DK955413 |
Clone id |
TST39A01NGRL0023_A12 |
Library |
TST39 |
Length |
527 |
Definition |
Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0023_A12. 5' end sequence. |
Accession |
DK955413 |
Tissue type |
prothallia with plantlets |
Developmental stage |
gametophytes with sporophytes |
Contig ID |
CL2804Contig1 |
Sequence |
AATCAATGAAGAGCAACGCGCTACGAAGCACGCCTAGTCTCATGCTCTAGTACCGCTCGC TGGTAAATAGAATCAGACGTCAAGTTATGACTGCGCATCATATTGCTGCTTCGACACAGG CGCTACTTATCGGGACCCTTGCCCCAGGCCTCAATGCCCCGACTTGGGTGGTGTGGAACG CAGTAATGCTAGGTCTAGCCATATCCCTGTTTGCTCTTTTGTGGGTTGCGATGGGATCAA CCAGTTTTGTACTTCTCACACATGTTGTTCTTTTGATTGGTCTCGCGGGGACACTATTTG CTTTGCTAAGCTGGTTTGTTGCCGAGACGGGTTTTGTGAGTGTGGACCAGCAAATGAAAG AACTGAATCTGGGGGAAAATGGAGATGAAAACTCGAAAGTGAGTTGAGAGAAGGAAACTC AAGGCAGGAGAATGCTGATATTTATTCTTCTGCAAGCGTAAAATTTCATTTCATCATTCT TTCTGCAAGCGTACATAATTTTTTTCTATTAATTCTGTAACTTTGAA |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q06FW5 |
Definition |
sp|Q06FW5|PSAA_PELHO Photosystem I P700 chlorophyll a apoprotein A1 OS=Pelargonium hortorum |
Align length |
78 |
Score (bit) |
39.3 |
E-value |
0.012 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK955413|Adiantum capillus-veneris mRNA, clone: TST39A01NGRL0023_A12, 5' (527 letters)
Database: uniprot_sprot.fasta 412,525 sequences; 148,809,765 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
sp|Q06FW5|PSAA_PELHO Photosystem I P700 chlorophyll a apoprotein... 39 0.012 sp|P05310|PSAA_PEA Photosystem I P700 chlorophyll a apoprotein A... 39 0.012 sp|Q09MH8|PSAA_CITSI Photosystem I P700 chlorophyll a apoprotein... 39 0.015 sp|Q2PMU3|PSAA_SOYBN Photosystem I P700 chlorophyll a apoprotein... 38 0.034 sp|A4GG97|PSAA_PHAVU Photosystem I P700 chlorophyll a apoprotein... 37 0.044 sp|P06405|PSAA_TOBAC Photosystem I P700 chlorophyll a apoprotein... 37 0.058 sp|Q27S50|PSAA_SOLTU Photosystem I P700 chlorophyll a apoprotein... 37 0.058 sp|Q2MIA0|PSAA_SOLLC Photosystem I P700 chlorophyll a apoprotein... 37 0.058 sp|Q2MII7|PSAA_SOLBU Photosystem I P700 chlorophyll a apoprotein... 37 0.058 sp|A4GYR0|PSAA_POPTR Photosystem I P700 chlorophyll a apoprotein... 37 0.058 sp|Q33C36|PSAA_NICTO Photosystem I P700 chlorophyll a apoprotein... 37 0.058 sp|Q3C1H8|PSAA_NICSY Photosystem I P700 chlorophyll a apoprotein... 37 0.058 sp|Q332X8|PSAA_LACSA Photosystem I P700 chlorophyll a apoprotein... 37 0.058 sp|Q06RD1|PSAA_JASNU Photosystem I P700 chlorophyll a apoprotein... 37 0.058 sp|Q1KXV9|PSAA_HELAN Photosystem I P700 chlorophyll a apoprotein... 37 0.058 sp|A0A335|PSAA_COFAR Photosystem I P700 chlorophyll a apoprotein... 37 0.058 sp|Q8S8X4|PSAA_ATRBE Photosystem I P700 chlorophyll a apoprotein... 37 0.058 sp|P41639|PSAA_PINTH Photosystem I P700 chlorophyll a apoprotein... 37 0.076 sp|Q85WX3|PSAA_PINKO Photosystem I P700 chlorophyll a apoprotein... 37 0.076 sp|A4QJT3|PSAA_OLIPU Photosystem I P700 chlorophyll a apoprotein... 37 0.076 sp|A4QLT3|PSAA_NASOF Photosystem I P700 chlorophyll a apoprotein... 37 0.076 sp|A4QLJ4|PSAA_LOBMA Photosystem I P700 chlorophyll a apoprotein... 