +SP+P P L
Sbjct: 576 RASMSIPLSKPLPGKTQIPASQPGTSLGGLQQPVPQAAPVAPVAMMPQSPSPQLPPGL 633


>sp|Q9UPN6|RBM16_HUMAN Putative RNA-binding protein 16 OS=Homo
sapiens GN=RBM16 PE=1 SV=1
Length = 1271

Score = 30.4 bits (67), Expect = 8.8
Identities = 14/30 (46%), Positives = 17/30 (56%)
Frame = -1

Query: 386 PASLSQPAPGLSPLPPIRHLWRSPAPTQSP 297
P S+ P PG SP+PP L S P+Q P
Sbjct: 660 PVSMPVPPPGFSPIPPPPFLRASFNPSQPP 689


tr_hit_id A8IZR0
Definition tr|A8IZR0|A8IZR0_CHLRE Predicted protein OS=Chlamydomonas reinhardtii
Align length 48
Score (bit) 36.6
E-value 1.5
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK955357|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0022_O04, 5'
(671 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|A8IZR0|A8IZR0_CHLRE Predicted protein OS=Chlamydomonas reinha... 37 1.5
tr|B7QI88|B7QI88_IXOSC Monocarboxylate transporter, putative OS=... 36 1.9
tr|Q5KHI0|Q5KHI0_CRYNE Putative uncharacterized protein OS=Crypt... 36 1.9
tr|A9S9Z6|A9S9Z6_PHYPA Predicted protein OS=Physcomitrella paten... 36 2.5
tr|B0L5P4|B0L5P4_CALMS COUP-TF/Svp nuclear hormone receptor OS=C... 36 2.5
tr|B5LVY9|B5LVY9_SACKO Runt protein OS=Saccoglossus kowalevskii ... 35 3.3
tr|Q0JKB9|Q0JKB9_ORYSJ Os01g0685200 protein OS=Oryza sativa subs... 35 5.6
tr|Q5B8M8|Q5B8M8_EMENI Putative uncharacterized protein OS=Emeri... 35 5.6
tr|A7CYE1|A7CYE1_9BACT Putative uncharacterized protein OS=Opitu... 34 7.3
tr|Q4DSJ8|Q4DSJ8_TRYCR Protein kinase, putative OS=Trypanosoma c... 34 7.3
tr|Q1JT09|Q1JT09_TOXGO Putative uncharacterized protein OS=Toxop... 34 7.3
tr|B6KQI8|B6KQI8_TOXGO Putative uncharacterized protein OS=Toxop... 34 7.3
tr|A8N1S1|A8N1S1_COPC7 Putative uncharacterized protein OS=Copri... 34 7.3
tr|A8I172|A8I172_CHLRE Predicted protein OS=Chlamydomonas reinha... 34 9.5
tr|Q4E3T2|Q4E3T2_TRYCR Protein kinase, putative OS=Trypanosoma c... 34 9.5
tr|Q2URR9|Q2URR9_ASPOR Sensory transduction histidine kinase OS=... 34 9.5
tr|B8MY27|B8MY27_ASPFL Sensor histidine kinase/response regulato... 34 9.5
tr|B2ALF2|B2ALF2_PODAN Predicted CDS Pa_5_3200 OS=Podospora anse... 34 9.5

>tr|A8IZR0|A8IZR0_CHLRE Predicted protein OS=Chlamydomonas
reinhardtii GN=CHLREDRAFT_173556 PE=4 SV=1
Length = 1555

Score = 36.6 bits (83), Expect = 1.5
Identities = 20/48 (41%), Positives = 25/48 (52%)
Frame = -1

Query: 407 P*PNNVLPASLSQPAPGLSPLPPIRHLWRSPAPTQSPHLRLLDTPLIA 264
P P V P SL +PAP SP P +PAPT +P L + P +A
Sbjct: 239 PQPQAVAPPSLEEPAPSPSPAP-------TPAPTPAPPLEPANAPALA 279


