DK955444 |
Clone id |
TST39A01NGRL0023_B20 |
Library |
TST39 |
Length |
664 |
Definition |
Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0023_B20. 5' end sequence. |
Accession |
DK955444 |
Tissue type |
prothallia with plantlets |
Developmental stage |
gametophytes with sporophytes |
Contig ID |
- |
Sequence |
TGTGAAGTGAACATACTCGACAGAAGAGATTGTAACTACGTAAAGGACGATCATAGCACA ATCCGCCTCCCCGTATACCCGCTGCTGCTGCCGCTGTTCAGAGAGAGAGAGAGAGAAAGA GAGTGAGAGAGAATGCACGAGCATCTCAACAAACCAGATCTGATGGCTTTTGAAGATTCG CACGAAGCTAGACCTTCTTCCAATGGTGTTGGCTTTGAGGTCATTCAGGCAGAGCTTGAT GAAATTGATGAAGTGTGGAAGCAGGATAGGTTTGATTCATTGCCTCATGTCGTAGAAATT CTCACTTCTCAAGTTCCTGAAGATGCCATACAAAGTCTACGAGAGCAACGAGATGCCATC GAAGATATTGTGGATGATGTTGTTCGTGGCTACCACAATGGTTTCAACAAAGCTTTCCAT AATTATTCTCAGATACTGAAAGTCTTCGGTGACTCTACTACAACTGTCAGTGCATTAAAA ACAGATCTAGATAAAGCTAAGGAGCTTCTTGGATCACGTAACAAACAGCTTCAGCAGCTA TGGTATCGATCTGTAACTTTGCGCCACATCATGTCGCTTCTTGACCAGATTGAGAATGTG TCTCAGGTGCCTAGTAGGATTGAGAAGTTTATAGCTGAAAAGCAGTATTATGCAGCTGTA CAGC |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q93YU5 |
Definition |
sp|Q93YU5|EXOC4_ARATH Probable exocyst complex component 4 OS=Arabidopsis thaliana |
Align length |
147 |
Score (bit) |
190.0 |
E-value |
5.0e-48 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A9REH7 |
Definition |
tr|A9REH7|A9REH7_PHYPA Predicted protein (Fragment) OS=Physcomitrella patens subsp. patens |
Align length |
147 |
Score (bit) |
205.0 |
E-value |
2.0e-51 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK955444|Adiantum capillus-veneris mRNA, clone: TST39A01NGRL0023_B20, 5' (664 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|A9REH7|A9REH7_PHYPA Predicted protein (Fragment) OS=Physcomit... 205 2e-51 tr|A9S4P0|A9S4P0_PHYPA Predicted protein (Fragment) OS=Physcomit... 199 2e-49 tr|A7PHZ9|A7PHZ9_VITVI Chromosome chr13 scaffold_17, whole genom... 193 7e-48 tr|Q541W5|Q541W5_ARATH Putative uncharacterized protein At3g1038... 190 6e-47 tr|A9SEB6|A9SEB6_PHYPA Predicted protein (Fragment) OS=Physcomit... 188 3e-46 tr|B7ZZU0|B7ZZU0_MAIZE Putative uncharacterized protein OS=Zea m... 185 3e-45 tr|Q69PQ1|Q69PQ1_ORYSJ Os08g0318500 protein OS=Oryza sativa subs... 182 1e-44 tr|B8B9P4|B8B9P4_ORYSI Putative uncharacterized protein OS=Oryza... 165 2e-39 tr|A8JD70|A8JD70_CHLRE Component of the exocyst complex OS=Chlam... 