DK955379 |
Clone id |
TST39A01NGRL0022_P02 |
Library |
TST39 |
Length |
572 |
Definition |
Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0022_P02. 5' end sequence. |
Accession |
DK955379 |
Tissue type |
prothallia with plantlets |
Developmental stage |
gametophytes with sporophytes |
Contig ID |
CL3954Contig1 |
Sequence |
TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTAACTAATAACTTGGTAATT TCAAATTCCCAAAAGCATTGCTAGATATAAAATACATACATATTGGTGCTTGCCTTTTTG CCAAGGCTAAAATGGCCGACACCAATGTCCACATGCCATCACCACACATAAGCCCAGATG CTACTGCTGGGATACACACTTCCGCGTTTCTTGGGTTCAATCTTCTCCAAGTATAAACTA TGATACTACCTATGCACATGTCAATGGCGAAGTAAGATCCAATATAAAAAGGCAAAGCCA TAGCCATGGGAATAGGTATAAACTGAGCAACCCTCTTTGGCACCCAGTTGCGAACGACAT TGATAACTATAGCCAACACAAAAAACATAAATGACAATAGAAGGCAATGCCGTGGCAAGG TAGAAAAGCCTTCAACCCCGAGCATTGCCATCTCTCTAAATATGACAGCATAGGGAGCAG GGTACTCTCCGTCTACTTGTCCAATAGGAAAAGCTTTCCAAAACATCCAAAATGTAGCCG GCGGCAACGATGCACCCAATAACTGTACCAAG |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q6R3K6 |
Definition |
sp|Q6R3K6|YSL6_ARATH Probable metal-nicotianamine transporter YSL6 OS=Arabidopsis thaliana |
Align length |
162 |
Score (bit) |
213.0 |
E-value |
5.0e-55 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A9RD08 |
Definition |
tr|A9RD08|A9RD08_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens |
Align length |
162 |
Score (bit) |
214.0 |
E-value |
2.0e-54 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK955379|Adiantum capillus-veneris mRNA, clone: TST39A01NGRL0022_P02, 5' (531 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|A9RD08|A9RD08_PHYPA Predicted protein OS=Physcomitrella paten... 214 2e-54 tr|A7P9X4|A7P9X4_VITVI Chromosome chr14 scaffold_9, whole genome... 210 3e-53 tr|A9RZL7|A9RZL7_PHYPA Predicted protein OS=Physcomitrella paten... 209 7e-53 tr|B6UBR8|B6UBR8_MAIZE Transposon protein OS=Zea mays PE=2 SV=1 207 2e-52 tr|Q01HR0|Q01HR0_ORYSA OSIGBa0153E02-OSIGBa0093I20.15 protein OS... 207 3e-52 tr|B8AS43|B8AS43_ORYSI Putative uncharacterized protein OS=Oryza... 207 3e-52 tr|B4FBI3|B4FBI3_MAIZE Putative uncharacterized protein OS=Zea m... 207 3e-52 tr|A3AVP7|A3AVP7_ORYSJ Putative uncharacterized protein OS=Oryza... 207 3e-52 tr|B4FLT2|B4FLT2_MAIZE Putative uncharacterized protein OS=Zea m... 206 5e-52 tr|A7QEY5|A7QEY5_VITVI Chromosome chr16 scaffold_86, whole genom... 