DK955453 |
Clone id |
TST39A01NGRL0023_C05 |
Library |
TST39 |
Length |
457 |
Definition |
Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0023_C05. 5' end sequence. |
Accession |
DK955453 |
Tissue type |
prothallia with plantlets |
Developmental stage |
gametophytes with sporophytes |
Contig ID |
CL384Contig1 |
Sequence |
GCCCGCCCTTGCCTTGCGAGATCTCTTCTGCGTTTTCTTGGGTGCAAAACCCTACGTGCA TAGCGCTGTGCGCACACACTAGAGGCCATAAAGCCCTAATATTAGGTATTCAGAGGTTGA AGATGATGATGCAGCCTGGAGCTGGAGTTGGCCCTTCCCCAAATGGAGTAAACATAGATC CACAACAGCAGCAGCAATGGGCTATGGCGGCACCGATGCAGGGCATGGCAGGCATGCAGC CTCAACAGCTCTACGTGCAGTGTAATGTGGCTCCAGGACCACAAAACGCCGACGATATTC GAACCCTATGGGTTGGAGATTTGCAGTTTTGGATGGACGAGAACTACATTGCAAGCTGTT TTGCCCACACAGGAGAGGTCCTGAATGTTAAAGATTATCAGGAACAAGCAGACTATGGCA TCTGAGGGGCTATGGATTTGTCGAATTTGTGTCTCAT |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
O13759 |
Definition |
sp|O13759|CSX1_SCHPO RNA-binding post-transcriptional regulator csx1 OS=Schizosaccharomyces pombe |
Align length |
36 |
Score (bit) |
37.4 |
E-value |
0.031 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK955453|Adiantum capillus-veneris mRNA, clone: TST39A01NGRL0023_C05, 5' (457 letters)
Database: uniprot_sprot.fasta 412,525 sequences; 148,809,765 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
sp|O13759|CSX1_SCHPO RNA-binding post-transcriptional regulator ... 37 0.031 sp|Q9QZI7|TSAP1_RAT tRNA selenocysteine 1-associated protein 1 O... 37 0.040 sp|Q5R462|TSAP1_PONAB tRNA selenocysteine 1-associated protein 1... 37 0.040 sp|Q80VC6|TSAP1_MOUSE tRNA selenocysteine 1-associated protein 1... 37 0.040 sp|Q9NX07|TSAP1_HUMAN tRNA selenocysteine 1-associated protein 1... 37 0.040 sp|Q1RMJ7|TSAP1_BOVIN tRNA selenocysteine 1-associated protein 1... 37 0.040 sp|Q4KM14|TSAP1_DANRE tRNA selenocysteine 1-associated protein 1... 33 0.58 sp|Q9NQZ3|DAZ1_HUMAN Deleted in azoospermia protein 1 OS=Homo sa... 30 1.4 sp|Q86SG3|DAZ4_HUMAN Deleted in azoospermia protein 4 OS=Homo sa... 30 1.4 sp|Q13117|DAZ2_HUMAN Deleted in azoospermia protein 2 OS=Homo sa... 30 1.4 sp|Q9NR90|DAZ3_HUMAN Deleted in azoospermia protein 3 OS=Homo sa... 30 1.4 sp|Q3IIM0|UVRC_PSEHT UvrABC system protein C OS=Pseudoalteromona... 31 2.9 sp|Q05469|LIPS_HUMAN Hormone-sensitive lipase OS=Homo sapiens GN... 31 2.9 sp|P23009|POL2_BPMV RNA2 polyprotein OS=Bean-pod mottle virus (s... 30 5.0 sp|O00295|TULP2_HUMAN Tubby-related protein 2 OS=Homo sapiens GN... 30 6.6 sp|O60176|YG41_SCHPO Uncharacterized RNA-binding protein C23E6.0... 29 8.4 sp|Q8TUS2|Y1682_METKA UPF0027 protein MK1682 OS=Methanopyrus kan... 29 8.4 sp|Q00916|RU17_YEAST U1 small nuclear ribonucleoprotein 70 kDa h... 29 8.4
