DK955411
Clone id TST39A01NGRL0023_A10
Library
Length 458
Definition Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0023_A10. 5' end sequence.
Accession
Tissue type prothallia with plantlets
Developmental stage gametophytes with sporophytes
Contig ID -
Sequence
GGAAGGAAGGGAGGACACAGGATCGAGCAGCTTGGCTATGGTGGCGTTGTGAGTGTTAGG
GTTTCGTTTTCTGCGTTCACAATCAAGGTAGTGGGCTTTCCGTCCTTCTGCTTGGATTTT
TAAGGCTCCGTGTCTTGCGTTTTTCTGCATAATTTCTCGAGACGTTTTTCCCGTCTGTGC
TATGCTCTGCTTCTGTGAGGGTTAAGGCATGGAGCGTGTGTACTCTGGTGGTTGAGATGT
AGCCTTGGTCACCGCATCTGCGCAAATTAAGGGTCTTCTGTTCTTTTGTGGTTGTGTTTC
TTCCTTCGCCATGGACGAGGCGTGGGAACGTGCTGTCGAGGCTGCCCGTGGCGGCGAGGA
CTTTGAAGCAGTTCGCTCTCTTACTCTGGATGGCGCAATCAAGTGCTCGCAGGGCCGGCT
GCCAGCCGCCGCTCTTCTCGAGCAATTCTCACAGCTTC
■■Homology search results ■■ -
sp_hit_id Q9SCQ7
Definition sp|Q9SCQ7|AN32_ARATH Probable acidic leucine-rich nuclear phosphoprotein 32-related protein OS=Arabidopsis thaliana
Align length 50
Score (bit) 62.8
E-value 7.0e-10
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK955411|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0023_A10, 5'
(458 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q9SCQ7|AN32_ARATH Probable acidic leucine-rich nuclear phosph... 63 7e-10
sp|Q6YSF3|AN321_ORYSJ Acidic leucine-rich nuclear phosphoprotein... 61 2e-09
sp|Q7Y180|AN322_ORYSJ Acidic leucine-rich nuclear phosphoprotein... 51 3e-06
sp|Q96GW7|PGCB_HUMAN Brevican core protein OS=Homo sapiens GN=BC... 33 0.45
sp|Q2M1K6|S39AD_RAT Zinc transporter ZIP13 OS=Rattus norvegicus ... 32 1.0
sp|Q9QXX8|NUFP1_MOUSE Nuclear fragile X mental retardation-inter... 32 1.7
sp|Q8P631|TRMB_XANCP tRNA (guanine-N(7)-)-methyltransferase OS=X... 31 2.3
sp|Q4UXY5|TRMB_XANC8 tRNA (guanine-N(7)-)-methyltransferase OS=X... 31 2.3
sp|Q6AZY7|SCAR3_HUMAN Scavenger receptor class A member 3 OS=Hom... 31 2.3
sp|Q8BZH0|S39AD_MOUSE Zinc transporter ZIP13 OS=Mus musculus GN=... 31 2.3
sp|Q5GXE4|TRMB_XANOR tRNA (guanine-N(7)-)-methyltransferase OS=X... 31 2.9
sp|Q2P0J4|TRMB_XANOM tRNA (guanine-N(7)-)-methyltransferase OS=X... 31 2.9
sp|Q3BQ14|TRMB_XANC5 tRNA (guanine-N(7)-)-methyltransferase OS=X... 31 2.9
sp|Q8PHF4|TRMB_XANAC tRNA (guanine-N(7)-)-methyltransferase OS=X... 31 2.9
sp|Q4KLH3|OGRL1_RAT Opioid growth factor receptor-like protein 1... 31 2.9
sp|Q0IHV1|INF2_XENTR Inverted formin-2 OS=Xenopus tropicalis GN=... 31 2.9
sp|P78956|RE114_SACPA Meiotic recombination protein REC114 OS=Sa... 30 3.8
sp|Q08226|CRT10_YEAST Protein CRT10 OS=Saccharomyces cerevisiae ... 30 3.8
sp|Q65SY9|NORM_MANSM Probable multidrug resistance protein norM ... 30 5.0
sp|Q9UUG0|FAS1_SCHPO Fatty acid synthase subunit beta OS=Schizos... 30 5.0
sp|Q99KF0|CAR14_MOUSE Caspase recruitment domain-containing prot... 30 5.0
sp|Q9HCM3|K1549_HUMAN UPF0606 protein KIAA1549 OS=Homo sapiens G... 30 6.6
sp|O94986|CE152_HUMAN Centrosomal protein of 152 kDa OS=Homo sap... 30 6.6
sp|Q2KYW5|TRMB_BORA1 tRNA (guanine-N(7)-)-methyltransferase OS=B... 29 8.6
sp|Q5XG24|RNPS1_XENLA RNA-binding protein with serine-rich domai... 29 8.6
sp|Q9Z1W6|LYRIC_RAT Protein LYRIC OS=Rattus norvegicus GN=Mtdh P... 29 8.6
sp|Q86UE4|LYRIC_HUMAN Protein LYRIC OS=Homo sapiens GN=MTDH PE=1... 29 8.6
sp|P32768|FLO1_YEAST Flocculation protein FLO1 OS=Saccharomyces ... 29 8.6

