DK955360
Clone id TST39A01NGRL0022_O07
Library
Length 535
Definition Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0022_O07. 5' end sequence.
Accession
Tissue type prothallia with plantlets
Developmental stage gametophytes with sporophytes
Contig ID -
Sequence
GAAAATCAATTTGGTTGGGAGTCAGAGGCAGGCTCGCGTCCGCAGGGTAACTCGCTGCGT
CTTCCTCTTCAACTTCCCTTCTCTACACCCACCCCCTCCTCCGCAAGTTGGGCCCTTCCT
TGCCGTCGATCTGGGTTTATTTCCCAATTCCAAGTTCATCCACCCTCCCAATTCCAAGTT
CTTCCTCGCCGCTCATCCCCGCAGGCTACTCTCCATCTGCATGCCCATGTCCCTTCTCGT
TGTATGGTTACAGGCCAGCAATGCGCTCATAACAGCGTTTATCGATGTTGCCCGAAGAAG
TGATTTGCGAGTCAATAGGAGCTTATGGATGATGAACGAATAATCGATGCCATACATGTA
TTGAACGATGCAATTAGAGCTTTCCACCACAGCTCCCCTCAGTAGATGAACCTACCCTAT
TACCTTATCGGGCACATAATGCAAACACGGGAATAGCTACACAGGCCCCACCATGGACCA
GGAAGGTTCAGTTGGTGTTCAGGTTCCTTCAGTAACAGGTCGGAAAGGTGAACTG
■■Homology search results ■■ -
sp_hit_id Q7TQ32
Definition sp|Q7TQ32|RGMC_MOUSE Hemojuvelin OS=Mus musculus
Align length 51
Score (bit) 31.2
E-value 3.3
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK955360|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0022_O07, 5'
(535 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q7TQ32|RGMC_MOUSE Hemojuvelin OS=Mus musculus GN=Hfe2 PE=2 SV=1 31 3.3
sp|P13847|HBSAG_HHBV Large envelope protein OS=Heron hepatitis B... 31 3.3
sp|P25054|APC_HUMAN Adenomatous polyposis coli protein OS=Homo s... 31 4.3
sp|Q8TEQ6|GEMI5_HUMAN Gem-associated protein 5 OS=Homo sapiens G... 30 5.6
sp|P49606|CYAA_USTMA Adenylate cyclase OS=Ustilago maydis GN=UAC... 30 5.7
sp|Q8H2X8|SHR1_ORYSJ Protein SHORT-ROOT 1 OS=Oryza sativa subsp.... 30 7.4
sp|A2YN56|SHR1_ORYSI Protein SHORT-ROOT 1 OS=Oryza sativa subsp.... 30 7.4
sp|Q8N7M5|RGMC_RAT Hemojuvelin OS=Rattus norvegicus GN=Hfe2 PE=2... 30 7.4
sp|Q6ZVN8|RGMC_HUMAN Hemojuvelin OS=Homo sapiens GN=HFE2 PE=1 SV=1 30 7.4
sp|Q5R724|FA48A_PONAB Protein FAM48A OS=Pongo abelii GN=FAM48A P... 30 9.7
sp|Q8NEM7|FA48A_HUMAN Protein FAM48A OS=Homo sapiens GN=FAM48A P... 30 9.7
sp|Q5T0Z8|CF132_HUMAN Uncharacterized protein C6orf132 OS=Homo s... 30 9.7

>sp|Q7TQ32|RGMC_MOUSE Hemojuvelin OS=Mus musculus GN=Hfe2 PE=2 SV=1
Length = 420

Score = 31.2 bits (69), Expect = 3.3
Identities = 17/51 (33%), Positives = 23/51 (45%)
Frame = -1

Query: 481 LVHGGACVAIPVFALCAR*GNRVGSSTEGSCGGKL*LHRSIHVWHRLFVHH 329
L GG C A+ +ALC R T +C G L H ++H L + H
Sbjct: 67 LASGGLCRALRSYALCTR-------RTARTCRGDLAFHSAVHGIEDLMIQH 110


>sp|P13847|HBSAG_HHBV Large envelope protein OS=Heron hepatitis B
virus GN=S PE=3 SV=1
Length = 335

Score = 31.2 bits (69), Expect = 3.3
Identities = 20/74 (27%), Positives = 32/74 (43%)
Frame = +1

