DK955402 |
Clone id |
TST39A01NGRL0023_A01 |
Library |
TST39 |
Length |
559 |
Definition |
Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0023_A01. 5' end sequence. |
Accession |
DK955402 |
Tissue type |
prothallia with plantlets |
Developmental stage |
gametophytes with sporophytes |
Contig ID |
CL3233Contig1 |
Sequence |
GAACAGTGTGTTTGCGCGCCCTCGCCCGGTCGTTCGTGTGTGCGGGCTTTGATGGGCGAA GACAGCGCCCCTTCTTCTACGGGTCCGCCGGGATCAAGGCTTGCAGCTGGAGATCGACAG CTTCTGATGTCGTCCGAAGATCCAGAAGACCCTCTTAAGCCCGCCGCATCTTTGAACGGA GTCAACCATGAGGCATACTCGTCAATGTTGCGGGGGTGGGTATCCAAAAAGTTCATGAGT GGATGTGTTATACTACTCCCCATTGCAATTACTTTTTATGTCACATGGTGGTTCATCCAA TTCGTTGATGGATTTTTCTCGCCAATTTATGCTCACTTGGGCATCAACATCTTTGGACTT GGTTTTGTTACTTCCATTCTTTTTATATTTTCAGTTGGTGTTTTTGTGTCCTCGTGGGTT GGAGCAAATATCTTATCTGTCGGGGAATGGTTTATTAAGCGGATGCCTTTAGTAAGGCAC ATTTATTCAGCATCCAAACAGATTAGTGCTGCAATTTCCCCAGATCAGAACACTCAGGCT TTCAAAGAAGTGGCAATTA |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q6NUP7 |
Definition |
sp|Q6NUP7|PP4R4_HUMAN Serine/threonine-protein phosphatase 4 regulatory subunit 4 OS=Homo sapiens |
Align length |
35 |
Score (bit) |
31.2 |
E-value |
3.6 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
B7FKN2 |
Definition |
tr|B7FKN2|B7FKN2_MEDTR Putative uncharacterized protein OS=Medicago truncatula |
Align length |
175 |
Score (bit) |
194.0 |
E-value |
2.0e-48 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK955402|Adiantum capillus-veneris mRNA, clone: TST39A01NGRL0023_A01, 5' (559 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|B7FKN2|B7FKN2_MEDTR Putative uncharacterized protein OS=Medic... 194 2e-48 tr|B4F859|B4F859_MAIZE Putative uncharacterized protein OS=Zea m... 194 3e-48 tr|B8LS09|B8LS09_PICSI Putative uncharacterized protein OS=Picea... 193 5e-48 tr|B4FG81|B4FG81_MAIZE Putative uncharacterized protein OS=Zea m... 193 5e-48 tr|A9NWY4|A9NWY4_PICSI Putative uncharacterized protein OS=Picea... 193 5e-48 tr|A9S686|A9S686_PHYPA Predicted protein OS=Physcomitrella paten... 191 2e-47 tr|A7PEN5|A7PEN5_VITVI Chromosome chr11 scaffold_13, whole genom... 191 2e-47 tr|Q9SL69|Q9SL69_ARATH Expressed protein (Putative membrane prot... 189 7e-47 tr|Q94EH1|Q94EH1_ARATH At2g20120/T2G17.8 OS=Arabidopsis thaliana... 189 7e-47 tr|Q0WL91|Q0WL91_ARATH Putative uncharacterized protein At2g2012... 189 7e-47 tr|A7PKX1|A7PKX1_VITVI Chromosome chr7 scaffold_20, whole genome... 