DK955448 |
Clone id |
TST39A01NGRL0023_B24 |
Library |
TST39 |
Length |
584 |
Definition |
Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0023_B24. 5' end sequence. |
Accession |
DK955448 |
Tissue type |
prothallia with plantlets |
Developmental stage |
gametophytes with sporophytes |
Contig ID |
CL414Contig1 |
Sequence |
CTTCTATTGACTATGGGCGATGGCAGTTTGATGAGCAAGCAATATCGAAAGACTTGATAC GAAGGGGAATGGCTGAGCCAGATGAGGATGCCGAGCATGGGCTTCGACTGCACATTGAGG ACTACCCATATGCCAAAGATGGGCTGGACTTATGGGCCGCTATCCACACATGGGTCAAGG AGTACATTTCTATCTACTATGAGAATGATACAGATGTGGAGATGGATGATGAGCTTCAGG CATGGTGGACGGAAGTGCGGGAAGTTGGACATGGAGACCACAAGGGCGCACAGTGGTGGG AAAAAATGGTTTCAAAAACTGCTCTAGTAGAGGCAATTTCTACACTCCTATGGATGGCCA CTGGCCTACACGCAGTGGCGGGGTTTGGGCAATACCCATTTGCAGGATTTATGCCCAACA GTCCAACAATGGGGAGGAGACTAATACCGGAGGAGGGCTCCAAGGAGCACAAGGAGCTGT TGGGCGATCCGAGAGCCTTCTTTCTTGCCTCATTTTCATCTCAAAGAGAGGCAACAACAG CTATGGGGACCTTTGAAATAACTTCTCAGCATATGAGTGAGGAG |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
P38417 |
Definition |
sp|P38417|LOX4_SOYBN Lipoxygenase-4 OS=Glycine max |
Align length |
194 |
Score (bit) |
211.0 |
E-value |
2.0e-54 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK955448|Adiantum capillus-veneris mRNA, clone: TST39A01NGRL0023_B24, 5' (584 letters)
Database: uniprot_sprot.fasta 412,525 sequences; 148,809,765 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
sp|P38417|LOX4_SOYBN Lipoxygenase-4 OS=Glycine max GN=LOX1.5 PE=... 211 2e-54 sp|P29250|LOX2_ORYSJ Lipoxygenase 2 OS=Oryza sativa subsp. japon... 211 2e-54 sp|P37831|LOX1_SOLTU Lipoxygenase 1 OS=Solanum tuberosum GN=LOX1... 211 3e-54 sp|Q76I22|LOX1_ORYSJ Lipoxygenase 1 OS=Oryza sativa subsp. japon... 209 8e-54 sp|P38415|LOXA_SOLLC Lipoxygenase A OS=Solanum lycopersicum GN=L... 208 2e-53 sp|Q7G794|LOX3_ORYSJ Putative lipoxygenase 3 OS=Oryza sativa sub... 207 4e-53 sp|P09439|LOX2_SOYBN Seed lipoxygenase-2 OS=Glycine max GN=LOX1.... 206 7e-53 sp|P29114|LOX1_HORVU Lipoxygenase 1 OS=Hordeum vulgare GN=LOX1.1... 205 2e-52 sp|Q06327|LOX1_ARATH Lipoxygenase 1 OS=Arabidopsis thaliana GN=L... 204 2e-52 sp|P27481|LOXB_PHAVU Lipoxygenase (Fragment) OS=Phaseolus vulgar... 