Query: 31 GSRPQGNSLRLPLQLPFSTPTPSSASWALPCRRSGFISQFQVHPPSQFQVLPRRSSPQAT 210
G P+G + RL L P TP P + + + F Q+Q + P P ++P
Sbjct: 66 GHWPEGTARRLGLDQPRPTPPPITWTEEEDKKAKEFFKQYQENRPK-----PAETAPPPI 120

Query: 211 LHLHAHVPSRCMVT 252
LHA P + ++
Sbjct: 121 TELHAAEPPQWKIS 134


>sp|P25054|APC_HUMAN Adenomatous polyposis coli protein OS=Homo
sapiens GN=APC PE=1 SV=2
Length = 2843

Score = 30.8 bits (68), Expect = 4.3
Identities = 22/68 (32%), Positives = 33/68 (48%), Gaps = 2/68 (2%)
Frame = +1

Query: 4 NQFGWESEAGSRP--QGNSLRLPLQLPFSTPTPSSASWALPCRRSGFISQFQVHPPSQFQ 177
+Q G S+A SR + ++ P Q P S P S ++ R+G + PP++
Sbjct: 2290 SQIGGSSKAPSRSGSRDSTPSRPAQQPLSRPIQSPGRNSISPGRNG------ISPPNKLS 2343

Query: 178 VLPRRSSP 201
LPR SSP
Sbjct: 2344 QLPRTSSP 2351


>sp|Q8TEQ6|GEMI5_HUMAN Gem-associated protein 5 OS=Homo sapiens
GN=GEMIN5 PE=1 SV=2
Length = 1508

Score = 30.4 bits (67), Expect = 5.6
Identities = 13/30 (43%), Positives = 17/30 (56%)
Frame = -3

Query: 101 EEGVGVEKGS*RGRRSELPCGREPASDSQP 12
E GV ++G + R ELPCG PA +P
Sbjct: 774 ENGVSDQEGEEQAREPELPCGLAPAVSREP 803


>sp|P49606|CYAA_USTMA Adenylate cyclase OS=Ustilago maydis GN=UAC1
PE=3 SV=1
Length = 2493

Score = 30.4 bits (67), Expect = 5.7
Identities = 27/64 (42%), Positives = 31/64 (48%)
Frame = +1

Query: 22 SEAGSRPQGNSLRLPLQLPFSTPTPSSASWALPCRRSGFISQFQVHPPSQFQVLPRRSSP 201
SEA P G SLR P + ST T SSAS L R PSQ +LPR S P
Sbjct: 525 SEASLAPSG-SLRTPSRTTASTST-SSASTVLSDRL-----------PSQVNMLPRNSVP 571

Query: 202 QATL 213
+ +L
Sbjct: 572 RLSL 575


>sp|Q8H2X8|SHR1_ORYSJ Protein SHORT-ROOT 1 OS=Oryza sativa subsp.
japonica GN=SHR1 PE=1 SV=2
Length = 602

Score = 30.0 bits (66), Expect = 7.4
Identities = 14/34 (41%), Positives = 19/34 (55%)
Frame = +2

Query: 254 ASNALITAFIDVARRSDLRVNRSLWMMNE*SMPY 355
AS L+ VA R RV + +WM+NE + PY
Sbjct: 192 ASQLLLECARSVAARDSQRVQQLMWMLNELASPY 225


>sp|A2YN56|SHR1_ORYSI Protein SHORT-ROOT 1 OS=Oryza sativa subsp.
indica GN=SHR1 PE=3 SV=1
Length = 602

Score = 30.0 bits (66), Expect = 7.4
Identities = 14/34 (41%), Positives = 19/34 (55%)
Frame = +2

Query: 254 ASNALITAFIDVARRSDLRVNRSLWMMNE*SMPY 355
AS L+ VA R RV + +WM+NE + PY
Sbjct: 192 ASQLLLECARSVAARDSQRVQQLMWMLNELASPY 225


>sp|Q8N7M5|RGMC_RAT Hemojuvelin OS=Rattus norvegicus GN=Hfe2 PE=2
SV=1
Length = 422

Score = 30.0 bits (66), Expect = 7.4
Identities = 16/48 (33%), Positives = 22/48 (45%)
Frame = -1

Query: 472 GGACVAIPVFALCAR*GNRVGSSTEGSCGGKL*LHRSIHVWHRLFVHH 329
GG C A+ +ALC R T +C G L H ++H L + H
Sbjct: 73 GGLCRALRSYALCTR-------RTARTCRGDLAFHSAVHGIEDLMIQH 113