105 3e-21 tr|A3BRU6|A3BRU6_ORYSJ Putative uncharacterized protein OS=Oryza... 102 2e-20 tr|Q4PBF9|Q4PBF9_USTMA Putative uncharacterized protein OS=Ustil... 71 5e-11 tr|Q5TYY2|Q5TYY2_DANRE Novel protein similar to vertebrate SEC8-... 65 3e-09 tr|A4FVL2|A4FVL2_DANRE Si:ch211-92l17.2 protein OS=Danio rerio G... 65 3e-09 tr|Q9CXE1|Q9CXE1_MOUSE Putative uncharacterized protein OS=Mus m... 65 3e-09 tr|Q9CWI0|Q9CWI0_MOUSE Putative uncharacterized protein OS=Mus m... 65 3e-09 tr|Q8CAQ9|Q8CAQ9_MOUSE Putative uncharacterized protein OS=Mus m... 65 3e-09 tr|Q8CA11|Q8CA11_MOUSE Putative uncharacterized protein OS=Mus m... 65 3e-09 tr|Q8C391|Q8C391_MOUSE Putative uncharacterized protein OS=Mus m... 65 3e-09 tr|Q69ZD1|Q69ZD1_MOUSE MKIAA1699 protein (Fragment) OS=Mus muscu... 65 3e-09 tr|Q5RDN1|Q5RDN1_PONAB Putative uncharacterized protein DKFZp459... 65 3e-09 tr|A6QLD1|A6QLD1_BOVIN EXOC4 protein OS=Bos taurus GN=EXOC4 PE=2... 65 3e-09 tr|Q8TAR2|Q8TAR2_HUMAN EXOC4 protein OS=Homo sapiens GN=EXOC4 PE... 65 3e-09 tr|Q6NX51|Q6NX51_HUMAN Exocyst complex component 4 OS=Homo sapie... 65 3e-09 tr|Q541U8|Q541U8_HUMAN Putative uncharacterized protein DKFZp451... 65 3e-09 tr|A8N2C1|A8N2C1_COPC7 Putative uncharacterized protein OS=Copri... 65 4e-09 tr|Q6INJ7|Q6INJ7_XENLA LOC432278 protein (Fragment) OS=Xenopus l... 65 5e-09 tr|Q52KN6|Q52KN6_XENLA LOC779032 protein (Fragment) OS=Xenopus l... 65 5e-09 tr|Q2U7S6|Q2U7S6_ASPOR Exocyst complex subunit Sec8 OS=Aspergill... 62 3e-08 tr|B8NEI5|B8NEI5_ASPFL Exocyst complex component Sec8, putative ... 62 3e-08 tr|Q0CDB2|Q0CDB2_ASPTN Putative uncharacterized protein OS=Asper... 61 5e-08
>tr|A9REH7|A9REH7_PHYPA Predicted protein (Fragment) OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_112665 PE=4 SV=1 Length = 1058
Score = 205 bits (522), Expect = 2e-51 Identities = 97/147 (65%), Positives = 125/147 (85%) Frame = +1
Query: 223 IQAELDEIDEVWKQDRFDSLPHVVEILTSQVPEDAIQSLREQRDAIEDIVDDVVRGYHNG 402 ++ EL ID+VWKQ RFDSLPHVV +LTS+ PE A++ LREQRDAIE++VDDVVR YHNG Sbjct: 1 VKKELQNIDDVWKQPRFDSLPHVVGVLTSRNPEVALEKLREQRDAIEELVDDVVRIYHNG 60
Query: 403 FNKAFHNYSQILKVFGDSTTTVSALKTDLDKAKELLGSRNKQLQQLWYRSVTLRHIMSLL 582 FNKA HNYSQIL++F +S +++ LK DL +A+ LLG+R+KQL Q W RSVTLRH+++LL Sbjct: 61 FNKAIHNYSQILRLFSESAGSINGLKDDLGEARRLLGARHKQLHQQWCRSVTLRHVITLL 120
