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NBDC - LSDB Archive
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DK955389
Clone id TST39A01NGRL0022_P12
Library
Length 614
Definition Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0022_P12. 5' end sequence.
Accession
Tissue type prothallia with plantlets
Developmental stage gametophytes with sporophytes
Contig ID
Sequence 
ACCTGTTCTACATCCGCCATCGTGCAGCGTATGCGGCAGCAGAATTTCAGCAGCTGCGTC
GCCGCGCCCATTATGCCCACCGGTCCATGGAAATCGTCACCAAGCTCAGGTTCTTGCAAG
GGCGAGTGCAGGAGGGTGGCCCGGTTGTCAAGATCTCTCTTCTTCTCAACATCGCTTTGT
TGCGTCCTCGCCTTTCGGACACTCCAACGCAGTGCTAAGCTCAGATTGGGCTCTTGGTTC
CTCTCCTCTCAGCATTCAAGCCCCATCAGGGTCCGCCCAAAGGCCCCCTGACACTGATGT
CATGGGCCTTCTGCTCCGCCAGCGCATTGTCTTCCTCGGCTTCAACCTGGATGAGTTCGC
TGCGGATGCCATCATCAGCCAGCTTCTGCTTCTTGATGCTCAAGACCCTACTAAGGATAT
CCGCCTCTTCATTAACAGCCCCGGAGGTGCCACCAGTGCTTCCATGGCCGTGTATGATGC
TATTCAGCTGTGTCGTGCCGATATATCTACAATAGCATTCGGTATTGCGGCATCGACTGC
TGCCATAGTGTTAGCAGGTGGAACAAAGGGGAAAAGGTTTGCGATGCCAAACACGAGAAT
TATGCTTCATCAGC
■■Homology search results ■■ -
sp_hit_id Q94B60
Definition sp|Q94B60|CLPP4_ARATH ATP-dependent Clp protease proteolytic subunit 4, chloroplastic OS=Arabidopsis thaliana
Align length 159
Score (bit) 174.0
E-value 3.0e-43
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK955389|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0022_P12, 5'
         (614 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q94B60|CLPP4_ARATH ATP-dependent Clp protease proteolytic sub...   174   3e-43
sp|Q9SXJ6|CLPP3_ARATH ATP-dependent Clp protease proteolytic sub...   144   3e-34
sp|A8F754|CLPP_THELT ATP-dependent Clp protease proteolytic subu...   132   2e-30
sp|Q59993|CLPP2_SYNY3 ATP-dependent Clp protease proteolytic sub...   130   5e-30
sp|Q3ANI8|CLPP1_SYNSC ATP-dependent Clp protease proteolytic sub...   130   7e-30
sp|Q5N1P6|CLPP3_SYNP6 ATP-dependent Clp protease proteolytic sub...   129   9e-30
sp|Q3B0U1|CLPP2_SYNS9 ATP-dependent Clp protease proteolytic sub...   129   9e-30
sp|O34125|CLPP2_SYNE7 ATP-dependent Clp protease proteolytic sub...   129   9e-30
sp|Q317Y6|CLPP4_PROM9 ATP-dependent Clp protease proteolytic sub...   129   1e-29
sp|Q7V992|CLPP1_PROMM ATP-dependent Clp protease proteolytic sub...   129   1e-29
sp|A5IJ91|CLPP_THEP1 ATP-dependent Clp protease proteolytic subu...   129   2e-29
sp|Q9WZF9|CLPP_THEMA ATP-dependent Clp protease proteolytic subu...   129   2e-29
sp|Q8YQX8|CLPP2_ANASP ATP-dependent Clp protease proteolytic sub...   128   2e-29
sp|Q46ID4|CLPP3_PROMT ATP-dependent Clp protease proteolytic sub...   128   3e-29
sp|Q7V9L6|CLPP3_PROMA ATP-dependent Clp protease proteolytic sub...   128   3e-29
sp|Q7UA36|CLPP1_SYNPX ATP-dependent Clp protease proteolytic sub...   127   3e-29
sp|Q2RL31|CLPP_MOOTA ATP-dependent Clp protease proteolytic subu...   127   6e-29
sp|Q0AWF0|CLPP_SYNWW ATP-dependent Clp protease proteolytic subu...   126   8e-29
sp|Q1AVS9|CLPP_RUBXD ATP-dependent Clp protease proteolytic subu...   126   8e-29
sp|Q7UZK7|CLPP3_PROMP ATP-dependent Clp protease proteolytic sub...   126   1e-28
sp|Q3M726|CLPP3_ANAVT ATP-dependent Clp protease proteolytic sub...   126   1e-28
sp|Q5KVD9|CLPP_GEOKA ATP-dependent Clp protease proteolytic subu...   125   1e-28
sp|A4ISQ2|CLPP_GEOTN ATP-dependent Clp protease proteolytic subu...   125   2e-28
sp|Q8DLI2|CLPP1_THEEB ATP-dependent Clp protease proteolytic sub...   125   2e-28
sp|Q9K888|CLPP2_BACHD ATP-dependent Clp protease proteolytic sub...   124   3e-28
sp|Q2JIP1|CLPP2_SYNJB ATP-dependent Clp protease proteolytic sub...   124   4e-28
sp|A4JF05|CLPP_BURVG ATP-dependent Clp protease proteolytic subu...   124   5e-28
sp|Q39FE8|CLPP_BURS3 ATP-dependent Clp protease proteolytic subu...   124   5e-28
sp|Q0BEF6|CLPP_BURCM ATP-dependent Clp protease proteolytic subu...   124   5e-28
sp|A0K847|CLPP_BURCH ATP-dependent Clp protease proteolytic subu...   124   5e-28