37 0.076 sp|A4QLA6|PSAA_LEPVR Photosystem I P700 chlorophyll a apoprotein... 37 0.076 sp|A4QL19|PSAA_DRANE Photosystem I P700 chlorophyll a apoprotein... 37 0.076 sp|A4QKJ2|PSAA_CAPBU Photosystem I P700 chlorophyll a apoprotein... 37 0.076 sp|A4QKA5|PSAA_BARVE Photosystem I P700 chlorophyll a apoprotein... 37 0.076 sp|P56766|PSAA_ARATH Photosystem I P700 chlorophyll a apoprotein... 37 0.076 sp|A4QK18|PSAA_ARAHI Photosystem I P700 chlorophyll a apoprotein... 37 0.076 sp|A4QJB5|PSAA_AETCO Photosystem I P700 chlorophyll a apoprotein... 37 0.076 sp|A4QJJ9|PSAA_AETGR Photosystem I P700 chlorophyll a apoprotein... 36 0.099
>sp|Q06FW5|PSAA_PELHO Photosystem I P700 chlorophyll a apoprotein A1 OS=Pelargonium hortorum GN=psaA PE=3 SV=1 Length = 750
Score = 39.3 bits (90), Expect = 0.012 Identities = 27/78 (34%), Positives = 37/78 (47%), Gaps = 6/78 (7%) Frame = +3
Query: 111 STQALLIGTLAPGLNAPTWVVWNAVMLGLAISLFALLWVAMGSTSFVL------LTHVVL 272 +T AL G+ APG T + W V L ALL + +G+ F++ HV L Sbjct: 486 NTHALAPGSTAPGATTGTSLTWGGVDLVAVGGKVALLPIPLGTADFLVHHIHAFTIHVTL 545
Query: 273 LIGLAGTLFALLSWFVAE 326 LI L G LFA S + + Sbjct: 546 LILLKGVLFARSSRLIPD 563
>sp|P05310|PSAA_PEA Photosystem I P700 chlorophyll a apoprotein A1 OS=Pisum sativum GN=psaA PE=1 SV=2 Length = 758
Score = 39.3 bits (90), Expect = 0.012 Identities = 27/78 (34%), Positives = 38/78 (48%), Gaps = 6/78 (7%) Frame = +3
Query: 111 STQALLIGTLAPGLNAPTWVVWNAVMLGLAISLFALLWVAMGSTSFVL------LTHVVL 272 +T AL GT APG A T + W L + ALL + +G+ F++ HV + Sbjct: 494 NTHALAPGTTAPGATASTSLTWGGGDLVAVGNKVALLPIPLGTADFLVHHIHAFTIHVTV 553
Query: 273 LIGLAGTLFALLSWFVAE 326 LI L G LFA S + + Sbjct: 554 LILLKGVLFARSSRLIPD 571
>sp|Q09MH8|PSAA_CITSI Photosystem I P700 chlorophyll a apoprotein A1 OS=Citrus sinensis GN=psaA PE=3 SV=1 Length = 750
Score = 38.9 bits (89), Expect = 0.015 Identities = 27/78 (34%), Positives = 37/78 (47%), Gaps = 6/78 (7%) Frame = +3
Query: 111 STQALLIGTLAPGLNAPTWVVWNAVMLGLAISLFALLWVAMGSTSFVL------LTHVVL 272 +T AL G APG A T + W V L ALL + +G+ F++ HV + Sbjct: 486 NTHALAPGGTAPGATASTSLTWGGVDLVAVGGKVALLPIPLGTADFLVHHIHAFTIHVTV 545
Query: 273 LIGLAGTLFALLSWFVAE 326 LI L G LFA S + + Sbjct: 546 LILLKGVLFARSSRLIPD 563
>sp|Q2PMU3|PSAA_SOYBN Photosystem I P700 chlorophyll a apoprotein A1 OS=Glycine max GN=psaA PE=3 SV=1 Length = 750
Score = 37.7 bits (86), Expect = 0.034 Identities = 26/78 (33%), Positives = 36/78 (46%), Gaps = 6/78 (7%) Frame = +3
Query: 111 STQALLIGTLAPGLNAPTWVVWNAVMLGLAISLFALLWVAMGSTSFVL------LTHVVL 272 +T AL GT APG T + W L ALL + +G+ F++ HV + Sbjct: 486 NTHALAPGTTAPGATTSTSLTWGGDNLVAVGGKVALLPIPLGTADFLVHHIHAFTIHVTV 545
Query: 273 LIGLAGTLFALLSWFVAE 326 LI L G LFA S + + Sbjct: 546 LILLKGVLFARSSRLIPD 563
>sp|A4GG97|PSAA_PHAVU Photosystem I P700 chlorophyll a apoprotein A1 OS=Phaseolus vulgaris GN=psaA PE=3 SV=1 Length = 750
Score = 37.4 bits (85), Expect = 0.044 Identities = 26/78 (33%), Positives = 36/78 (46%), Gaps = 6/78 (7%) Frame = +3
Query: 111 STQALLIGTLAPGLNAPTWVVWNAVMLGLAISLFALLWVAMGSTSFVL------LTHVVL 272 +T AL GT APG T + W L ALL + +G+ F++ HV + Sbjct: 486 NTHALAPGTTAPGAATSTSLTWGGENLVAVGGKVALLPIPLGTADFLVHHIHAFTIHVTV 545
