DK955398 |
Clone id |
TST39A01NGRL0022_P21 |
Library |
TST39 |
Length |
621 |
Definition |
Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0022_P21. 5' end sequence. |
Accession |
DK955398 |
Tissue type |
prothallia with plantlets |
Developmental stage |
gametophytes with sporophytes |
Contig ID |
CL1014Contig1 |
Sequence |
CTCAGAAGTCTGAGCCGTGGAAACACGTAATCGTTACAAGGATAGACGCCATCTCTTCTT CTCCAAGGTGTCAATTACTTGATCATTGTTCTGTTCGCTCTCGTTTAAACCCCAATCGTA TCGCTTCATTAAGTTCTCTTGGCTTGGAGGCGAGAAAAGGAAATGGCTGCAGTTGGCTAC TTTCCTAAAACACAAATTGCTTCAGCAGCTAAGCTCTTTGAGGACCCTTTTCATTCTCAT ATCTCTTCAAGAAGATGTTTGTGGGCTTTTCCTGCCATATCCAGGAATTCCGTTCTAAGA ACAGGTGACAAAATGCAAGCCGTTCTCCAGCGGCACAGAATGGCTCCTCTTTGTCGAGCT GAAAGCCAAGATGAAAGCTCAAGTTCCAGTGTTGGATCAGCAGTTGAAGAAAGACCAACT GATTTGCAGGAGGAGGAAGAAGATTCAGCAAATCAGGGCCCTGGGAGCTTATCATCTTGG CTTTATCCGTCAAAAGATGATCTTCCAGATGATGTGGAGATGAGCCTTTTTGATCATTTG GATGAGCTTAGAGATCGCATACTTATATCAGTGGCAGTTGTGGGTGTGGCTATTTTGGGT TGTTTTGCTTTTGCAAAGGAT |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
P54086 |
Definition |
sp|P54086|Y194_SYNY3 Uncharacterized protein sll0194 OS=Synechocystis sp. (strain PCC 6803) |
Align length |
41 |
Score (bit) |
59.3 |
E-value |
2.0e-08 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A9SMU6 |
Definition |
tr|A9SMU6|A9SMU6_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens |
Align length |
51 |
Score (bit) |
84.3 |
E-value |
5.0e-15 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK955398|Adiantum capillus-veneris mRNA, clone: TST39A01NGRL0022_P21, 5' (621 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|A9SMU6|A9SMU6_PHYPA Predicted protein OS=Physcomitrella paten... 84 5e-15 tr|A9NMM0|A9NMM0_PICSI Putative uncharacterized protein OS=Picea... 84 5e-15 tr|A9RY97|A9RY97_PHYPA Predicted protein (Fragment) OS=Physcomit... 84 7e-15 tr|Q9AVE6|Q9AVE6_ORYSJ cDNA clone:J013104L23, full insert sequen... 82 2e-14 tr|B8A8L7|B8A8L7_ORYSI Putative uncharacterized protein OS=Oryza... 82 2e-14 tr|A2ZTJ3|A2ZTJ3_ORYSJ Putative uncharacterized protein OS=Oryza... 82 2e-14 tr|Q9SJV5|Q9SJV5_ARATH TATC-like protein (CpTatC) OS=Arabidopsis... 82 3e-14 tr|B8A0G3|B8A0G3_MAIZE Putative uncharacterized protein OS=Zea m... 82 3e-14 tr|B6SIW0|B6SIW0_MAIZE Putative uncharacterized protein OS=Zea m... 82 3e-14 tr|Q94G17|Q94G17_PEA TatC OS=Pisum sativum GN=tatC PE=2 SV=1 75 4e-12 tr|A5B8A0|A5B8A0_VITVI Putative uncharacterized protein OS=Vitis... 74 7e-12 tr|B7FJT7|B7FJT7_MEDTR Putative uncharacterized protein OS=Medic... 73 1e-11 tr|A4S4D7|A4S4D7_OSTLU Tat family transporter: protein export Ta... 72 3e-11 tr|Q00ZA3|Q00ZA3_OSTTA TATC-like protein (ISS) OS=Ostreococcus t... 68 5e-10 tr|A0YZ17|A0YZ17_9CYAN Sec-independent periplasmic protein trans... 