>sp|Q9SCQ7|AN32_ARATH Probable acidic leucine-rich nuclear
phosphoprotein 32-related protein OS=Arabidopsis
thaliana GN=At3g50690 PE=3 SV=1
Length = 447

Score = 62.8 bits (151), Expect = 7e-10
Identities = 32/50 (64%), Positives = 38/50 (76%), Gaps = 1/50 (2%)
Frame = +2

Query: 311 MDEAWERAVEAARGGE-DFEAVRSLTLDGAIKCSQGRLPAAALLEQFSQL 457
MDE WERAVEAA G+ D A R+LTLDGA+KC QGRLP ++LE+F L
Sbjct: 1 MDEIWERAVEAALDGQTDRLATRTLTLDGAVKCVQGRLPPPSVLEKFQNL 50


>sp|Q6YSF3|AN321_ORYSJ Acidic leucine-rich nuclear phosphoprotein
32-related protein 1 OS=Oryza sativa subsp. japonica
GN=Os07g0607800 PE=2 SV=1
Length = 476

Score = 61.2 bits (147), Expect = 2e-09
Identities = 32/52 (61%), Positives = 36/52 (69%), Gaps = 3/52 (5%)
Frame = +2

Query: 311 MDEAWERAVEAA---RGGEDFEAVRSLTLDGAIKCSQGRLPAAALLEQFSQL 457
MDEAWERAVEAA G RSLTLDGA+KC GRLPAA +LE++ L
Sbjct: 1 MDEAWERAVEAALQAAGEGSSSPARSLTLDGAVKCLHGRLPAAEILERYQSL 52


>sp|Q7Y180|AN322_ORYSJ Acidic leucine-rich nuclear phosphoprotein
32-related protein 2 OS=Oryza sativa subsp. japonica
GN=Os03g0668900 PE=2 SV=1
Length = 272

Score = 50.8 bits (120), Expect = 3e-06
Identities = 24/48 (50%), Positives = 33/48 (68%)
Frame = +2

Query: 314 DEAWERAVEAARGGEDFEAVRSLTLDGAIKCSQGRLPAAALLEQFSQL 457
D AWERA+ AA F A ++LTLDGA+K + GRLP+ +LL ++ L
Sbjct: 11 DAAWERAIAAAVKNAPFSAPKTLTLDGAVKSTTGRLPSPSLLGRYPSL 58


>sp|Q96GW7|PGCB_HUMAN Brevican core protein OS=Homo sapiens GN=BCAN
PE=1 SV=2
Length = 911

Score = 33.5 bits (75), Expect = 0.45
Identities = 19/48 (39%), Positives = 26/48 (54%), Gaps = 5/48 (10%)
Frame = -1