186 7e-46 tr|Q8VY49|Q8VY49_ARATH Putative uncharacterized protein At2g2013... 185 1e-45 tr|Q1PCI2|Q1PCI2_SOLCH COV1-like protein OS=Solanum chacoense GN... 185 1e-45 tr|B8B069|B8B069_ORYSI Putative uncharacterized protein OS=Oryza... 185 1e-45 tr|Q65XC4|Q65XC4_ORYSJ Os05g0529000 protein OS=Oryza sativa subs... 184 3e-45 tr|Q6ERT7|Q6ERT7_ORYSJ Os02g0269000 protein OS=Oryza sativa subs... 184 4e-45 tr|B7FIP8|B7FIP8_MEDTR Putative uncharacterized protein OS=Medic... 184 4e-45 tr|A2X3A7|A2X3A7_ORYSI Putative uncharacterized protein OS=Oryza... 184 4e-45 tr|B8A2N0|B8A2N0_MAIZE Putative uncharacterized protein OS=Zea m... 180 4e-44 tr|B6SMB8|B6SMB8_MAIZE COV1-like protein OS=Zea mays PE=2 SV=1 179 9e-44 tr|B8A1R7|B8A1R7_MAIZE Putative uncharacterized protein OS=Zea m... 179 1e-43 tr|Q3EBY1|Q3EBY1_ARATH Uncharacterized protein At2g18460.2 OS=Ar... 178 2e-43 tr|B6TER1|B6TER1_MAIZE LCV3 OS=Zea mays PE=2 SV=1 178 2e-43 tr|B6SU58|B6SU58_MAIZE COV1 OS=Zea mays PE=2 SV=1 178 2e-43 tr|A3A5D8|A3A5D8_ORYSJ Putative uncharacterized protein OS=Oryza... 178 2e-43 tr|B4F8K8|B4F8K8_MAIZE Putative uncharacterized protein OS=Zea m... 177 3e-43 tr|A9SVW0|A9SVW0_PHYPA Predicted protein OS=Physcomitrella paten... 177 3e-43 tr|B4FM53|B4FM53_MAIZE Putative uncharacterized protein OS=Zea m... 177 5e-43 tr|Q8S1P4|Q8S1P4_ORYSJ cDNA clone:006-304-D06, full insert seque... 176 1e-42 tr|A2WXC4|A2WXC4_ORYSI Putative uncharacterized protein OS=Oryza... 176 1e-42
>tr|B7FKN2|B7FKN2_MEDTR Putative uncharacterized protein OS=Medicago truncatula PE=2 SV=1 Length = 265
Score = 194 bits (494), Expect = 2e-48 Identities = 102/175 (58%), Positives = 125/175 (71%), Gaps = 6/175 (3%) Frame = +1
Query: 52 MGEDSAPSSTGPPGSRLAAGDRQLLM---SSEDPEDPLKPAASLNGVNH---EAYSSMLR 213 M +D +PS+ R DR+LL+ +S D D +P AS + ++H E +S +++ Sbjct: 1 MVDDKSPSTVIGNRDR----DRELLIPVANSGDDTDASRPLASSSSMHHSGRETFSKVVQ 56
Query: 214 GWVSKKFMSGCVILLPIAITFYVTWWFIQFVDGFFSPIYAHLGINIFGLGFVTXXXXXXX 393 W SKKFM+GCVILLPIAITFY+TWWFI FVDGFFSPIYA LGI+IFGLGF+T Sbjct: 57 SWASKKFMTGCVILLPIAITFYITWWFIHFVDGFFSPIYAQLGIDIFGLGFITSITFIFL 116
Query: 394 XXXXXXXXXXANILSVGEWFIKRMPLVRHIYSASKQISAAISPDQNTQAFKEVAI 558 A++L +GEWFIKRMPLVRHIY+ASKQISAAISPDQN+QAFKEVAI Sbjct: 117 VGVFMSSWLGASVLGLGEWFIKRMPLVRHIYNASKQISAAISPDQNSQAFKEVAI 171
>tr|B4F859|B4F859_MAIZE Putative uncharacterized protein OS=Zea mays PE=2 SV=1 Length = 273