>sp|O13759|CSX1_SCHPO RNA-binding post-transcriptional regulator csx1 OS=Schizosaccharomyces pombe GN=csx1 PE=1 SV=1 Length = 632
Score = 37.4 bits (85), Expect = 0.031 Identities = 16/36 (44%), Positives = 23/36 (63%) Frame = +3
Query: 303 TLWVGDLQFWMDENYIASCFAHTGEVLNVKDYQEQA 410 TLW+GDL+ WMD +I +A E +NVK + +A Sbjct: 86 TLWMGDLEPWMDATFIQQLWASLNEPVNVKVMRSKA 121
>sp|Q9QZI7|TSAP1_RAT tRNA selenocysteine 1-associated protein 1 OS=Rattus norvegicus GN=Trnau1ap PE=1 SV=1 Length = 287
Score = 37.0 bits (84), Expect = 0.040 Identities = 17/31 (54%), Positives = 25/31 (80%), Gaps = 1/31 (3%) Frame = +3
Query: 303 TLWVGDLQFWMDENYIASCFAHTGE-VLNVK 392 +LW+GDL+ +MDEN+I+ FA GE V++VK Sbjct: 4 SLWMGDLEPYMDENFISRAFATMGETVMSVK 34
>sp|Q5R462|TSAP1_PONAB tRNA selenocysteine 1-associated protein 1 OS=Pongo abelii GN=TRNAU1AP PE=2 SV=1 Length = 287
Score = 37.0 bits (84), Expect = 0.040 Identities = 17/31 (54%), Positives = 25/31 (80%), Gaps = 1/31 (3%) Frame = +3
Query: 303 TLWVGDLQFWMDENYIASCFAHTGE-VLNVK 392 +LW+GDL+ +MDEN+I+ FA GE V++VK Sbjct: 4 SLWMGDLEPYMDENFISRAFATMGETVMSVK 34
>sp|Q80VC6|TSAP1_MOUSE tRNA selenocysteine 1-associated protein 1 OS=Mus musculus GN=Trnau1ap PE=1 SV=2 Length = 287
Score = 37.0 bits (84), Expect = 0.040 Identities = 17/31 (54%), Positives = 25/31 (80%), Gaps = 1/31 (3%) Frame = +3
Query: 303 TLWVGDLQFWMDENYIASCFAHTGE-VLNVK 392 +LW+GDL+ +MDEN+I+ FA GE V++VK Sbjct: 4 SLWMGDLEPYMDENFISRAFATMGETVMSVK 34
>sp|Q9NX07|TSAP1_HUMAN tRNA selenocysteine 1-associated protein 1 OS=Homo sapiens GN=TRNAU1AP PE=1 SV=1 Length = 287
Score = 37.0 bits (84), Expect = 0.040 Identities = 17/31 (54%), Positives = 25/31 (80%), Gaps = 1/31 (3%) Frame = +3
Query: 303 TLWVGDLQFWMDENYIASCFAHTGE-VLNVK 392 +LW+GDL+ +MDEN+I+ FA GE V++VK Sbjct: 4 SLWMGDLEPYMDENFISRAFATMGETVMSVK 34
>sp|Q1RMJ7|TSAP1_BOVIN tRNA selenocysteine 1-associated protein 1 OS=Bos taurus GN=TRNAU1AP PE=2 SV=1 Length = 287
Score = 37.0 bits (84), Expect = 0.040 Identities = 17/31 (54%), Positives = 25/31 (80%), Gaps = 1/31 (3%) Frame = +3
Query: 303 TLWVGDLQFWMDENYIASCFAHTGE-VLNVK 392 +LW+GDL+ +MDEN+I+ FA GE V++VK Sbjct: 4 SLWMGDLEPYMDENFISRAFATMGETVMSVK 34
>sp|Q4KM14|TSAP1_DANRE tRNA selenocysteine 1-associated protein 1 OS=Danio rerio GN=trnau1ap PE=2 SV=1 Length = 316
Score = 33.1 bits (74), Expect = 0.58 Identities = 13/25 (52%), Positives = 18/25 (72%) Frame = +3