Query: 443 AREERRLAAGPAST*LRH-----PE*ESELLQSPRRHGQPRQHVPTPR 315
A +E L+ PA L+ P+ ESE + PR HG P + +PTPR
Sbjct: 500 AAQEESLSQAPARAVLQPGASPLPDGESEASRPPRVHGPPTETLPTPR 547


>sp|Q2M1K6|S39AD_RAT Zinc transporter ZIP13 OS=Rattus norvegicus
GN=Slc39a13 PE=2 SV=1
Length = 361

Score = 32.3 bits (72), Expect = 1.0
Identities = 18/43 (41%), Positives = 26/43 (60%), Gaps = 4/43 (9%)
Frame = -2

Query: 448 ELLEKSGGWQPALRALD----CAIQSKRANCFKVLAATGSLDS 332
ELLE++GG QPALR+L C + SK + + L + LD+
Sbjct: 25 ELLERAGGSQPALRSLGAAAACRLDSKESESWGALLSGERLDT 67


>sp|Q9QXX8|NUFP1_MOUSE Nuclear fragile X mental
retardation-interacting protein 1 OS=Mus musculus
GN=Nufip1 PE=1 SV=1
Length = 484

Score = 31.6 bits (70), Expect = 1.7
Identities = 19/63 (30%), Positives = 31/63 (49%)
Frame = -3

Query: 213 SMP*PSQKQSIAQTGKTSREIMQKNARHGALKIQAEGRKAHYLDCERRKRNPNTHNATIA 34
S P S KQ++ TG+T +N R+G KI + +K+H P TH+ +
Sbjct: 389 SSPPKSPKQNVQTTGRTVSRSKWENQRNGLRKISLKRKKSHC----HPLFEPRTHHPYLL 444

Query: 33 KLL 25
++L
Sbjct: 445 EML 447


>sp|Q8P631|TRMB_XANCP tRNA (guanine-N(7)-)-methyltransferase
OS=Xanthomonas campestris pv. campestris GN=trmB PE=3
SV=1
Length = 261

Score = 31.2 bits (69), Expect = 2.3
Identities = 11/22 (50%), Positives = 15/22 (68%)
Frame = -1

Query: 320 PRPWRRKKHNHKRTEDP*FAQM 255
P PW +K+HN +R P FAQ+
Sbjct: 149 PDPWHKKRHNKRRLVQPAFAQL 170


>sp|Q4UXY5|TRMB_XANC8 tRNA (guanine-N(7)-)-methyltransferase
OS=Xanthomonas campestris pv. campestris (strain 8004)
GN=trmB PE=3 SV=1
Length = 261

Score = 31.2 bits (69), Expect = 2.3
Identities = 11/22 (50%), Positives = 15/22 (68%)
Frame = -1

Query: 320 PRPWRRKKHNHKRTEDP*FAQM 255
P PW +K+HN +R P FAQ+
Sbjct: 149 PDPWHKKRHNKRRLVQPAFAQL 170


>sp|Q6AZY7|SCAR3_HUMAN Scavenger receptor class A member 3 OS=Homo
sapiens GN=SCARA3 PE=2 SV=1
Length = 606

Score = 31.2 bits (69), Expect = 2.3
Identities = 26/103 (25%), Positives = 45/103 (43%), Gaps = 11/103 (10%)
Frame = -2

Query: 427 GWQPALRALDCAIQSKRANCFKVLAATGSLDSTFPRL---VHGEGRNTTTKEQKTLNLRR 257
GWQ LD +++ C+ V AA ++ T + +HG R T +++TL L++
Sbjct: 194 GWQATTAGLDLSLKDLTQECYDVKAAVHQINFTVGQTSEWIHGIQRKT---DEETLTLQK 250

Query: 256 CGD--QGY------ISTTRVHTLHALTLTEAEHSTDGKNVSRN 152
Q Y + TT T A+ +A + +S+N
Sbjct: 251 IVTDWQNYTRLFSGLRTTSTKTGEAVKNIQATLGASSQRISQN 293