204 3e-52 sp|P24095|LOXX_SOYBN Seed lipoxygenase OS=Glycine max GN=LOX1.4 ... 203 4e-52 sp|P09186|LOX3_SOYBN Seed lipoxygenase-3 OS=Glycine max GN=LOX1.... 201 2e-51 sp|P38416|LOXB_SOLLC Lipoxygenase B OS=Solanum lycopersicum GN=L... 200 4e-51 sp|P27480|LOXA_PHAVU Lipoxygenase 1 OS=Phaseolus vulgaris GN=LOX... 200 5e-51 sp|P08170|LOX1_SOYBN Seed lipoxygenase-1 OS=Glycine max GN=LOX1.... 200 5e-51 sp|P38414|LOX1_LENCU Lipoxygenase OS=Lens culinaris GN=LOX1.1 PE... 200 5e-51 sp|Q53RB0|LOX4_ORYSJ Probable lipoxygenase 4 OS=Oryza sativa sub... 199 6e-51 sp|P09918|LOX3_PEA Seed lipoxygenase-3 OS=Pisum sativum GN=LOX1.... 199 6e-51 sp|P14856|LOX2_PEA Seed lipoxygenase-2 OS=Pisum sativum GN=LOX1.... 199 1e-50 sp|Q7XV13|LOX5_ORYSJ Putative lipoxygenase 5 OS=Oryza sativa sub... 191 3e-48 sp|Q84YK8|LOXC2_ORYSJ Probable lipoxygenase 8, chloroplastic OS=... 186 7e-47 sp|P38419|LOXC1_ORYSJ Lipoxygenase 7, chloroplastic OS=Oryza sat... 186 1e-46 sp|P38418|LOXC_ARATH Lipoxygenase, chloroplastic OS=Arabidopsis ... 185 1e-46 sp|Q8H016|LOX6_ORYSJ Probable lipoxygenase 6 OS=Oryza sativa sub... 177 3e-44 sp|Q8GSM2|LOX23_HORVU Lipoxygenase 2.3, chloroplastic OS=Hordeum... 176 6e-44 sp|P93184|LOX21_HORVU Lipoxygenase 2.1, chloroplastic OS=Hordeum... 174 2e-43 sp|Q8GSM3|LOX22_HORVU Lipoxygenase 2.2, chloroplastic OS=Hordeum... 171 3e-42 sp|O16025|AOSL_PLEHO Allene oxide synthase-lipoxygenase protein ... 80 1e-14 sp|Q9BYJ1|LOXE3_HUMAN Epidermis-type lipoxygenase 3 OS=Homo sapi... 78 3e-14 sp|O35936|LX15B_MOUSE Arachidonate 15-lipoxygenase type II OS=Mu... 78 4e-14
>sp|P38417|LOX4_SOYBN Lipoxygenase-4 OS=Glycine max GN=LOX1.5 PE=1 SV=1 Length = 853
Score = 211 bits (537), Expect = 2e-54 Identities = 93/194 (47%), Positives = 133/194 (68%) Frame = +3
Query: 3 SIDYGRWQFDEQAISKDLIRRGMAEPDEDAEHGLRLHIEDYPYAKDGLDLWAAIHTWVKE 182 ++ Y W F +QA+ DL++RG+A D A HG+RL IEDYPYA DGL++W AI +WV+E Sbjct: 582 AVIYKDWVFTDQALPNDLVKRGVAVKDPSAPHGVRLLIEDYPYASDGLEIWDAIKSWVQE 641
Query: 183 YISIYYENDTDVEMDDELQAWWTEVREVGHGDHKGAQWWEKMVSKTALVEAISTLLWMAT 362 Y+S YY++D +++ D ELQAWW E+ EVGHGD K WW+KM ++ LVEA + L+W+A+ Sbjct: 642 YVSFYYKSDEELQKDPELQAWWKELVEVGHGDLKDKPWWQKMQTREELVEASAILIWIAS 701
