DK955398
Clone id TST39A01NGRL0022_P21
Library
Length 621
Definition Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0022_P21. 5' end sequence.
Accession
Tissue type prothallia with plantlets
Developmental stage gametophytes with sporophytes
Contig ID
Sequence
CTCAGAAGTCTGAGCCGTGGAAACACGTAATCGTTACAAGGATAGACGCCATCTCTTCTT
CTCCAAGGTGTCAATTACTTGATCATTGTTCTGTTCGCTCTCGTTTAAACCCCAATCGTA
TCGCTTCATTAAGTTCTCTTGGCTTGGAGGCGAGAAAAGGAAATGGCTGCAGTTGGCTAC
TTTCCTAAAACACAAATTGCTTCAGCAGCTAAGCTCTTTGAGGACCCTTTTCATTCTCAT
ATCTCTTCAAGAAGATGTTTGTGGGCTTTTCCTGCCATATCCAGGAATTCCGTTCTAAGA
ACAGGTGACAAAATGCAAGCCGTTCTCCAGCGGCACAGAATGGCTCCTCTTTGTCGAGCT
GAAAGCCAAGATGAAAGCTCAAGTTCCAGTGTTGGATCAGCAGTTGAAGAAAGACCAACT
GATTTGCAGGAGGAGGAAGAAGATTCAGCAAATCAGGGCCCTGGGAGCTTATCATCTTGG
CTTTATCCGTCAAAAGATGATCTTCCAGATGATGTGGAGATGAGCCTTTTTGATCATTTG
GATGAGCTTAGAGATCGCATACTTATATCAGTGGCAGTTGTGGGTGTGGCTATTTTGGGT
TGTTTTGCTTTTGCAAAGGAT
■■Homology search results ■■ -
sp_hit_id P54086
Definition sp|P54086|Y194_SYNY3 Uncharacterized protein sll0194 OS=Synechocystis sp. (strain PCC 6803)
Align length 41
Score (bit) 59.3
E-value 2.0e-08
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK955398|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0022_P21, 5'
(621 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|P54086|Y194_SYNY3 Uncharacterized protein sll0194 OS=Synechoc... 59 2e-08
sp|Q6B8S9|YCF43_GRATL Uncharacterized tatC-like protein ycf43 OS... 37 0.082
sp|Q9ZM59|TATC_HELPJ Sec-independent protein translocase protein... 37 0.082
sp|O25701|TATC_HELPY Sec-independent protein translocase protein... 37 0.11
sp|O78493|YCF43_GUITH Uncharacterized tatC-like protein ycf43 OS... 35 0.31
sp|P54078|TATC_MYCLE Sec-independent protein translocase protein... 34 0.53
sp|P66895|TATC_MYCTU Sec-independent protein translocase protein... 34 0.69
sp|P66896|TATC_MYCBO Sec-independent protein translocase protein... 34 0.69
sp|P54085|TATC_AZOCH Sec-independent protein translocase protein... 34 0.69
sp|P42252|TATCD_BACSU Sec-independent protein translocase protei... 32 3.4
sp|Q9TLS5|YCF43_CYACA Uncharacterized tatC-like protein ycf43 OS... 31 4.5
sp|Q9Z9P4|YDIJ_BACHD Uncharacterized protein BH0553 OS=Bacillus ... 30 7.7

>sp|P54086|Y194_SYNY3 Uncharacterized protein sll0194
OS=Synechocystis sp. (strain PCC 6803) GN=sll0194 PE=3
SV=1
Length = 254

Score = 59.3 bits (142), Expect = 2e-08
Identities = 26/41 (63%), Positives = 32/41 (78%)
Frame = +1

Query: 496 DDLPDDVEMSLFDHLDELRDRILISVAVVGVAILGCFAFAK 618
D++PDDVEMSLFDHLDELR RI +S+ V V ++ CF F K
Sbjct: 19 DEVPDDVEMSLFDHLDELRTRIFLSLGAVLVGVVACFIFVK 59


>sp|Q6B8S9|YCF43_GRATL Uncharacterized tatC-like protein ycf43
OS=Gracilaria tenuistipitata var. liui GN=ycf43 PE=3
SV=1
Length = 238

Score = 37.0 bits (84), Expect = 0.082
Identities = 16/37 (43%), Positives = 24/37 (64%)
Frame = +1