>sp|Q94B60|CLPP4_ARATH ATP-dependent Clp protease proteolytic
           subunit 4, chloroplastic OS=Arabidopsis thaliana
           GN=CLPP4 PE=1 SV=1
          Length = 292

 Score =  174 bits (441), Expect = 3e-43
 Identities = 95/159 (59%), Positives = 115/159 (72%), Gaps = 15/159 (9%)
 Frame = +2

Query: 182 ASSPFGHSNAVLSSDWALGSSPLSIQAPSG---------------SAQRPPDTDVMGLLL 316
           +SS F   N +      L S PL   +PS                SA R  ++DVMGLLL
Sbjct: 26  SSSSFPKPNNLYLKPTKLISPPLRTTSPSPLRFANASIEMSQTQESAIRGAESDVMGLLL 85

Query: 317 RQRIVFLGFNLDEFAADAIISQLLLLDAQDPTKDIRLFINSPGGATSASMAVYDAIQLCR 496
           R+RIVFLG ++D+F ADAI+SQLLLLDA+DP KDI+LFINSPGG+ SA+MA+YD +QL R
Sbjct: 86  RERIVFLGSSIDDFVADAIMSQLLLLDAKDPKKDIKLFINSPGGSLSATMAIYDVVQLVR 145

Query: 497 ADISTIAFGIAASTAAIVLAGGTKGKRFAMPNTRIMLHQ 613
           AD+STIA GIAASTA+I+L  GTKGKRFAMPNTRIM+HQ
Sbjct: 146 ADVSTIALGIAASTASIILGAGTKGKRFAMPNTRIMIHQ 184


>sp|Q9SXJ6|CLPP3_ARATH ATP-dependent Clp protease proteolytic
           subunit 3, chloroplastic OS=Arabidopsis thaliana
           GN=CLPP3 PE=1 SV=1
          Length = 309

 Score =  144 bits (364), Expect = 3e-34
 Identities = 72/136 (52%), Positives = 99/136 (72%), Gaps = 3/136 (2%)
 Frame = +2

Query: 215 LSSDWALGSSPLSIQAPSGSAQRPP---DTDVMGLLLRQRIVFLGFNLDEFAADAIISQL 385
           LSS+W + S   SI + + S  R P   + D   +LLRQRIVFLG  +D+  AD +ISQL
Sbjct: 57  LSSNWDVSS--FSIDSVAQSPSRLPSFEELDTTNMLLRQRIVFLGSQVDDMTADLVISQL 114

Query: 386 LLLDAQDPTKDIRLFINSPGGATSASMAVYDAIQLCRADISTIAFGIAASTAAIVLAGGT 565
           LLLDA+D  +DI LFINSPGG+ +A M +YDA++ C+AD+ST+  G+AAS  A +LA G+
Sbjct: 115 LLLDAEDSERDITLFINSPGGSITAGMGIYDAMKQCKADVSTVCLGLAASMGAFLLASGS 174

Query: 566 KGKRFAMPNTRIMLHQ 613
           KGKR+ MPN+++M+HQ
Sbjct: 175 KGKRYCMPNSKVMIHQ 190


>sp|A8F754|CLPP_THELT ATP-dependent Clp protease proteolytic subunit
           OS=Thermotoga lettingae (strain ATCC BAA-301 / DSM 14385
           / TMO) GN=clpP PE=3 SV=1
          Length = 199

 Score =  132 bits (331), Expect = 2e-30
 Identities = 60/106 (56%), Positives = 84/106 (79%)
 Frame = +2

Query: 296 DVMGLLLRQRIVFLGFNLDEFAADAIISQLLLLDAQDPTKDIRLFINSPGGATSASMAVY 475
           D+   LL+ RIVFLG+ +D+  A+ +++QLL L+A+DP KDI+L+INSPGG+ +A +A+Y
Sbjct: 23  DIYSRLLKDRIVFLGYAIDDHVANLVVAQLLFLEAEDPDKDIQLYINSPGGSVTAGLAIY 82