Query: 273 LIGLAGTLFALLSWFVAE 326 LI L G LFA S + + Sbjct: 546 LILLKGVLFARSSRLIPD 563
>sp|P06405|PSAA_TOBAC Photosystem I P700 chlorophyll a apoprotein A1 OS=Nicotiana tabacum GN=psaA PE=3 SV=2 Length = 750
Score = 37.0 bits (84), Expect = 0.058 Identities = 26/78 (33%), Positives = 36/78 (46%), Gaps = 6/78 (7%) Frame = +3
Query: 111 STQALLIGTLAPGLNAPTWVVWNAVMLGLAISLFALLWVAMGSTSFVL------LTHVVL 272 +T AL G APG A T + W L ALL + +G+ F++ HV + Sbjct: 486 NTHALAPGATAPGATASTSLTWGGGDLVAVGGKVALLPIPLGTADFLVHHIHAFTIHVTV 545
Query: 273 LIGLAGTLFALLSWFVAE 326 LI L G LFA S + + Sbjct: 546 LILLKGVLFARSSRLIPD 563
>sp|Q27S50|PSAA_SOLTU Photosystem I P700 chlorophyll a apoprotein A1 OS=Solanum tuberosum GN=psaA PE=3 SV=1 Length = 750
Score = 37.0 bits (84), Expect = 0.058 Identities = 26/78 (33%), Positives = 36/78 (46%), Gaps = 6/78 (7%) Frame = +3
Query: 111 STQALLIGTLAPGLNAPTWVVWNAVMLGLAISLFALLWVAMGSTSFVL------LTHVVL 272 +T AL G APG A T + W L ALL + +G+ F++ HV + Sbjct: 486 NTHALAPGATAPGATASTSLTWGGGDLVAVGGKVALLPIPLGTADFLVHHIHAFTIHVTV 545
Query: 273 LIGLAGTLFALLSWFVAE 326 LI L G LFA S + + Sbjct: 546 LILLKGVLFARSSRLIPD 563
>sp|Q2MIA0|PSAA_SOLLC Photosystem I P700 chlorophyll a apoprotein A1 OS=Solanum lycopersicum GN=psaA PE=3 SV=1 Length = 750
Score = 37.0 bits (84), Expect = 0.058 Identities = 26/78 (33%), Positives = 36/78 (46%), Gaps = 6/78 (7%) Frame = +3
Query: 111 STQALLIGTLAPGLNAPTWVVWNAVMLGLAISLFALLWVAMGSTSFVL------LTHVVL 272 +T AL G APG A T + W L ALL + +G+ F++ HV + Sbjct: 486 NTHALAPGATAPGATASTSLTWGGGDLVAVGGKVALLPIPLGTADFLVHHIHAFTIHVTV 545
Query: 273 LIGLAGTLFALLSWFVAE 326 LI L G LFA S + + Sbjct: 546 LILLKGVLFARSSRLIPD 563
>sp|Q2MII7|PSAA_SOLBU Photosystem I P700 chlorophyll a apoprotein A1 OS=Solanum bulbocastanum GN=psaA PE=3 SV=1 Length = 750
Score = 37.0 bits (84), Expect = 0.058 Identities = 26/78 (33%), Positives = 36/78 (46%), Gaps = 6/78 (7%) Frame = +3
Query: 111 STQALLIGTLAPGLNAPTWVVWNAVMLGLAISLFALLWVAMGSTSFVL------LTHVVL 272 +T AL G APG A T + W L ALL + +G+ F++ HV + Sbjct: 486 NTHALAPGATAPGATASTSLTWGGGDLVAVGGKVALLPIPLGTADFLVHHIHAFTIHVTV 545
Query: 273 LIGLAGTLFALLSWFVAE 326 LI L G LFA S + + Sbjct: 546 LILLKGVLFARSSRLIPD 563
>sp|A4GYR0|PSAA_POPTR Photosystem I P700 chlorophyll a apoprotein A1 OS=Populus trichocarpa GN=psaA PE=3 SV=1 Length = 750
Score = 37.0 bits (84), Expect = 0.058 Identities = 26/78 (33%), Positives = 36/78 (46%), Gaps = 6/78 (7%) Frame = +3
Query: 111 STQALLIGTLAPGLNAPTWVVWNAVMLGLAISLFALLWVAMGSTSFVL------LTHVVL 272 +T AL G APG A T + W L ALL + +G+ F++ HV + Sbjct: 486 NTHALAPGATAPGATASTSLTWGGDDLVAVGGKVALLPIPLGTADFLVHHIHAFTIHVTV 545
Query: 273 LIGLAGTLFALLSWFVAE 326 LI L G LFA S + + Sbjct: 546 LILLKGVLFARSSRLIPD 563
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
Q9FZ98 |
Definition |
tr|Q9FZ98|Q9FZ98_ARATH F3H9.10 protein (Putative uncharacterized protein At1g28250) (Putative uncharacterized protein) (Putative uncharacterized protein At1g28250/F3H9_23) OS=Arabidopsis thaliana |
Align length |
91 |
Score (bit) |
85.5 |
E-value |
1.0e-15 |
Report |
|