DK955456
Clone id TST39A01NGRL0023_C08
Library
Length 598
Definition Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0023_C08. 5' end sequence.
Accession
Tissue type prothallia with plantlets
Developmental stage gametophytes with sporophytes
Contig ID
Sequence
GCCTTCCTCTTCCACCCGTTGGACTGGGCATTCTTTCCTGCAGCCTTCTTTTTCGCCATA
GCTTTTAGAATAGCATTCAGATCTCTAGACTTCTGTTGTTGTGGGCTTCGCGTTGATTGC
ATTGAGCTCCTTGATTTTTCGCTGGAGCTCTCCCTCGTAGTCGGGGTTGCAATCGGGGTT
TCGTTCTGTTGCCTTGCCATTCCAGATCGACCTGCCAGGGTGCAGTTCTCTGACTCTCGA
GCTGCTGCTTGCGCCTGGAGATTCTCATCACTCTGTTCTTTTCTACAGCAAAAAATCCAT
TAACCTTGTCTGGAGATTTGCCTTATGTGGAGAATCACCCATACGTGACTGCTCCATAGC
TCTGAAGTGAGAAGGTGCATGCGCATTGTGGTGTCATAGGTACTTCTCGCATCGAGGGCT
GCTATGGGTACTGCTGTACTTCTGCCGCATGACTGCTTGCGGAACACCAAAAGCAAGCAT
AAGGGCCATCTCTCTGAGGCAATTCTTCACTCTGATAGAGCTTACCGAGCAAGAAGAGAC
ACCCTTCAAGCATCTGTCTTAAGTGATCCACCGTCCACAGTATGCGGGGATCACGGAA
■■Homology search results ■■ -
sp_hit_id Q9I7U4
Definition sp|Q9I7U4|TITIN_DROME Titin OS=Drosophila melanogaster
Align length 44
Score (bit) 31.2
E-value 4.2
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK955456|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0023_C08, 5'
(598 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q9I7U4|TITIN_DROME Titin OS=Drosophila melanogaster GN=sls PE... 31 4.2
sp|Q8R368|DYXC1_MOUSE Dyslexia susceptibility 1 candidate gene 1... 30 7.1
sp|Q95K63|STOX2_MACFA Storkhead-box protein 2 OS=Macaca fascicul... 30 9.3
sp|Q9P2F5|STOX2_HUMAN Storkhead-box protein 2 OS=Homo sapiens GN... 30 9.3

>sp|Q9I7U4|TITIN_DROME Titin OS=Drosophila melanogaster GN=sls PE=1
SV=3
Length = 18141

Score = 31.2 bits (69), Expect = 4.2
Identities = 15/44 (34%), Positives = 25/44 (56%)
Frame = -1

Query: 295 FFAVEKNRVMRISRRKQQLESQRTAPWQVDLEWQGNRTKPRLQP 164
F E +M +S R ++LE+QR Q + W+ + +P+LQP
Sbjct: 5137 FITTEDVNIMHVSER-EKLEAQRLIREQQAVNWRQQQQRPQLQP 5179


>sp|Q8R368|DYXC1_MOUSE Dyslexia susceptibility 1 candidate gene 1
protein homolog OS=Mus musculus GN=Dyx1c1 PE=2 SV=1
Length = 420

Score = 30.4 bits (67), Expect = 7.1
Identities = 18/52 (34%), Positives = 29/52 (55%), Gaps = 1/52 (1%)
Frame = -2

Query: 156 EGELQRKIKELNAINAKPTTTEV*R-SECYSKSYGEKEGCRKECPVQRVEEE 4
E E ++KI+++ K T+E+ EC K+ G+K RKE P +R + E
Sbjct: 137 EEEERKKIEDMKENERKKATSELEAWKECQKKADGQKRVQRKEKPPERKQAE 188


>sp|Q95K63|STOX2_MACFA Storkhead-box protein 2 OS=Macaca
fascicularis GN=STOX2 PE=2 SV=1
Length = 926

Score = 30.0 bits (66), Expect = 9.3
Identities = 19/68 (27%), Positives = 30/68 (44%)
Frame = -2

Query: 516 IRVKNCLREMALMLAFGVPQAVMRQKYSSTHSSPRCEKYL*HHNAHAPSHFRAMEQSRMG 337
+ V+N +R ALM +A + SS H S R +K H +H S + + G
Sbjct: 322 LTVENVMRHTALMKKLEEEKAQRSKAGSSAHHSGRSKKSRTHRKSHGKSRSHSKTRVSKG 381

Query: 336 DSPHKANL 313
D ++L
Sbjct: 382 DPSDGSHL 389


>sp|Q9P2F5|STOX2_HUMAN Storkhead-box protein 2 OS=Homo sapiens
GN=STOX2 PE=2 SV=2
Length = 926

Score = 30.0 bits (66), Expect = 9.3
Identities = 19/68 (27%), Positives = 30/68 (44%)
Frame = -2

Query: 516 IRVKNCLREMALMLAFGVPQAVMRQKYSSTHSSPRCEKYL*HHNAHAPSHFRAMEQSRMG 337
+ V+N +R ALM +A + SS H S R +K H +H S + + G
Sbjct: 322 LTVENVMRHTALMKKLEEEKAQRSKAGSSAHHSGRSKKSRTHRKSHGKSRSHSKTRVSKG 381

Query: 336 DSPHKANL 313
D ++L
Sbjct: 382 DPSDGSHL 389


tr_hit_id B3JRJ2
Definition tr|B3JRJ2|B3JRJ2_9DELT GAF sensor signal transduction histidine kinase OS=Geobacter sp. M21
Align length 28
Score (bit) 33.5
E-value 9.6
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK955456|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0023_C08, 5'
(598 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|B3JRJ2|B3JRJ2_9DELT GAF sensor signal transduction histidine ... 33 9.6

>tr|B3JRJ2|B3JRJ2_9DELT GAF sensor signal transduction histidine
kinase OS=Geobacter sp. M21 GN=GM21DRAFT_0118 PE=4 SV=1
Length = 552

Score = 33.5 bits (75), Expect = 9.6
Identities = 13/28 (46%), Positives = 19/28 (67%)
Frame = -2

Query: 84 RSECYSKSYGEKEGCRKECPVQRVEEEG 1
R +C++K GE E CR CP+Q ++E G
Sbjct: 242 RKKCFAKMRGENEPCR-NCPIQEIKETG 268