Query: 511 DVEMSLFDHLDELRDRILISVAVVGVAILGCFAFAKD 621
+ EMS+F+HL+ELR RI I+ + V CF + K+
Sbjct: 8 NTEMSIFEHLEELRQRIFIAALIFIVITAICFTYMKN 44


>sp|Q9ZM59|TATC_HELPJ Sec-independent protein translocase protein
tatC homolog OS=Helicobacter pylori J99 GN=tatC PE=3
SV=1
Length = 249

Score = 37.0 bits (84), Expect = 0.082
Identities = 16/29 (55%), Positives = 21/29 (72%)
Frame = +1

Query: 535 HLDELRDRILISVAVVGVAILGCFAFAKD 621
HL ELR R+++SV + VA LGCF F K+
Sbjct: 8 HLQELRKRLMVSVGTILVAFLGCFHFWKN 36


>sp|O25701|TATC_HELPY Sec-independent protein translocase protein
tatC homolog OS=Helicobacter pylori GN=tatC PE=3 SV=1
Length = 253

Score = 36.6 bits (83), Expect = 0.11
Identities = 16/28 (57%), Positives = 20/28 (71%)
Frame = +1

Query: 535 HLDELRDRILISVAVVGVAILGCFAFAK 618
HL ELR R+++SV + VA LGCF F K
Sbjct: 8 HLQELRKRLMVSVGTILVAFLGCFHFWK 35


>sp|O78493|YCF43_GUITH Uncharacterized tatC-like protein ycf43
OS=Guillardia theta GN=ycf43 PE=3 SV=1
Length = 290

Score = 35.0 bits (79), Expect = 0.31
Identities = 15/37 (40%), Positives = 23/37 (62%)
Frame = +1

Query: 511 DVEMSLFDHLDELRDRILISVAVVGVAILGCFAFAKD 621
+ EMSL +HL+E+R R S +V+ I+ C F K+
Sbjct: 54 EAEMSLAEHLEEIRQRAFWSFSVLTTMIISCIIFVKN 90


>sp|P54078|TATC_MYCLE Sec-independent protein translocase protein
tatC homolog OS=Mycobacterium leprae GN=tatC PE=3 SV=2
Length = 310

Score = 34.3 bits (77), Expect = 0.53
Identities = 16/29 (55%), Positives = 20/29 (68%)
Frame = +1

Query: 511 DVEMSLFDHLDELRDRILISVAVVGVAIL 597
D MSL DHL ELR R+LIS+A + V +
Sbjct: 22 DATMSLIDHLTELRTRLLISLAAIVVTTI 50


>sp|P66895|TATC_MYCTU Sec-independent protein translocase protein
tatC homolog OS=Mycobacterium tuberculosis GN=tatC PE=3
SV=1
Length = 308

Score = 33.9 bits (76), Expect = 0.69
Identities = 17/34 (50%), Positives = 22/34 (64%)
Frame = +1

Query: 511 DVEMSLFDHLDELRDRILISVAVVGVAILGCFAF 612
D MSL DHL ELR R+LIS+A + V + F +
Sbjct: 22 DATMSLVDHLTELRTRLLISLAAILVTTIFGFVW 55


>sp|P66896|TATC_MYCBO Sec-independent protein translocase protein
tatC homolog OS=Mycobacterium bovis GN=tatC PE=3 SV=1
Length = 308

Score = 33.9 bits (76), Expect = 0.69
Identities = 17/34 (50%), Positives = 22/34 (64%)
Frame = +1

Query: 511 DVEMSLFDHLDELRDRILISVAVVGVAILGCFAF 612
D MSL DHL ELR R+LIS+A + V + F +
Sbjct: 22 DATMSLVDHLTELRTRLLISLAAILVTTIFGFVW 55


>sp|P54085|TATC_AZOCH Sec-independent protein translocase protein
tatC homolog OS=Azotobacter chroococcum mcd 1 GN=tatC
PE=3 SV=2
Length = 255

Score = 33.9 bits (76), Expect = 0.69
Identities = 20/40 (50%), Positives = 24/40 (60%), Gaps = 1/40 (2%)
Frame = +1