Query: 303 TLWVGDLQFWMDENYIASCFAHTGE 377 +LW+GDL +MDEN+I F+ GE Sbjct: 7 SLWMGDLDPYMDENFIKQAFSTMGE 31
>sp|Q9NQZ3|DAZ1_HUMAN Deleted in azoospermia protein 1 OS=Homo sapiens GN=DAZ1 PE=1 SV=2 Length = 744
Score = 29.6 bits (65), Expect(2) = 1.4 Identities = 14/30 (46%), Positives = 17/30 (56%) Frame = +3
Query: 303 TLWVGDLQFWMDENYIASCFAHTGEVLNVK 392 T++VG + MDE I SCF G V VK Sbjct: 41 TVFVGGIDARMDETEIGSCFGRYGSVKEVK 70
Score = 29.6 bits (65), Expect(2) = 1.4 Identities = 14/30 (46%), Positives = 17/30 (56%) Frame = +3
Query: 303 TLWVGDLQFWMDENYIASCFAHTGEVLNVK 392 T++VG + MDE I SCF G V VK Sbjct: 206 TVFVGGIDARMDETEIGSCFGRYGSVKEVK 235
Score = 29.6 bits (65), Expect(2) = 1.4 Identities = 14/30 (46%), Positives = 17/30 (56%) Frame = +3
Query: 303 TLWVGDLQFWMDENYIASCFAHTGEVLNVK 392 T++VG + MDE I SCF G V VK Sbjct: 371 TVFVGGIDARMDETEIGSCFGRYGSVKEVK 400
Score = 21.9 bits (45), Expect(2) = 1.4 Identities = 9/17 (52%), Positives = 12/17 (70%) Frame = +2
Query: 404 TSRLWHLRGYGFVEFVS 454 T+R +GYGFV FV+ Sbjct: 73 TNRTGVSKGYGFVSFVN 89
Score = 21.9 bits (45), Expect(2) = 1.4 Identities = 9/17 (52%), Positives = 12/17 (70%) Frame = +2
Query: 404 TSRLWHLRGYGFVEFVS 454 T+R +GYGFV FV+ Sbjct: 238 TNRTGVSKGYGFVSFVN 254
Score = 21.9 bits (45), Expect(2) = 1.4 Identities = 9/17 (52%), Positives = 12/17 (70%) Frame = +2
Query: 404 TSRLWHLRGYGFVEFVS 454 T+R +GYGFV FV+ Sbjct: 403 TNRTGVSKGYGFVSFVN 419
>sp|Q86SG3|DAZ4_HUMAN Deleted in azoospermia protein 4 OS=Homo sapiens GN=DAZ4 PE=1 SV=2 Length = 579
Score = 29.6 bits (65), Expect(2) = 1.4 Identities = 14/30 (46%), Positives = 17/30 (56%) Frame = +3
Query: 303 TLWVGDLQFWMDENYIASCFAHTGEVLNVK 392 T++VG + MDE I SCF G V VK Sbjct: 41 TVFVGGIDARMDETEIGSCFGRYGSVKEVK 70
Score = 29.6 bits (65), Expect(2) = 1.4 Identities = 14/30 (46%), Positives = 17/30 (56%) Frame = +3
Query: 303 TLWVGDLQFWMDENYIASCFAHTGEVLNVK 392 T++VG + MDE I SCF G V VK Sbjct: 206 TVFVGGIDARMDETEIGSCFGRYGSVKEVK 235
Score = 21.9 bits (45), Expect(2) = 1.4 Identities = 9/17 (52%), Positives = 12/17 (70%) Frame = +2
Query: 404 TSRLWHLRGYGFVEFVS 454 T+R +GYGFV FV+ Sbjct: 73 TNRTGVSKGYGFVSFVN 89
Score = 21.9 bits (45), Expect(2) = 1.4 Identities = 9/17 (52%), Positives = 12/17 (70%) Frame = +2
Query: 404 TSRLWHLRGYGFVEFVS 454 T+R +GYGFV FV+ Sbjct: 238 TNRTGVSKGYGFVSFVN 254
>sp|Q13117|DAZ2_HUMAN Deleted in azoospermia protein 2 OS=Homo sapiens GN=DAZ2 PE=1 SV=3 Length = 558