Score = 194 bits (493), Expect = 3e-48 Identities = 102/180 (56%), Positives = 120/180 (66%), Gaps = 11/180 (6%) Frame = +1
Query: 52 MGEDSAPSSTGPPGSRLAAGDRQLLM-----------SSEDPEDPLKPAASLNGVNHEAY 198 MG++ +P S P G R DR+LL+ ED + +A+L+ EA+ Sbjct: 1 MGDNKSPLSLSPMGGR--DRDRELLIPVSGGGSAPGDGVEDGDRASSASAALSSSGREAF 58
Query: 199 SSMLRGWVSKKFMSGCVILLPIAITFYVTWWFIQFVDGFFSPIYAHLGINIFGLGFVTXX 378 ++R W SKKFM+GCVIL PIAITFY+TWWFI FVDGFFSPIYA LGINIFGLGFVT Sbjct: 59 HKVVRSWASKKFMTGCVILFPIAITFYITWWFIHFVDGFFSPIYAQLGINIFGLGFVTSV 118
Query: 379 XXXXXXXXXXXXXXXANILSVGEWFIKRMPLVRHIYSASKQISAAISPDQNTQAFKEVAI 558 A++LS+GEW IKRMPLVRHIY+ASKQISAAISPDQN QAFKEV I Sbjct: 119 TFIFLIGVFMSSWLGASVLSLGEWIIKRMPLVRHIYNASKQISAAISPDQNKQAFKEVVI 178
>tr|B8LS09|B8LS09_PICSI Putative uncharacterized protein OS=Picea sitchensis PE=2 SV=1 Length = 271
Score = 193 bits (491), Expect = 5e-48 Identities = 104/179 (58%), Positives = 122/179 (68%), Gaps = 9/179 (5%) Frame = +1
Query: 49 LMGEDSAPSSTGPPGSRLAAGDRQLLMSSEDPEDP-----LKPAASLNGVNH----EAYS 201 LMG+D SS G + DR+LL+ D E+ LKP++S + ++ EA+ Sbjct: 2 LMGDDKCESSMG-------SRDRELLIPVADGEEDAEASLLKPSSSSSSSSYHPGREAFY 54
Query: 202 SMLRGWVSKKFMSGCVILLPIAITFYVTWWFIQFVDGFFSPIYAHLGINIFGLGFVTXXX 381 +LR W SKKFMSGCVIL PIAITFY+TWWFI FVDGFFSPI+A LGINIFGLGFVT Sbjct: 55 KVLRSWASKKFMSGCVILFPIAITFYITWWFIHFVDGFFSPIFAQLGINIFGLGFVTSLI 114
Query: 382 XXXXXXXXXXXXXXANILSVGEWFIKRMPLVRHIYSASKQISAAISPDQNTQAFKEVAI 558 A++L GEW IKRMPLV+HIYSASKQIS AISPD+NTQAFKEVAI Sbjct: 115 FIFLVGVSVSSWMGASVLGFGEWIIKRMPLVKHIYSASKQISTAISPDRNTQAFKEVAI 173
>tr|B4FG81|B4FG81_MAIZE Putative uncharacterized protein OS=Zea mays PE=2 SV=1 Length = 273
Score = 193 bits (491), Expect = 5e-48 Identities = 100/180 (55%), Positives = 119/180 (66%), Gaps = 11/180 (6%) Frame = +1
Query: 52 MGEDSAPSSTGPPGSRLAAGDRQLLM-----------SSEDPEDPLKPAASLNGVNHEAY 198 MG++ +P S P G R DR+LL+ ED + +A+L+ EA+ Sbjct: 1 MGDNKSPLSLSPMGGR--DRDRELLIPVSGGGSAPGVDDEDADRASSASAALSSSGREAF 58
Query: 199 SSMLRGWVSKKFMSGCVILLPIAITFYVTWWFIQFVDGFFSPIYAHLGINIFGLGFVTXX 378 ++R W SKKFM+GCVIL PIAITFY+TWWFI FVDGFFSPIYA LGINIFGLGF+T Sbjct: 59 HKVVRSWASKKFMTGCVILFPIAITFYITWWFIHFVDGFFSPIYAQLGINIFGLGFITSV 118
Query: 379 XXXXXXXXXXXXXXXANILSVGEWFIKRMPLVRHIYSASKQISAAISPDQNTQAFKEVAI 558 A++LS+GEW IKRMPLVRHIY+ASKQISAAISPDQN QAFKE I Sbjct: 119 TFIFLIGVFMSSWVGASVLSLGEWIIKRMPLVRHIYNASKQISAAISPDQNKQAFKEAVI 178