Query: 583 DQIENVSQVPSRIEKFIAEKQYYAAVQ 663 DQI+ V+QVP+RIEK I+EK+YY+AVQ Sbjct: 121 DQIDKVAQVPARIEKLISEKRYYSAVQ 147
>tr|A9S4P0|A9S4P0_PHYPA Predicted protein (Fragment) OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_123978 PE=4 SV=1 Length = 1023
Score = 199 bits (505), Expect = 2e-49 Identities = 95/147 (64%), Positives = 123/147 (83%) Frame = +1
Query: 223 IQAELDEIDEVWKQDRFDSLPHVVEILTSQVPEDAIQSLREQRDAIEDIVDDVVRGYHNG 402 ++ +LD ID+ WKQ RFDSLP+VVE++TS E +++ LRE RDAIE+IVD VVR YHNG Sbjct: 1 VKVQLDSIDDAWKQPRFDSLPYVVEVITSPNIEASVERLRETRDAIEEIVDGVVRHYHNG 60
Query: 403 FNKAFHNYSQILKVFGDSTTTVSALKTDLDKAKELLGSRNKQLQQLWYRSVTLRHIMSLL 582 FNKA HNYSQIL+VF +S ++ +LK DL +A++LLG+R+KQLQQ W RSVTLRH++SLL Sbjct: 61 FNKAIHNYSQILRVFSESAGSLDSLKEDLAEARKLLGARHKQLQQQWSRSVTLRHVISLL 120
Query: 583 DQIENVSQVPSRIEKFIAEKQYYAAVQ 663 D+I+ VSQVP+RIE+ AEK+YYAAVQ Sbjct: 121 DEIDKVSQVPARIERLAAEKRYYAAVQ 147
>tr|A7PHZ9|A7PHZ9_VITVI Chromosome chr13 scaffold_17, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00018142001 PE=4 SV=1 Length = 776
Score = 193 bits (491), Expect = 7e-48 Identities = 93/147 (63%), Positives = 117/147 (79%) Frame = +1
Query: 223 IQAELDEIDEVWKQDRFDSLPHVVEILTSQVPEDAIQSLREQRDAIEDIVDDVVRGYHNG 402 ++ +L IDE W RFDSLPHVV ILTS+ E Q L+EQ D IE++VD+VV YH+G Sbjct: 16 LREDLSRIDESWAAARFDSLPHVVHILTSKDREGEAQFLKEQSDIIEEVVDEVVHAYHSG 75
Query: 403 FNKAFHNYSQILKVFGDSTTTVSALKTDLDKAKELLGSRNKQLQQLWYRSVTLRHIMSLL 582 FNKA NYSQIL++F +S ++S LK DL AK+LLG+RNKQL QLWYRSVTLRHI++LL Sbjct: 76 FNKAIQNYSQILRLFSESAASISVLKVDLADAKKLLGARNKQLHQLWYRSVTLRHIIALL 135
Query: 583 DQIENVSQVPSRIEKFIAEKQYYAAVQ 663 DQ+E +++VP+RIEK IAEKQ+YAAVQ Sbjct: 136 DQVEGIAKVPARIEKLIAEKQFYAAVQ 162
>tr|Q541W5|Q541W5_ARATH Putative uncharacterized protein At3g10380/F14P13_2 OS=Arabidopsis thaliana GN=At3g10380/F14P13_2 PE=2 SV=1 Length = 1053
Score = 190 bits (483), Expect = 6e-47 Identities = 93/147 (63%), Positives = 115/147 (78%) Frame = +1
Query: 223 IQAELDEIDEVWKQDRFDSLPHVVEILTSQVPEDAIQSLREQRDAIEDIVDDVVRGYHNG 402 ++ EL IDE W RFDSLPHVV ILTS+ E I L+EQ D +E++VD+VV YH G Sbjct: 16 LREELARIDESWAAARFDSLPHVVHILTSKDREADIHILKEQSDVVEEVVDEVVHAYHGG 75
Query: 403 FNKAFHNYSQILKVFGDSTTTVSALKTDLDKAKELLGSRNKQLQQLWYRSVTLRHIMSLL 582 FNKA NYSQIL++F +ST + LK DL +AK+ LG+RNKQL QLWYRSVTLRHI+SLL Sbjct: 76 FNKAIQNYSQILRLFSESTEKIGDLKHDLAEAKQSLGARNKQLHQLWYRSVTLRHIISLL 135