Query: 476 DAIQLCRADISTIAFGIAASTAAIVLAGGTKGKRFAMPNTRIMLHQ 613
           D +Q  ++D+ TI  G AAS AA++LA GTKGKRFA+PN RIMLHQ
Sbjct: 83  DTMQYIKSDVVTICVGQAASMAAVLLASGTKGKRFALPNARIMLHQ 128


>sp|Q59993|CLPP2_SYNY3 ATP-dependent Clp protease proteolytic
           subunit 2 OS=Synechocystis sp. (strain PCC 6803)
           GN=clpP2 PE=3 SV=1
          Length = 226

 Score =  130 bits (327), Expect = 5e-30
 Identities = 67/142 (47%), Positives = 97/142 (68%)
 Frame = +2

Query: 188 SPFGHSNAVLSSDWALGSSPLSIQAPSGSAQRPPDTDVMGLLLRQRIVFLGFNLDEFAAD 367
           SP+    + L  +      P+ ++  SG  +R    D+   LLR+RI+FLG  +D+  AD
Sbjct: 6   SPYRSPLSTLGGNNIQSVVPMVVEQ-SGMGERA--FDIYSRLLRERIIFLGTPVDDQVAD 62

Query: 368 AIISQLLLLDAQDPTKDIRLFINSPGGATSASMAVYDAIQLCRADISTIAFGIAASTAAI 547
           +I++QLL LDA+DP KDI+L+INSPGG+  A +A+YD +Q  R D+ TI FG+AAS  A 
Sbjct: 63  SIVAQLLFLDAEDPEKDIQLYINSPGGSVYAGLAIYDTMQQIRPDVVTICFGLAASMGAF 122

Query: 548 VLAGGTKGKRFAMPNTRIMLHQ 613
           +L+GG KGKR A+P++RIM+HQ
Sbjct: 123 LLSGGCKGKRMALPSSRIMIHQ 144


>sp|Q3ANI8|CLPP1_SYNSC ATP-dependent Clp protease proteolytic
           subunit 1 OS=Synechococcus sp. (strain CC9605) GN=clpP1
           PE=3 SV=2
          Length = 207

 Score =  130 bits (326), Expect = 7e-30
 Identities = 57/106 (53%), Positives = 83/106 (78%)
 Frame = +2

Query: 296 DVMGLLLRQRIVFLGFNLDEFAADAIISQLLLLDAQDPTKDIRLFINSPGGATSASMAVY 475
           D+   LLR+RI+FLG  +D+  ADA+++Q+L L+A+DP KDI+++INSPGG+ +A +A+Y
Sbjct: 24  DIYSRLLRERIIFLGTGVDDAVADALVAQMLFLEAEDPEKDIQIYINSPGGSVTAGLAIY 83

Query: 476 DAIQLCRADISTIAFGIAASTAAIVLAGGTKGKRFAMPNTRIMLHQ 613
           D +Q    D+ TI +G+AAS  A +L+GGTKGKR A+PN RIM+HQ
Sbjct: 84  DTMQQVAPDVVTICYGLAASMGAFLLSGGTKGKRLALPNARIMIHQ 129


>sp|Q5N1P6|CLPP3_SYNP6 ATP-dependent Clp protease proteolytic
           subunit 3 OS=Synechococcus sp. (strain ATCC 27144 / PCC
           6301 / SAUG 1402/1) GN=clpP3 PE=3 SV=1
          Length = 240

 Score =  129 bits (325), Expect = 9e-30
 Identities = 59/106 (55%), Positives = 83/106 (78%)
 Frame = +2

Query: 296 DVMGLLLRQRIVFLGFNLDEFAADAIISQLLLLDAQDPTKDIRLFINSPGGATSASMAVY 475
           D+   LLR+RIVFLG  +D+  AD+I++QLL L+A+DP KDI+L+INSPGG+ +A MA+Y
Sbjct: 53  DIYSRLLRERIVFLGTGVDDAVADSIVAQLLFLEAEDPEKDIQLYINSPGGSVTAGMAIY 112

Query: 476 DAIQLCRADISTIAFGIAASTAAIVLAGGTKGKRFAMPNTRIMLHQ 613
           D +Q    D++TI FG+AAS  A +L+GG +GKR A+P+ RIM+HQ
Sbjct: 113 DTMQQVAPDVATICFGLAASMGAFLLSGGAQGKRMALPSARIMIHQ 158


>sp|Q3B0U1|CLPP2_SYNS9 ATP-dependent Clp protease proteolytic
           subunit 2 OS=Synechococcus sp. (strain CC9902) GN=clpP2
           PE=3 SV=1
          Length = 207