>tr|A9NWY4|A9NWY4_PICSI Putative uncharacterized protein OS=Picea sitchensis PE=2 SV=1 Length = 271
Score = 193 bits (491), Expect = 5e-48 Identities = 104/179 (58%), Positives = 122/179 (68%), Gaps = 9/179 (5%) Frame = +1
Query: 49 LMGEDSAPSSTGPPGSRLAAGDRQLLMSSEDPEDP-----LKPAASLNGVNH----EAYS 201 LMG+D SS G + DR+LL+ D E+ LKP++S + ++ EA+ Sbjct: 2 LMGDDKCESSMG-------SRDRELLIPVADGEEDAEASLLKPSSSSSSSSYHPGREAFY 54
Query: 202 SMLRGWVSKKFMSGCVILLPIAITFYVTWWFIQFVDGFFSPIYAHLGINIFGLGFVTXXX 381 +LR W SKKFMSGCVIL PIAITFY+TWWFI FVDGFFSPI+A LGINIFGLGFVT Sbjct: 55 KVLRSWASKKFMSGCVILFPIAITFYITWWFIHFVDGFFSPIFAQLGINIFGLGFVTSLV 114
Query: 382 XXXXXXXXXXXXXXANILSVGEWFIKRMPLVRHIYSASKQISAAISPDQNTQAFKEVAI 558 A++L GEW IKRMPLV+HIYSASKQIS AISPD+NTQAFKEVAI Sbjct: 115 FIFLVGVSVSSWMGASVLGFGEWIIKRMPLVKHIYSASKQISTAISPDRNTQAFKEVAI 173
>tr|A9S686|A9S686_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_209053 PE=4 SV=1 Length = 259
Score = 191 bits (485), Expect = 2e-47 Identities = 100/174 (57%), Positives = 120/174 (68%), Gaps = 5/174 (2%) Frame = +1
Query: 52 MGEDSAPSSTGPPGSRLAAGDRQLLMSS--EDPEDPLK---PAASLNGVNHEAYSSMLRG 216 MG+D A S R A DR+LLM+ +D EDP K P+ S EA+ L Sbjct: 1 MGDDKASPS------RQAGSDRELLMAGHGDDIEDPPKTGQPSPSAYHSGREAFYGFLSS 54
Query: 217 WVSKKFMSGCVILLPIAITFYVTWWFIQFVDGFFSPIYAHLGINIFGLGFVTXXXXXXXX 396 W SKKFMSGCVILLPIA+TFY+TWWFI+F D FFSP+Y +LGI++FGLGFVT Sbjct: 55 WASKKFMSGCVILLPIAVTFYITWWFIKFFDSFFSPVYDYLGIHVFGLGFVTSFVFIFLV 114
Query: 397 XXXXXXXXXANILSVGEWFIKRMPLVRHIYSASKQISAAISPDQNTQAFKEVAI 558 +++++VGEWFIKRMPLV+ +YSASKQISAAISPDQNTQAFKEVAI Sbjct: 115 GVFGASWIGSSVITVGEWFIKRMPLVKQVYSASKQISAAISPDQNTQAFKEVAI 168
>tr|A7PEN5|A7PEN5_VITVI Chromosome chr11 scaffold_13, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00016729001 PE=4 SV=1 Length = 266
Score = 191 bits (485), Expect = 2e-47 Identities = 97/156 (62%), Positives = 113/156 (72%), Gaps = 7/156 (4%) Frame = +1
Query: 112 DRQLLM----SSEDPEDPLKPAASLNGVNH---EAYSSMLRGWVSKKFMSGCVILLPIAI 270 DR+LL+ S D + KP++S + +H E + ++R W SKKFM+GCVIL PIAI Sbjct: 16 DRELLIPVSDSVNDGDASSKPSSSASSSHHPGRETFYKVVRSWASKKFMTGCVILFPIAI 75
Query: 271 TFYVTWWFIQFVDGFFSPIYAHLGINIFGLGFVTXXXXXXXXXXXXXXXXXANILSVGEW 450 TFY+TWWFI FVDGFFSPIYA LGINIFGLGF+T A++L +GEW Sbjct: 76 TFYITWWFIHFVDGFFSPIYAQLGINIFGLGFITSITFIFLVGVFMSSWLGASVLGLGEW 135
