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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
DK955436
Clone id TST39A01NGRL0023_B12
Library
Length 667
Definition Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0023_B12. 5' end sequence.
Accession
Tissue type prothallia with plantlets
Developmental stage gametophytes with sporophytes
Contig ID -
Sequence 
CAGAGCTCTATCAAAGAGCAGCCAAAGGAGCAAATTTCTGAGTCGAAGCAAATTTCTGAG
GCACGCAGCGTAGCAAAAACTACTGTGGGCAGCGTAGCGCCATGCAAATCATGAAGACGT
CTCCCACTCCTACTATGCATGTTCTTCGTCGGCCAGCTTATATTGATACCGGGGTCGCCC
GTTATAAGATCGGCAGTGCTAGGGTTTCTTTTTCTGCTGCCCGCCGTATTGTTTGCAGTC
ATCAAATGCTGCCATTTAATCATTCTCATGATTCCTCCTCCAGCACATCCAATAGTACGT
CATTGCTGCGATTGCCGCTTCCTGCGCCCATTAATTGCAGGTTCCCTGTCCGCTGCCACC
CTCAGTACGAGTCTATCAAGGACGAGTGCGAGCAATGGGGCCTCTCCCTGTTCGACTCCG
GCGGCTCATCACCTGTTTCCGCTGCTGCGCGCCAAGCCTACGAGAAGGGCGTCTATTCTC
TTTTCACAGCCACCGCCTACCCCTCTCCTCGTGTATCTCCACAGCGTCTCACTTTGGGAG
CTAAGCTGTACATCTGGCTCTTCATGCTGGACGATGCCATCGATGAGGCAGATGCGCTTA
CGGCCGCTGAGCTCGGAAATGGATTCCTCCGAGTGATTACAGATACTGCCGATCTCTCGC
CTAACTC
■■Homology search results ■■ -
sp_hit_id O14335
Definition sp|O14335|SCR1_SCHPO DNA-binding protein scr1 OS=Schizosaccharomyces pombe
Align length 68
Score (bit) 32.3
E-value 2.3
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK955436|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0023_B12, 5'
         (667 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|O14335|SCR1_SCHPO DNA-binding protein scr1 OS=Schizosaccharom...    32   2.3  
sp|Q5A8A2|NPC2_CANAL Phosphatidylglycerol/phosphatidylinositol t...    32   3.9  
sp|Q15021|CND1_HUMAN Condensin complex subunit 1 OS=Homo sapiens...    32   4.0  

>sp|O14335|SCR1_SCHPO DNA-binding protein scr1
           OS=Schizosaccharomyces pombe GN=scr1 PE=2 SV=1
          Length = 565

 Score = 32.3 bits (72), Expect = 2.3
 Identities = 23/68 (33%), Positives = 29/68 (42%)
 Frame = +1

Query: 403 SPCSTPAAHHLFPLLRAKPTRRASILFSQPPPTPLLVYLHSVSLWELSCTSGSSCWTMPS 582
           SPCST  +   F      PT         P  TPL+   HS  L  +      SC  +PS
Sbjct: 393 SPCSTAPSSPTFSTRSFSPT---------PDVTPLVTPAHSPRLRPMD---DPSCVQLPS 440

Query: 583 MRQMRLRP 606
           +R + LRP
Sbjct: 441 IRSLSLRP 448


>sp|Q5A8A2|NPC2_CANAL Phosphatidylglycerol/phosphatidylinositol
           transfer protein OS=Candida albicans GN=NPC2 PE=3 SV=1
          Length = 192

 Score = 31.6 bits (70), Expect = 3.9
 Identities = 26/78 (33%), Positives = 36/78 (46%)
 Frame = +3

Query: 423 GSSPVSAAARQAYEKGVYSLFTATAYPSPRVSPQRLTLGAKLYIWLFMLDDAIDEADALT 602
           G SP+      A EK +  L      P+P V+ Q LT  A     +  LD  I+E  A  
Sbjct: 62  GDSPIEVC--DASEKQLLHLDEVIVTPNPPVAGQNLTFTA-----VGTLDKTIEEG-AYV 113

Query: 603 AAELGNGFLRVITDTADL 656
             E+  GF+++I  T DL
Sbjct: 114 EVEVRYGFIKLIHQTYDL 131


>sp|Q15021|CND1_HUMAN Condensin complex subunit 1 OS=Homo sapiens
           GN=NCAPD2 PE=1 SV=2
          Length = 1401