64 7e-09 tr|B8HNS1|B8HNS1_9CHRO Sec-independent protein translocase, TatC... 60 1e-07 tr|B4WJ18|B4WJ18_9SYNE Twin arginine-targeting protein transloca... 58 5e-07 tr|B4B748|B4B748_9CHRO Sec-independent protein translocase, TatC... 58 5e-07 tr|Q8YU98|Q8YU98_ANASP All2456 protein OS=Anabaena sp. (strain P... 55 3e-06 tr|B2J3K9|B2J3K9_NOSP7 Sec-independent protein translocase, TatC... 55 3e-06 tr|B0JLU5|B0JLU5_MICAN Sec-independent protein translocase OS=Mi... 55 3e-06 tr|B4VMB2|B4VMB2_9CYAN Twin arginine-targeting protein transloca... 55 3e-06 tr|A8J2Y6|A8J2Y6_CHLRE TatC-like sec-independent protein translo... 55 3e-06 tr|Q3MG73|Q3MG73_ANAVT Sec-independent protein translocase TatC ... 55 4e-06 tr|B7KKY8|B7KKY8_9CHRO Sec-independent protein translocase, TatC... 55 4e-06 tr|B7JV79|B7JV79_SYNP8 Sec-independent protein translocase, TatC... 55 4e-06 tr|B4C5R3|B4C5R3_9CHRO Sec-independent protein translocase, TatC... 55 4e-06 tr|B1WUV4|B1WUV4_CYAA5 Sec-independent protein translocase prote... 52 2e-05 tr|Q8KPU8|Q8KPU8_SYNE7 Sec-independent protein translocase TatC ... 52 4e-05 tr|Q5N642|Q5N642_SYNP6 Sec-independent protein translocase prote... 52 4e-05
>tr|A9SMU6|A9SMU6_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_132448 PE=4 SV=1 Length = 262
Score = 84.3 bits (207), Expect = 5e-15 Identities = 37/51 (72%), Positives = 44/51 (86%) Frame = +1
Query: 469 LSSWLYPSKDDLPDDVEMSLFDHLDELRDRILISVAVVGVAILGCFAFAKD 621 LS WLYP +++LPDD EM++FDHL+ELRDR+LISV VGVAI GCF FAKD Sbjct: 7 LSKWLYPPEEELPDDKEMTIFDHLEELRDRLLISVVAVGVAIAGCFVFAKD 57
>tr|A9NMM0|A9NMM0_PICSI Putative uncharacterized protein OS=Picea sitchensis PE=2 SV=1 Length = 372
Score = 84.3 bits (207), Expect = 5e-15 Identities = 40/66 (60%), Positives = 49/66 (74%) Frame = +1
Query: 424 LQEEEEDSANQGPGSLSSWLYPSKDDLPDDVEMSLFDHLDELRDRILISVAVVGVAILGC 603 LQ EED +S W+YP K++LPDD EMS+FDHL+ELR+RI +SV VGVAIL C Sbjct: 109 LQSTEEDYQEN---VVSKWIYPGKEELPDDKEMSIFDHLEELRERIFVSVLAVGVAILAC 165
Query: 604 FAFAKD 621 FAF+KD Sbjct: 166 FAFSKD 171
>tr|A9RY97|A9RY97_PHYPA Predicted protein (Fragment) OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_121137 PE=4 SV=1 Length = 258
Score = 84.0 bits (206), Expect = 7e-15 Identities = 36/52 (69%), Positives = 45/52 (86%) Frame = +1
Query: 466 SLSSWLYPSKDDLPDDVEMSLFDHLDELRDRILISVAVVGVAILGCFAFAKD 621 SLS WLYP +++LPDD EM++FDHL+ELR+R+L+SV VG AILGCF FAKD Sbjct: 2 SLSKWLYPPEEELPDDKEMTIFDHLEELRERLLVSVLAVGAAILGCFVFAKD 53
>tr|Q9AVE6|Q9AVE6_ORYSJ cDNA clone:J013104L23, full insert sequence OS=Oryza sativa subsp. japonica GN=OsTATC PE=2 SV=1 Length = 359
Score = 82.4 bits (202), Expect = 2e-14 Identities = 41/66 (62%), Positives = 51/66 (77%) Frame = +1
Query: 424 LQEEEEDSANQGPGSLSSWLYPSKDDLPDDVEMSLFDHLDELRDRILISVAVVGVAILGC 603 + E+EE S SL ++LYPSK+ LPDD EMS+FDHL+ELRDRI +SV VG AILGC Sbjct: 104 ITEDEEQS------SLYNFLYPSKELLPDDKEMSIFDHLEELRDRIFVSVLAVGAAILGC 157