>tr|B7QI88|B7QI88_IXOSC Monocarboxylate transporter, putative
OS=Ixodes scapularis GN=IscW_ISCW013878 PE=4 SV=1
Length = 476

Score = 36.2 bits (82), Expect = 1.9
Identities = 19/53 (35%), Positives = 30/53 (56%), Gaps = 5/53 (9%)
Frame = +2

Query: 473 LCHATHTVMSSHMFFFSSLKYYHGFALF-----IFFGGYSHENRLTMMSLKVY 616
LC A ++S+ + F++L YHG+ LF +F+GGY + SLK+Y
Sbjct: 259 LCQAAALMISAALLAFTALHQYHGYLLFVWIYGVFYGGYQY-------SLKMY 304


>tr|Q5KHI0|Q5KHI0_CRYNE Putative uncharacterized protein
OS=Cryptococcus neoformans GN=CNBD0030 PE=4 SV=1
Length = 218

Score = 36.2 bits (82), Expect = 1.9
Identities = 28/87 (32%), Positives = 41/87 (47%), Gaps = 1/87 (1%)
Frame = -1

Query: 455 IPSYTIRSSADLFLNRP*PNNVLPASLSQPAPGLSPLPPIRHLWRSPA-PTQSPHLRLLD 279
+PS+T + L P P +LP L +P LSPLPP H PA SP R+
Sbjct: 21 LPSFTRLPESSTVLPHPCPA-LLPPILLSLSPPLSPLPPAPHSRPFPAFQGYSPRRRVFP 79

Query: 278 TPLIAFTVRILPQSFSQNYLNVATSHQ 198
++ R PQS + ++A ++Q
Sbjct: 80 PTVLPLYPRSFPQSPEEPDHHLAATNQ 106


>tr|A9S9Z6|A9S9Z6_PHYPA Predicted protein OS=Physcomitrella patens
subsp. patens GN=PHYPADRAFT_163695 PE=4 SV=1
Length = 824

Score = 35.8 bits (81), Expect = 2.5
Identities = 25/68 (36%), Positives = 31/68 (45%), Gaps = 7/68 (10%)
Frame = -1

Query: 386 PASLSQPAPGLSPLPPIRHLWRSPAPTQSPHLRLLDTP-LIAFTVRILPQS------FSQ 228
P +L++P P H RSP P SP R LD P I+F R+ P S FS
Sbjct: 510 PTNLNRPLTSTRAAPDTHHQSRSPLPPPSPQTRPLDLPRAISFNSRLHPGSGGHVSNFSL 569

Query: 227 NYLNVATS 204
+ N A S
Sbjct: 570 DSKNAARS 577


>tr|B0L5P4|B0L5P4_CALMS COUP-TF/Svp nuclear hormone receptor
OS=Callosobruchus maculatus GN=Svp PE=2 SV=1
Length = 419

Score = 35.8 bits (81), Expect = 2.5
Identities = 25/66 (37%), Positives = 33/66 (50%)
Frame = -1

Query: 395 NVLPASLSQPAPGLSPLPPIRHLWRSPAPTQSPHLRLLDTPLIAFTVRILPQSFSQNYLN 216
N +P SL+ GL+PLPP +L +P PT + L+TP I R P SQN N
Sbjct: 15 NPIPTSLNSLPNGLNPLPPAGNL--NPLPTNINPI-TLETPDIGLINRQTPSQNSQNSAN 71

Query: 215 VATSHQ 198
+Q
Sbjct: 72 SNDKNQ 77


>tr|B5LVY9|B5LVY9_SACKO Runt protein OS=Saccoglossus kowalevskii
GN=runt PE=2 SV=1
Length = 490

Score = 35.4 bits (80), Expect = 3.3
Identities = 28/94 (29%), Positives = 43/94 (45%), Gaps = 15/94 (15%)
Frame = -1