 Score = 31.6 bits (70), Expect = 4.0
 Identities = 20/61 (32%), Positives = 29/61 (47%), Gaps = 11/61 (18%)
 Frame = +2

Query: 353 LPPSVRVYQGRVRAMGPLPV-----RLRRLITCFRCCAPSLREG------RLFSFHSHRL 499
           LPP +R +Q   RA GPL +      +  ++  FR   P L+E       ++ S HS  L
Sbjct: 37  LPPQLRAFQAAFRAQGPLAMLQHFDTIYSILHHFRSIDPGLKEDTLEFLIKVVSRHSQEL 96

Query: 500 P 502
           P
Sbjct: 97  P 97
tr_hit_id Q3MBN2
Definition tr|Q3MBN2|Q3MBN2_ANAVT Terpene synthase, metal-binding OS=Anabaena variabilis (strain ATCC 29413 / PCC 7937)
Align length 116
Score (bit) 43.9
E-value 0.009
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK955436|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0023_B12, 5'
         (667 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|Q3MBN2|Q3MBN2_ANAVT Terpene synthase, metal-binding OS=Anabae...    44   0.009
tr|Q8YN85|Q8YN85_ANASP Alr4685 protein OS=Anabaena sp. (strain P...    42   0.045
tr|A9B3Q4|A9B3Q4_HERA2 Terpene synthase metal-binding domain pro...    42   0.045
tr|A8G9A0|A8G9A0_SERP5 Glutamine synthetase catalytic region OS=...    41   0.077
tr|B5GS26|B5GS26_STRCL Terpene synthase OS=Streptomyces clavulig...    39   0.22 
tr|B0D321|B0D321_LACBS Predicted protein OS=Laccaria bicolor (st...    38   0.49 
tr|Q82IY4|Q82IY4_STRAW Pentalenene synthase OS=Streptomyces aver...    38   0.65 
tr|A8NUX6|A8NUX6_COPC7 Putative uncharacterized protein OS=Copri...    36   1.9  
tr|Q0RR27|Q0RR27_FRAAA Putative uncharacterized protein OS=Frank...    36   2.5  
tr|B1W477|B1W477_STRGG Putative terpene cyclase OS=Streptomyces ...    36   2.5  
tr|B8PHT3|B8PHT3_9APHY Predicted protein OS=Postia placenta Mad-...    36   2.5  
tr|A1T8N1|A1T8N1_MYCVP Alcohol dehydrogenase, zinc-binding domai...    35   3.2  
tr|B8PHU2|B8PHU2_9APHY Predicted protein OS=Postia placenta Mad-...    35   3.2  
tr|A4QS52|A4QS52_MAGGR Predicted protein OS=Magnaporthe grisea G...    35   3.2  
tr|B1VN43|B1VN43_STRGG Putative germacradienol synthase OS=Strep...    35   4.2  
tr|A8NE23|A8NE23_COPC7 Predicted protein OS=Coprinopsis cinerea ...    35   4.2  
tr|Q254W1|Q254W1_CHLFF ABC transporter/periplasmic oligopeptide ...    35   5.5  
tr|B5LT04|B5LT04_PLARO Terpene synthase OS=Planobispora rosea PE...    34   7.1  
tr|B7G5Y0|B7G5Y0_PHATR Predicted protein OS=Phaeodactylum tricor...    34   7.1  

>tr|Q3MBN2|Q3MBN2_ANAVT Terpene synthase, metal-binding OS=Anabaena
           variabilis (strain ATCC 29413 / PCC 7937) GN=Ava_1982
           PE=4 SV=1
          Length = 322

 Score = 43.9 bits (102), Expect = 0.009
 Identities = 36/116 (31%), Positives = 56/116 (48%), Gaps = 6/116 (5%)
 Frame = +3

Query: 336 CRFPVRCHPQYESIKDECEQWGL--SLFDSGGSSPVSAAARQAYEKGVYSLFTATAYPSP 509
           C FP R +P  E ++D   QW +   L D       S +  Q + K  + L TA AYP  
Sbjct: 11  CPFPERKNPYSEFLQDYALQWVIRFKLID-------SESLYQRFSKAKFYLLTAGAYPHC 63

Query: 510 RVSPQRLTLGAKLYIWLFMLDDAIDEADALTAAEL----GNGFLRVITDTADLSPN 665
           ++  + L +   +  WLF+ DD  D +D     EL     N FL ++ + A+L+P+
Sbjct: 64  QL--EELKIANDVISWLFIWDDQCDISDLGKKPELLKTWCNRFLEIL-NGAELTPD 116