Query: 363 GLHAVAGFGQYPFAGFMPNSPTMGRRLIPEEGSKEHKELLGDPRAFFLASFSSQREATTA 542 LHA FGQYP+ G + N PT+ RR +PE+GS E+ L +P FL + + ++E Sbjct: 702 ALHAAVNFGQYPYGGLILNRPTISRRFMPEKGSPEYDALAKNPEKEFLKTITGKKETLID 761
Query: 543 MGTFEITSQHMSEE 584 + EI S+H S+E Sbjct: 762 LTVIEILSRHASDE 775
>sp|P29250|LOX2_ORYSJ Lipoxygenase 2 OS=Oryza sativa subsp. japonica GN=LOX1.1 PE=2 SV=2 Length = 870
Score = 211 bits (537), Expect = 2e-54 Identities = 94/191 (49%), Positives = 130/191 (68%) Frame = +3
Query: 12 YGRWQFDEQAISKDLIRRGMAEPDEDAEHGLRLHIEDYPYAKDGLDLWAAIHTWVKEYIS 191 Y W F +QA+ DL++RG+A PD + + +RL IEDYPYA DGL +W AI W EY++ Sbjct: 597 YKDWSFADQALPDDLVKRGVAVPDPASPYKVRLLIEDYPYANDGLAVWHAIEQWATEYLA 656
Query: 192 IYYENDTDVEMDDELQAWWTEVREVGHGDHKGAQWWEKMVSKTALVEAISTLLWMATGLH 371 IYY ND ++ D ELQAWW EVREVGHGD K A WW +M + LV+A +T++W+ + LH Sbjct: 657 IYYPNDGVLQGDAELQAWWKEVREVGHGDIKDATWWPEMKTVAELVKACATIIWIGSALH 716
Query: 372 AVAGFGQYPFAGFMPNSPTMGRRLIPEEGSKEHKELLGDPRAFFLASFSSQREATTAMGT 551 A FGQYP+AG++PN P++ RR +PE G+KE+ EL DP F+ + + Q +A + Sbjct: 717 AAVNFGQYPYAGYLPNRPSVSRRPMPEPGTKEYDELARDPEKVFVRTITKQMQAIVGISL 776
Query: 552 FEITSQHMSEE 584 EI S+H S+E Sbjct: 777 LEILSKHSSDE 787
>sp|P37831|LOX1_SOLTU Lipoxygenase 1 OS=Solanum tuberosum GN=LOX1.1 PE=2 SV=1 Length = 861
Score = 211 bits (536), Expect = 3e-54 Identities = 89/194 (45%), Positives = 135/194 (69%) Frame = +3
Query: 3 SIDYGRWQFDEQAISKDLIRRGMAEPDEDAEHGLRLHIEDYPYAKDGLDLWAAIHTWVKE 182 ++ Y W F +QA+ DL++RG+A D + HG+RL IEDYPYA DGL++W+AI +WV + Sbjct: 591 AVVYKDWVFPDQALPADLVKRGVAVEDSSSPHGVRLLIEDYPYAVDGLEIWSAIKSWVTD 650
Query: 183 YISIYYENDTDVEMDDELQAWWTEVREVGHGDHKGAQWWEKMVSKTALVEAISTLLWMAT 362 Y S YY +D ++ D+ELQAWW E+REVGHGD K WW +M + L+++ +T++W+A+ Sbjct: 651 YCSFYYGSDEEILKDNELQAWWKELREVGHGDKKNEPWWPEMETPQELIDSCTTIIWIAS 710
Query: 363 GLHAVAGFGQYPFAGFMPNSPTMGRRLIPEEGSKEHKELLGDPRAFFLASFSSQREATTA 542 LHA FGQYP+AG++PN PT+ RR +PE G+ E++EL +P FL + ++Q + Sbjct: 711 ALHAAVNFGQYPYAGYLPNRPTVSRRFMPEPGTPEYEELKRNPDKAFLKTITAQLQTLLG 770
Query: 543 MGTFEITSQHMSEE 584 + EI S+H ++E Sbjct: 771 VSLVEILSRHTTDE 784