Query: 505 PD-DVEMSLFDHLDELRDRILISVAVVGVAILGCFAFAKD 621
PD D +M L HL ELR R+L SVA V + F FA+D
Sbjct: 5 PDSDQDMPLVAHLTELRSRLLRSVAAVLLIFAALFYFAQD 44


>sp|P42252|TATCD_BACSU Sec-independent protein translocase protein
tatCd OS=Bacillus subtilis GN=tatCd PE=1 SV=3
Length = 245

Score = 31.6 bits (70), Expect = 3.4
Identities = 14/38 (36%), Positives = 23/38 (60%)
Frame = +1

Query: 508 DDVEMSLFDHLDELRDRILISVAVVGVAILGCFAFAKD 621
D E L HL+ELR RI++++A + ++ F F +D
Sbjct: 2 DKKETHLIGHLEELRRRIIVTLAAFFLFLITAFLFVQD 39


tr_hit_id A9SMU6
Definition tr|A9SMU6|A9SMU6_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens
Align length 51
Score (bit) 84.3
E-value 5.0e-15
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK955398|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0022_P21, 5'
(621 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|A9SMU6|A9SMU6_PHYPA Predicted protein OS=Physcomitrella paten... 84 5e-15
tr|A9NMM0|A9NMM0_PICSI Putative uncharacterized protein OS=Picea... 84 5e-15
tr|A9RY97|A9RY97_PHYPA Predicted protein (Fragment) OS=Physcomit... 84 7e-15
tr|Q9AVE6|Q9AVE6_ORYSJ cDNA clone:J013104L23, full insert sequen... 82 2e-14
tr|B8A8L7|B8A8L7_ORYSI Putative uncharacterized protein OS=Oryza... 82 2e-14
tr|A2ZTJ3|A2ZTJ3_ORYSJ Putative uncharacterized protein OS=Oryza... 82 2e-14
tr|Q9SJV5|Q9SJV5_ARATH TATC-like protein (CpTatC) OS=Arabidopsis... 82 3e-14
tr|B8A0G3|B8A0G3_MAIZE Putative uncharacterized protein OS=Zea m... 82 3e-14
tr|B6SIW0|B6SIW0_MAIZE Putative uncharacterized protein OS=Zea m... 82 3e-14
tr|Q94G17|Q94G17_PEA TatC OS=Pisum sativum GN=tatC PE=2 SV=1 75 4e-12
tr|A5B8A0|A5B8A0_VITVI Putative uncharacterized protein OS=Vitis... 74 7e-12
tr|B7FJT7|B7FJT7_MEDTR Putative uncharacterized protein OS=Medic... 73 1e-11
tr|A4S4D7|A4S4D7_OSTLU Tat family transporter: protein export Ta... 72 3e-11
tr|Q00ZA3|Q00ZA3_OSTTA TATC-like protein (ISS) OS=Ostreococcus t... 68 5e-10
tr|A0YZ17|A0YZ17_9CYAN Sec-independent periplasmic protein trans... 64 7e-09
tr|B8HNS1|B8HNS1_9CHRO Sec-independent protein translocase, TatC... 60 1e-07
tr|B4WJ18|B4WJ18_9SYNE Twin arginine-targeting protein transloca... 58 5e-07
tr|B4B748|B4B748_9CHRO Sec-independent protein translocase, TatC... 58 5e-07
tr|Q8YU98|Q8YU98_ANASP All2456 protein OS=Anabaena sp. (strain P... 55 3e-06
tr|B2J3K9|B2J3K9_NOSP7 Sec-independent protein translocase, TatC... 55 3e-06
tr|B0JLU5|B0JLU5_MICAN Sec-independent protein translocase OS=Mi... 55 3e-06
tr|B4VMB2|B4VMB2_9CYAN Twin arginine-targeting protein transloca... 55 3e-06
tr|A8J2Y6|A8J2Y6_CHLRE TatC-like sec-independent protein translo... 55 3e-06
tr|Q3MG73|Q3MG73_ANAVT Sec-independent protein translocase TatC ... 55 4e-06
tr|B7KKY8|B7KKY8_9CHRO Sec-independent protein translocase, TatC... 55 4e-06
tr|B7JV79|B7JV79_SYNP8 Sec-independent protein translocase, TatC... 55 4e-06
tr|B4C5R3|B4C5R3_9CHRO Sec-independent protein translocase, TatC... 55 4e-06
tr|B1WUV4|B1WUV4_CYAA5 Sec-independent protein translocase prote... 52 2e-05
tr|Q8KPU8|Q8KPU8_SYNE7 Sec-independent protein translocase TatC ... 52 4e-05
tr|Q5N642|Q5N642_SYNP6 Sec-independent protein translocase prote... 52 4e-05