 Score =  129 bits (325), Expect = 9e-30
 Identities = 56/106 (52%), Positives = 83/106 (78%)
 Frame = +2

Query: 296 DVMGLLLRQRIVFLGFNLDEFAADAIISQLLLLDAQDPTKDIRLFINSPGGATSASMAVY 475
           D+   LLR+RI+FLG  +D+  ADA+++Q+L L+A+DP KDI++++NSPGG+ +A +A+Y
Sbjct: 24  DIYSRLLRERIIFLGTGVDDAVADALVAQMLFLEAEDPEKDIQIYVNSPGGSVTAGLAIY 83

Query: 476 DAIQLCRADISTIAFGIAASTAAIVLAGGTKGKRFAMPNTRIMLHQ 613
           D +Q    D+ TI +G+AAS  A +L+GGTKGKR A+PN RIM+HQ
Sbjct: 84  DTMQQVAPDVVTICYGLAASMGAFLLSGGTKGKRLALPNARIMIHQ 129


>sp|O34125|CLPP2_SYNE7 ATP-dependent Clp protease proteolytic
           subunit 2 OS=Synechococcus elongatus (strain PCC 7942)
           GN=clpP2 PE=3 SV=1
          Length = 240

 Score =  129 bits (325), Expect = 9e-30
 Identities = 59/106 (55%), Positives = 83/106 (78%)
 Frame = +2

Query: 296 DVMGLLLRQRIVFLGFNLDEFAADAIISQLLLLDAQDPTKDIRLFINSPGGATSASMAVY 475
           D+   LLR+RIVFLG  +D+  AD+I++QLL L+A+DP KDI+L+INSPGG+ +A MA+Y
Sbjct: 53  DIYSRLLRERIVFLGTGVDDAVADSIVAQLLFLEAEDPEKDIQLYINSPGGSVTAGMAIY 112

Query: 476 DAIQLCRADISTIAFGIAASTAAIVLAGGTKGKRFAMPNTRIMLHQ 613
           D +Q    D++TI FG+AAS  A +L+GG +GKR A+P+ RIM+HQ
Sbjct: 113 DTMQQVAPDVATICFGLAASMGAFLLSGGAQGKRMALPSARIMIHQ 158


>sp|Q317Y6|CLPP4_PROM9 ATP-dependent Clp protease proteolytic
           subunit 4 OS=Prochlorococcus marinus (strain MIT 9312)
           GN=clpP4 PE=3 SV=1
          Length = 219

 Score =  129 bits (324), Expect = 1e-29
 Identities = 62/127 (48%), Positives = 93/127 (73%)
 Frame = +2

Query: 233 LGSSPLSIQAPSGSAQRPPDTDVMGLLLRQRIVFLGFNLDEFAADAIISQLLLLDAQDPT 412
           +G+ P  I+  SG  +R    D+   LLR+RI+FLG  +++  +D++++QLL L+A+DP 
Sbjct: 28  IGAVPTVIEQ-SGRGERA--FDIYSRLLRERIIFLGSGINDQVSDSLVAQLLFLEAEDPE 84

Query: 413 KDIRLFINSPGGATSASMAVYDAIQLCRADISTIAFGIAASTAAIVLAGGTKGKRFAMPN 592
           KDI+++INSPGG+ +A MA+YD +Q    D+ TI FG+AAS  A +L+GG KGKR A+PN
Sbjct: 85  KDIQIYINSPGGSVTAGMAIYDTMQQISPDVVTICFGVAASMGAFLLSGGAKGKRLALPN 144

Query: 593 TRIMLHQ 613
           +RIM+HQ
Sbjct: 145 SRIMIHQ 151


>sp|Q7V992|CLPP1_PROMM ATP-dependent Clp protease proteolytic
           subunit 1 OS=Prochlorococcus marinus (strain MIT 9313)
           GN=clpP1 PE=3 SV=1
          Length = 224

 Score =  129 bits (324), Expect = 1e-29
 Identities = 57/106 (53%), Positives = 82/106 (77%)
 Frame = +2

Query: 296 DVMGLLLRQRIVFLGFNLDEFAADAIISQLLLLDAQDPTKDIRLFINSPGGATSASMAVY 475
           D+   LLR+RI+FLG  +D+  ADA+++Q+L L+A+DP KDI+++INSPGG+ +A +A+Y
Sbjct: 41  DIYSRLLRERIIFLGTGVDDQVADALVAQMLFLEAEDPEKDIQIYINSPGGSVTAGLAIY 100