>sp|Q76I22|LOX1_ORYSJ Lipoxygenase 1 OS=Oryza sativa subsp. japonica GN=Os03g0699700 PE=2 SV=2 Length = 863
Score = 209 bits (532), Expect = 8e-54 Identities = 96/191 (50%), Positives = 128/191 (67%) Frame = +3
Query: 12 YGRWQFDEQAISKDLIRRGMAEPDEDAEHGLRLHIEDYPYAKDGLDLWAAIHTWVKEYIS 191 Y W F EQ + DLI+RG+A D + ++L I+DYPYA DGL +W AI WV EY + Sbjct: 590 YKNWNFTEQGLPDDLIKRGIAIKDPSSPSKVKLLIKDYPYATDGLAIWQAIEQWVTEYCA 649
Query: 192 IYYENDTDVEMDDELQAWWTEVREVGHGDHKGAQWWEKMVSKTALVEAISTLLWMATGLH 371 IYY ND ++ D ELQAWW EVREVGHGD K A WW KM S L +A +T++W+A+ LH Sbjct: 650 IYYPNDGVLQGDVELQAWWKEVREVGHGDLKDADWWPKMQSLPELTKACTTIIWIASALH 709
Query: 372 AVAGFGQYPFAGFMPNSPTMGRRLIPEEGSKEHKELLGDPRAFFLASFSSQREATTAMGT 551 A FGQYP+AG++PN PT+ RR +PE GSKE+ EL +P FF+ + +SQ + + Sbjct: 710 AAVNFGQYPYAGYLPNRPTISRRPMPEPGSKEYTELDENPEKFFIRTITSQFQTILGVSL 769
Query: 552 FEITSQHMSEE 584 EI S+H ++E Sbjct: 770 IEILSKHSADE 780
>sp|P38415|LOXA_SOLLC Lipoxygenase A OS=Solanum lycopersicum GN=LOX1.1 PE=2 SV=1 Length = 860
Score = 208 bits (529), Expect = 2e-53 Identities = 87/194 (44%), Positives = 135/194 (69%) Frame = +3
Query: 3 SIDYGRWQFDEQAISKDLIRRGMAEPDEDAEHGLRLHIEDYPYAKDGLDLWAAIHTWVKE 182 ++ Y W F +QA+ DL++RG+A D + HG+RL I+DYPYA DGL++W+AI +WV + Sbjct: 590 AVVYKDWVFPDQALPADLVKRGVAVEDSSSPHGVRLLIDDYPYAVDGLEIWSAIKSWVTD 649
Query: 183 YISIYYENDTDVEMDDELQAWWTEVREVGHGDHKGAQWWEKMVSKTALVEAISTLLWMAT 362 Y S YY ++ ++ D+ELQAWW EVREVGHGD K WW +M + L+++ +T++W+A+ Sbjct: 650 YCSFYYGSNEEILKDNELQAWWKEVREVGHGDKKNEPWWAEMETPQELIDSCTTIIWIAS 709
Query: 363 GLHAVAGFGQYPFAGFMPNSPTMGRRLIPEEGSKEHKELLGDPRAFFLASFSSQREATTA 542 LHA FGQYP+AG++PN PT+ R+ +PE G+ E++EL +P FL + ++Q + Sbjct: 710 ALHAAVNFGQYPYAGYLPNRPTVSRKFMPEPGTPEYEELKKNPDKAFLKTITAQLQTLLG 769
Query: 543 MGTFEITSQHMSEE 584 + EI S+H ++E Sbjct: 770 VSLIEILSRHTTDE 783
>sp|Q7G794|LOX3_ORYSJ Putative lipoxygenase 3 OS=Oryza sativa subsp. japonica GN=Os03g0700400 PE=3 SV=1 Length = 866
Score = 207 bits (526), Expect = 4e-53 Identities = 93/194 (47%), Positives = 132/194 (68%) Frame = +3
Query: 3 SIDYGRWQFDEQAISKDLIRRGMAEPDEDAEHGLRLHIEDYPYAKDGLDLWAAIHTWVKE 182 S+ Y W F EQ + DLI+RG+A D + + +RL I+DYPYA DGL++W AI WV E Sbjct: 590 SMVYKNWNFTEQGLPADLIKRGVAVEDATSPYKVRLLIKDYPYAADGLEIWHAIEQWVGE 649