>sp|Q8BZH0|S39AD_MOUSE Zinc transporter ZIP13 OS=Mus musculus
GN=Slc39a13 PE=2 SV=1
Length = 361

Score = 31.2 bits (69), Expect = 2.3
Identities = 17/43 (39%), Positives = 26/43 (60%), Gaps = 4/43 (9%)
Frame = -2

Query: 448 ELLEKSGGWQPALRALD----CAIQSKRANCFKVLAATGSLDS 332
ELLE++GG QPALR+L C + +K + + L + LD+
Sbjct: 25 ELLERAGGSQPALRSLGAAAACRLDNKESESWGALLSGERLDT 67


tr_hit_id B7FIV4
Definition tr|B7FIV4|B7FIV4_MEDTR Putative uncharacterized protein OS=Medicago truncatula
Align length 52
Score (bit) 62.8
E-value 8.0e-09
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK955411|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0023_A10, 5'
(458 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|B7FIV4|B7FIV4_MEDTR Putative uncharacterized protein OS=Medic... 63 8e-09
tr|A7PUX1|A7PUX1_VITVI Chromosome chr4 scaffold_32, whole genome... 63 8e-09
tr|B8B8C2|B8B8C2_ORYSI Putative uncharacterized protein OS=Oryza... 61 2e-08
tr|A9NVZ4|A9NVZ4_PICSI Putative uncharacterized protein OS=Picea... 61 2e-08
tr|A3BM15|A3BM15_ORYSJ Putative uncharacterized protein OS=Oryza... 61 2e-08
tr|A7P938|A7P938_VITVI Chromosome chr3 scaffold_8, whole genome ... 59 1e-07
tr|A5BV19|A5BV19_VITVI Putative uncharacterized protein OS=Vitis... 59 1e-07
tr|A9U096|A9U096_PHYPA Predicted protein OS=Physcomitrella paten... 57 6e-07
tr|A9SU98|A9SU98_PHYPA Predicted protein OS=Physcomitrella paten... 55 1e-06
tr|A9SU96|A9SU96_PHYPA Predicted protein (Fragment) OS=Physcomit... 55 1e-06
tr|A3AL74|A3AL74_ORYSJ cDNA clone:002-142-D06, full insert seque... 51 3e-05
tr|A2XKG1|A2XKG1_ORYSI Putative uncharacterized protein OS=Oryza... 51 3e-05
tr|B6UHU4|B6UHU4_MAIZE Acidic leucine-rich nuclear phosphoprotei... 50 4e-05
tr|B6UIQ1|B6UIQ1_MAIZE Putative uncharacterized protein OS=Zea m... 49 1e-04
tr|B4FCJ2|B4FCJ2_MAIZE Putative uncharacterized protein OS=Zea m... 49 1e-04
tr|B6UH95|B6UH95_MAIZE Acidic leucine-rich nuclear phosphoprotei... 47 4e-04
tr|B6LIT2|B6LIT2_BRAFL Putative uncharacterized protein OS=Branc... 35 1.9
tr|Q0ISC2|Q0ISC2_ORYSJ Os11g0538400 protein (Fragment) OS=Oryza ... 35 2.4
tr|B6L7X4|B6L7X4_BRAFL Putative uncharacterized protein OS=Branc... 35 2.4
tr|B6L7X6|B6L7X6_BRAFL Putative uncharacterized protein OS=Branc... 34 3.2
tr|A8K144|A8K144_HUMAN cDNA FLJ76746, highly similar to Homo sap... 34 3.2
tr|B3SBM5|B3SBM5_TRIAD Putative uncharacterized protein OS=Trich... 34 4.1
tr|A6PM76|A6PM76_9BACT Alpha-L-rhamnosidase OS=Victivallis vaden... 33 5.4
tr|B3NEA9|B3NEA9_DROER GG13223 OS=Drosophila erecta GN=GG13223 P... 33 5.4
tr|Q8IWX2|Q8IWX2_HUMAN Hyaluronan binding protein (Fragment) OS=... 33 5.4
tr|Q5T3I5|Q5T3I5_HUMAN Brevican OS=Homo sapiens GN=BCAN PE=2 SV=1 33 5.4
tr|Q5SZ10|Q5SZ10_HUMAN Brevican OS=Homo sapiens GN=BCAN PE=2 SV=1 33 5.4
tr|Q59F90|Q59F90_HUMAN Brevican isoform 1 variant (Fragment) OS=... 33 5.4
tr|Q2USR7|Q2USR7_ASPOR Predicted transporter OS=Aspergillus oryz... 33 5.4
tr|B8MWW7|B8MWW7_ASPFL MFS monosaccharide transporter, putative ... 33 5.4