Query: 604 FAFAKD 621 FA++KD Sbjct: 158 FAYSKD 163
>tr|B8A8L7|B8A8L7_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_02087 PE=4 SV=1 Length = 359
Score = 82.4 bits (202), Expect = 2e-14 Identities = 41/66 (62%), Positives = 51/66 (77%) Frame = +1
Query: 424 LQEEEEDSANQGPGSLSSWLYPSKDDLPDDVEMSLFDHLDELRDRILISVAVVGVAILGC 603 + E+EE S SL ++LYPSK+ LPDD EMS+FDHL+ELRDRI +SV VG AILGC Sbjct: 104 ITEDEEQS------SLYNFLYPSKELLPDDKEMSIFDHLEELRDRIFVSVLAVGAAILGC 157
Query: 604 FAFAKD 621 FA++KD Sbjct: 158 FAYSKD 163
>tr|A2ZTJ3|A2ZTJ3_ORYSJ Putative uncharacterized protein OS=Oryza sativa subsp. japonica GN=OsJ_001865 PE=4 SV=1 Length = 435
Score = 82.4 bits (202), Expect = 2e-14 Identities = 41/66 (62%), Positives = 51/66 (77%) Frame = +1
Query: 424 LQEEEEDSANQGPGSLSSWLYPSKDDLPDDVEMSLFDHLDELRDRILISVAVVGVAILGC 603 + E+EE S SL ++LYPSK+ LPDD EMS+FDHL+ELRDRI +SV VG AILGC Sbjct: 180 ITEDEEQS------SLYNFLYPSKELLPDDKEMSIFDHLEELRDRIFVSVLAVGAAILGC 233
Query: 604 FAFAKD 621 FA++KD Sbjct: 234 FAYSKD 239
>tr|Q9SJV5|Q9SJV5_ARATH TATC-like protein (CpTatC) OS=Arabidopsis thaliana GN=apg2 PE=2 SV=2 Length = 340
Score = 82.0 bits (201), Expect = 3e-14 Identities = 36/66 (54%), Positives = 50/66 (75%) Frame = +1
Query: 424 LQEEEEDSANQGPGSLSSWLYPSKDDLPDDVEMSLFDHLDELRDRILISVAVVGVAILGC 603 +++ DS+ S+ +LYP K++LPDD EM++FDHL+ELR+RI +SV VG AILGC Sbjct: 79 VEDRPPDSSEDRSSSVYEFLYPRKEELPDDKEMTIFDHLEELRERIFVSVLAVGAAILGC 138
Query: 604 FAFAKD 621 FAF+KD Sbjct: 139 FAFSKD 144
>tr|B8A0G3|B8A0G3_MAIZE Putative uncharacterized protein OS=Zea mays PE=2 SV=1 Length = 351
Score = 81.6 bits (200), Expect = 3e-14 Identities = 42/63 (66%), Positives = 49/63 (77%) Frame = +1
Query: 433 EEEDSANQGPGSLSSWLYPSKDDLPDDVEMSLFDHLDELRDRILISVAVVGVAILGCFAF 612 +EE SA L ++LYPSKD LPDD EMS+FDHL+ELR+RI ISV VG AILGCFAF Sbjct: 99 QEEQSA------LYNFLYPSKDLLPDDKEMSIFDHLEELRERIFISVLAVGAAILGCFAF 152
Query: 613 AKD 621 +KD Sbjct: 153 SKD 155
>tr|B6SIW0|B6SIW0_MAIZE Putative uncharacterized protein OS=Zea mays PE=2 SV=1 Length = 307
Score = 81.6 bits (200), Expect = 3e-14 Identities = 42/63 (66%), Positives = 49/63 (77%) Frame = +1
Query: 433 EEEDSANQGPGSLSSWLYPSKDDLPDDVEMSLFDHLDELRDRILISVAVVGVAILGCFAF 612 +EE SA L ++LYPSKD LPDD EMS+FDHL+ELR+RI ISV VG AILGCFAF Sbjct: 99 QEEQSA------LYNFLYPSKDLLPDDKEMSIFDHLEELRERIFISVLAVGAAILGCFAF 152
Query: 613 AKD 621 +KD Sbjct: 153 SKD 155
>tr|Q94G17|Q94G17_PEA TatC OS=Pisum sativum GN=tatC PE=2 SV=1 Length = 353
Score = 74.7 bits (182), Expect = 4e-12 Identities = 35/52 (67%), Positives = 44/52 (84%) Frame = +1
Query: 466 SLSSWLYPSKDDLPDDVEMSLFDHLDELRDRILISVAVVGVAILGCFAFAKD 621 ++ +LYPSK+ LPDD EMS+FDHL+ELR+RI ISV VG +ILGCFAF+KD Sbjct: 106 AIYDFLYPSKELLPDDKEMSIFDHLEELRERIFISVLGVGGSILGCFAFSKD 157
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