Score = 29.6 bits (65), Expect(2) = 1.4 Identities = 14/30 (46%), Positives = 17/30 (56%) Frame = +3
Query: 303 TLWVGDLQFWMDENYIASCFAHTGEVLNVK 392 T++VG + MDE I SCF G V VK Sbjct: 41 TVFVGGIDARMDETEIGSCFGRYGSVKEVK 70
Score = 21.9 bits (45), Expect(2) = 1.4 Identities = 9/17 (52%), Positives = 12/17 (70%) Frame = +2
Query: 404 TSRLWHLRGYGFVEFVS 454 T+R +GYGFV FV+ Sbjct: 73 TNRTGVSKGYGFVSFVN 89
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A7R0L9 |
Definition |
tr|A7R0L9|A7R0L9_VITVI Chromosome chr10 scaffold_312, whole genome shotgun sequence OS=Vitis vinifera |
Align length |
38 |
Score (bit) |
70.9 |
E-value |
1.0e-12 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK955453|Adiantum capillus-veneris mRNA, clone: TST39A01NGRL0023_C05, 5' (457 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|A7R0L9|A7R0L9_VITVI Chromosome chr10 scaffold_312, whole geno... 71 1e-12 tr|Q2PF40|Q2PF40_TRIPR Putative DNA binding protein OS=Trifolium... 71 1e-12 tr|A7NZS1|A7NZS1_VITVI Chromosome chr6 scaffold_3, whole genome ... 68 7e-12 tr|A9TZW4|A9TZW4_PHYPA Predicted protein OS=Physcomitrella paten... 63 1e-11 tr|A9TFH5|A9TFH5_PHYPA Predicted protein (Fragment) OS=Physcomit... 63 1e-11 tr|Q9SAB3|Q9SAB3_ARATH F25C20.21 protein (At1g11650) (Similar to... 67 1e-11 tr|Q8LBV8|Q8LBV8_ARATH Putative DNA binding protein OS=Arabidops... 67 1e-11 tr|Q3EDE3|Q3EDE3_ARATH Uncharacterized protein At1g11650.1 OS=Ar... 67 1e-11 tr|B6UA93|B6UA93_MAIZE RNA-binding post-transcriptional regulato... 65 2e-11 tr|Q2PEV8|Q2PEV8_TRIPR Putative DNA binding protein (Fragment) O... 66 6e-11 tr|B4FEA4|B4FEA4_MAIZE Putative uncharacterized protein OS=Zea m... 67 8e-11 tr|Q8VXZ9|Q8VXZ9_ARATH Putative DNA binding protein ACBF OS=Arab... 65 1e-10 tr|B4FTW4|B4FTW4_MAIZE Putative uncharacterized protein OS=Zea m... 65 1e-10 tr|B4FVM1|B4FVM1_MAIZE Putative uncharacterized protein OS=Zea m... 65 1e-10 tr|Q0DUQ0|Q0DUQ0_ORYSJ Os03g0174100 protein (Fragment) OS=Oryza ... 63 1e-10 tr|Q10R21|Q10R21_ORYSJ cDNA clone:J013000M06, full insert sequen... 63 1e-10 tr|B8APB9|B8APB9_ORYSI Putative uncharacterized protein OS=Oryza... 63 1e-10 tr|Q9LEB4|Q9LEB4_NICPL RNA Binding Protein 45 OS=Nicotiana plumb... 63 2e-10 tr|Q0J7I6|Q0J7I6_ORYSJ Os08g0190200 protein OS=Oryza sativa subs... 63 2e-10 tr|Q6YZ94|Q6YZ94_ORYSJ Putative RNA Binding Protein 45 OS=Oryza ... 63 2e-10 tr|B4FEX6|B4FEX6_MAIZE Putative uncharacterized protein OS=Zea m... 58 9e-10 tr|A3AXL8|A3AXL8_ORYSJ Putative uncharacterized protein OS=Oryza... 