>tr|A9SMU6|A9SMU6_PHYPA Predicted protein OS=Physcomitrella patens
subsp. patens GN=PHYPADRAFT_132448 PE=4 SV=1
Length = 262

Score = 84.3 bits (207), Expect = 5e-15
Identities = 37/51 (72%), Positives = 44/51 (86%)
Frame = +1

Query: 469 LSSWLYPSKDDLPDDVEMSLFDHLDELRDRILISVAVVGVAILGCFAFAKD 621
LS WLYP +++LPDD EM++FDHL+ELRDR+LISV VGVAI GCF FAKD
Sbjct: 7 LSKWLYPPEEELPDDKEMTIFDHLEELRDRLLISVVAVGVAIAGCFVFAKD 57


>tr|A9NMM0|A9NMM0_PICSI Putative uncharacterized protein OS=Picea
sitchensis PE=2 SV=1
Length = 372

Score = 84.3 bits (207), Expect = 5e-15
Identities = 40/66 (60%), Positives = 49/66 (74%)
Frame = +1

Query: 424 LQEEEEDSANQGPGSLSSWLYPSKDDLPDDVEMSLFDHLDELRDRILISVAVVGVAILGC 603
LQ EED +S W+YP K++LPDD EMS+FDHL+ELR+RI +SV VGVAIL C
Sbjct: 109 LQSTEEDYQEN---VVSKWIYPGKEELPDDKEMSIFDHLEELRERIFVSVLAVGVAILAC 165

Query: 604 FAFAKD 621
FAF+KD
Sbjct: 166 FAFSKD 171


>tr|A9RY97|A9RY97_PHYPA Predicted protein (Fragment)
OS=Physcomitrella patens subsp. patens
GN=PHYPADRAFT_121137 PE=4 SV=1
Length = 258

Score = 84.0 bits (206), Expect = 7e-15
Identities = 36/52 (69%), Positives = 45/52 (86%)
Frame = +1

Query: 466 SLSSWLYPSKDDLPDDVEMSLFDHLDELRDRILISVAVVGVAILGCFAFAKD 621
SLS WLYP +++LPDD EM++FDHL+ELR+R+L+SV VG AILGCF FAKD
Sbjct: 2 SLSKWLYPPEEELPDDKEMTIFDHLEELRERLLVSVLAVGAAILGCFVFAKD 53


>tr|Q9AVE6|Q9AVE6_ORYSJ cDNA clone:J013104L23, full insert sequence
OS=Oryza sativa subsp. japonica GN=OsTATC PE=2 SV=1
Length = 359

Score = 82.4 bits (202), Expect = 2e-14
Identities = 41/66 (62%), Positives = 51/66 (77%)
Frame = +1

Query: 424 LQEEEEDSANQGPGSLSSWLYPSKDDLPDDVEMSLFDHLDELRDRILISVAVVGVAILGC 603
+ E+EE S SL ++LYPSK+ LPDD EMS+FDHL+ELRDRI +SV VG AILGC
Sbjct: 104 ITEDEEQS------SLYNFLYPSKELLPDDKEMSIFDHLEELRDRIFVSVLAVGAAILGC 157

Query: 604 FAFAKD 621
FA++KD
Sbjct: 158 FAYSKD 163


>tr|B8A8L7|B8A8L7_ORYSI Putative uncharacterized protein OS=Oryza
sativa subsp. indica GN=OsI_02087 PE=4 SV=1
Length = 359

Score = 82.4 bits (202), Expect = 2e-14
Identities = 41/66 (62%), Positives = 51/66 (77%)
Frame = +1

Query: 424 LQEEEEDSANQGPGSLSSWLYPSKDDLPDDVEMSLFDHLDELRDRILISVAVVGVAILGC 603
+ E+EE S SL ++LYPSK+ LPDD EMS+FDHL+ELRDRI +SV VG AILGC
Sbjct: 104 ITEDEEQS------SLYNFLYPSKELLPDDKEMSIFDHLEELRDRIFVSVLAVGAAILGC 157