206 8e-52 tr|Q01LD5|Q01LD5_ORYSA OSIGBa0132D06.2 protein OS=Oryza sativa G... 205 1e-51 tr|A2XSU1|A2XSU1_ORYSI Putative uncharacterized protein OS=Oryza... 205 1e-51 tr|A5AFX2|A5AFX2_VITVI Putative uncharacterized protein OS=Vitis... 205 1e-51 tr|A3A9C0|A3A9C0_ORYSJ Putative uncharacterized protein OS=Oryza... 205 1e-51 tr|A2X7J5|A2X7J5_ORYSI Putative uncharacterized protein OS=Oryza... 205 1e-51 tr|A7QEM4|A7QEM4_VITVI Chromosome chr17 scaffold_85, whole genom... 204 2e-51 tr|A7P2W9|A7P2W9_VITVI Chromosome chr1 scaffold_5, whole genome ... 203 4e-51 tr|A5BJV2|A5BJV2_VITVI Putative uncharacterized protein OS=Vitis... 203 4e-51 tr|Q2XPY5|Q2XPY5_THLCA YSL transporter 1 OS=Thlaspi caerulescens... 203 5e-51 tr|A3KC70|A3KC70_TOBAC Putative yellow stripe-like protein OS=Ni... 201 1e-50 tr|Q01LD4|Q01LD4_ORYSA OSIGBa0132D06.3 protein OS=Oryza sativa G... 200 4e-50 tr|B8AT85|B8AT85_ORYSI Putative uncharacterized protein OS=Oryza... 200 4e-50 tr|A7QEM2|A7QEM2_VITVI Chromosome chr17 scaffold_85, whole genom... 199 7e-50 tr|B4FV59|B4FV59_MAIZE Putative uncharacterized protein OS=Zea m... 198 1e-49 tr|A7QEK4|A7QEK4_VITVI Chromosome chr17 scaffold_85, whole genom... 197 3e-49 tr|A2XW13|A2XW13_ORYSI Putative uncharacterized protein OS=Oryza... 196 5e-49 tr|A7P2W8|A7P2W8_VITVI Chromosome chr1 scaffold_5, whole genome ... 195 1e-48 tr|A5C5N0|A5C5N0_VITVI Putative uncharacterized protein OS=Vitis... 195 1e-48 tr|A7QJ68|A7QJ68_VITVI Chromosome chr2 scaffold_105, whole genom... 195 1e-48 tr|A5C334|A5C334_VITVI Putative uncharacterized protein OS=Vitis... 195 1e-48
>tr|A9RD08|A9RD08_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_111567 PE=4 SV=1 Length = 667
Score = 214 bits (545), Expect = 2e-54 Identities = 93/162 (57%), Positives = 129/162 (79%) Frame = -2
Query: 521 LLGASLPPATFWMFWKAFPIGQVDGEYPAPYAVIFREMAMLGVEGFSTLPRHCLLLSFMF 342 L+G L P+TFW+F+KA+ IG DG Y APYAV++R MA++GVEGFS LP HCL + + Sbjct: 498 LMGCVLAPSTFWLFYKAYSIGDPDGVYKAPYAVVYRSMALIGVEGFSALPSHCLEICYCL 557
Query: 341 FVLAIVINVVRNWVPKRVAQFIPIPMAMALPFYIGSYFAIDMCIGSIIVYTWRRLNPRNA 162 FV A++IN++R+++P+R+ QF+PIPMAMA+PFYIG YFAIDM IGS+I + + ++N A Sbjct: 558 FVAAVLINLLRDFLPRRIGQFVPIPMAMAIPFYIGGYFAIDMFIGSVIRFVYEKVNKAKA 617
Query: 161 EVCIPAVASGLMCGDGMWTLVSAILALAKRQAPICMYFISSN 36 ++ PA+A+GL+CGDG+WT+ S+ILAL K PICMYF SS+ Sbjct: 618 DIITPAIAAGLICGDGVWTIPSSILALTKVNPPICMYFYSSS 659
>tr|A7P9X4|A7P9X4_VITVI Chromosome chr14 scaffold_9, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00037887001 PE=4 SV=1 Length = 493