>sp|Q6ZVN8|RGMC_HUMAN Hemojuvelin OS=Homo sapiens GN=HFE2 PE=1 SV=1
Length = 426

Score = 30.0 bits (66), Expect = 7.4
Identities = 16/48 (33%), Positives = 22/48 (45%)
Frame = -1

Query: 472 GGACVAIPVFALCAR*GNRVGSSTEGSCGGKL*LHRSIHVWHRLFVHH 329
GG C A+ +ALC R T +C G L H ++H L + H
Sbjct: 77 GGLCRALRSYALCTR-------RTARTCRGDLAFHSAVHGIEDLMIQH 117


>sp|Q5R724|FA48A_PONAB Protein FAM48A OS=Pongo abelii GN=FAM48A PE=2
SV=1
Length = 522

Score = 29.6 bits (65), Expect = 9.7
Identities = 15/45 (33%), Positives = 25/45 (55%)
Frame = +1

Query: 64 PLQLPFSTPTPSSASWALPCRRSGFISQFQVHPPSQFQVLPRRSS 198
P++LP S+ SS ++ P + S F+ P S+ +PR+SS
Sbjct: 453 PIKLPSSSGNSSSGNYFSPQQTSSFLKSPTPPPSSKPPTIPRKSS 497


tr_hit_id Q2H696
Definition tr|Q2H696|Q2H696_CHAGB Putative uncharacterized protein OS=Chaetomium globosum
Align length 62
Score (bit) 35.4
E-value 1.9
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK955360|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0022_O07, 5'
(535 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|Q2H696|Q2H696_CHAGB Putative uncharacterized protein OS=Chaet... 35 1.9
tr|B5SLL3|B5SLL3_RALSO Aliphatic sulfonates transmembrane protei... 34 4.2
tr|B5S071|B5S071_RALSO Aliphatic sulfonates transmembrane protei... 34 4.2
tr|A3RX20|A3RX20_RALSO Alkanesulfonates transport system permeas... 34 4.2
tr|B7Q9I5|B7Q9I5_IXOSC Putative uncharacterized protein (Fragmen... 34 5.5
tr|Q6R014|Q6R014_HHBV Large envelope protein OS=Heron hepatitis ... 33 7.2
tr|Q2JEI1|Q2JEI1_FRASC Beta-ketoacyl synthase OS=Frankia sp. (st... 33 7.2
tr|Q4SH20|Q4SH20_TETNG Chromosome 8 SCAF14587, whole genome shot... 33 9.3

>tr|Q2H696|Q2H696_CHAGB Putative uncharacterized protein
OS=Chaetomium globosum GN=CHGG_05819 PE=4 SV=1
Length = 666

Score = 35.4 bits (80), Expect = 1.9
Identities = 22/62 (35%), Positives = 29/62 (46%)
Frame = +1

Query: 25 EAGSRPQGNSLRLPLQLPFSTPTPSSASWALPCRRSGFISQFQVHPPSQFQVLPRRSSPQ 204
EAG RP + L PF+ P P S +P ++ Q Q H PS F L SP+
Sbjct: 428 EAGPRPPARNPYNILPTPFTKPLPKFPSLHIPTMQTHKPEQQQHHQPSTFLTLLPTPSPK 487

Query: 205 AT 210
A+
Sbjct: 488 AS 489


>tr|B5SLL3|B5SLL3_RALSO Aliphatic sulfonates transmembrane protein
OS=Ralstonia solanacearum IPO1609 GN=ssuC PE=4 SV=1
Length = 268

Score = 34.3 bits (77), Expect = 4.2
Identities = 23/59 (38%), Positives = 34/59 (57%), Gaps = 7/59 (11%)
Frame = +2

Query: 173 SKFFLAAHPRRLLSICMPMSLLVVWLQA------SNALITAFIDVARRS-DLRVNRSLW 328
SK FL A RRL+ +P++LLV W + SN ++ A +DVAR + +L + LW
Sbjct: 9 SKTFLNAAGRRLVPWLVPLALLVAWQASAQWGWLSNRILPAPLDVARSAVELARSGELW 67


>tr|B5S071|B5S071_RALSO Aliphatic sulfonates transmembrane protein
OS=Ralstonia solanacearum GN=ssuC PE=4 SV=1
Length = 266

Score = 34.3 bits (77), Expect = 4.2
Identities = 23/59 (38%), Positives = 34/59 (57%), Gaps = 7/59 (11%)
Frame = +2

