DK955421 |
Clone id |
TST39A01NGRL0023_A21 |
Library |
TST39 |
Length |
447 |
Definition |
Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0023_A21. 5' end sequence. |
Accession |
DK955421 |
Tissue type |
prothallia with plantlets |
Developmental stage |
gametophytes with sporophytes |
Contig ID |
CL95Contig1 |
Sequence |
CCGAGGATGAAGGCGGCCTTGATTAACGATGATGCAGAAGGGCTGCGATGTCTGCTTGCT GGGGATGCTCTGTGCGCATTGAATGCCTCATGGGAGAGTCCTTTTCAACGCGTACAGCTT TTTGCGCCTACTGTGTTGCTCACAACCTACTGAGAACTTGCCAATTGGTGCTGCGAACAG TAGTGTGTGCTTGTATAAGAGGAGGTGGTCGCCTCTTTCTCTCTCCATCTAAGTCTGCCT CTTTGTCTCCATTTGAATGCGTGAGAGCATCTTGAGTGTCACTGTTGATGGCTTGCAACC GGGACAATTGTTGTTCGTGTGCTGGCAAAGCGGAAGAATTGTGCATCAGCAATGGTGATT CTCTCGGAGCTGAGAGCATGGACTTCGAAGGGGGTGAGCTCCATTGAAGGTTTTCTTTTA TTTGATGCTTTGTAAACCTATTCTGGC |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q8CIN9 |
Definition |
sp|Q8CIN9|RFFL_RAT E3 ubiquitin-protein ligase rififylin OS=Rattus norvegicus |
Align length |
65 |
Score (bit) |
31.6 |
E-value |
1.6 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
B0CPT8 |
Definition |
tr|B0CPT8|B0CPT8_LACBS Predicted protein OS=Laccaria bicolor (strain S238N-H82) |
Align length |
120 |
Score (bit) |
40.4 |
E-value |
0.044 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK955421|Adiantum capillus-veneris mRNA, clone: TST39A01NGRL0023_A21, 5' (447 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|B0CPT8|B0CPT8_LACBS Predicted protein OS=Laccaria bicolor (st... 40 0.044 tr|B0CW92|B0CW92_LACBS Predicted protein OS=Laccaria bicolor (st... 37 0.38 tr|Q4E5A5|Q4E5A5_TRYCR Putative uncharacterized protein OS=Trypa... 37 0.63 tr|A2DSH1|A2DSH1_TRIVA Putative uncharacterized protein OS=Trich... 36 0.82 tr|Q381C0|Q381C0_9TRYP Putative uncharacterized protein OS=Trypa... 35 1.4 tr|Q07Q99|Q07Q99_RHOP5 Methyl-accepting chemotaxis sensory trans... 35 2.4 tr|Q8LIH0|Q8LIH0_ORYSJ Centromere protein-like (Putative unchara... 34 3.1 tr|Q0D3H6|Q0D3H6_ORYSJ Os07g0686400 protein OS=Oryza sativa subs... 34 3.1 tr|O17969|O17969_CAEEL Protein M02G9.2, partially confirmed by t... 34 3.1 tr|B8M6I9|B8M6I9_9EURO Putative uncharacterized protein OS=Talar... 34 3.1 tr|A4HBI2|A4HBI2_LEIBR Putative uncharacterized protein OS=Leish... 34 4.1 tr|B6QUH3|B6QUH3_PENMA BZIP transcription factor, putative OS=Pe... 34 4.1 tr|A2R8I4|A2R8I4_ASPNC Contig An16c0230, complete genome OS=Aspe... 34 4.1 tr|Q10DW0|Q10DW0_ORYSJ Os03g0717900 protein OS=Oryza sativa subs... 33 5.3 tr|A3AM41|A3AM41_ORYSJ Putative uncharacterized protein OS=Oryza... 33 5.3 tr|A2XLF0|A2XLF0_ORYSI Putative uncharacterized protein OS=Oryza... 33 5.3 tr|Q55DD7|Q55DD7_DICDI Putative uncharacterized protein OS=Dicty... 33 7.0 tr|B6LDJ4|B6LDJ4_BRAFL Putative uncharacterized protein OS=Branc... 33 7.0 tr|B6KMK8|B6KMK8_TOXGO Putative uncharacterized protein OS=Toxop... 33 7.0 tr|B3KVU5|B3KVU5_HUMAN cDNA FLJ41463 fis, clone BRSTN2017237 OS=... 