Score = 210 bits (535), Expect = 3e-53 Identities = 95/157 (60%), Positives = 123/157 (78%) Frame = -2
Query: 518 LGASLPPATFWMFWKAFPIGQVDGEYPAPYAVIFREMAMLGVEGFSTLPRHCLLLSFMFF 339 +G + P TFW+FW AF IG DG Y APYAVIFREMA+LGVEGFS LP+HCL + FF Sbjct: 331 MGCVIAPLTFWLFWTAFDIGSPDGPYKAPYAVIFREMAILGVEGFSELPKHCLAICCGFF 390
Query: 338 VLAIVINVVRNWVPKRVAQFIPIPMAMALPFYIGSYFAIDMCIGSIIVYTWRRLNPRNAE 159 V A+VIN++R+ P +V+QFIPIPMAMA+PFYIG+YFAIDM +G++I++ W R+N + AE Sbjct: 391 VAALVINLLRDVTPAKVSQFIPIPMAMAVPFYIGAYFAIDMFVGTVILFVWERMNRKGAE 450
Query: 158 VCIPAVASGLMCGDGMWTLVSAILALAKRQAPICMYF 48 AVASGL+CGDG+WT+ SA L++ + P+CMYF Sbjct: 451 DFAGAVASGLICGDGIWTIPSASLSIFRINPPVCMYF 487
>tr|A9RZL7|A9RZL7_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_122023 PE=4 SV=1 Length = 661
Score = 209 bits (532), Expect = 7e-53 Identities = 89/157 (56%), Positives = 125/157 (79%) Frame = -2
Query: 518 LGASLPPATFWMFWKAFPIGQVDGEYPAPYAVIFREMAMLGVEGFSTLPRHCLLLSFMFF 339 +G L P TFW+FW AFPIG DG Y APYA+++R MA++GVEGFS LP HCL + ++ F Sbjct: 493 MGCVLAPLTFWLFWTAFPIGDPDGLYKAPYAIVYRSMALIGVEGFSALPGHCLEICYVMF 552
Query: 338 VLAIVINVVRNWVPKRVAQFIPIPMAMALPFYIGSYFAIDMCIGSIIVYTWRRLNPRNAE 159 A+VIN++R+ +PKR++++IPIPMAMA+PFYIG YFAIDM +GSII + + +++ ++ Sbjct: 553 AAAVVINILRDTLPKRISKWIPIPMAMAIPFYIGGYFAIDMFVGSIIRFVYEKIDKPKSD 612
Query: 158 VCIPAVASGLMCGDGMWTLVSAILALAKRQAPICMYF 48 + PA+A+GL+CGDG+WT+ SAILAL+K P+CMYF Sbjct: 613 IMTPAIAAGLICGDGVWTIPSAILALSKINPPLCMYF 649
>tr|B6UBR8|B6UBR8_MAIZE Transposon protein OS=Zea mays PE=2 SV=1 Length = 716
Score = 207 bits (528), Expect = 2e-52 Identities = 98/172 (56%), Positives = 132/172 (76%), Gaps = 1/172 (0%) Frame = -2
Query: 518 LGASLPPATFWMFWKAF-PIGQVDGEYPAPYAVIFREMAMLGVEGFSTLPRHCLLLSFMF 342 +G + P FW+F+KAF IG+ EYPAPYA+++R MA+LGV+GF +LP++CL+L ++F Sbjct: 543 MGCVIGPCIFWLFYKAFGDIGESGTEYPAPYAIVYRNMAILGVDGFGSLPKNCLILCYIF 602
Query: 341 FVLAIVINVVRNWVPKRVAQFIPIPMAMALPFYIGSYFAIDMCIGSIIVYTWRRLNPRNA 162 F AI IN+VR+ P +V++FIP+PMAMA+PFYIGSYFAIDM +GS I++ W RLN A Sbjct: 603 FAAAITINLVRDLTPYKVSRFIPLPMAMAIPFYIGSYFAIDMFLGSAILFVWERLNKAKA 662
Query: 161 EVCIPAVASGLMCGDGMWTLVSAILALAKRQAPICMYFISSNAFGNLKLPSY 6 + PAVASGL+CGDG+WTL +ILALAK Q PICM F+S + N K+ S+ Sbjct: 663 DAFGPAVASGLICGDGIWTLPQSILALAKVQPPICMKFLSRST--NAKVDSF 712
>tr|Q01HR0|Q01HR0_ORYSA OSIGBa0153E02-OSIGBa0093I20.15 protein OS=Oryza sativa GN=OSIGBa0153E02-OSIGBa0093I20.15 PE=4 SV=1 Length = 717