Query: 476 DAIQLCRADISTIAFGIAASTAAIVLAGGTKGKRFAMPNTRIMLHQ 613
           D +Q    D+ TI +G+AAS  A +L GGTKGKR A+PN RIM+HQ
Sbjct: 101 DTMQQVAPDVVTICYGLAASMGAFLLCGGTKGKRLALPNARIMIHQ 146
tr_hit_id A9NTR6
Definition tr|A9NTR6|A9NTR6_PICSI ATP-dependent Clp protease proteolytic subunit OS=Picea sitchensis
Align length 149
Score (bit) 189.0
E-value 8.0e-47
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK955389|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0022_P12, 5'
         (614 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|A9NTR6|A9NTR6_PICSI ATP-dependent Clp protease proteolytic su...   189   8e-47
tr|A9PA38|A9PA38_POPTR ATP-dependent Clp protease proteolytic su...   180   5e-44
tr|A7PJQ1|A7PJQ1_VITVI ATP-dependent Clp protease proteolytic su...   177   3e-43
tr|A9TZR6|A9TZR6_PHYPA ATP-dependent Clp protease proteolytic su...   171   3e-41
tr|Q9FRM4|Q9FRM4_ORYSA ATP-dependent Clp protease proteolytic su...   166   1e-39
tr|Q7XBR2|Q7XBR2_ORYSJ ATP-dependent Clp protease proteolytic su...   166   1e-39
tr|B4FP39|B4FP39_MAIZE ATP-dependent Clp protease proteolytic su...   162   1e-38
tr|A9RE44|A9RE44_PHYPA ATP-dependent Clp protease proteolytic su...   160   4e-38
tr|A9NTW0|A9NTW0_PICSI ATP-dependent Clp protease proteolytic su...   158   3e-37
tr|A9NRW7|A9NRW7_PICSI ATP-dependent Clp protease proteolytic su...   157   6e-37
tr|Q5QMT1|Q5QMT1_ORYSJ Putative ATP-dependent Clp protease, prot...   155   1e-36
tr|Q0JMF9|Q0JMF9_ORYSJ ATP-dependent Clp protease proteolytic su...   155   1e-36
tr|A2WQJ7|A2WQJ7_ORYSI ATP-dependent Clp protease proteolytic su...   155   1e-36
tr|B7FH45|B7FH45_MEDTR Putative uncharacterized protein OS=Medic...   154   3e-36
tr|A9RYV9|A9RYV9_PHYPA ATP-dependent Clp protease proteolytic su...   154   3e-36
tr|A7PR54|A7PR54_VITVI ATP-dependent Clp protease proteolytic su...   153   7e-36
tr|A9T6I1|A9T6I1_PHYPA ATP-dependent Clp protease proteolytic su...   151   3e-35
tr|B6TBU2|B6TBU2_MAIZE ATP-dependent Clp protease proteolytic su...   149   1e-34
tr|A8IJ60|A8IJ60_CHLRE ATP-dependent Clp protease proteolytic su...   149   2e-34
tr|Q8W4Z1|Q8W4Z1_BRAOL ATP-dependent Clp protease proteolytic su...   148   3e-34
tr|Q9M4F0|Q9M4F0_BRANA ATP-dependent Clp protease proteolytic su...   147   6e-34
tr|Q93YL4|Q93YL4_BRANA ATP-dependent Clp protease proteolytic su...   147   6e-34
tr|Q9ST19|Q9ST19_BRACM ATP-dependent Clp protease proteolytic su...   145   2e-33
tr|Q019I1|Q019I1_OSTTA ATP-dependent Clp protease proteolytic su...   144   5e-33
tr|A4RXD2|A4RXD2_OSTLU ATP-dependent Clp protease proteolytic su...   141   3e-32
tr|Q79CM2|Q79CM2_SYNE7 ATP-dependent Clp protease proteolytic su...   133   9e-30
tr|Q4C1E0|Q4C1E0_CROWT ATP-dependent Clp protease proteolytic su...   132   1e-29
tr|B4AWU3|B4AWU3_9CHRO ATP-dependent Clp protease, proteolytic s...   132   2e-29
tr|A6LLP4|A6LLP4_THEM4 ATP-dependent Clp protease proteolytic su...   132   2e-29
tr|A3IU92|A3IU92_9CHRO ATP-dependent Clp protease proteolytic su...   132   2e-29

>tr|A9NTR6|A9NTR6_PICSI ATP-dependent Clp protease proteolytic
           subunit OS=Picea sitchensis PE=2 SV=1
          Length = 317

 Score =  189 bits (481), Expect = 8e-47
 Identities = 100/149 (67%), Positives = 118/149 (79%), Gaps = 2/149 (1%)
 Frame = +2