Query: 583 DQIENVSQVPSRIEKFIAEKQYYAAVQ 663 DQIE +++VPSRIEK IA+KQ+YAA+Q Sbjct: 136 DQIEGIAKVPSRIEKLIADKQFYAAIQ 162
>tr|A9SEB6|A9SEB6_PHYPA Predicted protein (Fragment) OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_128369 PE=4 SV=1 Length = 1012
Score = 188 bits (477), Expect = 3e-46 Identities = 90/147 (61%), Positives = 118/147 (80%) Frame = +1
Query: 223 IQAELDEIDEVWKQDRFDSLPHVVEILTSQVPEDAIQSLREQRDAIEDIVDDVVRGYHNG 402 ++ +L+ I + WKQ RFDSLPHVVE++TS E ++ LRE RDAIE+IVD VVR YH+G Sbjct: 1 VKVQLESIGDAWKQPRFDSLPHVVEVITSPNIEASVAQLRETRDAIEEIVDSVVRIYHSG 60
Query: 403 FNKAFHNYSQILKVFGDSTTTVSALKTDLDKAKELLGSRNKQLQQLWYRSVTLRHIMSLL 582 FNKA HNYSQIL++F +S + LK L +A+ LLG+R+KQLQ+ W RSVTLRH+++LL Sbjct: 61 FNKAIHNYSQILRLFNESAEGLEGLKEGLAEARNLLGARHKQLQRQWSRSVTLRHVINLL 120
Query: 583 DQIENVSQVPSRIEKFIAEKQYYAAVQ 663 DQI+NV+QVP+RI K +AEK+YYAAVQ Sbjct: 121 DQIDNVAQVPARIVKLVAEKRYYAAVQ 147
>tr|B7ZZU0|B7ZZU0_MAIZE Putative uncharacterized protein OS=Zea mays PE=2 SV=1 Length = 1055
Score = 185 bits (469), Expect = 3e-45 Identities = 88/147 (59%), Positives = 116/147 (78%) Frame = +1
Query: 223 IQAELDEIDEVWKQDRFDSLPHVVEILTSQVPEDAIQSLREQRDAIEDIVDDVVRGYHNG 402 ++ L IDE W RFDSLPHVV ILTS+ E IQ L+EQ D IED+VD+VV YH+G Sbjct: 23 LKESLSRIDESWAVARFDSLPHVVHILTSKDREGEIQFLKEQSDLIEDVVDEVVHAYHHG 82
Query: 403 FNKAFHNYSQILKVFGDSTTTVSALKTDLDKAKELLGSRNKQLQQLWYRSVTLRHIMSLL 582 FNKA NYSQIL++F +S +++ LK ++++AK+LLG +NK L QLWYRS+TLRH++SLL Sbjct: 83 FNKAIQNYSQILRLFSESAESITGLKGEMEEAKKLLGRKNKHLGQLWYRSLTLRHVLSLL 142
Query: 583 DQIENVSQVPSRIEKFIAEKQYYAAVQ 663 DQ+E+V++VP+RIE +AEKQ YAAVQ Sbjct: 143 DQVEDVAKVPARIENLMAEKQLYAAVQ 169
>tr|Q69PQ1|Q69PQ1_ORYSJ Os08g0318500 protein OS=Oryza sativa subsp. japonica GN=P0406D01.114 PE=4 SV=1 Length = 1058
Score = 182 bits (463), Expect = 1e-44 Identities = 88/143 (61%), Positives = 113/143 (79%) Frame = +1
Query: 235 LDEIDEVWKQDRFDSLPHVVEILTSQVPEDAIQSLREQRDAIEDIVDDVVRGYHNGFNKA 414 L IDE W RFDSLPHVV ILTS+ E IQ L+EQ D IED+VD+VV YH+GFNKA Sbjct: 27 LSRIDEGWAAARFDSLPHVVHILTSKDREGEIQFLKEQSDLIEDVVDEVVHAYHHGFNKA 86
Query: 415 FHNYSQILKVFGDSTTTVSALKTDLDKAKELLGSRNKQLQQLWYRSVTLRHIMSLLDQIE 594 NYSQIL++F +S +++ LK ++ +AK+LLG +NK L QLWYRS+TLRH++SLLDQ+E Sbjct: 87 IQNYSQILRLFSESAESITGLKGEMAEAKKLLGRKNKHLGQLWYRSLTLRHVLSLLDQVE 146
Query: 595 NVSQVPSRIEKFIAEKQYYAAVQ 663 +V++VP+RIE +AEKQ YAAVQ Sbjct: 147 DVAKVPARIENLMAEKQLYAAVQ 169