63 1e-09 tr|Q0J9Y2|Q0J9Y2_ORYSJ Os04g0625800 protein OS=Oryza sativa subs... 63 1e-09 tr|A2XXT5|A2XXT5_ORYSI Putative uncharacterized protein OS=Oryza... 63 1e-09 tr|B4F9C9|B4F9C9_MAIZE Putative uncharacterized protein OS=Zea m... 62 1e-09 tr|Q7XM93|Q7XM93_ORYSA OSJNBb0060E08.6 protein (OSIGBa0148A10.8 ... 63 1e-09 tr|A9NX92|A9NX92_PICSI Putative uncharacterized protein OS=Picea... 61 2e-09 tr|B8LRZ2|B8LRZ2_PICSI Putative uncharacterized protein OS=Picea... 61 2e-09 tr|Q9FX88|Q9FX88_ARATH Putative RNA binding protein OS=Arabidops... 58 2e-09 tr|A7P9G1|A7P9G1_VITVI Chromosome chr3 scaffold_8, whole genome ... 59 2e-09
>tr|A7R0L9|A7R0L9_VITVI Chromosome chr10 scaffold_312, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00011496001 PE=4 SV=1 Length = 226
Score = 70.9 bits (172), Expect(3) = 1e-12 Identities = 28/38 (73%), Positives = 34/38 (89%) Frame = +3
Query: 279 PQNADDIRTLWVGDLQFWMDENYIASCFAHTGEVLNVK 392 P +AD++RTLW+GDLQ+WMDENYI CFAHTGEV +VK Sbjct: 9 PASADEVRTLWIGDLQYWMDENYINGCFAHTGEVTSVK 46
Score = 23.9 bits (50), Expect(3) = 1e-12 Identities = 8/11 (72%), Positives = 10/11 (90%) Frame = +2
Query: 422 LRGYGFVEFVS 454 L GYGF+EF+S Sbjct: 56 LEGYGFIEFIS 66
Score = 21.6 bits (44), Expect(3) = 1e-12 Identities = 9/14 (64%), Positives = 11/14 (78%) Frame = +1
Query: 388 LKIIRNKQTMASEG 429 +K+IRNKQT EG Sbjct: 45 VKLIRNKQTNQLEG 58
>tr|Q2PF40|Q2PF40_TRIPR Putative DNA binding protein OS=Trifolium pratense PE=2 SV=1 Length = 253
Score = 71.2 bits (173), Expect(3) = 1e-12 Identities = 28/40 (70%), Positives = 34/40 (85%) Frame = +3
Query: 273 PGPQNADDIRTLWVGDLQFWMDENYIASCFAHTGEVLNVK 392 P P AD++RTLW+GDLQ+WMDENY+ CF+HTGEV NVK Sbjct: 59 PQPATADEVRTLWIGDLQYWMDENYLYQCFSHTGEVGNVK 98
Score = 24.3 bits (51), Expect(3) = 1e-12 Identities = 10/14 (71%), Positives = 12/14 (85%) Frame = +1
Query: 388 LKIIRNKQTMASEG 429 +K+IRNKQT SEG Sbjct: 97 VKVIRNKQTNQSEG 110
Score = 20.4 bits (41), Expect(3) = 1e-12 Identities = 7/9 (77%), Positives = 8/9 (88%) Frame = +2
Query: 428 GYGFVEFVS 454 GYGF+EF S Sbjct: 110 GYGFLEFTS 118
>tr|A7NZS1|A7NZS1_VITVI Chromosome chr6 scaffold_3, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00024620001 PE=4 SV=1 Length = 440
Score = 67.8 bits (164), Expect(2) = 7e-12 Identities = 24/38 (63%), Positives = 35/38 (92%) Frame = +3
Query: 279 PQNADDIRTLWVGDLQFWMDENYIASCFAHTGEVLNVK 392 P + +++RTLW+GDLQ+W+DENY+ SCFAHTGEV+++K Sbjct: 34 PTSVEEVRTLWIGDLQYWVDENYLHSCFAHTGEVISIK 71
Score = 26.2 bits (56), Expect(2) = 7e-12 Identities = 10/10 (100%), Positives = 10/10 (100%) Frame = +2