Query: 183 YISIYYENDTDVEMDDELQAWWTEVREVGHGDHKGAQWWEKMVSKTALVEAISTLLWMAT 362 Y++IYY +D + D ELQAWW EVREVGHGD KGA WW +M + + L +A +T++W+A+ Sbjct: 650 YLAIYYTDDGVLRGDAELQAWWAEVREVGHGDLKGAAWWPRMDAVSELRDACTTIIWIAS 709
Query: 363 GLHAVAGFGQYPFAGFMPNSPTMGRRLIPEEGSKEHKELLGDPRAFFLASFSSQREATTA 542 LHA FGQYP+AG++PN PT+ RR +PE G++ + EL DP F+ + +SQ + Sbjct: 710 ALHAAVNFGQYPYAGYLPNRPTVSRRRMPEPGTEAYGELGRDPERAFIRTITSQLQTIIG 769
Query: 543 MGTFEITSQHMSEE 584 + E+ S+H S+E Sbjct: 770 ISLIEVLSKHSSDE 783
>sp|P09439|LOX2_SOYBN Seed lipoxygenase-2 OS=Glycine max GN=LOX1.2 PE=2 SV=1 Length = 865
Score = 206 bits (524), Expect = 7e-53 Identities = 93/191 (48%), Positives = 127/191 (66%) Frame = +3
Query: 12 YGRWQFDEQAISKDLIRRGMAEPDEDAEHGLRLHIEDYPYAKDGLDLWAAIHTWVKEYIS 191 Y W F +QA+ DLI+RG+A D A HGLRL IEDYPYA DGL++WAAI TWV+EY+S Sbjct: 599 YKNWVFTDQALPADLIKRGVAIKDPSAPHGLRLLIEDYPYAVDGLEIWAAIKTWVQEYVS 658
Query: 192 IYYENDTDVEMDDELQAWWTEVREVGHGDHKGAQWWEKMVSKTALVEAISTLLWMATGLH 371 +YY D DV+ D ELQ WW E E GHGD K WW K+ + LVE + ++W A+ LH Sbjct: 659 LYYARDDDVKPDSELQQWWKEAVEKGHGDLKDKPWWPKLQTIEELVEICTIIIWTASALH 718
Query: 372 AVAGFGQYPFAGFMPNSPTMGRRLIPEEGSKEHKELLGDPRAFFLASFSSQREATTAMGT 551 A FGQYP+ GF+ N PT RRL+PE+G+ E++E++ + +L + +S+ + + Sbjct: 719 AAVNFGQYPYGGFILNRPTSSRRLLPEKGTPEYEEMVKSHQKAYLRTITSKFQTLVDLSV 778
Query: 552 FEITSQHMSEE 584 EI S+H S+E Sbjct: 779 IEILSRHASDE 789
>sp|P29114|LOX1_HORVU Lipoxygenase 1 OS=Hordeum vulgare GN=LOX1.1 PE=1 SV=2 Length = 862
Score = 205 bits (521), Expect = 2e-52 Identities = 92/194 (47%), Positives = 129/194 (66%) Frame = +3
Query: 3 SIDYGRWQFDEQAISKDLIRRGMAEPDEDAEHGLRLHIEDYPYAKDGLDLWAAIHTWVKE 182 ++ Y W+F EQ + DLI+RGMA D + + +RL + DYPYA DGL +W AI +V E Sbjct: 586 AVVYKDWKFTEQGLPDDLIKRGMAVEDPSSPYKVRLLVSDYPYAADGLAIWHAIEQYVSE 645
Query: 183 YISIYYENDTDVEMDDELQAWWTEVREVGHGDHKGAQWWEKMVSKTALVEAISTLLWMAT 362 Y++IYY ND ++ D E+QAWW E REVGHGD K A WW KM S L +A +T++W+ + Sbjct: 646 YLAIYYPNDGVLQGDTEVQAWWKETREVGHGDLKDAPWWPKMQSVPELAKACTTIIWIGS 705
Query: 363 GLHAVAGFGQYPFAGFMPNSPTMGRRLIPEEGSKEHKELLGDPRAFFLASFSSQREATTA 542 LHA FGQYP+AGF+PN PT+ RR +PE G++E+ EL DP F+ + +SQ + Sbjct: 706 ALHAAVNFGQYPYAGFLPNRPTVSRRRMPEPGTEEYAELERDPERAFIHTITSQIQTIIG 765