>tr|B7FIV4|B7FIV4_MEDTR Putative uncharacterized protein OS=Medicago
truncatula PE=2 SV=1
Length = 135

Score = 62.8 bits (151), Expect = 8e-09
Identities = 31/52 (59%), Positives = 38/52 (73%), Gaps = 1/52 (1%)
Frame = +2

Query: 305 FAMDEAWERAVEAARGGE-DFEAVRSLTLDGAIKCSQGRLPAAALLEQFSQL 457
+ MDE WE+AVE A GE D + R+LTLDGA+KC QGRLP +LLE+F L
Sbjct: 7 YLMDEIWEKAVETALEGEKDHVSARTLTLDGAVKCVQGRLPPPSLLERFQNL 58


>tr|A7PUX1|A7PUX1_VITVI Chromosome chr4 scaffold_32, whole genome
shotgun sequence OS=Vitis vinifera GN=GSVIVT00024960001
PE=4 SV=1
Length = 303

Score = 62.8 bits (151), Expect = 8e-09
Identities = 31/50 (62%), Positives = 37/50 (74%), Gaps = 1/50 (2%)
Frame = +2

Query: 311 MDEAWERAVEAARGGE-DFEAVRSLTLDGAIKCSQGRLPAAALLEQFSQL 457
MDE WERAVE A G+ D +VR+LTLDGA+KC GRLP +LLE+F L
Sbjct: 1 MDEIWERAVETALNGQTDHASVRTLTLDGAVKCVHGRLPPPSLLEKFQNL 50


>tr|B8B8C2|B8B8C2_ORYSI Putative uncharacterized protein OS=Oryza
sativa subsp. indica GN=OsI_26814 PE=4 SV=1
Length = 459

Score = 61.2 bits (147), Expect = 2e-08
Identities = 32/52 (61%), Positives = 36/52 (69%), Gaps = 3/52 (5%)
Frame = +2

Query: 311 MDEAWERAVEAA---RGGEDFEAVRSLTLDGAIKCSQGRLPAAALLEQFSQL 457
MDEAWERAVEAA G RSLTLDGA+KC GRLPAA +LE++ L
Sbjct: 1 MDEAWERAVEAALQAAGEGSSSPARSLTLDGAVKCLHGRLPAAEILERYQSL 52


>tr|A9NVZ4|A9NVZ4_PICSI Putative uncharacterized protein OS=Picea
sitchensis PE=2 SV=1
Length = 421

Score = 61.2 bits (147), Expect = 2e-08
Identities = 30/49 (61%), Positives = 39/49 (79%)
Frame = +2

Query: 311 MDEAWERAVEAARGGEDFEAVRSLTLDGAIKCSQGRLPAAALLEQFSQL 457
M++AWE+AVEAARGG++ + SLTLDGA+K + RLP AAL EQF +L
Sbjct: 1 MEKAWEKAVEAARGGQNPSEIVSLTLDGALKGTPCRLPPAALFEQFPRL 49


>tr|A3BM15|A3BM15_ORYSJ Putative uncharacterized protein OS=Oryza
sativa subsp. japonica GN=OsJ_024087 PE=4 SV=1
Length = 476

Score = 61.2 bits (147), Expect = 2e-08
Identities = 32/52 (61%), Positives = 36/52 (69%), Gaps = 3/52 (5%)
Frame = +2