Query: 428 GYGFVEFVSH 457 GYGFVEFVSH Sbjct: 83 GYGFVEFVSH 92
>tr|A9TZW4|A9TZW4_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_227053 PE=4 SV=1 Length = 453
Score = 62.8 bits (151), Expect(3) = 1e-11 Identities = 24/38 (63%), Positives = 33/38 (86%) Frame = +3
Query: 279 PQNADDIRTLWVGDLQFWMDENYIASCFAHTGEVLNVK 392 PQ+ ++++TLWVGDLQ+WMDENY+ + F HTGEV +VK Sbjct: 36 PQHHEEVKTLWVGDLQYWMDENYLHTAFVHTGEVQSVK 73
Score = 26.2 bits (56), Expect(3) = 1e-11 Identities = 10/10 (100%), Positives = 10/10 (100%) Frame = +2
Query: 428 GYGFVEFVSH 457 GYGFVEFVSH Sbjct: 85 GYGFVEFVSH 94
Score = 23.9 bits (50), Expect(3) = 1e-11 Identities = 11/14 (78%), Positives = 12/14 (85%) Frame = +1
Query: 388 LKIIRNKQTMASEG 429 +KIIRNKQT SEG Sbjct: 72 VKIIRNKQTGYSEG 85
>tr|A9TFH5|A9TFH5_PHYPA Predicted protein (Fragment) OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_2572 PE=4 SV=1 Length = 416
Score = 62.8 bits (151), Expect(3) = 1e-11 Identities = 24/38 (63%), Positives = 33/38 (86%) Frame = +3
Query: 279 PQNADDIRTLWVGDLQFWMDENYIASCFAHTGEVLNVK 392 PQ+ ++++TLWVGDLQ+WMDENY+ + F HTGEV +VK Sbjct: 1 PQSHEEVKTLWVGDLQYWMDENYLHTAFVHTGEVQSVK 38
Score = 26.2 bits (56), Expect(3) = 1e-11 Identities = 10/10 (100%), Positives = 10/10 (100%) Frame = +2
Query: 428 GYGFVEFVSH 457 GYGFVEFVSH Sbjct: 50 GYGFVEFVSH 59
Score = 23.9 bits (50), Expect(3) = 1e-11 Identities = 11/14 (78%), Positives = 12/14 (85%) Frame = +1
Query: 388 LKIIRNKQTMASEG 429 +KIIRNKQT SEG Sbjct: 37 VKIIRNKQTGYSEG 50
>tr|Q9SAB3|Q9SAB3_ARATH F25C20.21 protein (At1g11650) (Similar to gb|U90212 DNA binding protein ACBF from Nicotiana tabacum and contains 3 PF|00076 RNA recognition motif domains) OS=Arabidopsis thaliana GN=At1g11650 PE=2 SV=1 Length = 405
Score = 66.6 bits (161), Expect(3) = 1e-11 Identities = 25/38 (65%), Positives = 33/38 (86%) Frame = +3
Query: 279 PQNADDIRTLWVGDLQFWMDENYIASCFAHTGEVLNVK 392 P AD+IRTLW+GDLQ+WMDEN++ CFAHTGE+++ K Sbjct: 55 PTTADEIRTLWIGDLQYWMDENFLYGCFAHTGEMVSAK 92
Score = 24.6 bits (52), Expect(3) = 1e-11 Identities = 8/12 (66%), Positives = 10/12 (83%) Frame = +2
Query: 422 LRGYGFVEFVSH 457 + GYGF+EF SH Sbjct: 102 VEGYGFIEFASH 113
Score = 21.2 bits (43), Expect(3) = 1e-11 Identities = 9/13 (69%), Positives = 10/13 (76%) Frame = +1
Query: 391 KIIRNKQTMASEG 429 K+IRNKQT EG Sbjct: 92 KVIRNKQTGQVEG 104
>tr|Q8LBV8|Q8LBV8_ARATH Putative DNA binding protein OS=Arabidopsis thaliana PE=2 SV=1 Length = 404