>tr|B8B9P4|B8B9P4_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_28757 PE=4 SV=1 Length = 1092
Score = 165 bits (418), Expect = 2e-39 Identities = 88/177 (49%), Positives = 113/177 (63%), Gaps = 34/177 (19%) Frame = +1
Query: 235 LDEIDEVWKQDRFDSLPHVVEILTSQVPEDAIQSLREQRDAIEDIVDDVVRGYHNGFNKA 414 L IDE W RFDSLPHVV ILTS+ E IQ L+EQ D IED+VD+VV YH+GFNKA Sbjct: 27 LSRIDEGWAAARFDSLPHVVHILTSKDREGEIQFLKEQSDLIEDVVDEVVHAYHHGFNKA 86
Query: 415 FHNYSQILKVFGDSTTTVSALKTDLDKAKELLGSRNKQLQQLWYRSVTLRHIMSLLDQIE 594 NYSQIL++F +S +++ LK ++ +AK+LLG +NK L QLWYRS+TLRH++SLLDQ+E Sbjct: 87 IQNYSQILRLFSESAESITGLKGEMAEAKKLLGRKNKHLGQLWYRSLTLRHVLSLLDQVE 146
Query: 595 NVS----------------------------------QVPSRIEKFIAEKQYYAAVQ 663 +V+ +VP+RIE +AEKQ YAAVQ Sbjct: 147 DVAKADVIWKLFARKTVVSFYRYFSNFVYQIRVSKYEKVPARIENLMAEKQLYAAVQ 203
>tr|A8JD70|A8JD70_CHLRE Component of the exocyst complex OS=Chlamydomonas reinhardtii GN=SEC8 PE=4 SV=1 Length = 1203
Score = 105 bits (262), Expect = 3e-21 Identities = 54/156 (34%), Positives = 88/156 (56%) Frame = +1
Query: 193 PSSNGVGFEVIQAELDEIDEVWKQDRFDSLPHVVEILTSQVPEDAIQSLREQRDAIEDIV 372 P + V +E + E+ + +++ RF L HVVE+ +S P+ Q LR+ + + + Sbjct: 6 PPDSVVDWEAVDEEIKSVPSEYREPRFYPLKHVVEVFSSADPQGLTQELRDTSERLGAQL 65
Query: 373 DDVVRGYHNGFNKAFHNYSQILKVFGDSTTTVSALKTDLDKAKELLGSRNKQLQQLWYRS 552 D VV GYH GF ++ NYSQIL +F +S V A+K L A + LG+ ++ + W ++ Sbjct: 66 DAVVEGYHTGFARSIQNYSQILALFAESKEQVDAMKHSLADAAKQLGAHSRFMSTQWRKT 125
Query: 553 VTLRHIMSLLDQIENVSQVPSRIEKFIAEKQYYAAV 660 V+L + LL I V +VP R++ +AEK + AV Sbjct: 126 VSLESSLRLLADIRTVVEVPGRVDTALAEKDWPRAV 161
>tr|A3BRU6|A3BRU6_ORYSJ Putative uncharacterized protein OS=Oryza sativa subsp. japonica GN=OsJ_025768 PE=4 SV=1 Length = 572
Score = 102 bits (254), Expect = 2e-20 Identities = 65/145 (44%), Positives = 81/145 (55%), Gaps = 2/145 (1%) Frame = +1
Query: 235 LDEIDEVWKQDRFDSLPHVVEILTSQVPEDAIQSLREQRDAIEDIVDDVVRGYHNGFNKA 414 L IDE W RFDSLPHVV ILTS+ E IQ L+EQ D IED+VD+VV YH+GFNKA Sbjct: 27 LSRIDEGWAAARFDSLPHVVHILTSKDREGEIQFLKEQSDLIEDVVDEVVHAYHHGFNKA 86
Query: 415 FHNYSQILKVFGDSTTTVSALKTDLDKAKEL--LGSRNKQLQQLWYRSVTLRHIMSLLDQ 588 NYSQ+ D+ KA + L +R + Y S + I + Sbjct: 87 IQNYSQV---------------EDVAKADVIWKLFARKTVVSFYRYFSNFVYQI-----R 126
Query: 589 IENVSQVPSRIEKFIAEKQYYAAVQ 663 + +VP+RIE +AEKQ YAAVQ Sbjct: 127 VSKYEKVPARIENLMAEKQLYAAVQ 151
|