Query: 173 RFVASSPFGHSNAVLSSDWAL--GSSPLSIQAPSGSAQRPPDTDVMGLLLRQRIVFLGFN 346
           R V+SS  G  +      WA   G   ++ Q P+ SAQR  D DVMGLLLRQRIVFLG N
Sbjct: 62  RLVSSSGRGFKSRAYIDAWAAATGGGVIAQQTPA-SAQRSADGDVMGLLLRQRIVFLGSN 120

Query: 347 LDEFAADAIISQLLLLDAQDPTKDIRLFINSPGGATSASMAVYDAIQLCRADISTIAFGI 526
           +D+F ADAIISQLLLLDAQ+P KDIRLFIN PGG+ +A+M ++D IQLCRAD+STIAFG+
Sbjct: 121 MDDFVADAIISQLLLLDAQNPNKDIRLFINCPGGSINAAMGIFDTIQLCRADVSTIAFGL 180

Query: 527 AASTAAIVLAGGTKGKRFAMPNTRIMLHQ 613
           AASTA+IVLAGG+KGKR AMPNTRIM+HQ
Sbjct: 181 AASTASIVLAGGSKGKRLAMPNTRIMMHQ 209


>tr|A9PA38|A9PA38_POPTR ATP-dependent Clp protease proteolytic
           subunit OS=Populus trichocarpa PE=2 SV=1
          Length = 297

 Score =  180 bits (457), Expect = 5e-44
 Identities = 91/121 (75%), Positives = 105/121 (86%)
 Frame = +2

Query: 251 SIQAPSGSAQRPPDTDVMGLLLRQRIVFLGFNLDEFAADAIISQLLLLDAQDPTKDIRLF 430
           S Q P+ S  R  +TD MGLLLR+RIVFLG N+D+F ADAIISQLLLLDAQDPTKDIRLF
Sbjct: 70  SPQTPATS-MRGAETDAMGLLLRERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLF 128

Query: 431 INSPGGATSASMAVYDAIQLCRADISTIAFGIAASTAAIVLAGGTKGKRFAMPNTRIMLH 610
           +N PGG+ SASMA+YD +QL RAD+STIA GI+ASTA+I+L GGTKGKRFAMPNTRIM+H
Sbjct: 129 VNCPGGSLSASMAIYDVVQLVRADVSTIALGISASTASIILGGGTKGKRFAMPNTRIMIH 188

Query: 611 Q 613
           Q
Sbjct: 189 Q 189


>tr|A7PJQ1|A7PJQ1_VITVI ATP-dependent Clp protease proteolytic
           subunit OS=Vitis vinifera GN=GSVIVT00018829001 PE=3 SV=1
          Length = 291

 Score =  177 bits (450), Expect = 3e-43
 Identities = 93/136 (68%), Positives = 111/136 (81%)
 Frame = +2

Query: 206 NAVLSSDWALGSSPLSIQAPSGSAQRPPDTDVMGLLLRQRIVFLGFNLDEFAADAIISQL 385
           ++VL+   A GS     Q P G   R  + D MGLLL++RIVFLG N+D+F ADAIISQL
Sbjct: 54  DSVLALPLAHGS-----QTP-GMGARGAEADAMGLLLKERIVFLGNNVDDFVADAIISQL 107

Query: 386 LLLDAQDPTKDIRLFINSPGGATSASMAVYDAIQLCRADISTIAFGIAASTAAIVLAGGT 565
           LLLDAQDPTKDIRLFINSPGG+ SA+MA+YD +QL RAD+ST+A GI+ASTA+I+L GGT
Sbjct: 108 LLLDAQDPTKDIRLFINSPGGSLSATMAIYDIVQLVRADVSTVALGISASTASIILGGGT 167

Query: 566 KGKRFAMPNTRIMLHQ 613
           KGKRFAMPNTRIM+HQ
Sbjct: 168 KGKRFAMPNTRIMIHQ 183


>tr|A9TZR6|A9TZR6_PHYPA ATP-dependent Clp protease proteolytic
           subunit (Fragment) OS=Physcomitrella patens subsp.
           patens GN=PHYPADRAFT_5896 PE=3 SV=1
          Length = 230

 Score =  171 bits (433), Expect = 3e-41
 Identities = 82/111 (73%), Positives = 98/111 (88%)
 Frame = +2

Query: 281 RPPDTDVMGLLLRQRIVFLGFNLDEFAADAIISQLLLLDAQDPTKDIRLFINSPGGATSA 460
           R  + DVMGL+L+QRIVFLG  +D+F ADAI+SQLLLLDA DP K+IRLF+N PGG+ SA
Sbjct: 9   RSAEADVMGLMLKQRIVFLGHQMDDFVADAIVSQLLLLDAVDPNKEIRLFVNCPGGSISA 68