Query: 604 FAFAKD 621
FA++KD
Sbjct: 158 FAYSKD 163


>tr|A2ZTJ3|A2ZTJ3_ORYSJ Putative uncharacterized protein OS=Oryza
sativa subsp. japonica GN=OsJ_001865 PE=4 SV=1
Length = 435

Score = 82.4 bits (202), Expect = 2e-14
Identities = 41/66 (62%), Positives = 51/66 (77%)
Frame = +1

Query: 424 LQEEEEDSANQGPGSLSSWLYPSKDDLPDDVEMSLFDHLDELRDRILISVAVVGVAILGC 603
+ E+EE S SL ++LYPSK+ LPDD EMS+FDHL+ELRDRI +SV VG AILGC
Sbjct: 180 ITEDEEQS------SLYNFLYPSKELLPDDKEMSIFDHLEELRDRIFVSVLAVGAAILGC 233

Query: 604 FAFAKD 621
FA++KD
Sbjct: 234 FAYSKD 239


>tr|Q9SJV5|Q9SJV5_ARATH TATC-like protein (CpTatC) OS=Arabidopsis
thaliana GN=apg2 PE=2 SV=2
Length = 340

Score = 82.0 bits (201), Expect = 3e-14
Identities = 36/66 (54%), Positives = 50/66 (75%)
Frame = +1

Query: 424 LQEEEEDSANQGPGSLSSWLYPSKDDLPDDVEMSLFDHLDELRDRILISVAVVGVAILGC 603
+++ DS+ S+ +LYP K++LPDD EM++FDHL+ELR+RI +SV VG AILGC
Sbjct: 79 VEDRPPDSSEDRSSSVYEFLYPRKEELPDDKEMTIFDHLEELRERIFVSVLAVGAAILGC 138

Query: 604 FAFAKD 621
FAF+KD
Sbjct: 139 FAFSKD 144


>tr|B8A0G3|B8A0G3_MAIZE Putative uncharacterized protein OS=Zea mays
PE=2 SV=1
Length = 351

Score = 81.6 bits (200), Expect = 3e-14
Identities = 42/63 (66%), Positives = 49/63 (77%)
Frame = +1

Query: 433 EEEDSANQGPGSLSSWLYPSKDDLPDDVEMSLFDHLDELRDRILISVAVVGVAILGCFAF 612
+EE SA L ++LYPSKD LPDD EMS+FDHL+ELR+RI ISV VG AILGCFAF
Sbjct: 99 QEEQSA------LYNFLYPSKDLLPDDKEMSIFDHLEELRERIFISVLAVGAAILGCFAF 152

Query: 613 AKD 621
+KD
Sbjct: 153 SKD 155


>tr|B6SIW0|B6SIW0_MAIZE Putative uncharacterized protein OS=Zea mays
PE=2 SV=1
Length = 307

Score = 81.6 bits (200), Expect = 3e-14
Identities = 42/63 (66%), Positives = 49/63 (77%)
Frame = +1

Query: 433 EEEDSANQGPGSLSSWLYPSKDDLPDDVEMSLFDHLDELRDRILISVAVVGVAILGCFAF 612
+EE SA L ++LYPSKD LPDD EMS+FDHL+ELR+RI ISV VG AILGCFAF
Sbjct: 99 QEEQSA------LYNFLYPSKDLLPDDKEMSIFDHLEELRERIFISVLAVGAAILGCFAF 152

Query: 613 AKD 621
+KD
Sbjct: 153 SKD 155


>tr|Q94G17|Q94G17_PEA TatC OS=Pisum sativum GN=tatC PE=2 SV=1
Length = 353

Score = 74.7 bits (182), Expect = 4e-12
Identities = 35/52 (67%), Positives = 44/52 (84%)
Frame = +1

Query: 466 SLSSWLYPSKDDLPDDVEMSLFDHLDELRDRILISVAVVGVAILGCFAFAKD 621
++ +LYPSK+ LPDD EMS+FDHL+ELR+RI ISV VG +ILGCFAF+KD
Sbjct: 106 AIYDFLYPSKELLPDDKEMSIFDHLEELRERIFISVLGVGGSILGCFAFSKD 157