33 7.0 tr|Q570Z6|Q570Z6_MOUSE MKIAA4127 protein (Fragment) OS=Mus muscu... 33 9.1 tr|B2KF50|B2KF50_MOUSE UHRF1 (ICBP90) binding protein 1 OS=Mus m... 33 9.1 tr|B0KS50|B0KS50_PSEPG Amino acid adenylation domain protein OS=... 33 9.1 tr|A9HKD8|A9HKD8_9RHOB Dehydrogenase, putative OS=Roseobacter li... 33 9.1 tr|A4RTX8|A4RTX8_OSTLU Predicted protein OS=Ostreococcus lucimar... 33 9.1 tr|Q23K58|Q23K58_TETTH Putative uncharacterized protein OS=Tetra... 33 9.1 tr|B6KGI6|B6KGI6_TOXGO Putative uncharacterized protein OS=Toxop... 33 9.1 tr|B0W766|B0W766_CULQU Putative uncharacterized protein OS=Culex... 33 9.1 tr|B6Q3E0|B6Q3E0_PENMA Putative uncharacterized protein OS=Penic... 33 9.1 tr|A8PZN6|A8PZN6_MALGO Putative uncharacterized protein OS=Malas... 33 9.1
>tr|B0CPT8|B0CPT8_LACBS Predicted protein OS=Laccaria bicolor (strain S238N-H82) GN=LACBIDRAFT_186956 PE=4 SV=1 Length = 940
Score = 40.4 bits (93), Expect = 0.044 Identities = 29/120 (24%), Positives = 54/120 (45%), Gaps = 4/120 (3%) Frame = -3
Query: 430 KHQIKENLQWSSPPSKSMLSAPRESPLLMHNSSALPAHEQQLS----RLQAINSDTQDAL 263 +H + LQ + ++ S + LL + +P ++S RL + DT+D Sbjct: 557 RHVLDSELQQRACEFFALASRSDDDELLQNICEEMPPFPPRVSALLGRLNRKHGDTEDKR 616
Query: 262 THSNGDKEADLDGERKRRPPPLIQAHTTVRSTNWQVLSRL*ATQ*AQKAVRVEKDSPMRH 83 T +G KEA+LD E +R L++ + T S N ++ L + +++ SP + Sbjct: 617 TWIHGGKEANLDREATKRKTFLVENNGTASSDNQGIMDSLAGLDMSSPSIQAIGSSPQEY 676
>tr|B0CW92|B0CW92_LACBS Predicted protein OS=Laccaria bicolor (strain S238N-H82) GN=LACBIDRAFT_322427 PE=4 SV=1 Length = 194
Score = 37.4 bits (85), Expect = 0.38 Identities = 33/102 (32%), Positives = 41/102 (40%), Gaps = 4/102 (3%) Frame = -1
Query: 417 KKTFNGAH---PLRSPCSQLRENHHC*C-TILPLCQHTNNNCPGCKPSTVTLKMLSRIQM 250 K+ N AH PLR SQ HH C T + NC GC L L R Sbjct: 99 KQLVNNAHRRNPLRHKASQAPLPHHAMCETSMNRSDRRERNCCGC----ARLLGLPR--- 151
Query: 249 ETKRQT*MERERGDHLLLYKHTLLFAAPIGKFSVGCEQHSRR 124 + RQT + E G H+L + ++P G S G H R Sbjct: 152 -SPRQTLVNPEEGSHILWRREHYAGSSPFGLTSSGHRTHFTR 192
>tr|Q4E5A5|Q4E5A5_TRYCR Putative uncharacterized protein OS=Trypanosoma cruzi GN=Tc00.1047053506559.250 PE=4 SV=1 Length = 1559
Score = 36.6 bits (83), Expect = 0.63 Identities = 24/66 (36%), Positives = 33/66 (50%), Gaps = 1/66 (1%) Frame = -3
Query: 394 PPSKSMLSAPRESPLLMHNSSALPAHEQQLSRLQAINS-DTQDALTHSNGDKEADLDGER 218 PPS S+ S PR SP L +SS+ PA ++ LQAI++ D+ D GD + E Sbjct: 1179 PPSSSLASPPRSSPSLFSSSSS-PATDKHRRVLQAISTVDSSDVAALEKGDDSSPQAQEE 1237
Query: 217 KRRPPP 200 P Sbjct: 1238 TAEQEP 1243
>tr|A2DSH1|A2DSH1_TRIVA Putative uncharacterized protein OS=Trichomonas vaginalis G3 GN=TVAG_067550 PE=4 SV=1 Length = 398
Score = 36.2 bits (82), Expect = 0.82 Identities = 24/74 (32%), Positives = 37/74 (50%) Frame = -3
Query: 394 PPSKSMLSAPRESPLLMHNSSALPAHEQQLSRLQAINSDTQDALTHSNGDKEADLDGERK 215 P S S S+PR+S H SSA P++ + L N D D + S+ DK G K Sbjct: 74 PSSNSTPSSPRKSSA-KHRSSARPSNAKPLISDSKDNDDESD--SESSEDKSRPKTGGGK 130
Query: 214 RRPPPLIQAHTTVR 173 R+P +++ T ++ Sbjct: 131 RKPKKIVKKTTVIK 144