Query: 311 MDEAWERAVEAA---RGGEDFEAVRSLTLDGAIKCSQGRLPAAALLEQFSQL 457
MDEAWERAVEAA G RSLTLDGA+KC GRLPAA +LE++ L
Sbjct: 1 MDEAWERAVEAALQAAGEGSSSPARSLTLDGAVKCLHGRLPAAEILERYQSL 52


>tr|A7P938|A7P938_VITVI Chromosome chr3 scaffold_8, whole genome
shotgun sequence OS=Vitis vinifera GN=GSVIVT00036413001
PE=4 SV=1
Length = 224

Score = 58.9 bits (141), Expect = 1e-07
Identities = 31/50 (62%), Positives = 34/50 (68%), Gaps = 1/50 (2%)
Frame = +2

Query: 311 MDEAWERAVEAARGGE-DFEAVRSLTLDGAIKCSQGRLPAAALLEQFSQL 457
MDE WERAVE A G+ D VRSLTLDGA+KC G LP LLE+F L
Sbjct: 1 MDEIWERAVETAIDGKTDASPVRSLTLDGAVKCYSGGLPPPTLLEKFQNL 50


>tr|A5BV19|A5BV19_VITVI Putative uncharacterized protein OS=Vitis
vinifera GN=VITISV_013705 PE=4 SV=1
Length = 344

Score = 58.9 bits (141), Expect = 1e-07
Identities = 31/50 (62%), Positives = 34/50 (68%), Gaps = 1/50 (2%)
Frame = +2

Query: 311 MDEAWERAVEAARGGE-DFEAVRSLTLDGAIKCSQGRLPAAALLEQFSQL 457
MDE WERAVE A G+ D VRSLTLDGA+KC G LP LLE+F L
Sbjct: 1 MDEIWERAVETAIDGKTDASPVRSLTLDGAVKCYSGGLPPPTLLEKFQNL 50


>tr|A9U096|A9U096_PHYPA Predicted protein OS=Physcomitrella patens
subsp. patens GN=PHYPADRAFT_153718 PE=4 SV=1
Length = 364

Score = 56.6 bits (135), Expect = 6e-07
Identities = 29/50 (58%), Positives = 35/50 (70%), Gaps = 1/50 (2%)
Frame = +2

Query: 311 MDE-AWERAVEAARGGEDFEAVRSLTLDGAIKCSQGRLPAAALLEQFSQL 457
MDE AWERAVE AR GE V +LTLDG +KC+QG+L + + FSQL
Sbjct: 4 MDEGAWERAVEQARQGEPASQVEALTLDGVVKCAQGKLLKSKVFASFSQL 53


>tr|A9SU98|A9SU98_PHYPA Predicted protein OS=Physcomitrella patens
subsp. patens GN=PHYPADRAFT_188462 PE=4 SV=1
Length = 344

Score = 55.5 bits (132), Expect = 1e-06
Identities = 27/48 (56%), Positives = 33/48 (68%)
Frame = +2

Query: 314 DEAWERAVEAARGGEDFEAVRSLTLDGAIKCSQGRLPAAALLEQFSQL 457
D AWERAVE A G+ V SLTLDG +KC+QG+LP + +L SQL
Sbjct: 6 DAAWERAVEQACHGQAAFQVESLTLDGVVKCAQGKLPKSKVLASLSQL 53


>tr|A9SU96|A9SU96_PHYPA Predicted protein (Fragment)
OS=Physcomitrella patens subsp. patens
GN=PHYPADRAFT_135388 PE=4 SV=1
Length = 278

Score = 55.5 bits (132), Expect = 1e-06
Identities = 27/48 (56%), Positives = 33/48 (68%)
Frame = +2

Query: 314 DEAWERAVEAARGGEDFEAVRSLTLDGAIKCSQGRLPAAALLEQFSQL 457
D AWERAVE A G+ V SLTLDG +KC+QG+LP + +L SQL
Sbjct: 6 DAAWERAVEQACHGQAAFQVESLTLDGVVKCAQGKLPKSKVLASLSQL 53