Query: 461 SMAVYDAIQLCRADISTIAFGIAASTAAIVLAGGTKGKRFAMPNTRIMLHQ 613
           +MA++DAIQLCRAD+STI FG+AASTAAIVLAGGT GKR AMPN+RIM+HQ
Sbjct: 69  AMAIFDAIQLCRADVSTICFGLAASTAAIVLAGGTPGKRLAMPNSRIMMHQ 119


>tr|Q9FRM4|Q9FRM4_ORYSA ATP-dependent Clp protease proteolytic
           subunit OS=Oryza sativa GN=OSJNBa0056G17.6 PE=3 SV=1
          Length = 293

 Score =  166 bits (419), Expect = 1e-39
 Identities = 86/147 (58%), Positives = 107/147 (72%)
 Frame = +2

Query: 173 RFVASSPFGHSNAVLSSDWALGSSPLSIQAPSGSAQRPPDTDVMGLLLRQRIVFLGFNLD 352
           R  + +P   ++A  +  W  G    S  +P   A      DVMGLLLR+RIVFLG  ++
Sbjct: 43  RLTSLNPPRAASAPSTPLWEAGVRAESSDSPGAGA----GGDVMGLLLRERIVFLGNEIE 98

Query: 353 EFAADAIISQLLLLDAQDPTKDIRLFINSPGGATSASMAVYDAIQLCRADISTIAFGIAA 532
           +F ADA++SQLLLLDA DP  DIRLF+NSPGG+ SA+MA+YD +QL RAD+STI  GIA 
Sbjct: 99  DFLADAVVSQLLLLDAVDPNSDIRLFVNSPGGSLSATMAIYDVMQLVRADVSTIGLGIAG 158

Query: 533 STAAIVLAGGTKGKRFAMPNTRIMLHQ 613
           STA+I+L GGTKGKRFAMPNTRIM+HQ
Sbjct: 159 STASIILGGGTKGKRFAMPNTRIMIHQ 185


>tr|Q7XBR2|Q7XBR2_ORYSJ ATP-dependent Clp protease proteolytic
           subunit OS=Oryza sativa subsp. japonica GN=Os10g0580800
           PE=2 SV=1
          Length = 293

 Score =  166 bits (419), Expect = 1e-39
 Identities = 86/147 (58%), Positives = 107/147 (72%)
 Frame = +2

Query: 173 RFVASSPFGHSNAVLSSDWALGSSPLSIQAPSGSAQRPPDTDVMGLLLRQRIVFLGFNLD 352
           R  + +P   ++A  +  W  G    S  +P   A      DVMGLLLR+RIVFLG  ++
Sbjct: 43  RLTSLNPPRAASAPSTPLWEAGVRAESSDSPGAGA----GGDVMGLLLRERIVFLGNEIE 98

Query: 353 EFAADAIISQLLLLDAQDPTKDIRLFINSPGGATSASMAVYDAIQLCRADISTIAFGIAA 532
           +F ADA++SQLLLLDA DP  DIRLF+NSPGG+ SA+MA+YD +QL RAD+STI  GIA 
Sbjct: 99  DFLADAVVSQLLLLDAVDPNSDIRLFVNSPGGSLSATMAIYDVMQLVRADVSTIGLGIAG 158

Query: 533 STAAIVLAGGTKGKRFAMPNTRIMLHQ 613
           STA+I+L GGTKGKRFAMPNTRIM+HQ
Sbjct: 159 STASIILGGGTKGKRFAMPNTRIMIHQ 185


>tr|B4FP39|B4FP39_MAIZE ATP-dependent Clp protease proteolytic
           subunit 1 OS=Zea mays PE=2 SV=1
          Length = 289

 Score =  162 bits (411), Expect = 1e-38
 Identities = 78/106 (73%), Positives = 93/106 (87%)
 Frame = +2

Query: 296 DVMGLLLRQRIVFLGFNLDEFAADAIISQLLLLDAQDPTKDIRLFINSPGGATSASMAVY 475
           DVMGLLLR+RIVFLG  +++F ADA++SQLLLLDA DP  DIRLF+NSPGG+ SA+MA+Y
Sbjct: 76  DVMGLLLRERIVFLGNEIEDFLADAVVSQLLLLDAIDPDSDIRLFVNSPGGSLSATMAIY 135

Query: 476 DAIQLCRADISTIAFGIAASTAAIVLAGGTKGKRFAMPNTRIMLHQ 613
           D +QL RAD+STI  GIA STA+I+L GGTKGKRFAMPNTRIM+HQ
Sbjct: 136 DVMQLVRADVSTIGMGIAGSTASIILGGGTKGKRFAMPNTRIMIHQ 181


>tr|A9RE44|A9RE44_PHYPA ATP-dependent Clp protease proteolytic
           subunit OS=Physcomitrella patens subsp. patens
           GN=PHYPADRAFT_64895 PE=3 SV=1
          Length = 232