>tr|Q381C0|Q381C0_9TRYP Putative uncharacterized protein OS=Trypanosoma brucei GN=Tb11.01.8390 PE=4 SV=1 Length = 2135
Score = 35.4 bits (80), Expect = 1.4 Identities = 19/53 (35%), Positives = 29/53 (54%) Frame = -3
Query: 379 MLSAPRESPLLMHNSSALPAHEQQLSRLQAINSDTQDALTHSNGDKEADLDGE 221 +LS P SP L+ N LPA SRL ++ +A + ++GD E + +GE Sbjct: 1038 ILSNPASSPQLLLNMCKLPAPAYMGSRLPLLSMPVHNARSDTSGDVEGETNGE 1090
>tr|Q07Q99|Q07Q99_RHOP5 Methyl-accepting chemotaxis sensory transducer OS=Rhodopseudomonas palustris (strain BisA53) GN=RPE_1941 PE=3 SV=1 Length = 568
Score = 34.7 bits (78), Expect = 2.4 Identities = 15/33 (45%), Positives = 23/33 (69%) Frame = -3
Query: 394 PPSKSMLSAPRESPLLMHNSSALPAHEQQLSRL 296 PP + ++ A E+ L +HN S LPAH Q+L++L Sbjct: 63 PPPEYVIEAFLEATLALHNPSNLPAHRQRLAKL 95
>tr|Q8LIH0|Q8LIH0_ORYSJ Centromere protein-like (Putative uncharacterized protein) OS=Oryza sativa subsp. japonica GN=OJ1200_C08.114 PE=4 SV=1 Length = 860
Score = 34.3 bits (77), Expect = 3.1 Identities = 21/80 (26%), Positives = 41/80 (51%), Gaps = 5/80 (6%) Frame = -3
Query: 424 QIKENLQWSSPPSKSML-----SAPRESPLLMHNSSALPAHEQQLSRLQAINSDTQDALT 260 Q++ ++ +SSP S L S + P + N S P H + +RL + + + Sbjct: 73 QLRRSMSFSSPAGNSFLKDRSFSFSGDVPSSLFNESDAPDHVAKSTRLTNLLNKNEVLDR 132
Query: 259 HSNGDKEADLDGERKRRPPP 200 + +G++EA + GER+++ P Sbjct: 133 YIDGEQEATILGERQKQNSP 152
>tr|Q0D3H6|Q0D3H6_ORYSJ Os07g0686400 protein OS=Oryza sativa subsp. japonica GN=Os07g0686400 PE=4 SV=1 Length = 926
Score = 34.3 bits (77), Expect = 3.1 Identities = 21/80 (26%), Positives = 41/80 (51%), Gaps = 5/80 (6%) Frame = -3
Query: 424 QIKENLQWSSPPSKSML-----SAPRESPLLMHNSSALPAHEQQLSRLQAINSDTQDALT 260 Q++ ++ +SSP S L S + P + N S P H + +RL + + + Sbjct: 139 QLRRSMSFSSPAGNSFLKDRSFSFSGDVPSSLFNESDAPDHVAKSTRLTNLLNKNEVLDR 198
Query: 259 HSNGDKEADLDGERKRRPPP 200 + +G++EA + GER+++ P Sbjct: 199 YIDGEQEATILGERQKQNSP 218
>tr|O17969|O17969_CAEEL Protein M02G9.2, partially confirmed by transcript evidence OS=Caenorhabditis elegans GN=M02G9.2 PE=2 SV=3 Length = 398
Score = 34.3 bits (77), Expect = 3.1 Identities = 23/65 (35%), Positives = 27/65 (41%), Gaps = 6/65 (9%) Frame = +3
Query: 186 CACIRGGGR-LFLSPSKSASLSPFECVRAS*VSLLMACNRDN----CCS-CAGKAEELCI 347 C C G R + PS A P+ CV S L +CNR N C S C+ E C Sbjct: 65 CVCTEGNVRNIITGPSLPALFKPYNCVSTCESSCLESCNRLNFNMKCSSVCSEACEFTCA 124
Query: 348 SNGDS 362 G S Sbjct: 125 KQGTS 129
>tr|B8M6I9|B8M6I9_9EURO Putative uncharacterized protein OS=Talaromyces stipitatus ATCC 10500 GN=TSTA_027460 PE=4 SV=1 Length = 266
Score = 34.3 bits (77), Expect = 3.1 Identities = 23/70 (32%), Positives = 36/70 (51%) Frame = -3
Query: 430 KHQIKENLQWSSPPSKSMLSAPRESPLLMHNSSALPAHEQQLSRLQAINSDTQDALTHSN 251 K +++E+L SPP+ S L++P + ++ H AHE LSR + +D N Sbjct: 27 KEKMEESLD--SPPTGSPLTSPIVTIVVGHERRLFAAHEDVLSRSAFFEAALKDQFLEPN 84
Query: 250 GDKEADLDGE 221 G K+ DL E Sbjct: 85 G-KKVDLPDE 93
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