DK955358
Clone id TST39A01NGRL0022_O05
Library
Length 323
Definition Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0022_O05. 5' end sequence.
Accession
Tissue type prothallia with plantlets
Developmental stage gametophytes with sporophytes
Contig ID -
Sequence
GAAAAGGTTTGGAATGAGGTGTTTTACTTCCTCGCCCAGAAAGGAATGTTTGTGAAGGGC
TATGTTTACTAAAGCTGATTACCAGGCATCAGACTGGCCGCCTTTTTACACCTCGGAGAG
TCGAGAAGAACGGGTTTTGTTTTGTTTTGTTTTTGAAGGTGACTTACCCTTGCAAAAAGG
TGATGAACTAGTTTGCCTGATTGACAGGCAATGCATGTATGCATTTTAAGTTAATAAACA
ATCACAGTAATGTAAATGTCCATTTTTGCACCAAAAAAAAAAAAAAAAAAAAAAAAAAAA
AAAAAAAAAAAAAAAAAAAAAAA
■■Homology search results ■■ -
sp_hit_id Q9ZU52
Definition sp|Q9ZU52|ALFC3_ARATH Probable fructose-bisphosphate aldolase 3, chloroplastic OS=Arabidopsis thaliana
Align length 20
Score (bit) 30.4
E-value 2.9
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK955358|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0022_O05, 5'
(272 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q9ZU52|ALFC3_ARATH Probable fructose-bisphosphate aldolase 3,... 30 2.9
sp|Q944G9|ALFC2_ARATH Probable fructose-bisphosphate aldolase 2,... 29 6.4
sp|Q9SJU4|ALFC1_ARATH Probable fructose-bisphosphate aldolase 1,... 29 6.4
sp|P30323|CYCM_BRAJA Cytochrome c homolog OS=Bradyrhizobium japo... 29 8.4
sp|P14779|CPXB_BACME Bifunctional P-450/NADPH-P450 reductase OS=... 29 8.4

>sp|Q9ZU52|ALFC3_ARATH Probable fructose-bisphosphate aldolase 3,
chloroplastic OS=Arabidopsis thaliana GN=FBA3 PE=1 SV=1
Length = 391

Score = 30.4 bits (67), Expect = 2.9
Identities = 11/20 (55%), Positives = 16/20 (80%)
Frame = +1

Query: 1 EKVWNEVFYFLAQKGMFVKG 60
EKVW+EVF++LAQ + +G
Sbjct: 237 EKVWSEVFFYLAQNNVMFEG 256


>sp|Q944G9|ALFC2_ARATH Probable fructose-bisphosphate aldolase 2,
chloroplastic OS=Arabidopsis thaliana GN=FBA2 PE=1 SV=1
Length = 398

Score = 29.3 bits (64), Expect = 6.4
Identities = 11/20 (55%), Positives = 15/20 (75%)
Frame = +1

Query: 1 EKVWNEVFYFLAQKGMFVKG 60
EKVW EVF++LAQ + +G
Sbjct: 244 EKVWAEVFFYLAQNNVMFEG 263


>sp|Q9SJU4|ALFC1_ARATH Probable fructose-bisphosphate aldolase 1,
chloroplastic OS=Arabidopsis thaliana GN=FBA1 PE=1 SV=2
Length = 399

Score = 29.3 bits (64), Expect = 6.4
Identities = 11/20 (55%), Positives = 15/20 (75%)
Frame = +1

Query: 1 EKVWNEVFYFLAQKGMFVKG 60
EKVW EVF++LAQ + +G
Sbjct: 245 EKVWAEVFFYLAQNNVMFEG 264


>sp|P30323|CYCM_BRAJA Cytochrome c homolog OS=Bradyrhizobium
japonicum GN=cycM PE=3 SV=1
Length = 184

Score = 28.9 bits (63), Expect = 8.4
Identities = 12/27 (44%), Positives = 16/27 (59%)
Frame = +3

Query: 57 GLCLLKLITRHQTGRLFTPRRVEKNGF 137
G CL+ L+T LF+P+ EK GF
Sbjct: 15 GTCLILLVTSFTANALFSPKMPEKPGF 41


>sp|P14779|CPXB_BACME Bifunctional P-450/NADPH-P450 reductase
OS=Bacillus megaterium GN=CYP102A1 PE=1 SV=2
Length = 1049

Score = 28.9 bits (63), Expect = 8.4
Identities = 16/38 (42%), Positives = 24/38 (63%), Gaps = 2/38 (5%)
Frame = +2

Query: 95 WP--PFYTSESREERVLFCFVFEGDLPLQKGDELVCLI 202
WP P ++ ++E+ VL G+ PL+KGDEL+ LI
Sbjct: 326 WPTAPAFSLYAKEDTVL-----GGEYPLEKGDELMVLI 358


tr_hit_id -
Definition No hits.
Align length -
Score (bit) -
E-value -
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK955358|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0022_O05, 5'
(272 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done

***** No hits found ******