Score = 207 bits (527), Expect = 3e-52 Identities = 95/160 (59%), Positives = 124/160 (77%), Gaps = 1/160 (0%) Frame = -2
Query: 518 LGASLPPATFWMFWKAFP-IGQVDGEYPAPYAVIFREMAMLGVEGFSTLPRHCLLLSFMF 342 +G + P FW+F+KAF IG EYPAPYA+++R MA+LGV+GFS+LP+HCL L ++F Sbjct: 545 MGCVIAPCVFWLFYKAFADIGVSGTEYPAPYAIVYRNMAILGVDGFSSLPKHCLTLCYIF 604
Query: 341 FVLAIVINVVRNWVPKRVAQFIPIPMAMALPFYIGSYFAIDMCIGSIIVYTWRRLNPRNA 162 F AI IN+ R+ P +VA+FIP+PMAMA+PFYIGSYFAIDM IG++I++ W +N A Sbjct: 605 FAAAIAINLARDLAPSKVARFIPLPMAMAIPFYIGSYFAIDMFIGTVILFVWEMVNKAKA 664
Query: 161 EVCIPAVASGLMCGDGMWTLVSAILALAKRQAPICMYFIS 42 E PAVASGL+CGDG+WTL +ILALAK + PICM F+S Sbjct: 665 EAFAPAVASGLICGDGIWTLPQSILALAKVKPPICMKFLS 704
>tr|B8AS43|B8AS43_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_16700 PE=4 SV=1 Length = 576
Score = 207 bits (527), Expect = 3e-52 Identities = 95/160 (59%), Positives = 124/160 (77%), Gaps = 1/160 (0%) Frame = -2
Query: 518 LGASLPPATFWMFWKAFP-IGQVDGEYPAPYAVIFREMAMLGVEGFSTLPRHCLLLSFMF 342 +G + P FW+F+KAF IG EYPAPYA+++R MA+LGV+GFS+LP+HCL L ++F Sbjct: 404 MGCVIAPCVFWLFYKAFADIGVSGTEYPAPYAIVYRNMAILGVDGFSSLPKHCLTLCYIF 463
Query: 341 FVLAIVINVVRNWVPKRVAQFIPIPMAMALPFYIGSYFAIDMCIGSIIVYTWRRLNPRNA 162 F AI IN+ R+ P +VA+FIP+PMAMA+PFYIGSYFAIDM IG++I++ W +N A Sbjct: 464 FAAAIAINLARDLAPSKVARFIPLPMAMAIPFYIGSYFAIDMFIGTVILFVWEMVNKAKA 523
Query: 161 EVCIPAVASGLMCGDGMWTLVSAILALAKRQAPICMYFIS 42 E PAVASGL+CGDG+WTL +ILALAK + PICM F+S Sbjct: 524 EAFAPAVASGLICGDGIWTLPQSILALAKVKPPICMKFLS 563
>tr|B4FBI3|B4FBI3_MAIZE Putative uncharacterized protein OS=Zea mays PE=2 SV=1 Length = 668
Score = 207 bits (527), Expect = 3e-52 Identities = 91/157 (57%), Positives = 123/157 (78%) Frame = -2
Query: 518 LGASLPPATFWMFWKAFPIGQVDGEYPAPYAVIFREMAMLGVEGFSTLPRHCLLLSFMFF 339 LG + P TFW++W AF IG DG + APYAVIFREM++LGVEGFS LP+HCL + FF Sbjct: 506 LGCVIAPLTFWLYWSAFDIGNPDGAFKAPYAVIFREMSILGVEGFSALPQHCLAICSFFF 565
Query: 338 VLAIVINVVRNWVPKRVAQFIPIPMAMALPFYIGSYFAIDMCIGSIIVYTWRRLNPRNAE 159 + ++VIN++R+ PK V++FIPIPMAMA+PFYIG+YFAIDM +G++I++ W R+N + + Sbjct: 566 IASLVINLLRDVTPKNVSRFIPIPMAMAIPFYIGAYFAIDMFVGTVILFVWERVNRKECD 625
Query: 158 VCIPAVASGLMCGDGMWTLVSAILALAKRQAPICMYF 48 AVASGL+CGDG+WT+ SAIL++ + PICMYF Sbjct: 626 DFAGAVASGLICGDGIWTVPSAILSILRIDPPICMYF 662
>tr|A3AVP7|A3AVP7_ORYSJ Putative uncharacterized protein OS=Oryza sativa subsp. japonica GN=OsJ_014869 PE=4 SV=1 Length = 642