>tr|Q8YN85|Q8YN85_ANASP Alr4685 protein OS=Anabaena sp. (strain PCC
           7120) GN=alr4685 PE=4 SV=1
          Length = 322

 Score = 41.6 bits (96), Expect = 0.045
 Identities = 37/118 (31%), Positives = 53/118 (44%), Gaps = 9/118 (7%)
 Frame = +3

Query: 336 CRFPVRCHPQYESIKDECEQWGL--SLFDSGGSSPVSAAARQAYEKGVYSLFTATAYPSP 509
           C FP R +  +E ++D   QW L   L D       S +  Q + K  + L TA AYP  
Sbjct: 11  CPFPERKNQYFEVLQDYALQWVLRFKLID-------SESLYQRFSKAKFYLLTAGAYPHC 63

Query: 510 RVSPQRLTLGAKLYIWLFMLDDAIDEADALTAAEL----GNGFLRVITD---TADLSP 662
           ++  + L +   +  WLF+ DD  D +D     EL     N FL ++     TAD  P
Sbjct: 64  QL--EELKIANDVISWLFIWDDQCDISDLGKKPELLKIWCNRFLEILNGAELTADDLP 119


>tr|A9B3Q4|A9B3Q4_HERA2 Terpene synthase metal-binding domain
           protein OS=Herpetosiphon aurantiacus (strain ATCC 23779
           / DSM 785) GN=Haur_2988 PE=4 SV=1
          Length = 329

 Score = 41.6 bits (96), Expect = 0.045
 Identities = 27/83 (32%), Positives = 39/83 (46%)
 Frame = +3

Query: 342 FPVRCHPQYESIKDECEQWGLSLFDSGGSSPVSAAARQAYEKGVYSLFTATAYPSPRVSP 521
           FP + HP    ++ +  +W L          +S A R+A+    Y+L  A  YP   V  
Sbjct: 25  FPAQIHPLAAEVQQQTTKWVLE------QGLLSEARRKAFLDYNYTLLIARCYPYASV-- 76

Query: 522 QRLTLGAKLYIWLFMLDDAIDEA 590
           +RL + +    WLF LDD  DEA
Sbjct: 77  ERLQIISDWNAWLFELDDQCDEA 99


>tr|A8G9A0|A8G9A0_SERP5 Glutamine synthetase catalytic region
           OS=Serratia proteamaculans (strain 568) GN=Spro_0584
           PE=3 SV=1
          Length = 465

 Score = 40.8 bits (94), Expect = 0.077
 Identities = 24/55 (43%), Positives = 29/55 (52%)
 Frame = +2

Query: 302 IAAIAASCAH*LQVPCPLPPSVRVYQGRVRAMGPLPVRLRRLITCFRCCAPSLRE 466
           +A I     H L+ P PLPPS   Y+    A  PLP+  R  +T FR C P LRE
Sbjct: 380 VAIILGGLLHGLEQPLPLPPSTNGYENDSAA--PLPLNQREALTLFRRCQP-LRE 431


>tr|B5GS26|B5GS26_STRCL Terpene synthase OS=Streptomyces
           clavuligerus ATCC 27064 GN=SSCG_02150 PE=4 SV=1
          Length = 327

 Score = 39.3 bits (90), Expect = 0.22
 Identities = 21/52 (40%), Positives = 30/52 (57%)
 Frame = +3

Query: 495 AYPSPRVSPQRLTLGAKLYIWLFMLDDAIDEADALTAAELGNGFLRVITDTA 650
           A+  P+ +   LTL  K   WLF+LDD IDE+D    A+L +G L+ +   A
Sbjct: 59  AFCHPKATEDDLTLITKWMAWLFLLDDRIDESDLGRDADLLDGHLQDLQGVA 110


>tr|B0D321|B0D321_LACBS Predicted protein OS=Laccaria bicolor
           (strain S238N-H82) GN=LACBIDRAFT_315740 PE=4 SV=1
          Length = 140

 Score = 38.1 bits (87), Expect = 0.49
 Identities = 29/95 (30%), Positives = 44/95 (46%), Gaps = 2/95 (2%)
 Frame = +3

Query: 342 FPVRCHPQYESIKDECEQWGLSL--FDSGGSSPVSAAARQAYEKGVYSLFTATAYPSPRV 515
           +P R +P YE +  E + W  S   FD            QA+ +  + LFTA +YPS  +
Sbjct: 17  YPRRINPFYEEVGPETDVWVQSFKPFDK-------PEVMQAFLRCDFPLFTAFSYPS--M 67