Query: 464 SALIPSYTIRSSADLFLNRP*PNNVLPASLSQP-----APGLSPLPPIR---HLWRSPAP 309
SA IP + +L P P++V P S S P +P +S PP + HL+ +PAP
Sbjct: 350 SATIPILSPGIDTSRYLPLPSPHDVYPTSPSTPVTLPASPYISGSPPYQLYAHLYSTPAP 409

Query: 308 TQ-------SPHLRLLDTPLIAFTVRILPQSFSQ 228
+PHL +L T ++ + + SQ
Sbjct: 410 ASHPPYYEGTPHLSMLPTTTVSSRISTMIGRSSQ 443


>tr|Q0JKB9|Q0JKB9_ORYSJ Os01g0685200 protein OS=Oryza sativa subsp.
japonica GN=Os01g0685200 PE=4 SV=1
Length = 479

Score = 34.7 bits (78), Expect = 5.6
Identities = 22/58 (37%), Positives = 25/58 (43%), Gaps = 6/58 (10%)
Frame = -1

Query: 479 GRACWSALIPSYTIRSSADLFL------NRP*PNNVLPASLSQPAPGLSPLPPIRHLW 324
GRA WS P IRS A L L + P P + P P P PP+R LW
Sbjct: 31 GRAAWSRRRPPLPIRSRARLPLPPLSPADAASPQPCSPTDAAAPPPRSLPTPPLRLLW 88


>tr|Q5B8M8|Q5B8M8_EMENI Putative uncharacterized protein
OS=Emericella nidulans GN=AN3102.2 PE=4 SV=1
Length = 2312

Score = 34.7 bits (78), Expect = 5.6
Identities = 18/57 (31%), Positives = 28/57 (49%)
Frame = -1

Query: 446 YTIRSSADLFLNRP*PNNVLPASLSQPAPGLSPLPPIRHLWRSPAPTQSPHLRLLDT 276
+ +R +AD + P + P+S+++ +P PP RH WRS S L L T
Sbjct: 83 FGLRHAADTDASTPLATSSGPSSITRSSPRTDARPPFRHHWRSSLSESSSELSLSRT 139


>tr|A7CYE1|A7CYE1_9BACT Putative uncharacterized protein
OS=Opitutaceae bacterium TAV2 GN=ObacDRAFT_2735 PE=3
SV=1
Length = 280

Score = 34.3 bits (77), Expect = 7.3
Identities = 16/48 (33%), Positives = 26/48 (54%)
Frame = -1

Query: 386 PASLSQPAPGLSPLPPIRHLWRSPAPTQSPHLRLLDTPLIAFTVRILP 243
PA +PAP LPP+ H R+P P ++ L +PL+ + ++P
Sbjct: 41 PARSERPAP--PALPPVPHAIRAPGPPSHKIMKTLRSPLVVVLLGVVP 86


>tr|Q4DSJ8|Q4DSJ8_TRYCR Protein kinase, putative OS=Trypanosoma
cruzi GN=Tc00.1047053508543.20 PE=4 SV=1
Length = 1113

Score = 34.3 bits (77), Expect = 7.3
Identities = 32/124 (25%), Positives = 49/124 (39%), Gaps = 18/124 (14%)
Frame = +3

Query: 198 LMGSGDVQV------VLRERLRKDSNSECDQGCVEQAEMRRLGRSRTTPKMANWRQGTQA 359
+ GS DV+V VL S+S+C +GC G Q
Sbjct: 369 IRGSHDVEVGGNASDVLSNLSIPHSSSKCTEGC----------------------SGEQM 406

Query: 360 RSRL*QRGRKHV---VRLRAVEEQVSARANGVTGNKC---------GPAGSAMLHTQ*CH 503
+ +HV RLR++E+++ + G G++C GP +A+LHT H
Sbjct: 407 STETWDTRTRHVQLEARLRSLEKRLEQQLRGSVGHRCDTKALTASQGPEPAAVLHTSESH 466

Query: 504 PTCF 515
P F
Sbjct: 467 PQEF 470