 Score =  160 bits (406), Expect = 4e-38
 Identities = 78/113 (69%), Positives = 96/113 (84%)
 Frame = +2

Query: 275 AQRPPDTDVMGLLLRQRIVFLGFNLDEFAADAIISQLLLLDAQDPTKDIRLFINSPGGAT 454
           A +  + DVMGL+L+QRIVFLG  +D+F AD+IISQLLLLDA DP +DIRLFIN PGG+ 
Sbjct: 9   AMQSAEGDVMGLMLKQRIVFLGNQMDDFVADSIISQLLLLDAIDPKQDIRLFINCPGGSI 68

Query: 455 SASMAVYDAIQLCRADISTIAFGIAASTAAIVLAGGTKGKRFAMPNTRIMLHQ 613
           SA+M ++DA+QLC+ DISTI FG AASTAA++LA GTKGKR AMPN+RIM+HQ
Sbjct: 69  SAAMGIFDAMQLCKCDISTICFGFAASTAALLLAAGTKGKRLAMPNSRIMMHQ 121


>tr|A9NTW0|A9NTW0_PICSI ATP-dependent Clp protease proteolytic
           subunit OS=Picea sitchensis PE=2 SV=1
          Length = 341

 Score =  158 bits (399), Expect = 3e-37
 Identities = 90/190 (47%), Positives = 119/190 (62%), Gaps = 8/190 (4%)
 Frame = +2

Query: 68  PLCPPVHGNRHQAQVLARASAGGWPGCQDLS-------SSQHRFVASSPFGHSNAVLSSD 226
           P CP +     Q+ +  + S    P C   S        S+ R  A  P G   A+ SS 
Sbjct: 23  PSCPSI-----QSAIFNKNSLSSPPCCFVCSCSSASHLGSRQRMQAVKPIG---ALSSSR 74

Query: 227 WALGSSPLSIQAPSGS-AQRPPDTDVMGLLLRQRIVFLGFNLDEFAADAIISQLLLLDAQ 403
            +L +S  S+   S     RP D D   +LLRQRIVFLG  +D+ +AD IISQLLLLD +
Sbjct: 75  GSLSASLDSVGTSSSLWMPRPEDLDTTSMLLRQRIVFLGSQVDDVSADFIISQLLLLDLE 134

Query: 404 DPTKDIRLFINSPGGATSASMAVYDAIQLCRADISTIAFGIAASTAAIVLAGGTKGKRFA 583
           D TKDI+LFINSPGG+ +A M +YDA++LC+AD+ST+ FG+AAS  A +LA GT+GKRF 
Sbjct: 135 DSTKDIKLFINSPGGSVTAGMGIYDAMKLCKADVSTVCFGLAASMGAFLLASGTRGKRFC 194

Query: 584 MPNTRIMLHQ 613
           MPN ++M+HQ
Sbjct: 195 MPNAKVMIHQ 204


>tr|A9NRW7|A9NRW7_PICSI ATP-dependent Clp protease proteolytic
           subunit OS=Picea sitchensis PE=2 SV=1
          Length = 341

 Score =  157 bits (396), Expect = 6e-37
 Identities = 90/190 (47%), Positives = 119/190 (62%), Gaps = 8/190 (4%)
 Frame = +2

Query: 68  PLCPPVHGNRHQAQVLARASAGGWPGCQDLS-------SSQHRFVASSPFGHSNAVLSSD 226
           P CP +     Q+ +  + S    P C   S        S+ R  A  P G   A+ SS 
Sbjct: 23  PSCPSI-----QSAIFNKNSLSSPPCCFVCSCSSASHLGSRQRMQAVKPNG---ALSSSR 74

Query: 227 WALGSSPLSIQAPSGS-AQRPPDTDVMGLLLRQRIVFLGFNLDEFAADAIISQLLLLDAQ 403
            +L +S  S+   S     RP D D   +LLRQRIVFLG  +D+ +AD IISQLLLLD +
Sbjct: 75  GSLSASLDSVGTSSSLWMPRPEDLDTTSMLLRQRIVFLGSQVDDVSADFIISQLLLLDLE 134

Query: 404 DPTKDIRLFINSPGGATSASMAVYDAIQLCRADISTIAFGIAASTAAIVLAGGTKGKRFA 583
           D TKDI+LFINSPGG+ +A M +YDA++LC+AD+ST+ FG+AAS  A +LA GT+GKRF 
Sbjct: 135 DSTKDIKLFINSPGGSVTAGMGIYDAMKLCKADVSTVCFGLAASMGAFLLASGTRGKRFC 194

Query: 584 MPNTRIMLHQ 613
           MPN ++M+HQ
Sbjct: 195 MPNAKVMIHQ 204