Query: 516 SPQRLTLGAKLYIWLFMLDDAIDEADALTAAELGN 620
               L L + +    F+ D+  D AD  TA +L +
Sbjct: 68  DRDTLRLASDMLDIFFVFDEYTDVADDTTAQKLAD 102


>tr|Q82IY4|Q82IY4_STRAW Pentalenene synthase OS=Streptomyces
           avermitilis GN=ptlA PE=4 SV=1
          Length = 336

 Score = 37.7 bits (86), Expect = 0.65
 Identities = 26/91 (28%), Positives = 39/91 (42%)
 Frame = +3

Query: 312 LPLPAPINCRFPVRCHPQYESIKDECEQWGLSLFDSGGSSPVSAAARQAYEKGVYSLFTA 491
           +P     +  FP R  P +E  + +   W  +L   G     + AA + + +G Y+   A
Sbjct: 1   MPQDVDFHIPFPSRRSPDFERARADHLSWPRALGLIG-----TDAAAERHSRGGYADLAA 55

Query: 492 TAYPSPRVSPQRLTLGAKLYIWLFMLDDAID 584
             YPS   +   L LG  L  W F+ DD  D
Sbjct: 56  RFYPS--ATGADLDLGVDLMSWFFLFDDLFD 84


>tr|A8NUX6|A8NUX6_COPC7 Putative uncharacterized protein
           OS=Coprinopsis cinerea (strain Okayama-7 / 130 / FGSC
           9003) GN=CC1G_10050 PE=4 SV=1
          Length = 348

 Score = 36.2 bits (82), Expect = 1.9
 Identities = 33/110 (30%), Positives = 45/110 (40%), Gaps = 1/110 (0%)
 Frame = +3

Query: 318 LPAPIN-CRFPVRCHPQYESIKDECEQWGLSLFDSGGSSPVSAAARQAYEKGVYSLFTAT 494
           LP  +N C FP+R +P  + +    EQW L        SP  A A  A + G     TA 
Sbjct: 14  LPDLVNDCPFPLRVNPLCDEVGRLSEQWFLR---HANYSPPRAVAFMALKAGE---LTAA 67

Query: 495 AYPSPRVSPQRLTLGAKLYIWLFMLDDAIDEADALTAAELGNGFLRVITD 644
            YP        L +      +LF  DD +D+ D      L N  +R + D
Sbjct: 68  CYPD--ADAFHLRVSDDFMNFLFNADDWLDDFDIEDTYGLANCTVRALRD 115


>tr|Q0RR27|Q0RR27_FRAAA Putative uncharacterized protein OS=Frankia
           alni (strain ACN14a) GN=FRAAL1336 PE=4 SV=1
          Length = 338

 Score = 35.8 bits (81), Expect = 2.5
 Identities = 27/91 (29%), Positives = 36/91 (39%), Gaps = 1/91 (1%)
 Frame = +3

Query: 318 LPAP-INCRFPVRCHPQYESIKDECEQWGLSLFDSGGSSPVSAAARQAYEKGVYSLFTAT 494
           +P P    R P R HP  + I +    W              AAAR   +   + L  A 
Sbjct: 9   VPRPDFGIRIPERLHPAADRIGENLLSWAAEF-----GLATDAAARARLDAAGFHLAAAR 63

Query: 495 AYPSPRVSPQRLTLGAKLYIWLFMLDDAIDE 587
           + P  R     + L A+  +WLF LDD  DE
Sbjct: 64  SLPDARQDD--VELFAQWVVWLFHLDDEQDE 92


>tr|B1W477|B1W477_STRGG Putative terpene cyclase OS=Streptomyces
           griseus subsp. griseus (strain JCM 4626 / NBRC 13350)
           GN=SGR_6065 PE=4 SV=1
          Length = 339

 Score = 35.8 bits (81), Expect = 2.5
 Identities = 15/48 (31%), Positives = 27/48 (56%)
 Frame = +3

Query: 444 AARQAYEKGVYSLFTATAYPSPRVSPQRLTLGAKLYIWLFMLDDAIDE 587
           +AR  +E+  +  F    YP+     + L L A  ++WLF++DD +D+
Sbjct: 22  SARNRFEQADFGAFVGMVYPT--ADEEHLDLVADWFVWLFLVDDQLDD 67