Score = 66.6 bits (161), Expect(3) = 1e-11 Identities = 25/38 (65%), Positives = 33/38 (86%) Frame = +3
Query: 279 PQNADDIRTLWVGDLQFWMDENYIASCFAHTGEVLNVK 392 P AD+IRTLW+GDLQ+WMDEN++ CFAHTGE+++ K Sbjct: 54 PTTADEIRTLWIGDLQYWMDENFLYGCFAHTGEMVSAK 91
Score = 24.6 bits (52), Expect(3) = 1e-11 Identities = 8/12 (66%), Positives = 10/12 (83%) Frame = +2
Query: 422 LRGYGFVEFVSH 457 + GYGF+EF SH Sbjct: 101 VEGYGFIEFASH 112
Score = 21.2 bits (43), Expect(3) = 1e-11 Identities = 9/13 (69%), Positives = 10/13 (76%) Frame = +1
Query: 391 KIIRNKQTMASEG 429 K+IRNKQT EG Sbjct: 91 KVIRNKQTGQVEG 103
>tr|Q3EDE3|Q3EDE3_ARATH Uncharacterized protein At1g11650.1 OS=Arabidopsis thaliana GN=At1g11650 PE=4 SV=1 Length = 306
Score = 66.6 bits (161), Expect(3) = 1e-11 Identities = 25/38 (65%), Positives = 33/38 (86%) Frame = +3
Query: 279 PQNADDIRTLWVGDLQFWMDENYIASCFAHTGEVLNVK 392 P AD+IRTLW+GDLQ+WMDEN++ CFAHTGE+++ K Sbjct: 55 PTTADEIRTLWIGDLQYWMDENFLYGCFAHTGEMVSAK 92
Score = 24.6 bits (52), Expect(3) = 1e-11 Identities = 8/12 (66%), Positives = 10/12 (83%) Frame = +2
Query: 422 LRGYGFVEFVSH 457 + GYGF+EF SH Sbjct: 102 VEGYGFIEFASH 113
Score = 21.2 bits (43), Expect(3) = 1e-11 Identities = 9/13 (69%), Positives = 10/13 (76%) Frame = +1
Query: 391 KIIRNKQTMASEG 429 K+IRNKQT EG Sbjct: 92 KVIRNKQTGQVEG 104
>tr|B6UA93|B6UA93_MAIZE RNA-binding post-transcriptional regulator csx1 OS=Zea mays PE=2 SV=1 Length = 415
Score = 65.5 bits (158), Expect(3) = 2e-11 Identities = 25/38 (65%), Positives = 33/38 (86%) Frame = +3
Query: 279 PQNADDIRTLWVGDLQFWMDENYIASCFAHTGEVLNVK 392 P + +++RTLW+GDLQ+W DENY+ SCFAHTGEV +VK Sbjct: 8 PTSLEEVRTLWIGDLQYWTDENYLYSCFAHTGEVQSVK 45
Score = 25.8 bits (55), Expect(3) = 2e-11 Identities = 9/10 (90%), Positives = 10/10 (100%) Frame = +2
Query: 428 GYGFVEFVSH 457 GYGF+EFVSH Sbjct: 57 GYGFIEFVSH 66
Score = 20.4 bits (41), Expect(3) = 2e-11 Identities = 9/14 (64%), Positives = 10/14 (71%) Frame = +1
Query: 388 LKIIRNKQTMASEG 429 +KIIRNK T EG Sbjct: 44 VKIIRNKVTSLPEG 57
>tr|Q2PEV8|Q2PEV8_TRIPR Putative DNA binding protein (Fragment) OS=Trifolium pratense PE=2 SV=1 Length = 402
Score = 66.2 bits (160), Expect(2) = 6e-11 Identities = 25/38 (65%), Positives = 34/38 (89%) Frame = +3
Query: 279 PQNADDIRTLWVGDLQFWMDENYIASCFAHTGEVLNVK 392 P +AD++RTLW+GDLQ+WMDENY+ +CF +TGEV +VK Sbjct: 50 PASADEVRTLWIGDLQYWMDENYLYTCFGNTGEVTSVK 87
Score = 24.6 bits (52), Expect(2) = 6e-11 Identities = 10/14 (71%), Positives = 12/14 (85%) Frame = +1
Query: 388 LKIIRNKQTMASEG 429 +K+IRNKQT SEG Sbjct: 86 VKVIRNKQTSQSEG 99
|