Query: 451 FIKRMPLVRHIYSASKQISAAISPDQNTQAFKEVAI 558 FIKRMP VRHIYSASKQISAAISPDQNTQAFKEVAI Sbjct: 136 FIKRMPFVRHIYSASKQISAAISPDQNTQAFKEVAI 171
>tr|Q9SL69|Q9SL69_ARATH Expressed protein (Putative membrane protein COV) (Putative uncharacterized protein) OS=Arabidopsis thaliana GN=COV PE=2 SV=1 Length = 268
Score = 189 bits (481), Expect = 7e-47 Identities = 91/143 (63%), Positives = 105/143 (73%) Frame = +1
Query: 130 SSEDPEDPLKPAASLNGVNHEAYSSMLRGWVSKKFMSGCVILLPIAITFYVTWWFIQFVD 309 SS P ++S + +HE S +RGW SKKFM+GCVILLPIAITFY+TWWFI FVD Sbjct: 33 SSSKPSSSSSASSSSHQSSHETLSLFIRGWASKKFMTGCVILLPIAITFYITWWFIHFVD 92
Query: 310 GFFSPIYAHLGINIFGLGFVTXXXXXXXXXXXXXXXXXANILSVGEWFIKRMPLVRHIYS 489 GFFSPIYA LGIN+FG GF+T A++L++GEWFIKRMP VRHIY+ Sbjct: 93 GFFSPIYAQLGINVFGFGFLTSIAFIFLVGVFMSSWLGASVLNLGEWFIKRMPFVRHIYN 152
Query: 490 ASKQISAAISPDQNTQAFKEVAI 558 ASKQIS AISPDQNTQAFKEVAI Sbjct: 153 ASKQISTAISPDQNTQAFKEVAI 175
>tr|Q94EH1|Q94EH1_ARATH At2g20120/T2G17.8 OS=Arabidopsis thaliana PE=2 SV=1 Length = 268
Score = 189 bits (481), Expect = 7e-47 Identities = 91/143 (63%), Positives = 105/143 (73%) Frame = +1
Query: 130 SSEDPEDPLKPAASLNGVNHEAYSSMLRGWVSKKFMSGCVILLPIAITFYVTWWFIQFVD 309 SS P ++S + +HE S +RGW SKKFM+GCVILLPIAITFY+TWWFI FVD Sbjct: 33 SSSKPSSSSSASSSSHQSSHETLSLFIRGWASKKFMTGCVILLPIAITFYITWWFIHFVD 92
Query: 310 GFFSPIYAHLGINIFGLGFVTXXXXXXXXXXXXXXXXXANILSVGEWFIKRMPLVRHIYS 489 GFFSPIYA LGIN+FG GF+T A++L++GEWFIKRMP VRHIY+ Sbjct: 93 GFFSPIYAQLGINVFGFGFLTSIAFIFLVGVFMSSWLGASVLNLGEWFIKRMPFVRHIYN 152
Query: 490 ASKQISAAISPDQNTQAFKEVAI 558 ASKQIS AISPDQNTQAFKEVAI Sbjct: 153 ASKQISTAISPDQNTQAFKEVAI 175
>tr|Q0WL91|Q0WL91_ARATH Putative uncharacterized protein At2g20120 OS=Arabidopsis thaliana GN=At2g20120 PE=2 SV=1 Length = 325
Score = 189 bits (481), Expect = 7e-47 Identities = 91/143 (63%), Positives = 105/143 (73%) Frame = +1
Query: 130 SSEDPEDPLKPAASLNGVNHEAYSSMLRGWVSKKFMSGCVILLPIAITFYVTWWFIQFVD 309 SS P ++S + +HE S +RGW SKKFM+GCVILLPIAITFY+TWWFI FVD Sbjct: 90 SSSKPSSSSSASSSSHQSSHETLSLFIRGWASKKFMTGCVILLPIAITFYITWWFIHFVD 149
Query: 310 GFFSPIYAHLGINIFGLGFVTXXXXXXXXXXXXXXXXXANILSVGEWFIKRMPLVRHIYS 489 GFFSPIYA LGIN+FG GF+T A++L++GEWFIKRMP VRHIY+ Sbjct: 150 GFFSPIYAQLGINVFGFGFLTSIAFIFLVGVFMSSWLGASVLNLGEWFIKRMPFVRHIYN 209
Query: 490 ASKQISAAISPDQNTQAFKEVAI 558 ASKQIS AISPDQNTQAFKEVAI Sbjct: 210 ASKQISTAISPDQNTQAFKEVAI 232
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