Query: 173 SKFFLAAHPRRLLSICMPMSLLVVWLQA------SNALITAFIDVARRS-DLRVNRSLW 328
SK FL A RRL+ +P++LLV W + SN ++ A +DVAR + +L + LW
Sbjct: 7 SKTFLNAAGRRLVPWLVPLALLVAWQASAQWGWLSNRILPAPLDVARSAIELARSGELW 65


>tr|A3RX20|A3RX20_RALSO Alkanesulfonates transport system permease
protein OS=Ralstonia solanacearum UW551 GN=RRSL_01545
PE=3 SV=1
Length = 268

Score = 34.3 bits (77), Expect = 4.2
Identities = 23/59 (38%), Positives = 34/59 (57%), Gaps = 7/59 (11%)
Frame = +2

Query: 173 SKFFLAAHPRRLLSICMPMSLLVVWLQA------SNALITAFIDVARRS-DLRVNRSLW 328
SK FL A RRL+ +P++LLV W + SN ++ A +DVAR + +L + LW
Sbjct: 9 SKTFLNAAGRRLVPWLVPLALLVAWQASAQWGWLSNRILPAPLDVARSAVELARSGELW 67


>tr|B7Q9I5|B7Q9I5_IXOSC Putative uncharacterized protein (Fragment)
OS=Ixodes scapularis GN=IscW_ISCW011446 PE=4 SV=1
Length = 102

Score = 33.9 bits (76), Expect = 5.5
Identities = 30/86 (34%), Positives = 39/86 (45%), Gaps = 1/86 (1%)
Frame = +1

Query: 34 SRPQGNSLRLPLQLPFST-PTPSSASWALPCRRSGFISQFQVHPPSQFQVLPRRSSPQAT 210
SRP L LP ++P S P P + WA P R + + + PP+Q R +P T
Sbjct: 23 SRPSIRRLCLPSRVPPSPRPQPPPSRWAPPPLRCKWCQRPRSSPPTQLARSRSRVAP--T 80

Query: 211 LHLHAHVPSRCMVTGQQCAHNSVYRC 288
H A RC V Q H S +RC
Sbjct: 81 FHWPA---LRCRVATSQPRHPS-FRC 102


>tr|Q6R014|Q6R014_HHBV Large envelope protein OS=Heron hepatitis B
virus PE=4 SV=1
Length = 335

Score = 33.5 bits (75), Expect = 7.2
Identities = 20/74 (27%), Positives = 34/74 (45%)
Frame = +1

Query: 31 GSRPQGNSLRLPLQLPFSTPTPSSASWALPCRRSGFISQFQVHPPSQFQVLPRRSSPQAT 210
G P+G + RL L+ P+ TP P + + + F Q+Q + P P ++P
Sbjct: 66 GHWPEGTARRLGLEQPWPTPPPITWTEEEDKKAKEFFKQYQENRPK-----PAETAPPPI 120

Query: 211 LHLHAHVPSRCMVT 252
LHA P + ++
Sbjct: 121 TELHAAEPPQWKIS 134


>tr|Q2JEI1|Q2JEI1_FRASC Beta-ketoacyl synthase OS=Frankia sp.
(strain CcI3) GN=Francci3_0927 PE=4 SV=1
Length = 1740

Score = 33.5 bits (75), Expect = 7.2
Identities = 14/37 (37%), Positives = 20/37 (54%)
Frame = +1

Query: 76 PFSTPTPSSASWALPCRRSGFISQFQVHPPSQFQVLP 186
P +P AS A CRR GF+ +F P+ F ++P
Sbjct: 95 PGGVGSPGGASDAFYCRRGGFVEEFASFDPAAFGIMP 131


>tr|Q4SH20|Q4SH20_TETNG Chromosome 8 SCAF14587, whole genome shotgun
sequence OS=Tetraodon nigroviridis GN=GSTENG00018364001
PE=4 SV=1
Length = 1409

Score = 33.1 bits (74), Expect = 9.3
Identities = 25/71 (35%), Positives = 33/71 (46%), Gaps = 7/71 (9%)
Frame = +1

Query: 13 GWESEAGSRPQGNSLRLPLQLPFSTPTPSSASWALPCRRSGFISQFQVHPPSQFQ----- 177
G S AG+R +G R T S +W LP R+ G ISQ +HP ++ Q
Sbjct: 960 GGSSPAGARMRGRGNR--------GKTGSRQAWGLP-RQPGSISQLSLHPAAEVQQDSSV 1010

Query: 178 --VLPRRSSPQ 204
LPR +PQ
Sbjct: 1011 MAPLPRVEAPQ 1021