Query: 543 MGTFEITSQHMSEE 584 + E+ S+H S+E Sbjct: 766 VSLLEVLSKHSSDE 779
>sp|Q06327|LOX1_ARATH Lipoxygenase 1 OS=Arabidopsis thaliana GN=LOX1 PE=2 SV=1 Length = 859
Score = 204 bits (520), Expect = 2e-52 Identities = 89/188 (47%), Positives = 129/188 (68%) Frame = +3
Query: 21 WQFDEQAISKDLIRRGMAEPDEDAEHGLRLHIEDYPYAKDGLDLWAAIHTWVKEYISIYY 200 W F +QA+ +L +RGMA D +A HGLRL I+DYPYA DGL++W AI +WV++YI ++Y Sbjct: 595 WTFPDQALPAELKKRGMAVEDPEAPHGLRLRIKDYPYAVDGLEVWYAIESWVRDYIFLFY 654
Query: 201 ENDTDVEMDDELQAWWTEVREVGHGDHKGAQWWEKMVSKTALVEAISTLLWMATGLHAVA 380 + + D++ D ELQAWW EVRE GHGD K WW KM ++ LVE+ + ++W+A+ LHA Sbjct: 655 KIEEDIQTDTELQAWWKEVREEGHGDKKSEPWWPKMQTREELVESCTIIIWVASALHAAV 714
Query: 381 GFGQYPFAGFMPNSPTMGRRLIPEEGSKEHKELLGDPRAFFLASFSSQREATTAMGTFEI 560 FGQYP AG++PN PT+ R+ +P+E + E +EL +P FL + ++Q + + EI Sbjct: 715 NFGQYPVAGYLPNRPTISRQYMPKENTPEFEELEKNPDKVFLKTITAQLQTLLGISLIEI 774
Query: 561 TSQHMSEE 584 S H S+E Sbjct: 775 LSTHSSDE 782
>sp|P27481|LOXB_PHAVU Lipoxygenase (Fragment) OS=Phaseolus vulgaris PE=2 SV=1 Length = 741
Score = 204 bits (519), Expect = 3e-52 Identities = 90/194 (46%), Positives = 129/194 (66%) Frame = +3
Query: 3 SIDYGRWQFDEQAISKDLIRRGMAEPDEDAEHGLRLHIEDYPYAKDGLDLWAAIHTWVKE 182 ++ Y W +QA+ DL++RG+A D A HG++L IEDYPYA DGL++W AI +WV E Sbjct: 476 AVIYKDWSLHDQALPNDLVKRGVAVKDPSAPHGVKLVIEDYPYASDGLEIWDAIKSWVVE 535
Query: 183 YISIYYENDTDVEMDDELQAWWTEVREVGHGDHKGAQWWEKMVSKTALVEAISTLLWMAT 362 Y++ YY++D ++ D ELQAWW E+ +VGHGD K WW KM S+ LVE +TL+W+A+ Sbjct: 536 YVAFYYKSDEVLQQDSELQAWWKELVQVGHGDLKDKPWWPKMQSRENLVEVSTTLIWIAS 595
Query: 363 GLHAVAGFGQYPFAGFMPNSPTMGRRLIPEEGSKEHKELLGDPRAFFLASFSSQREATTA 542 LHA FGQYP+ G + N PT+ RR +PE+GS E+ L +P FL + + ++E Sbjct: 596 ALHAAVNFGQYPYGGLILNRPTISRRFMPEKGSAEYAALAKNPEKEFLKTITGKKETLID 655
Query: 543 MGTFEITSQHMSEE 584 + EI S+H S+E Sbjct: 656 LTVIEILSRHASDE 669
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A9THN0 |
Definition |
tr|A9THN0|A9THN0_PHYPA Lipoxygenase OS=Physcomitrella patens subsp. patens |
Align length |
188 |
Score (bit) |
225.0 |
E-value |
2.0e-57 |
Report |
|