Score = 207 bits (527), Expect = 3e-52 Identities = 95/160 (59%), Positives = 124/160 (77%), Gaps = 1/160 (0%) Frame = -2
Query: 518 LGASLPPATFWMFWKAFP-IGQVDGEYPAPYAVIFREMAMLGVEGFSTLPRHCLLLSFMF 342 +G + P FW+F+KAF IG EYPAPYA+++R MA+LGV+GFS+LP+HCL L ++F Sbjct: 470 MGCVIAPCVFWLFYKAFADIGVSGTEYPAPYAIVYRNMAILGVDGFSSLPKHCLTLCYIF 529
Query: 341 FVLAIVINVVRNWVPKRVAQFIPIPMAMALPFYIGSYFAIDMCIGSIIVYTWRRLNPRNA 162 F AI IN+ R+ P +VA+FIP+PMAMA+PFYIGSYFAIDM IG++I++ W +N A Sbjct: 530 FAAAIAINLARDLAPSKVARFIPLPMAMAIPFYIGSYFAIDMFIGTVILFVWEMVNKAKA 589
Query: 161 EVCIPAVASGLMCGDGMWTLVSAILALAKRQAPICMYFIS 42 E PAVASGL+CGDG+WTL +ILALAK + PICM F+S Sbjct: 590 EAFAPAVASGLICGDGIWTLPQSILALAKVKPPICMKFLS 629
>tr|B4FLT2|B4FLT2_MAIZE Putative uncharacterized protein OS=Zea mays PE=2 SV=1 Length = 174
Score = 206 bits (525), Expect = 5e-52 Identities = 98/172 (56%), Positives = 131/172 (76%), Gaps = 1/172 (0%) Frame = -2
Query: 518 LGASLPPATFWMFWKAF-PIGQVDGEYPAPYAVIFREMAMLGVEGFSTLPRHCLLLSFMF 342 +G + P FW+F+KAF IG+ EYPAPYA+++R MA+LGV+GF +LP++CL L ++F Sbjct: 1 MGCVIGPCIFWLFYKAFGDIGESGTEYPAPYAIVYRNMAILGVDGFGSLPKNCLTLCYIF 60
Query: 341 FVLAIVINVVRNWVPKRVAQFIPIPMAMALPFYIGSYFAIDMCIGSIIVYTWRRLNPRNA 162 F AI IN+VR+ P +V++FIP+PMAMA+PFYIGSYFAIDM +GS I++ W RLN A Sbjct: 61 FAAAITINLVRDLTPYKVSRFIPLPMAMAIPFYIGSYFAIDMFLGSAILFVWERLNKAKA 120
Query: 161 EVCIPAVASGLMCGDGMWTLVSAILALAKRQAPICMYFISSNAFGNLKLPSY 6 + PAVASGL+CGDG+WTL +ILALAK Q PICM F+S + N K+ S+ Sbjct: 121 DAFGPAVASGLICGDGIWTLPQSILALAKVQPPICMKFLSRST--NAKVDSF 170
>tr|A7QEY5|A7QEY5_VITVI Chromosome chr16 scaffold_86, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00037204001 PE=4 SV=1 Length = 648
Score = 206 bits (523), Expect = 8e-52 Identities = 89/160 (55%), Positives = 125/160 (78%) Frame = -2
Query: 518 LGASLPPATFWMFWKAFPIGQVDGEYPAPYAVIFREMAMLGVEGFSTLPRHCLLLSFMFF 339 +G + P TF++F+KAF +G DGEY APYA+I+R MA+LGVEGFS LP HCL L FF Sbjct: 489 IGCVVAPLTFFLFYKAFDVGNPDGEYKAPYAIIYRNMAILGVEGFSALPHHCLQLCCGFF 548
Query: 338 VLAIVINVVRNWVPKRVAQFIPIPMAMALPFYIGSYFAIDMCIGSIIVYTWRRLNPRNAE 159 + AI N+VR+ P ++ ++IP+PMAMA+PF +G+YFAIDMC+GS++V+ W ++N + A Sbjct: 549 IFAIAANLVRDLSPSKIGKWIPLPMAMAVPFLVGAYFAIDMCMGSLVVFVWHKVNSKKAS 608
Query: 158 VCIPAVASGLMCGDGMWTLVSAILALAKRQAPICMYFISS 39 + +PAVASGL+CGDG+W L S++LALAK PICM F+++ Sbjct: 609 LMVPAVASGLICGDGLWILPSSVLALAKINPPICMSFLAT 648
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